Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89532.t1 | XP_013468408.1 | 98.7 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.00E+00 | 1496.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89532.t1 | Q9C0C7 | 37.0 | 211 | 116 | 7 | 45 | 251 | 7 | 204 | 8.2e-28 | 127.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89532.t1 | A0A072VWJ3 | 98.7 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.0e+00 | 1496.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049599 | MS.gene89532 | 0.829959 | 3.84E-55 | -1.69E-46 |
MS.gene049758 | MS.gene89532 | -0.806035 | 1.00E-49 | -1.69E-46 |
MS.gene050319 | MS.gene89532 | 0.812583 | 3.94E-51 | -1.69E-46 |
MS.gene050330 | MS.gene89532 | 0.805777 | 1.13E-49 | -1.69E-46 |
MS.gene050558 | MS.gene89532 | -0.813168 | 2.93E-51 | -1.69E-46 |
MS.gene050787 | MS.gene89532 | -0.830165 | 3.42E-55 | -1.69E-46 |
MS.gene05119 | MS.gene89532 | 0.83914 | 1.89E-57 | -1.69E-46 |
MS.gene051851 | MS.gene89532 | 0.825061 | 5.75E-54 | -1.69E-46 |
MS.gene053836 | MS.gene89532 | -0.833764 | 4.42E-56 | -1.69E-46 |
MS.gene054473 | MS.gene89532 | -0.826468 | 2.67E-54 | -1.69E-46 |
MS.gene054983 | MS.gene89532 | -0.803935 | 2.75E-49 | -1.69E-46 |
MS.gene055422 | MS.gene89532 | -0.802676 | 5.01E-49 | -1.69E-46 |
MS.gene055428 | MS.gene89532 | -0.8017 | 7.96E-49 | -1.69E-46 |
MS.gene056069 | MS.gene89532 | 0.83873 | 2.42E-57 | -1.69E-46 |
MS.gene059033 | MS.gene89532 | 0.963005 | 1.47E-121 | -1.69E-46 |
MS.gene05984 | MS.gene89532 | -0.8096 | 1.75E-50 | -1.69E-46 |
MS.gene061040 | MS.gene89532 | 0.826595 | 2.49E-54 | -1.69E-46 |
MS.gene061049 | MS.gene89532 | -0.812683 | 3.75E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene004739 | MS.gene89532 | PPI |
MS.gene89532 | MS.gene055332 | PPI |
MS.gene40034 | MS.gene89532 | PPI |
MS.gene32105 | MS.gene89532 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89532.t1 | MTR_1g069355 | 98.654 | 743 | 10 | 0 | 1 | 743 | 1 | 743 | 0.0 | 1518 |
MS.gene89532.t1 | MTR_1g069355 | 96.447 | 760 | 10 | 1 | 1 | 743 | 1 | 760 | 0.0 | 1508 |
MS.gene89532.t1 | MTR_7g099210 | 66.667 | 783 | 179 | 11 | 22 | 743 | 10 | 771 | 0.0 | 995 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89532.t1 | AT1G04140 | 54.293 | 757 | 297 | 12 | 29 | 741 | 32 | 783 | 0.0 | 771 |
MS.gene89532.t1 | AT1G04140 | 54.222 | 758 | 298 | 12 | 29 | 742 | 32 | 784 | 0.0 | 770 |
MS.gene89532.t1 | AT5G43930 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
MS.gene89532.t1 | AT5G43930 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
MS.gene89532.t1 | AT5G43930 | 55.850 | 718 | 273 | 11 | 28 | 729 | 34 | 723 | 0.0 | 746 |
MS.gene89532.t1 | AT5G43930 | 53.898 | 744 | 273 | 13 | 28 | 729 | 34 | 749 | 0.0 | 728 |
MS.gene89532.t1 | AT3G49660 | 28.571 | 182 | 116 | 7 | 105 | 277 | 78 | 254 | 3.81e-12 | 68.6 |
Find 195 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTTACCTGTAACTGATTT+TGG | 0.115003 | 1.1:+51017821 | MS.gene89532:CDS |
CATACCTGGTGTTGGAATTC+TGG | 0.178980 | 1.1:-51014143 | None:intergenic |
TTTCGTACATGCTTGTTTCT+AGG | 0.214459 | 1.1:-51015041 | None:intergenic |
TGGACCAAGAAGTTCGTTTA+TGG | 0.217778 | 1.1:+51016565 | MS.gene89532:CDS |
GACCGTGGGGCAGGCAATAA+AGG | 0.268914 | 1.1:-51015330 | None:intergenic |
AAGATCATTGATTGTGAAAC+TGG | 0.287636 | 1.1:+51015509 | MS.gene89532:CDS |
CTGAAAAGCATTGTCATTGA+TGG | 0.314557 | 1.1:+51019924 | MS.gene89532:CDS |
GAGCTAGCTGTGCCACCTTC+AGG | 0.320449 | 1.1:+51017731 | MS.gene89532:CDS |
GATACTTGCTAGTGGGAGTT+TGG | 0.320714 | 1.1:+51016545 | MS.gene89532:CDS |
AGCTGCAGTGGCCACTGATT+TGG | 0.321943 | 1.1:-51017924 | None:intergenic |
CGACTGGATTCGATTTATAA+TGG | 0.323236 | 1.1:-51017894 | None:intergenic |
TTTGATTAGGCAAAGTAGTA+TGG | 0.323889 | 1.1:-51017424 | None:intergenic |
ATGCCAATTCTCATTTGATT+AGG | 0.329540 | 1.1:-51017437 | None:intergenic |
GCACTGTTAACTTAAAAGTA+TGG | 0.343310 | 1.1:+51017963 | MS.gene89532:CDS |
CATCCCATAAACGAACTTCT+TGG | 0.352429 | 1.1:-51016569 | None:intergenic |
GGACCAAGAAGTTCGTTTAT+GGG | 0.353088 | 1.1:+51016566 | MS.gene89532:CDS |
CAACTGTGTTTGCAGTGAAA+TGG | 0.357749 | 1.1:+51018297 | MS.gene89532:intron |
AGGCAATGAGCAGCTCTAAT+TGG | 0.358191 | 1.1:-51018647 | None:intergenic |
TGACATGTTGATCTGCGTCC+TGG | 0.364210 | 1.1:-51017258 | None:intergenic |
CTCTCGCTTTCCATGCCAAT+GGG | 0.366859 | 1.1:+51016750 | MS.gene89532:CDS |
TTGCCTAATCAAATGAGAAT+TGG | 0.367098 | 1.1:+51017434 | MS.gene89532:CDS |
CAAAATCAGTTACAGGTAAA+CGG | 0.375548 | 1.1:-51017820 | None:intergenic |
ATACCTGGTGTTGGAATTCT+GGG | 0.377546 | 1.1:-51014142 | None:intergenic |
TATCAGATATGGAACTTGTC+AGG | 0.380466 | 1.1:+51020547 | MS.gene89532:CDS |
CATTACAAGTACGGTCAAAC+TGG | 0.380771 | 1.1:-51020747 | None:intergenic |
GAATCTTCTGAATCAAAATC+TGG | 0.390715 | 1.1:+51015077 | MS.gene89532:CDS |
GTTGGAATTCTGGGAGGATG+AGG | 0.392412 | 1.1:-51014133 | None:intergenic |
TTCCCTGAGGAGAACATGAT+TGG | 0.394808 | 1.1:+51020793 | MS.gene89532:CDS |
GGATTCGATTTATAATGGTT+TGG | 0.398188 | 1.1:-51017889 | None:intergenic |
GAAATAATTGCTGTTGCATC+AGG | 0.399592 | 1.1:+51016773 | MS.gene89532:CDS |
GTTCCGTCACCAGATTCTAA+TGG | 0.400356 | 1.1:+51017587 | MS.gene89532:CDS |
ACCTGAGCAGTTAAAAGATA+TGG | 0.402129 | 1.1:-51017036 | None:intergenic |
TCATGTTGGCTTGCTTCGGC+TGG | 0.407111 | 1.1:-51017503 | None:intergenic |
AGATTGCCAAAATCAGTTAC+AGG | 0.408627 | 1.1:-51017827 | None:intergenic |
CCTGGATCAGCTTCCATATG+AGG | 0.422073 | 1.1:-51018376 | None:intergenic |
ATTACTTGATGTGCTGAGAT+TGG | 0.422477 | 1.1:-51018454 | None:intergenic |
CCTCATATGGAAGCTGATCC+AGG | 0.426677 | 1.1:+51018376 | MS.gene89532:CDS |
GGTATATAGAGTATCAGATA+TGG | 0.427126 | 1.1:+51020536 | MS.gene89532:intron |
GCATCTTTGTAGTGGGGCGC+AGG | 0.430270 | 1.1:-51018005 | None:intergenic |
CTGATTTGGCAAGTTCCGAC+TGG | 0.435137 | 1.1:-51017910 | None:intergenic |
TCTATTAATTTGCCGCATGA+TGG | 0.442110 | 1.1:+51017857 | MS.gene89532:CDS |
AACTGTGTTTGCAGTGAAAT+GGG | 0.443834 | 1.1:+51018298 | MS.gene89532:intron |
ACTCCAATCATGTTCTCCTC+AGG | 0.445874 | 1.1:-51020796 | None:intergenic |
TTGGAATTCTGGGAGGATGA+GGG | 0.446295 | 1.1:-51014132 | None:intergenic |
CAAACCGGAGCAGAATATAA+TGG | 0.448038 | 1.1:+51017401 | MS.gene89532:CDS |
TCATGCGGCAAATTAATAGA+AGG | 0.456728 | 1.1:-51017854 | None:intergenic |
AGCATGTACGAAAGTGTCAC+TGG | 0.459638 | 1.1:+51015051 | MS.gene89532:CDS |
TGCATGTATGCACCCTCATA+TGG | 0.459866 | 1.1:+51018363 | MS.gene89532:CDS |
CGCGTTGAACTCTCTGAGCT+TGG | 0.460612 | 1.1:+51017548 | MS.gene89532:CDS |
CTTGTCTTCAACACAAATAC+TGG | 0.462774 | 1.1:-51016973 | None:intergenic |
AAAATCAGTTACAGGTAAAC+GGG | 0.463268 | 1.1:-51017819 | None:intergenic |
GAAGACAAGGCGCTCGCTAC+GGG | 0.464062 | 1.1:+51016987 | MS.gene89532:CDS |
ATCTGTTGAGGAAGCATTGA+GGG | 0.465688 | 1.1:-51017665 | None:intergenic |
AGCTCCCATCCATTAGAATC+TGG | 0.465836 | 1.1:-51017596 | None:intergenic |
AATTGCTTGAAGGTATTAGT+TGG | 0.468045 | 1.1:+51015533 | MS.gene89532:CDS |
TGTACAAGAGTTTGTAATCC+TGG | 0.469949 | 1.1:-51018394 | None:intergenic |
GGATGTCGAGTTGGTGATGT+TGG | 0.470361 | 1.1:-51018433 | None:intergenic |
AATGTGAATGGCACTGGATC+TGG | 0.470886 | 1.1:+51020766 | MS.gene89532:CDS |
TGGAAAGCGAGAGATGCAAT+AGG | 0.471210 | 1.1:-51016740 | None:intergenic |
TCAATGCTTCCTCAACAGAT+TGG | 0.475654 | 1.1:+51017668 | MS.gene89532:CDS |
AGTCGTACGTTGCTTCCTCC+AGG | 0.477811 | 1.1:-51018498 | None:intergenic |
TGAGCTCCGGATATATTCCC+TGG | 0.480311 | 1.1:+51018480 | MS.gene89532:CDS |
GGTTGTAGGAAGGAAAGCTT+AGG | 0.485120 | 1.1:+51020719 | MS.gene89532:intron |
CTATTAATTTGCCGCATGAT+GGG | 0.485445 | 1.1:+51017858 | MS.gene89532:CDS |
ACCGTGGGGCAGGCAATAAA+GGG | 0.486720 | 1.1:-51015329 | None:intergenic |
CTTCCTCCAGGGAATATATC+CGG | 0.487419 | 1.1:-51018486 | None:intergenic |
AAATTTGATTTCCAGGGTCG+AGG | 0.494344 | 1.1:+51015272 | MS.gene89532:intron |
TCATTGCCTGACTTCAATCC+AGG | 0.496863 | 1.1:+51018661 | MS.gene89532:CDS |
AACTGACCTGGATTGAAGTC+AGG | 0.498949 | 1.1:-51018667 | None:intergenic |
GACATGTTGATCTGCGTCCT+GGG | 0.499424 | 1.1:-51017257 | None:intergenic |
GGAAAATTCATACCTGGTGT+TGG | 0.500969 | 1.1:-51014151 | None:intergenic |
ATCATCAATATATACAGTCT+TGG | 0.501445 | 1.1:+51019956 | MS.gene89532:CDS |
ATCAAGTAATGTATGAGCTC+CGG | 0.501752 | 1.1:+51018467 | MS.gene89532:CDS |
ATGTTGGAAGTCCAGGCTCC+TGG | 0.502548 | 1.1:-51018417 | None:intergenic |
AGGCAATAAAGGGCAATACT+TGG | 0.503801 | 1.1:-51015319 | None:intergenic |
ATGAAGTTCCGCTGATTCCA+TGG | 0.504022 | 1.1:-51014091 | None:intergenic |
GTTGGTGATGTTGGAAGTCC+AGG | 0.505185 | 1.1:-51018424 | None:intergenic |
GGCATCAATAACCTCACAAT+GGG | 0.506104 | 1.1:+51017455 | MS.gene89532:CDS |
GCCCTTTATTGCCTGCCCCA+CGG | 0.507234 | 1.1:+51015328 | MS.gene89532:CDS |
AACAGCAATTATTTCCCCAT+TGG | 0.507326 | 1.1:-51016765 | None:intergenic |
GAGCATATTCTGCTCGCCTA+TGG | 0.507585 | 1.1:+51019882 | MS.gene89532:CDS |
ACTAACCATCCTTGCAGAAA+AGG | 0.507866 | 1.1:-51017620 | None:intergenic |
CAAAGTGTGGTCTCCTCTCA+TGG | 0.508856 | 1.1:+51015129 | MS.gene89532:CDS |
TGAAGACAAGGCGCTCGCTA+CGG | 0.509890 | 1.1:+51016986 | MS.gene89532:CDS |
TGCAGGTATGCTGATGCCAT+TGG | 0.509948 | 1.1:-51017759 | None:intergenic |
CAATTATTTCCCCATTGGCA+TGG | 0.510982 | 1.1:-51016760 | None:intergenic |
TTGGCCACAGAAGGACGCCT+TGG | 0.512523 | 1.1:+51015552 | MS.gene89532:CDS |
TGGCCACAGAAGGACGCCTT+GGG | 0.514365 | 1.1:+51015553 | MS.gene89532:CDS |
GCTTTCTAGTGCAGAGGATG+AGG | 0.517539 | 1.1:+51020572 | MS.gene89532:CDS |
ACTCTTGTACACCAGGAGCC+TGG | 0.517642 | 1.1:+51018406 | MS.gene89532:CDS |
AGAGCTATGACGTCGACCAT+AGG | 0.518312 | 1.1:-51019898 | None:intergenic |
TCTCTCGCTTTCCATGCCAA+TGG | 0.519282 | 1.1:+51016749 | MS.gene89532:CDS |
GACCGTACTTGTAATGTGAA+TGG | 0.523270 | 1.1:+51020754 | MS.gene89532:CDS |
GGAAAGCGAGAGATGCAATA+GGG | 0.526031 | 1.1:-51016739 | None:intergenic |
CGTCACCAGATTCTAATGGA+TGG | 0.526206 | 1.1:+51017591 | MS.gene89532:CDS |
CAGCATGCTAGTAACGATGT+TGG | 0.526306 | 1.1:+51017311 | MS.gene89532:CDS |
TTAGACGGCATCTTTGTAGT+GGG | 0.528947 | 1.1:-51018012 | None:intergenic |
TAACCTCACAATGGGTGGTA+GGG | 0.531061 | 1.1:+51017463 | MS.gene89532:CDS |
GTATCTGTCGTTGCAATGGA+TGG | 0.531769 | 1.1:-51016527 | None:intergenic |
GCAATAGTAGACCGTGGGGC+AGG | 0.533067 | 1.1:-51015339 | None:intergenic |
TTGTCACAAATGTTCATCCC+AGG | 0.536231 | 1.1:+51017240 | MS.gene89532:CDS |
TGCTCCGGTTTGAGAGCTAG+TGG | 0.536252 | 1.1:-51017390 | None:intergenic |
ATCAATATATACAGTCTTGG+AGG | 0.536387 | 1.1:+51019959 | MS.gene89532:CDS |
TACCACATGTCGTCCTCTGC+AGG | 0.539111 | 1.1:+51018038 | MS.gene89532:CDS |
GCTGCAGCATTTAGTCCAGA+TGG | 0.539276 | 1.1:+51015360 | MS.gene89532:CDS |
TGAAACTGGAAATTGCTTGA+AGG | 0.539434 | 1.1:+51015523 | MS.gene89532:CDS |
AGGTATTAGTTGGCCACAGA+AGG | 0.539720 | 1.1:+51015543 | MS.gene89532:CDS |
TTGGTGGTGAACAGATTAGA+TGG | 0.541889 | 1.1:-51017704 | None:intergenic |
ATGGCCATTATATTCTGCTC+CGG | 0.541908 | 1.1:-51017405 | None:intergenic |
CCACCCAAGGCGTCCTTCTG+TGG | 0.544228 | 1.1:-51015556 | None:intergenic |
ACTTGTAATGTGAATGGCAC+TGG | 0.544885 | 1.1:+51020760 | MS.gene89532:CDS |
GCAGGTATGCTGATGCCATT+GGG | 0.544979 | 1.1:-51017758 | None:intergenic |
CACAGCTAGCTCAACATTGG+TGG | 0.546180 | 1.1:-51017720 | None:intergenic |
AAAGATATGGTGCCCCATGC+GGG | 0.547922 | 1.1:-51017023 | None:intergenic |
TTGAGAGCTAGTGGGTATCT+CGG | 0.549485 | 1.1:-51017381 | None:intergenic |
GCAAGTATCTGTCGTTGCAA+TGG | 0.550367 | 1.1:-51016531 | None:intergenic |
ATGACAGAGGCAACATCTCA+TGG | 0.552996 | 1.1:+51017188 | MS.gene89532:CDS |
ATCAATAACCTCACAATGGG+TGG | 0.553944 | 1.1:+51017458 | MS.gene89532:CDS |
CAGGGTGCTTTCTAGTGCAG+AGG | 0.555084 | 1.1:+51020566 | MS.gene89532:CDS |
ATAACCTCACAATGGGTGGT+AGG | 0.558003 | 1.1:+51017462 | MS.gene89532:CDS |
GTCACCAGATTCTAATGGAT+GGG | 0.560045 | 1.1:+51017592 | MS.gene89532:CDS |
GCATTGAGGGAACACCAACT+TGG | 0.562253 | 1.1:-51017652 | None:intergenic |
CATCTTTGTAGTGGGGCGCA+GGG | 0.564972 | 1.1:-51018004 | None:intergenic |
GTTAGACGGCATCTTTGTAG+TGG | 0.565047 | 1.1:-51018013 | None:intergenic |
CAGTATTTGTGTTGAAGACA+AGG | 0.566784 | 1.1:+51016974 | MS.gene89532:CDS |
TGCCATTCACATTACAAGTA+CGG | 0.568037 | 1.1:-51020756 | None:intergenic |
TTTCTGCAAGGATGGTTAGT+CGG | 0.570950 | 1.1:+51017623 | MS.gene89532:CDS |
CTCCAATCATGTTCTCCTCA+GGG | 0.571222 | 1.1:-51020795 | None:intergenic |
ATGCCATTGGGCATTCCTGA+AGG | 0.574190 | 1.1:-51017746 | None:intergenic |
CTGCAGCATTTAGTCCAGAT+GGG | 0.574217 | 1.1:+51015361 | MS.gene89532:CDS |
AAGCCAAAGCTTACCACCCA+AGG | 0.576210 | 1.1:-51015569 | None:intergenic |
AAACCTGATTGTAAAACTGC+AGG | 0.577206 | 1.1:-51017776 | None:intergenic |
ATACCCACTAGCTCTCAAAC+CGG | 0.582499 | 1.1:+51017386 | MS.gene89532:CDS |
CTGTTCTCGTTCTAGAACAG+TGG | 0.583294 | 1.1:+51015100 | MS.gene89532:CDS |
CTGCAGCAATAGTAGACCGT+GGG | 0.583872 | 1.1:-51015344 | None:intergenic |
TGCTGTTGCATCAGGTCACA+AGG | 0.586241 | 1.1:+51016781 | MS.gene89532:CDS |
GTGAAAGAACCAATCTGTTG+AGG | 0.587730 | 1.1:-51017677 | None:intergenic |
CTGGATCAGCTTCCATATGA+GGG | 0.589361 | 1.1:-51018375 | None:intergenic |
TGATTCCATGGAAAATTCCA+TGG | 0.590591 | 1.1:-51014079 | None:intergenic |
TGTTGGTTTGAGTAGCATGC+AGG | 0.590711 | 1.1:+51017328 | MS.gene89532:CDS |
AATTCAACTCTTGACACTGG+TGG | 0.591913 | 1.1:-51017287 | None:intergenic |
TAATTCTGTAGCAGCTGCAG+TGG | 0.593424 | 1.1:-51017936 | None:intergenic |
GCTCCGGTTTGAGAGCTAGT+GGG | 0.596135 | 1.1:-51017389 | None:intergenic |
TCTGGTGACGGAACAATCTG+AGG | 0.598901 | 1.1:-51017578 | None:intergenic |
CCTCCCAGAATTCCAACACC+AGG | 0.599555 | 1.1:+51014139 | MS.gene89532:CDS |
CGACATGTGGTATAGTTAGA+CGG | 0.600026 | 1.1:-51018027 | None:intergenic |
ATCAGATATGGAACTTGTCA+GGG | 0.600976 | 1.1:+51020548 | MS.gene89532:CDS |
AAAAGATATGGTGCCCCATG+CGG | 0.601223 | 1.1:-51017024 | None:intergenic |
GTCGTACGTTGCTTCCTCCA+GGG | 0.604411 | 1.1:-51018497 | None:intergenic |
CCTCACAATGGGTGGTAGGG+AGG | 0.605498 | 1.1:+51017466 | MS.gene89532:CDS |
AGCAGAATATGCTCAGATGT+AGG | 0.609510 | 1.1:-51019873 | None:intergenic |
ATTACAAACTCTTGTACACC+AGG | 0.610235 | 1.1:+51018399 | MS.gene89532:CDS |
TCATTTAGAATATCCTCCAC+CGG | 0.610636 | 1.1:+51017211 | MS.gene89532:CDS |
AGCATGCAGGTTGAACAATA+CGG | 0.618359 | 1.1:+51017341 | MS.gene89532:CDS |
CCACAGAAGGACGCCTTGGG+TGG | 0.618769 | 1.1:+51015556 | MS.gene89532:CDS |
GCATGTACGAAAGTGTCACT+GGG | 0.618857 | 1.1:+51015052 | MS.gene89532:CDS |
CCACCTTCAGGAATGCCCAA+TGG | 0.620224 | 1.1:+51017743 | MS.gene89532:CDS |
CATTATAAATCGAATCCAGT+CGG | 0.622471 | 1.1:+51017895 | MS.gene89532:CDS |
TGGCACAGCTAGCTCAACAT+TGG | 0.624707 | 1.1:-51017723 | None:intergenic |
GTCGGAACTTGCCAAATCAG+TGG | 0.625008 | 1.1:+51017913 | MS.gene89532:CDS |
AATCTGTTGAGGAAGCATTG+AGG | 0.627493 | 1.1:-51017666 | None:intergenic |
CCATTGGGCATTCCTGAAGG+TGG | 0.630429 | 1.1:-51017743 | None:intergenic |
TGGCATCAATAACCTCACAA+TGG | 0.635026 | 1.1:+51017454 | MS.gene89532:CDS |
TCAGTTACAGGTAAACGGGA+TGG | 0.636538 | 1.1:-51017815 | None:intergenic |
AACGACAGATACTTGCTAGT+GGG | 0.637390 | 1.1:+51016538 | MS.gene89532:CDS |
GCTGAGATTGGATGTCGAGT+TGG | 0.638438 | 1.1:-51018442 | None:intergenic |
CAACGACAGATACTTGCTAG+TGG | 0.639744 | 1.1:+51016537 | MS.gene89532:CDS |
TGCAATTCAACTCTTGACAC+TGG | 0.641673 | 1.1:-51017290 | None:intergenic |
TTCAGATTGCTCAATGACAG+AGG | 0.641679 | 1.1:+51017175 | MS.gene89532:CDS |
ACTTCAGAAGGTACCTGCAG+AGG | 0.645206 | 1.1:-51018051 | None:intergenic |
AGTTGTGTAAGTACCATGAG+AGG | 0.649049 | 1.1:-51015142 | None:intergenic |
TACTGTGTCAGTTGTACGTG+TGG | 0.650194 | 1.1:+51016920 | MS.gene89532:intron |
TAGACGGCATCTTTGTAGTG+GGG | 0.650831 | 1.1:-51018011 | None:intergenic |
AATTGCAACTTACTGTGTGG+AGG | 0.655631 | 1.1:-51015394 | None:intergenic |
GTTGTAGGAAGGAAAGCTTA+GGG | 0.656714 | 1.1:+51020720 | MS.gene89532:intron |
CCTCCCTACCACCCATTGTG+AGG | 0.659125 | 1.1:-51017466 | None:intergenic |
CATCCATTAGAATCTGGTGA+CGG | 0.670518 | 1.1:-51017590 | None:intergenic |
TTAGTCGGTCAAAGCCAAGT+TGG | 0.670959 | 1.1:+51017638 | MS.gene89532:CDS |
TACCTGCAGAGGACGACATG+TGG | 0.671719 | 1.1:-51018040 | None:intergenic |
TGCAGAGGATGAGGTCAATG+TGG | 0.674617 | 1.1:+51020581 | MS.gene89532:CDS |
GCTGCAGCAATAGTAGACCG+TGG | 0.674851 | 1.1:-51015345 | None:intergenic |
AGGGTGCATACATGCAACAC+AGG | 0.677223 | 1.1:-51018356 | None:intergenic |
TGGCTATCAAACCCATCATG+CGG | 0.678387 | 1.1:-51017869 | None:intergenic |
GTGCATACATGCAACACAGG+CGG | 0.681773 | 1.1:-51018353 | None:intergenic |
TCTCGCTTTCCATGCCAATG+GGG | 0.682220 | 1.1:+51016751 | MS.gene89532:CDS |
AATCAATGATCTTAACTGTG+TGG | 0.684417 | 1.1:-51015499 | None:intergenic |
AGGGCTTGTCTATGGAACCA+AGG | 0.695022 | 1.1:+51020629 | MS.gene89532:CDS |
GGGATGCTAGCTCATCAGAG+TGG | 0.698330 | 1.1:+51016586 | MS.gene89532:CDS |
TGGATCTGGTTACTTCCCTG+AGG | 0.705098 | 1.1:+51020780 | MS.gene89532:CDS |
ACAGTGGTAGATGCAAAGTG+TGG | 0.719121 | 1.1:+51015116 | MS.gene89532:CDS |
TGCAGCAATAGTAGACCGTG+GGG | 0.726709 | 1.1:-51015343 | None:intergenic |
GAGGGTTGATCATGACACAG+AGG | 0.745622 | 1.1:-51014114 | None:intergenic |
GCTCCGGATATATTCCCTGG+AGG | 0.749636 | 1.1:+51018483 | MS.gene89532:CDS |
CCTGGTGTTGGAATTCTGGG+AGG | 0.755260 | 1.1:-51014139 | None:intergenic |
CATGTACGAAAGTGTCACTG+GGG | 0.771233 | 1.1:+51015053 | MS.gene89532:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTTATTTTTAAATTT+GGG | + | chr1.1:51014972-51014991 | MS.gene89532:intron | 0.0% |
!!! | TTTATTTTTATTTTTAAATT+TGG | + | chr1.1:51014971-51014990 | MS.gene89532:intron | 0.0% |
!! | AACTTAAAAAAAAAATACTT+AGG | - | chr1.1:51014292-51014311 | None:intergenic | 10.0% |
!! | TATAATCTCTATATAATTAT+TGG | + | chr1.1:51020327-51020346 | MS.gene89532:intron | 10.0% |
!! | AAAATAGAAATATGATTATG+AGG | - | chr1.1:51019494-51019513 | None:intergenic | 15.0% |
!! | AAAATTACTTCAAAATACTT+AGG | - | chr1.1:51014489-51014508 | None:intergenic | 15.0% |
!! | AATAACCACATAATTATTTA+GGG | - | chr1.1:51014403-51014422 | None:intergenic | 15.0% |
!! | ATATAAAACTATTATTCACT+TGG | - | chr1.1:51015666-51015685 | None:intergenic | 15.0% |
!! | CTCAAAATAAAATAAAAAAG+AGG | + | chr1.1:51018820-51018839 | MS.gene89532:intron | 15.0% |
!! | TAAAAATAAAAAATCATGTG+AGG | - | chr1.1:51014961-51014980 | None:intergenic | 15.0% |
!! | TAATAACCACATAATTATTT+AGG | - | chr1.1:51014404-51014423 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAAGGTTTA+AGG | - | chr1.1:51018918-51018937 | None:intergenic | 15.0% |
!!! | AATCAAAAAATTACTTTTCT+TGG | + | chr1.1:51019808-51019827 | MS.gene89532:intron | 15.0% |
!!! | AATGCACTTATTTTTTTTTA+TGG | + | chr1.1:51020204-51020223 | MS.gene89532:intron | 15.0% |
!!! | ATAAATTTTAATGATATGCT+TGG | - | chr1.1:51018580-51018599 | None:intergenic | 15.0% |
!!! | ATCATTTTTTACAAGTTAAT+TGG | + | chr1.1:51014597-51014616 | MS.gene89532:intron | 15.0% |
!!! | ATGCACTTATTTTTTTTTAT+GGG | + | chr1.1:51020205-51020224 | MS.gene89532:intron | 15.0% |
!!! | ATTTTTAAATTTGATTTCCA+GGG | + | chr1.1:51015266-51015285 | MS.gene89532:intron | 15.0% |
!!! | CTATAAAAACTATTACTTTT+TGG | + | chr1.1:51017097-51017116 | MS.gene89532:intron | 15.0% |
!!! | CTCTTTTTTATTTTATTTTG+AGG | - | chr1.1:51018822-51018841 | None:intergenic | 15.0% |
!!! | GAATACATTATTCTTTTTTT+GGG | + | chr1.1:51018747-51018766 | MS.gene89532:intron | 15.0% |
!!! | TATTTTGTTTAATTGTGATT+TGG | + | chr1.1:51016891-51016910 | MS.gene89532:intron | 15.0% |
!!! | TCATTTTTTACAAGTTAATT+GGG | + | chr1.1:51014598-51014617 | MS.gene89532:intron | 15.0% |
!!! | TGAATACATTATTCTTTTTT+TGG | + | chr1.1:51018746-51018765 | MS.gene89532:intron | 15.0% |
!! | AAAAGAAATGAAAAGGAAAA+AGG | - | chr1.1:51015610-51015629 | None:intergenic | 20.0% |
!! | AAAGTTGTTATAGAAATGTT+TGG | + | chr1.1:51018226-51018245 | MS.gene89532:intron | 20.0% |
!! | AAATAGGTAAGTAAACTATT+AGG | - | chr1.1:51019717-51019736 | None:intergenic | 20.0% |
!! | AATAAACTAATTGATCAAGT+CGG | - | chr1.1:51015763-51015782 | None:intergenic | 20.0% |
!! | AATGTGATTAACAATAGAAA+AGG | - | chr1.1:51016652-51016671 | None:intergenic | 20.0% |
!! | ATATATCTCATCAAACTTAA+TGG | - | chr1.1:51015981-51016000 | None:intergenic | 20.0% |
!! | ATATGAAAGTAATGAAAATC+TGG | + | chr1.1:51019048-51019067 | MS.gene89532:intron | 20.0% |
!! | ATGCTGAACATAAATTAAAA+AGG | - | chr1.1:51019460-51019479 | None:intergenic | 20.0% |
!! | ATGTGATTAACAATAGAAAA+GGG | - | chr1.1:51016651-51016670 | None:intergenic | 20.0% |
!! | GAATATTAACAAAGAAGATA+TGG | - | chr1.1:51014175-51014194 | None:intergenic | 20.0% |
!! | TAAAACACAAACAAATTCAA+AGG | - | chr1.1:51020516-51020535 | None:intergenic | 20.0% |
!! | TAAGGATAATTAATCCAAAT+TGG | - | chr1.1:51018900-51018919 | None:intergenic | 20.0% |
!! | TAATACTTCCATTAAATTAG+AGG | - | chr1.1:51020130-51020149 | None:intergenic | 20.0% |
!! | TCTAAATACCTCTAATTTAA+TGG | + | chr1.1:51020119-51020138 | MS.gene89532:intron | 20.0% |
!! | TGCTAAAAAATTCAAAATTG+TGG | - | chr1.1:51018986-51019005 | None:intergenic | 20.0% |
!! | TTAAACCCTAAATAATTATG+TGG | + | chr1.1:51014395-51014414 | MS.gene89532:intron | 20.0% |
!!! | ATTTGGAATAATGTGTTAAT+CGG | + | chr1.1:51016490-51016509 | MS.gene89532:intron | 20.0% |
!!! | ATTTTTGTGTCAAAAAAACA+AGG | - | chr1.1:51019299-51019318 | None:intergenic | 20.0% |
!!! | CATTTTTAAATTTGATTTCC+AGG | + | chr1.1:51015265-51015284 | MS.gene89532:intron | 20.0% |
!!! | GATAATTTTAGATTGAGAAA+AGG | - | chr1.1:51019998-51020017 | None:intergenic | 20.0% |
!!! | GTTAAATTTTGAAGTTGAAT+TGG | + | chr1.1:51014462-51014481 | MS.gene89532:intron | 20.0% |
!!! | TACATTTCTTTTAACAGATT+TGG | + | chr1.1:51018605-51018624 | MS.gene89532:intron | 20.0% |
!!! | TTACTTAACTTCCTTTTATT+AGG | - | chr1.1:51015900-51015919 | None:intergenic | 20.0% |
!!! | TTACTTTCATATTGAACTTT+TGG | - | chr1.1:51019040-51019059 | None:intergenic | 20.0% |
!!! | TTGATTCTTTTGTACTTTTT+GGG | + | chr1.1:51016283-51016302 | MS.gene89532:intron | 20.0% |
!!! | TTGTTTTTATAGTCTTCATT+TGG | + | chr1.1:51016473-51016492 | MS.gene89532:intron | 20.0% |
!!! | TTTGAATTTGTTTGTGTTTT+AGG | + | chr1.1:51020515-51020534 | MS.gene89532:intron | 20.0% |
!!! | TTTGATTCTTTTGTACTTTT+TGG | + | chr1.1:51016282-51016301 | MS.gene89532:intron | 20.0% |
!!! | TTTTTGTGTCAAAAAAACAA+GGG | - | chr1.1:51019298-51019317 | None:intergenic | 20.0% |
! | AAATATGATTATGAGGATTG+AGG | - | chr1.1:51019487-51019506 | None:intergenic | 25.0% |
! | AAATTCACAATAAACAAGGT+GGG | - | chr1.1:51014910-51014929 | None:intergenic | 25.0% |
! | AACAATAATGAATTCGACAT+TGG | - | chr1.1:51014864-51014883 | None:intergenic | 25.0% |
! | AATATGATTATGAGGATTGA+GGG | - | chr1.1:51019486-51019505 | None:intergenic | 25.0% |
! | AATCATTAATCAACAACAAC+AGG | - | chr1.1:51015794-51015813 | None:intergenic | 25.0% |
! | ACTGTATTGTTTAACATTGT+AGG | + | chr1.1:51019370-51019389 | MS.gene89532:intron | 25.0% |
! | AGTTAATTTACTTTATCACC+TGG | + | chr1.1:51018686-51018705 | MS.gene89532:intron | 25.0% |
! | ATAAACTCAACTCCATAAAT+TGG | - | chr1.1:51016016-51016035 | None:intergenic | 25.0% |
! | ATAAAGTAAATTAACTGACC+TGG | - | chr1.1:51018682-51018701 | None:intergenic | 25.0% |
! | ATAATTATTGGTCAACAAGT+AGG | + | chr1.1:51020339-51020358 | MS.gene89532:intron | 25.0% |
! | ATACATATGATATTCGATTC+TGG | + | chr1.1:51014213-51014232 | MS.gene89532:intron | 25.0% |
! | ATACATGTTAACTTAACAGT+AGG | + | chr1.1:51019160-51019179 | MS.gene89532:intron | 25.0% |
! | ATCATCAATATATACAGTCT+TGG | + | chr1.1:51019956-51019975 | MS.gene89532:CDS | 25.0% |
! | CTTCAAATTCACAATAAACA+AGG | - | chr1.1:51014914-51014933 | None:intergenic | 25.0% |
! | GGGATGATAACAAAAAAAAT+TGG | + | chr1.1:51014618-51014637 | MS.gene89532:intron | 25.0% |
! | GGTATAAATTATACACTGAA+CGG | - | chr1.1:51015173-51015192 | None:intergenic | 25.0% |
! | GTTTGTATTACACAAACAAA+AGG | + | chr1.1:51019655-51019674 | MS.gene89532:intron | 25.0% |
! | TACATGTTAACTTAACAGTA+GGG | + | chr1.1:51019161-51019180 | MS.gene89532:intron | 25.0% |
! | TATGTGGTTATTAATTCTCA+GGG | + | chr1.1:51014411-51014430 | MS.gene89532:intron | 25.0% |
! | TGGTATAAAATTGAATGCAA+CGG | - | chr1.1:51016174-51016193 | None:intergenic | 25.0% |
! | TGTGATTAACAATAGAAAAG+GGG | - | chr1.1:51016650-51016669 | None:intergenic | 25.0% |
! | TTAAGTAAGAAATCTGTACT+GGG | + | chr1.1:51015912-51015931 | MS.gene89532:intron | 25.0% |
! | TTAATGTTTAGTTGTTGTGT+TGG | + | chr1.1:51020378-51020397 | MS.gene89532:intron | 25.0% |
! | TTATGTGGTTATTAATTCTC+AGG | + | chr1.1:51014410-51014429 | MS.gene89532:intron | 25.0% |
! | TTCTCATATTCTGTAACTAT+GGG | - | chr1.1:51016398-51016417 | None:intergenic | 25.0% |
! | TTCTCTTTGATGAACTTAAT+GGG | + | chr1.1:51016700-51016719 | MS.gene89532:intron | 25.0% |
! | TTGTTTGTGTAATACAAACA+AGG | - | chr1.1:51019654-51019673 | None:intergenic | 25.0% |
! | TTTCTCTTTGATGAACTTAA+TGG | + | chr1.1:51016699-51016718 | MS.gene89532:intron | 25.0% |
!! | AAATTCGTGTATTTTTCATC+CGG | - | chr1.1:51014645-51014664 | None:intergenic | 25.0% |
!! | ATTGAATTTTTGTGTGCTTT+TGG | + | chr1.1:51015461-51015480 | MS.gene89532:intron | 25.0% |
!! | GTTTTGCTTACAATCAAATT+TGG | + | chr1.1:51020283-51020302 | MS.gene89532:intron | 25.0% |
!! | TTAACTTCCTTTTATTAGGA+CGG | - | chr1.1:51015896-51015915 | None:intergenic | 25.0% |
!! | TTAAGTTAGCTGAGATTTTT+AGG | + | chr1.1:51014361-51014380 | MS.gene89532:intron | 25.0% |
!! | TTCTTTTAACAGATTTGGAT+CGG | + | chr1.1:51018610-51018629 | MS.gene89532:intron | 25.0% |
!! | TTGTTTAATTGTGATTTGGA+TGG | + | chr1.1:51016895-51016914 | MS.gene89532:intron | 25.0% |
!!! | CAAAAAATTACTTTTCTTGG+TGG | + | chr1.1:51019811-51019830 | MS.gene89532:intron | 25.0% |
!!! | CAAAAGGCTTTGTTTTTATT+CGG | - | chr1.1:51015194-51015213 | None:intergenic | 25.0% |
!!! | TTATTTTTAAATTTGGGCAG+TGG | + | chr1.1:51014978-51014997 | MS.gene89532:intron | 25.0% |
!!! | TTCTTTTTTGTCACCATATT+TGG | + | chr1.1:51017123-51017142 | MS.gene89532:intron | 25.0% |
!!! | TTGTAAAGTGAGTTTGATTT+TGG | + | chr1.1:51016210-51016229 | MS.gene89532:intron | 25.0% |
AAAATCAGTTACAGGTAAAC+GGG | - | chr1.1:51017822-51017841 | None:intergenic | 30.0% | |
AAAGAGTCTGTGATTCAAAT+TGG | - | chr1.1:51015438-51015457 | None:intergenic | 30.0% | |
AAATACATGAATGAGATGAC+TGG | - | chr1.1:51020455-51020474 | None:intergenic | 30.0% | |
AACATAGACTGATTACTTGA+TGG | + | chr1.1:51018186-51018205 | MS.gene89532:intron | 30.0% | |
AATACATGAATGAGATGACT+GGG | - | chr1.1:51020454-51020473 | None:intergenic | 30.0% | |
AATCAATGATCTTAACTGTG+TGG | - | chr1.1:51015502-51015521 | None:intergenic | 30.0% | |
AGATATGGAAAATTCATACC+TGG | - | chr1.1:51014160-51014179 | None:intergenic | 30.0% | |
ATCAATATATACAGTCTTGG+AGG | + | chr1.1:51019959-51019978 | MS.gene89532:CDS | 30.0% | |
ATGCCAATTCTCATTTGATT+AGG | - | chr1.1:51017440-51017459 | None:intergenic | 30.0% | |
ATGTTGTTGAATGATTGTTG+AGG | + | chr1.1:51014714-51014733 | MS.gene89532:intron | 30.0% | |
ATTAAACTCGTTGACAACTT+AGG | + | chr1.1:51014737-51014756 | MS.gene89532:intron | 30.0% | |
CAAAATCAGTTACAGGTAAA+CGG | - | chr1.1:51017823-51017842 | None:intergenic | 30.0% | |
CAAACAAAAGGTAAATCCAT+TGG | + | chr1.1:51019667-51019686 | MS.gene89532:intron | 30.0% | |
CAAATTCACAATAAACAAGG+TGG | - | chr1.1:51014911-51014930 | None:intergenic | 30.0% | |
CATTATAAATCGAATCCAGT+CGG | + | chr1.1:51017895-51017914 | MS.gene89532:CDS | 30.0% | |
CCAGACAAAAAGAAATGAAA+AGG | - | chr1.1:51015617-51015636 | None:intergenic | 30.0% | |
GAATCTTCTGAATCAAAATC+TGG | + | chr1.1:51015077-51015096 | MS.gene89532:CDS | 30.0% | |
GAATTCATTATTGTTAGCTG+TGG | + | chr1.1:51014869-51014888 | MS.gene89532:intron | 30.0% | |
GAGCTCAAAAATTGATTACT+AGG | - | chr1.1:51019075-51019094 | None:intergenic | 30.0% | |
GATAACAAAAAAAATTGGCC+CGG | + | chr1.1:51014623-51014642 | MS.gene89532:intron | 30.0% | |
GATAACAATTATAGTGCCAA+TGG | - | chr1.1:51019686-51019705 | None:intergenic | 30.0% | |
GCACTGTTAACTTAAAAGTA+TGG | + | chr1.1:51017963-51017982 | MS.gene89532:CDS | 30.0% | |
GGATTCGATTTATAATGGTT+TGG | - | chr1.1:51017892-51017911 | None:intergenic | 30.0% | |
GTAATACAAACAAGGACAAA+AGG | - | chr1.1:51019646-51019665 | None:intergenic | 30.0% | |
GTTAAGTAAGAAATCTGTAC+TGG | + | chr1.1:51015911-51015930 | MS.gene89532:intron | 30.0% | |
GTTCTCATATTCTGTAACTA+TGG | - | chr1.1:51016399-51016418 | None:intergenic | 30.0% | |
TACTAGCAACAATTGTTGAA+AGG | - | chr1.1:51018527-51018546 | None:intergenic | 30.0% | |
TGCAACTTCAAGACAAAAAT+AGG | - | chr1.1:51019733-51019752 | None:intergenic | 30.0% | |
TTAAACTCGTTGACAACTTA+GGG | + | chr1.1:51014738-51014757 | MS.gene89532:intron | 30.0% | |
TTGCATAATTTACATCAACC+AGG | - | chr1.1:51018707-51018726 | None:intergenic | 30.0% | |
TTGCCTAATCAAATGAGAAT+TGG | + | chr1.1:51017434-51017453 | MS.gene89532:CDS | 30.0% | |
TTTCTCGTGCTCATAAAAAA+AGG | - | chr1.1:51019235-51019254 | None:intergenic | 30.0% | |
TTTGATTAGGCAAAGTAGTA+TGG | - | chr1.1:51017427-51017446 | None:intergenic | 30.0% | |
! | AAGATCATTGATTGTGAAAC+TGG | + | chr1.1:51015509-51015528 | MS.gene89532:CDS | 30.0% |
! | AATTCGTGTATTTTTCATCC+GGG | - | chr1.1:51014644-51014663 | None:intergenic | 30.0% |
! | AGTTATTTGAACTTAGCTTG+AGG | + | chr1.1:51014542-51014561 | MS.gene89532:intron | 30.0% |
! | ATGAAAGCAGGTAATTTTCA+AGG | - | chr1.1:51018792-51018811 | None:intergenic | 30.0% |
! | ATGTATGGTGGGAATAAATA+TGG | - | chr1.1:51014816-51014835 | None:intergenic | 30.0% |
! | ATTTTTGTCTTGAAGTTGCA+TGG | + | chr1.1:51019733-51019752 | MS.gene89532:intron | 30.0% |
! | CATTCTAAAAATGTCGTTCA+TGG | - | chr1.1:51020188-51020207 | None:intergenic | 30.0% |
! | CCTTTTCATTTCTTTTTGTC+TGG | + | chr1.1:51015614-51015633 | MS.gene89532:intron | 30.0% |
! | GGTATATAGAGTATCAGATA+TGG | + | chr1.1:51020536-51020555 | MS.gene89532:intron | 30.0% |
! | GTTATTTGAACTTAGCTTGA+GGG | + | chr1.1:51014543-51014562 | MS.gene89532:intron | 30.0% |
! | TAACTTCCTTTTATTAGGAC+GGG | - | chr1.1:51015895-51015914 | None:intergenic | 30.0% |
! | TAATTGACTTTCCTAGAGAA+AGG | - | chr1.1:51015235-51015254 | None:intergenic | 30.0% |
! | TGAAAGCAGGTAATTTTCAA+GGG | - | chr1.1:51018791-51018810 | None:intergenic | 30.0% |
! | TGAATTTGTTTCCTTTCTCT+AGG | + | chr1.1:51015221-51015240 | MS.gene89532:intron | 30.0% |
! | TTCTTTTATTCGAGACATGA+GGG | - | chr1.1:51020067-51020086 | None:intergenic | 30.0% |
! | TTTCTTTTATTCGAGACATG+AGG | - | chr1.1:51020068-51020087 | None:intergenic | 30.0% |
! | TTTTTGTCTTGAAGTTGCAT+GGG | + | chr1.1:51019734-51019753 | MS.gene89532:intron | 30.0% |
!! | AATTGCTTGAAGGTATTAGT+TGG | + | chr1.1:51015533-51015552 | MS.gene89532:CDS | 30.0% |
!! | ACTGACTTGGATTAATTAAC+TGG | + | chr1.1:51017065-51017084 | MS.gene89532:intron | 30.0% |
!! | GCTATTACTGAATTTGTTGT+TGG | + | chr1.1:51016676-51016695 | MS.gene89532:intron | 30.0% |
!! | TCACTGTATTGATTCAACTA+GGG | + | chr1.1:51014512-51014531 | MS.gene89532:intron | 30.0% |
!! | TTATACCATGTTATTTCCCA+TGG | + | chr1.1:51016186-51016205 | MS.gene89532:intron | 30.0% |
!! | TTCACTGTATTGATTCAACT+AGG | + | chr1.1:51014511-51014530 | MS.gene89532:intron | 30.0% |
!!! | AATCCAAATTGGTTTTAGCA+GGG | - | chr1.1:51018889-51018908 | None:intergenic | 30.0% |
!!! | ACTTTTAAGTTAACAGTGCA+AGG | - | chr1.1:51017962-51017981 | None:intergenic | 30.0% |
!!! | TAATCCAAATTGGTTTTAGC+AGG | - | chr1.1:51018890-51018909 | None:intergenic | 30.0% |
!!! | TTTTTTATGAGCACGAGAAA+TGG | + | chr1.1:51019235-51019254 | MS.gene89532:intron | 30.0% |
AAACCTGATTGTAAAACTGC+AGG | - | chr1.1:51017779-51017798 | None:intergenic | 35.0% | |
AAACTCACTTTACAAGCCAT+GGG | - | chr1.1:51016205-51016224 | None:intergenic | 35.0% | |
AACAACCAAAATTGAGTAGC+TGG | - | chr1.1:51016067-51016086 | None:intergenic | 35.0% | |
AACAATAGAAAAGGGGAGAT+GGG | - | chr1.1:51016643-51016662 | None:intergenic | 35.0% | |
AACAGCAATTATTTCCCCAT+TGG | - | chr1.1:51016768-51016787 | None:intergenic | 35.0% | |
AACTGTGTTTGCAGTGAAAT+GGG | + | chr1.1:51018298-51018317 | MS.gene89532:intron | 35.0% | |
AAGCATGCTAAGCATATGTA+TGG | - | chr1.1:51014831-51014850 | None:intergenic | 35.0% | |
ACAAATTCACAGTCGACAAA+AGG | - | chr1.1:51015210-51015229 | None:intergenic | 35.0% | |
ACACTATATCAATCACATGC+TGG | - | chr1.1:51018098-51018117 | None:intergenic | 35.0% | |
ACATTTGTGACAAAAACAGC+CGG | - | chr1.1:51017233-51017252 | None:intergenic | 35.0% | |
ACCTGAGCAGTTAAAAGATA+TGG | - | chr1.1:51017039-51017058 | None:intergenic | 35.0% | |
ACTTGGCATTAGAGATTACA+GGG | - | chr1.1:51016366-51016385 | None:intergenic | 35.0% | |
AGATTGCCAAAATCAGTTAC+AGG | - | chr1.1:51017830-51017849 | None:intergenic | 35.0% | |
ATAATGTGTTAATCGGCTAC+AGG | + | chr1.1:51016497-51016516 | MS.gene89532:intron | 35.0% | |
ATCAAGTAATGTATGAGCTC+CGG | + | chr1.1:51018467-51018486 | MS.gene89532:CDS | 35.0% | |
ATCAGATATGGAACTTGTCA+GGG | + | chr1.1:51020548-51020567 | MS.gene89532:CDS | 35.0% | |
ATCTACCACATGGTGAAAAA+TGG | - | chr1.1:51018327-51018346 | None:intergenic | 35.0% | |
ATGCTAAGCATATGTATGGT+GGG | - | chr1.1:51014827-51014846 | None:intergenic | 35.0% | |
ATTACAAACTCTTGTACACC+AGG | + | chr1.1:51018399-51018418 | MS.gene89532:CDS | 35.0% | |
ATTACTTGATGTGCTGAGAT+TGG | - | chr1.1:51018457-51018476 | None:intergenic | 35.0% | |
CAAATCTTAGATCCGATTCA+AGG | - | chr1.1:51015737-51015756 | None:intergenic | 35.0% | |
CAACAAGTAGGCACTATTTA+TGG | + | chr1.1:51020351-51020370 | MS.gene89532:intron | 35.0% | |
CAGTATTTGTGTTGAAGACA+AGG | + | chr1.1:51016974-51016993 | MS.gene89532:CDS | 35.0% | |
CATGAGTACTTCTATGAAAG+AGG | + | chr1.1:51016312-51016331 | MS.gene89532:intron | 35.0% | |
CGACTGGATTCGATTTATAA+TGG | - | chr1.1:51017897-51017916 | None:intergenic | 35.0% | |
CTTGTCTTCAACACAAATAC+TGG | - | chr1.1:51016976-51016995 | None:intergenic | 35.0% | |
GATAGGTTCATAACTTCAGA+AGG | - | chr1.1:51018066-51018085 | None:intergenic | 35.0% | |
GTCACACTATCAAGCATTTA+TGG | - | chr1.1:51014673-51014692 | None:intergenic | 35.0% | |
TAACAATAGAAAAGGGGAGA+TGG | - | chr1.1:51016644-51016663 | None:intergenic | 35.0% | |
TACAGTCTTGGAGGTAAAAA+TGG | + | chr1.1:51019968-51019987 | MS.gene89532:intron | 35.0% | |
TACATACCCGTCCTAATAAA+AGG | + | chr1.1:51015886-51015905 | MS.gene89532:intron | 35.0% | |
TATCAGATATGGAACTTGTC+AGG | + | chr1.1:51020547-51020566 | MS.gene89532:CDS | 35.0% | |
TCACCAAAGGTTATAACACA+TGG | - | chr1.1:51016842-51016861 | None:intergenic | 35.0% | |
TCATGCGGCAAATTAATAGA+AGG | - | chr1.1:51017857-51017876 | None:intergenic | 35.0% | |
TCTACCACATGGTGAAAAAT+GGG | - | chr1.1:51018326-51018345 | None:intergenic | 35.0% | |
TGAAACTGGAAATTGCTTGA+AGG | + | chr1.1:51015523-51015542 | MS.gene89532:CDS | 35.0% | |
TGAGGACTAAAAATGAAAGC+AGG | - | chr1.1:51018804-51018823 | None:intergenic | 35.0% | |
TGCCATTCACATTACAAGTA+CGG | - | chr1.1:51020759-51020778 | None:intergenic | 35.0% | |
TGGTTATTAATTCTCAGGGT+TGG | + | chr1.1:51014415-51014434 | MS.gene89532:intron | 35.0% | |
TGTACAAGAGTTTGTAATCC+TGG | - | chr1.1:51018397-51018416 | None:intergenic | 35.0% | |
! | AAATGTTTGGAGTGACTTTG+TGG | + | chr1.1:51018239-51018258 | MS.gene89532:intron | 35.0% |
! | ACTAACCAGCTACTCAATTT+TGG | + | chr1.1:51016059-51016078 | MS.gene89532:intron | 35.0% |
! | ATACCTGCAGTTTTACAATC+AGG | + | chr1.1:51017773-51017792 | MS.gene89532:CDS | 35.0% |
! | GAAATAATTGCTGTTGCATC+AGG | + | chr1.1:51016773-51016792 | MS.gene89532:CDS | 35.0% |
! | GCGTGCAGGAAAATTTTATA+GGG | + | chr1.1:51019193-51019212 | MS.gene89532:intron | 35.0% |
! | TCATAGTGTAGCTCTACTAT+AGG | - | chr1.1:51015864-51015883 | None:intergenic | 35.0% |
! | TCATTTAGAATATCCTCCAC+CGG | + | chr1.1:51017211-51017230 | MS.gene89532:CDS | 35.0% |
! | TGCGTGCAGGAAAATTTTAT+AGG | + | chr1.1:51019192-51019211 | MS.gene89532:intron | 35.0% |
! | TTGCATTCAAAAGCATACCT+TGG | - | chr1.1:51020649-51020668 | None:intergenic | 35.0% |
! | TTTCGTACATGCTTGTTTCT+AGG | - | chr1.1:51015044-51015063 | None:intergenic | 35.0% |
! | TTTTAGCAGGGACTAAAACT+GGG | - | chr1.1:51018877-51018896 | None:intergenic | 35.0% |
!! | ACCATATCTTTTAACTGCTC+AGG | + | chr1.1:51017035-51017054 | MS.gene89532:CDS | 35.0% |
!! | CGTTTACCTGTAACTGATTT+TGG | + | chr1.1:51017821-51017840 | MS.gene89532:CDS | 35.0% |
!! | CTATTAATTTGCCGCATGAT+GGG | + | chr1.1:51017858-51017877 | MS.gene89532:CDS | 35.0% |
!! | CTGAAAAGCATTGTCATTGA+TGG | + | chr1.1:51019924-51019943 | MS.gene89532:CDS | 35.0% |
!! | TCTATTAATTTGCCGCATGA+TGG | + | chr1.1:51017857-51017876 | MS.gene89532:CDS | 35.0% |
!!! | ATGGAAGTTGGTGATTTTGT+AGG | + | chr1.1:51019254-51019273 | MS.gene89532:intron | 35.0% |
!!! | TGGAAGTTGGTGATTTTGTA+GGG | + | chr1.1:51019255-51019274 | MS.gene89532:intron | 35.0% |
AAGGTAGAACATGTCACCAA+AGG | - | chr1.1:51016855-51016874 | None:intergenic | 40.0% | |
AATTCAACTCTTGACACTGG+TGG | - | chr1.1:51017290-51017309 | None:intergenic | 40.0% | |
AATTGCAACTTACTGTGTGG+AGG | - | chr1.1:51015397-51015416 | None:intergenic | 40.0% | |
ACAAACACTAAGACTGTGCT+AGG | - | chr1.1:51016457-51016476 | None:intergenic | 40.0% | |
ACAAGCCATGGGAAATAACA+TGG | - | chr1.1:51016194-51016213 | None:intergenic | 40.0% | |
ACTAACCATCCTTGCAGAAA+AGG | - | chr1.1:51017623-51017642 | None:intergenic | 40.0% | |
ACTTGTAATGTGAATGGCAC+TGG | + | chr1.1:51020760-51020779 | MS.gene89532:CDS | 40.0% | |
AGCAGAATATGCTCAGATGT+AGG | - | chr1.1:51019876-51019895 | None:intergenic | 40.0% | |
AGGCAATAAAGGGCAATACT+TGG | - | chr1.1:51015322-51015341 | None:intergenic | 40.0% | |
AGTCCCTGCTAAAACCAATT+TGG | + | chr1.1:51018883-51018902 | MS.gene89532:intron | 40.0% | |
AGTTGTGTAAGTACCATGAG+AGG | - | chr1.1:51015145-51015164 | None:intergenic | 40.0% | |
ATCAATAACCTCACAATGGG+TGG | + | chr1.1:51017458-51017477 | MS.gene89532:CDS | 40.0% | |
ATCAGGACATATGCCTAGAA+CGG | - | chr1.1:51016421-51016440 | None:intergenic | 40.0% | |
ATGGCCATTATATTCTGCTC+CGG | - | chr1.1:51017408-51017427 | None:intergenic | 40.0% | |
CAAACCGGAGCAGAATATAA+TGG | + | chr1.1:51017401-51017420 | MS.gene89532:CDS | 40.0% | |
CAAACTCACTTTACAAGCCA+TGG | - | chr1.1:51016206-51016225 | None:intergenic | 40.0% | |
CAAAGGTTATAACACATGGC+AGG | - | chr1.1:51016838-51016857 | None:intergenic | 40.0% | |
CAACTGTGTTTGCAGTGAAA+TGG | + | chr1.1:51018297-51018316 | MS.gene89532:intron | 40.0% | |
CAATTATTTCCCCATTGGCA+TGG | - | chr1.1:51016763-51016782 | None:intergenic | 40.0% | |
CACTTGGCATTAGAGATTAC+AGG | - | chr1.1:51016367-51016386 | None:intergenic | 40.0% | |
CAGAATATGAGAACCGTTCT+AGG | + | chr1.1:51016405-51016424 | MS.gene89532:intron | 40.0% | |
CATCCATTAGAATCTGGTGA+CGG | - | chr1.1:51017593-51017612 | None:intergenic | 40.0% | |
CATCCCATAAACGAACTTCT+TGG | - | chr1.1:51016572-51016591 | None:intergenic | 40.0% | |
CATGCTAAGCATATGTATGG+TGG | - | chr1.1:51014828-51014847 | None:intergenic | 40.0% | |
CATTACAAGTACGGTCAAAC+TGG | - | chr1.1:51020750-51020769 | None:intergenic | 40.0% | |
CCATATTTGGATTGATGTGC+AGG | + | chr1.1:51017136-51017155 | MS.gene89532:intron | 40.0% | |
CCTGCACATCAATCCAAATA+TGG | - | chr1.1:51017139-51017158 | None:intergenic | 40.0% | |
CGACATGTGGTATAGTTAGA+CGG | - | chr1.1:51018030-51018049 | None:intergenic | 40.0% | |
CTCGTGCTCATAAAAAAAGG+TGG | - | chr1.1:51019232-51019251 | None:intergenic | 40.0% | |
CTGCCATGTGTTATAACCTT+TGG | + | chr1.1:51016836-51016855 | MS.gene89532:intron | 40.0% | |
CTGTAATCTCTAATGCCAAG+TGG | + | chr1.1:51016365-51016384 | MS.gene89532:intron | 40.0% | |
GACCGTACTTGTAATGTGAA+TGG | + | chr1.1:51020754-51020773 | MS.gene89532:CDS | 40.0% | |
GGAAAATTCATACCTGGTGT+TGG | - | chr1.1:51014154-51014173 | None:intergenic | 40.0% | |
GGACCAAGAAGTTCGTTTAT+GGG | + | chr1.1:51016566-51016585 | MS.gene89532:CDS | 40.0% | |
GGCATCAATAACCTCACAAT+GGG | + | chr1.1:51017455-51017474 | MS.gene89532:CDS | 40.0% | |
GTGAAAGAACCAATCTGTTG+AGG | - | chr1.1:51017680-51017699 | None:intergenic | 40.0% | |
GTGGCACTACAAAAATGCAA+GGG | + | chr1.1:51016939-51016958 | MS.gene89532:CDS | 40.0% | |
GTTGTAGGAAGGAAAGCTTA+GGG | + | chr1.1:51020720-51020739 | MS.gene89532:intron | 40.0% | |
TAACCCATGTCTCCTTGAAT+CGG | + | chr1.1:51015722-51015741 | MS.gene89532:intron | 40.0% | |
TATAACACATGGCAGGTTCT+CGG | - | chr1.1:51016831-51016850 | None:intergenic | 40.0% | |
TCAATGCTTCCTCAACAGAT+TGG | + | chr1.1:51017668-51017687 | MS.gene89532:CDS | 40.0% | |
TCCAATTGCAACTTACTGTG+TGG | - | chr1.1:51015400-51015419 | None:intergenic | 40.0% | |
TCCACACAGTAAGTTGCAAT+TGG | + | chr1.1:51015396-51015415 | MS.gene89532:intron | 40.0% | |
TGCAATTCAACTCTTGACAC+TGG | - | chr1.1:51017293-51017312 | None:intergenic | 40.0% | |
TGGACCAAGAAGTTCGTTTA+TGG | + | chr1.1:51016565-51016584 | MS.gene89532:CDS | 40.0% | |
TGGCATCAATAACCTCACAA+TGG | + | chr1.1:51017454-51017473 | MS.gene89532:CDS | 40.0% | |
TGTGGCACTACAAAAATGCA+AGG | + | chr1.1:51016938-51016957 | MS.gene89532:CDS | 40.0% | |
TTAGACGGCATCTTTGTAGT+GGG | - | chr1.1:51018015-51018034 | None:intergenic | 40.0% | |
TTCACAATAAACAAGGTGGG+TGG | - | chr1.1:51014907-51014926 | None:intergenic | 40.0% | |
TTCAGATTGCTCAATGACAG+AGG | + | chr1.1:51017175-51017194 | MS.gene89532:CDS | 40.0% | |
TTCTAGGCATATGTCCTGAT+GGG | + | chr1.1:51016421-51016440 | MS.gene89532:intron | 40.0% | |
TTGTCACAAATGTTCATCCC+AGG | + | chr1.1:51017240-51017259 | MS.gene89532:CDS | 40.0% | |
TTTCTGCAAGGATGGTTAGT+CGG | + | chr1.1:51017623-51017642 | MS.gene89532:CDS | 40.0% | |
! | AAATTTGATTTCCAGGGTCG+AGG | + | chr1.1:51015272-51015291 | MS.gene89532:intron | 40.0% |
! | AACGACAGATACTTGCTAGT+GGG | + | chr1.1:51016538-51016557 | MS.gene89532:CDS | 40.0% |
! | AGCATGCAGGTTGAACAATA+CGG | + | chr1.1:51017341-51017360 | MS.gene89532:CDS | 40.0% |
! | ATACCTGGTGTTGGAATTCT+GGG | - | chr1.1:51014145-51014164 | None:intergenic | 40.0% |
! | ATGCTTTCATCCTTTTCCTG+GGG | + | chr1.1:51020605-51020624 | MS.gene89532:CDS | 40.0% |
! | ATTCAAGGAGACATGGGTTA+TGG | - | chr1.1:51015722-51015741 | None:intergenic | 40.0% |
! | CATGATCAGCGTTTTCATGT+TGG | - | chr1.1:51017520-51017539 | None:intergenic | 40.0% |
! | CATGCTTTCATCCTTTTCCT+GGG | + | chr1.1:51020604-51020623 | MS.gene89532:CDS | 40.0% |
! | CTCTAGGAAAGTCAATTACG+AGG | + | chr1.1:51015237-51015256 | MS.gene89532:intron | 40.0% |
! | GGAATTTTCCATGGAATCAG+CGG | + | chr1.1:51014083-51014102 | MS.gene89532:CDS | 40.0% |
! | GTCACCAGATTCTAATGGAT+GGG | + | chr1.1:51017592-51017611 | MS.gene89532:CDS | 40.0% |
! | TGTTTAGTTGTTGTGTTGGC+TGG | + | chr1.1:51020382-51020401 | MS.gene89532:intron | 40.0% |
! | TTCAAGGAGACATGGGTTAT+GGG | - | chr1.1:51015721-51015740 | None:intergenic | 40.0% |
! | TTGAACTTAGCTTGAGGGTT+AGG | + | chr1.1:51014548-51014567 | MS.gene89532:intron | 40.0% |
!! | AATCTGTTGAGGAAGCATTG+AGG | - | chr1.1:51017669-51017688 | None:intergenic | 40.0% |
!! | AGCAGGTAATTTTCAAGGGA+CGG | - | chr1.1:51018787-51018806 | None:intergenic | 40.0% |
!! | ATCTGTTGAGGAAGCATTGA+GGG | - | chr1.1:51017668-51017687 | None:intergenic | 40.0% |
!! | GTTTTAGCAGGGACTAAAAC+TGG | - | chr1.1:51018878-51018897 | None:intergenic | 40.0% |
!! | TTGGTGGTGAACAGATTAGA+TGG | - | chr1.1:51017707-51017726 | None:intergenic | 40.0% |
!!! | GTTTTCATGTTGGCTTGCTT+CGG | - | chr1.1:51017510-51017529 | None:intergenic | 40.0% |
AAAAGATATGGTGCCCCATG+CGG | - | chr1.1:51017027-51017046 | None:intergenic | 45.0% | |
AACTGACCTGGATTGAAGTC+AGG | - | chr1.1:51018670-51018689 | None:intergenic | 45.0% | |
ACAGTGGTAGATGCAAAGTG+TGG | + | chr1.1:51015116-51015135 | MS.gene89532:CDS | 45.0% | |
ACTATGGGCACAAAACCACT+TGG | - | chr1.1:51016383-51016402 | None:intergenic | 45.0% | |
ACTCCAATCATGTTCTCCTC+AGG | - | chr1.1:51020799-51020818 | None:intergenic | 45.0% | |
AGATCCGATTCAAGGAGACA+TGG | - | chr1.1:51015729-51015748 | None:intergenic | 45.0% | |
AGCTCCCATCCATTAGAATC+TGG | - | chr1.1:51017599-51017618 | None:intergenic | 45.0% | |
AGGTATTAGTTGGCCACAGA+AGG | + | chr1.1:51015543-51015562 | MS.gene89532:CDS | 45.0% | |
ATAACCTCACAATGGGTGGT+AGG | + | chr1.1:51017462-51017481 | MS.gene89532:CDS | 45.0% | |
ATGACAGAGGCAACATCTCA+TGG | + | chr1.1:51017188-51017207 | MS.gene89532:CDS | 45.0% | |
CAGCATGCTAGTAACGATGT+TGG | + | chr1.1:51017311-51017330 | MS.gene89532:CDS | 45.0% | |
CATGCTGGAGCAGATATGAT+AGG | - | chr1.1:51018083-51018102 | None:intergenic | 45.0% | |
CCAGAAGACGAGCCAATTTA+TGG | + | chr1.1:51016001-51016020 | MS.gene89532:intron | 45.0% | |
CGTCACCAGATTCTAATGGA+TGG | + | chr1.1:51017591-51017610 | MS.gene89532:CDS | 45.0% | |
CTCCAATCATGTTCTCCTCA+GGG | - | chr1.1:51020798-51020817 | None:intergenic | 45.0% | |
CTGCAGCATTTAGTCCAGAT+GGG | + | chr1.1:51015361-51015380 | MS.gene89532:CDS | 45.0% | |
CTTCCTCCAGGGAATATATC+CGG | - | chr1.1:51018489-51018508 | None:intergenic | 45.0% | |
GATCCGATTCAAGGAGACAT+GGG | - | chr1.1:51015728-51015747 | None:intergenic | 45.0% | |
GCAAGTATCTGTCGTTGCAA+TGG | - | chr1.1:51016534-51016553 | None:intergenic | 45.0% | |
GCGGCTAAAAATCTACCACA+TGG | - | chr1.1:51018337-51018356 | None:intergenic | 45.0% | |
GGAAAGCGAGAGATGCAATA+GGG | - | chr1.1:51016742-51016761 | None:intergenic | 45.0% | |
GGTTGTAGGAAGGAAAGCTT+AGG | + | chr1.1:51020719-51020738 | MS.gene89532:intron | 45.0% | |
GTATCTGTCGTTGCAATGGA+TGG | - | chr1.1:51016530-51016549 | None:intergenic | 45.0% | |
GTGTTAATCGGCTACAGGTT+AGG | + | chr1.1:51016502-51016521 | MS.gene89532:intron | 45.0% | |
GTTAGACGGCATCTTTGTAG+TGG | - | chr1.1:51018016-51018035 | None:intergenic | 45.0% | |
GTTCCGTCACCAGATTCTAA+TGG | + | chr1.1:51017587-51017606 | MS.gene89532:CDS | 45.0% | |
TAACCTCACAATGGGTGGTA+GGG | + | chr1.1:51017463-51017482 | MS.gene89532:CDS | 45.0% | |
TAATTCTGTAGCAGCTGCAG+TGG | - | chr1.1:51017939-51017958 | None:intergenic | 45.0% | |
TACTGTGTCAGTTGTACGTG+TGG | + | chr1.1:51016920-51016939 | MS.gene89532:intron | 45.0% | |
TAGACGGCATCTTTGTAGTG+GGG | - | chr1.1:51018014-51018033 | None:intergenic | 45.0% | |
TCAGTTACAGGTAAACGGGA+TGG | - | chr1.1:51017818-51017837 | None:intergenic | 45.0% | |
TCATTGCCTGACTTCAATCC+AGG | + | chr1.1:51018661-51018680 | MS.gene89532:CDS | 45.0% | |
TGAGCACGAGAAATGGAAGT+TGG | + | chr1.1:51019242-51019261 | MS.gene89532:intron | 45.0% | |
TGGAAAGCGAGAGATGCAAT+AGG | - | chr1.1:51016743-51016762 | None:intergenic | 45.0% | |
TGGCTATCAAACCCATCATG+CGG | - | chr1.1:51017872-51017891 | None:intergenic | 45.0% | |
TTAGTCGGTCAAAGCCAAGT+TGG | + | chr1.1:51017638-51017657 | MS.gene89532:CDS | 45.0% | |
TTCCCTGAGGAGAACATGAT+TGG | + | chr1.1:51020793-51020812 | MS.gene89532:CDS | 45.0% | |
TTTGTGACAAAAACAGCCGG+TGG | - | chr1.1:51017230-51017249 | None:intergenic | 45.0% | |
! | AATGTGAATGGCACTGGATC+TGG | + | chr1.1:51020766-51020785 | MS.gene89532:CDS | 45.0% |
! | AGGCAATGAGCAGCTCTAAT+TGG | - | chr1.1:51018650-51018669 | None:intergenic | 45.0% |
! | ATACCCACTAGCTCTCAAAC+CGG | + | chr1.1:51017386-51017405 | MS.gene89532:CDS | 45.0% |
! | CAACGACAGATACTTGCTAG+TGG | + | chr1.1:51016537-51016556 | MS.gene89532:CDS | 45.0% |
! | CATACCTGGTGTTGGAATTC+TGG | - | chr1.1:51014146-51014165 | None:intergenic | 45.0% |
! | GAGGCAAGAATTTTCCCATC+TGG | - | chr1.1:51015378-51015397 | None:intergenic | 45.0% |
! | GATACTTGCTAGTGGGAGTT+TGG | + | chr1.1:51016545-51016564 | MS.gene89532:CDS | 45.0% |
! | GATTGATAACCCTTTGCTCG+TGG | + | chr1.1:51020695-51020714 | MS.gene89532:intron | 45.0% |
! | GCATGCTTTCATCCTTTTCC+TGG | + | chr1.1:51020603-51020622 | MS.gene89532:CDS | 45.0% |
! | GTTCTAGGCATATGTCCTGA+TGG | + | chr1.1:51016420-51016439 | MS.gene89532:intron | 45.0% |
! | TAGGATTTGAAGCACCCATC+AGG | - | chr1.1:51016438-51016457 | None:intergenic | 45.0% |
! | TAGGGAATAAAAGTGCGTGC+AGG | + | chr1.1:51019179-51019198 | MS.gene89532:intron | 45.0% |
! | TGCTTTCATCCTTTTCCTGG+GGG | + | chr1.1:51020606-51020625 | MS.gene89532:CDS | 45.0% |
! | TGGACTAGAGTACATCTGAG+AGG | - | chr1.1:51018560-51018579 | None:intergenic | 45.0% |
! | TTGAGAGCTAGTGGGTATCT+CGG | - | chr1.1:51017384-51017403 | None:intergenic | 45.0% |
! | TTGGAATTCTGGGAGGATGA+GGG | - | chr1.1:51014135-51014154 | None:intergenic | 45.0% |
!! | AACACCTCCTGAAAGTGTTG+TGG | + | chr1.1:51015694-51015713 | MS.gene89532:intron | 45.0% |
!! | ACACCTCCTGAAAGTGTTGT+GGG | + | chr1.1:51015695-51015714 | MS.gene89532:intron | 45.0% |
!! | AGCATGTACGAAAGTGTCAC+TGG | + | chr1.1:51015051-51015070 | MS.gene89532:CDS | 45.0% |
!! | ATGAAGTTCCGCTGATTCCA+TGG | - | chr1.1:51014094-51014113 | None:intergenic | 45.0% |
!! | CATGTACGAAAGTGTCACTG+GGG | + | chr1.1:51015053-51015072 | MS.gene89532:CDS | 45.0% |
!! | CCATAAATTGGCTCGTCTTC+TGG | - | chr1.1:51016004-51016023 | None:intergenic | 45.0% |
!! | CTGTTCTCGTTCTAGAACAG+TGG | + | chr1.1:51015100-51015119 | MS.gene89532:CDS | 45.0% |
!! | CTTGATAGTGTGACAGTCAC+AGG | + | chr1.1:51014679-51014698 | MS.gene89532:intron | 45.0% |
!! | GCATGTACGAAAGTGTCACT+GGG | + | chr1.1:51015052-51015071 | MS.gene89532:CDS | 45.0% |
!! | TGTTGGTTTGAGTAGCATGC+AGG | + | chr1.1:51017328-51017347 | MS.gene89532:CDS | 45.0% |
!! | AAAATAATTCAAAAATTTAA+AGG | - | chr1.1:51018925-51018944 | None:intergenic | 5.0% |
!! | ATAAAAAAATAAAAAAACAA+AGG | - | chr1.1:51016874-51016893 | None:intergenic | 5.0% |
AAAGATATGGTGCCCCATGC+GGG | - | chr1.1:51017026-51017045 | None:intergenic | 50.0% | |
AAGCCAAAGCTTACCACCCA+AGG | - | chr1.1:51015572-51015591 | None:intergenic | 50.0% | |
AGAGCTATGACGTCGACCAT+AGG | - | chr1.1:51019901-51019920 | None:intergenic | 50.0% | |
AGGGCTTGTCTATGGAACCA+AGG | + | chr1.1:51020629-51020648 | MS.gene89532:CDS | 50.0% | |
AGGGTGCATACATGCAACAC+AGG | - | chr1.1:51018359-51018378 | None:intergenic | 50.0% | |
ATGCCATTGGGCATTCCTGA+AGG | - | chr1.1:51017749-51017768 | None:intergenic | 50.0% | |
CAAAGTGTGGTCTCCTCTCA+TGG | + | chr1.1:51015129-51015148 | MS.gene89532:CDS | 50.0% | |
CACAGCTAGCTCAACATTGG+TGG | - | chr1.1:51017723-51017742 | None:intergenic | 50.0% | |
CTACAACCACCACGAGCAAA+GGG | - | chr1.1:51020707-51020726 | None:intergenic | 50.0% | |
CTCAGGTGAGTGAACTGACT+TGG | + | chr1.1:51017052-51017071 | MS.gene89532:intron | 50.0% | |
CTCTCGCTTTCCATGCCAAT+GGG | + | chr1.1:51016750-51016769 | MS.gene89532:CDS | 50.0% | |
CTGCAGCAATAGTAGACCGT+GGG | - | chr1.1:51015347-51015366 | None:intergenic | 50.0% | |
GACATGTTGATCTGCGTCCT+GGG | - | chr1.1:51017260-51017279 | None:intergenic | 50.0% | |
GAGCATATTCTGCTCGCCTA+TGG | + | chr1.1:51019882-51019901 | MS.gene89532:CDS | 50.0% | |
GCAGGTATGCTGATGCCATT+GGG | - | chr1.1:51017761-51017780 | None:intergenic | 50.0% | |
GCATTGAGGGAACACCAACT+TGG | - | chr1.1:51017655-51017674 | None:intergenic | 50.0% | |
GCTGAGATTGGATGTCGAGT+TGG | - | chr1.1:51018445-51018464 | None:intergenic | 50.0% | |
GCTGCAGCATTTAGTCCAGA+TGG | + | chr1.1:51015360-51015379 | MS.gene89532:CDS | 50.0% | |
GGGCGCAGGAAAATACTGTA+AGG | - | chr1.1:51018857-51018876 | None:intergenic | 50.0% | |
GTCGGAACTTGCCAAATCAG+TGG | + | chr1.1:51017913-51017932 | MS.gene89532:CDS | 50.0% | |
GTGCATACATGCAACACAGG+CGG | - | chr1.1:51018356-51018375 | None:intergenic | 50.0% | |
TATGGGCCCACAACACTTTC+AGG | - | chr1.1:51015704-51015723 | None:intergenic | 50.0% | |
TCTCGCTTTCCATGCCAATG+GGG | + | chr1.1:51016751-51016770 | MS.gene89532:CDS | 50.0% | |
TCTCTCGCTTTCCATGCCAA+TGG | + | chr1.1:51016749-51016768 | MS.gene89532:CDS | 50.0% | |
TGACATGTTGATCTGCGTCC+TGG | - | chr1.1:51017261-51017280 | None:intergenic | 50.0% | |
TGAGCTCCGGATATATTCCC+TGG | + | chr1.1:51018480-51018499 | MS.gene89532:CDS | 50.0% | |
TGATAACCCTTTGCTCGTGG+TGG | + | chr1.1:51020698-51020717 | MS.gene89532:intron | 50.0% | |
TGCAGAGGATGAGGTCAATG+TGG | + | chr1.1:51020581-51020600 | MS.gene89532:CDS | 50.0% | |
TGCAGCAATAGTAGACCGTG+GGG | - | chr1.1:51015346-51015365 | None:intergenic | 50.0% | |
TGCAGGTATGCTGATGCCAT+TGG | - | chr1.1:51017762-51017781 | None:intergenic | 50.0% | |
TGCTGTTGCATCAGGTCACA+AGG | + | chr1.1:51016781-51016800 | MS.gene89532:CDS | 50.0% | |
TGGATCTGGTTACTTCCCTG+AGG | + | chr1.1:51020780-51020799 | MS.gene89532:CDS | 50.0% | |
TGGCACAGCTAGCTCAACAT+TGG | - | chr1.1:51017726-51017745 | None:intergenic | 50.0% | |
! | AGCTGCCTTTTCTGCAAGGA+TGG | + | chr1.1:51017615-51017634 | MS.gene89532:CDS | 50.0% |
! | CTGTGCATTTTCACCCGCAT+GGG | + | chr1.1:51017010-51017029 | MS.gene89532:CDS | 50.0% |
! | GAGGGTTGATCATGACACAG+AGG | - | chr1.1:51014117-51014136 | None:intergenic | 50.0% |
! | GCTTTCTAGTGCAGAGGATG+AGG | + | chr1.1:51020572-51020591 | MS.gene89532:CDS | 50.0% |
! | GTTGGAATTCTGGGAGGATG+AGG | - | chr1.1:51014136-51014155 | None:intergenic | 50.0% |
! | TGTGCATTTTCACCCGCATG+GGG | + | chr1.1:51017011-51017030 | MS.gene89532:CDS | 50.0% |
! | TGTGCTTTTGGCATGTGCAG+TGG | + | chr1.1:51015473-51015492 | MS.gene89532:intron | 50.0% |
! | TTCATCCTTTTCCTGGGGGA+GGG | + | chr1.1:51020610-51020629 | MS.gene89532:CDS | 50.0% |
! | TTTCATCCTTTTCCTGGGGG+AGG | + | chr1.1:51020609-51020628 | MS.gene89532:CDS | 50.0% |
!! | ACTTCAGAAGGTACCTGCAG+AGG | - | chr1.1:51018054-51018073 | None:intergenic | 50.0% |
!! | CTGATTTGGCAAGTTCCGAC+TGG | - | chr1.1:51017913-51017932 | None:intergenic | 50.0% |
!! | GGATGTCGAGTTGGTGATGT+TGG | - | chr1.1:51018436-51018455 | None:intergenic | 50.0% |
!! | GGTGCCCATTTTTCACCATG+TGG | + | chr1.1:51018319-51018338 | MS.gene89532:CDS | 50.0% |
!! | GTTGGTGATGTTGGAAGTCC+AGG | - | chr1.1:51018427-51018446 | None:intergenic | 50.0% |
!! | TCTGGTGACGGAACAATCTG+AGG | - | chr1.1:51017581-51017600 | None:intergenic | 50.0% |
ACCGTGGGGCAGGCAATAAA+GGG | - | chr1.1:51015332-51015351 | None:intergenic | 55.0% | |
ACGCCTTGGGTGGTAAGCTT+TGG | + | chr1.1:51015566-51015585 | MS.gene89532:intron | 55.0% | |
ACTCTTGTACACCAGGAGCC+TGG | + | chr1.1:51018406-51018425 | MS.gene89532:CDS | 55.0% | |
AGGAGGGAGGGACAGAGATA+TGG | - | chr1.1:51019572-51019591 | None:intergenic | 55.0% | |
AGTCGTACGTTGCTTCCTCC+AGG | - | chr1.1:51018501-51018520 | None:intergenic | 55.0% | |
ATGTTGGAAGTCCAGGCTCC+TGG | - | chr1.1:51018420-51018439 | None:intergenic | 55.0% | |
CCACCTTCAGGAATGCCCAA+TGG | + | chr1.1:51017743-51017762 | MS.gene89532:CDS | 55.0% | |
CCATTGGGCATTCCTGAAGG+TGG | - | chr1.1:51017746-51017765 | None:intergenic | 55.0% | |
CCTACAACCACCACGAGCAA+AGG | - | chr1.1:51020708-51020727 | None:intergenic | 55.0% | |
CCTCCCAGAATTCCAACACC+AGG | + | chr1.1:51014139-51014158 | MS.gene89532:CDS | 55.0% | |
CCTTTGCTCGTGGTGGTTGT+AGG | + | chr1.1:51020705-51020724 | MS.gene89532:intron | 55.0% | |
CGCGTTGAACTCTCTGAGCT+TGG | + | chr1.1:51017548-51017567 | MS.gene89532:CDS | 55.0% | |
GCTCCGGATATATTCCCTGG+AGG | + | chr1.1:51018483-51018502 | MS.gene89532:CDS | 55.0% | |
GCTGCAGCAATAGTAGACCG+TGG | - | chr1.1:51015348-51015367 | None:intergenic | 55.0% | |
GGAGGGAGGGACAGAGATAT+GGG | - | chr1.1:51019571-51019590 | None:intergenic | 55.0% | |
GGGATGCTAGCTCATCAGAG+TGG | + | chr1.1:51016586-51016605 | MS.gene89532:CDS | 55.0% | |
GTCGTACGTTGCTTCCTCCA+GGG | - | chr1.1:51018500-51018519 | None:intergenic | 55.0% | |
GTGACAAAAACAGCCGGTGG+AGG | - | chr1.1:51017227-51017246 | None:intergenic | 55.0% | |
TACCACATGTCGTCCTCTGC+AGG | + | chr1.1:51018038-51018057 | MS.gene89532:CDS | 55.0% | |
TACCTGCAGAGGACGACATG+TGG | - | chr1.1:51018043-51018062 | None:intergenic | 55.0% | |
TGCTCGTGGTGGTTGTAGGA+AGG | + | chr1.1:51020709-51020728 | MS.gene89532:intron | 55.0% | |
! | AGCTGCAGTGGCCACTGATT+TGG | - | chr1.1:51017927-51017946 | None:intergenic | 55.0% |
! | CAGGGTGCTTTCTAGTGCAG+AGG | + | chr1.1:51020566-51020585 | MS.gene89532:CDS | 55.0% |
! | CATCTTTGTAGTGGGGCGCA+GGG | - | chr1.1:51018007-51018026 | None:intergenic | 55.0% |
! | CCTGGTGTTGGAATTCTGGG+AGG | - | chr1.1:51014142-51014161 | None:intergenic | 55.0% |
! | GCTCCGGTTTGAGAGCTAGT+GGG | - | chr1.1:51017392-51017411 | None:intergenic | 55.0% |
! | GCTGTGCATTTTCACCCGCA+TGG | + | chr1.1:51017009-51017028 | MS.gene89532:CDS | 55.0% |
! | TGAAGACAAGGCGCTCGCTA+CGG | + | chr1.1:51016986-51017005 | MS.gene89532:CDS | 55.0% |
! | TGCTCCGGTTTGAGAGCTAG+TGG | - | chr1.1:51017393-51017412 | None:intergenic | 55.0% |
! | TGGGAGCTGCCTTTTCTGCA+AGG | + | chr1.1:51017611-51017630 | MS.gene89532:CDS | 55.0% |
!! | TCATGTTGGCTTGCTTCGGC+TGG | - | chr1.1:51017506-51017525 | None:intergenic | 55.0% |
ACAAGCCCTCCCCCAGGAAA+AGG | - | chr1.1:51020618-51020637 | None:intergenic | 60.0% | |
CAATGACTCAGCCTCGACCC+TGG | - | chr1.1:51015286-51015305 | None:intergenic | 60.0% | |
CAGGGACTAAAACTGGGCGC+AGG | - | chr1.1:51018871-51018890 | None:intergenic | 60.0% | |
CCTCACAATGGGTGGTAGGG+AGG | + | chr1.1:51017466-51017485 | MS.gene89532:CDS | 60.0% | |
CCTCCCTACCACCCATTGTG+AGG | - | chr1.1:51017469-51017488 | None:intergenic | 60.0% | |
GACCGTGGGGCAGGCAATAA+AGG | - | chr1.1:51015333-51015352 | None:intergenic | 60.0% | |
GAGCTAGCTGTGCCACCTTC+AGG | + | chr1.1:51017731-51017750 | MS.gene89532:CDS | 60.0% | |
GCAATAGTAGACCGTGGGGC+AGG | - | chr1.1:51015342-51015361 | None:intergenic | 60.0% | |
GCCCTTTATTGCCTGCCCCA+CGG | + | chr1.1:51015328-51015347 | MS.gene89532:CDS | 60.0% | |
GGGCCCACAACACTTTCAGG+AGG | - | chr1.1:51015701-51015720 | None:intergenic | 60.0% | |
TGGCCACAGAAGGACGCCTT+GGG | + | chr1.1:51015553-51015572 | MS.gene89532:CDS | 60.0% | |
TTGGCCACAGAAGGACGCCT+TGG | + | chr1.1:51015552-51015571 | MS.gene89532:CDS | 60.0% | |
! | GAAGACAAGGCGCTCGCTAC+GGG | + | chr1.1:51016987-51017006 | MS.gene89532:CDS | 60.0% |
! | GCATCTTTGTAGTGGGGCGC+AGG | - | chr1.1:51018008-51018027 | None:intergenic | 60.0% |
CCACAGAAGGACGCCTTGGG+TGG | + | chr1.1:51015556-51015575 | MS.gene89532:CDS | 65.0% | |
CCATAGACAAGCCCTCCCCC+AGG | - | chr1.1:51020624-51020643 | None:intergenic | 65.0% | |
CCTGGGGGAGGGCTTGTCTA+TGG | + | chr1.1:51020621-51020640 | MS.gene89532:CDS | 65.0% | |
! | CCACCCAAGGCGTCCTTCTG+TGG | - | chr1.1:51015559-51015578 | None:intergenic | 65.0% |
! | GCGCGCGTGCGCAGGAGGGA+GGG | - | chr1.1:51019584-51019603 | None:intergenic | 80.0% |
! | GTGCGCGCGCGTGCGCAGGA+GGG | - | chr1.1:51019588-51019607 | None:intergenic | 80.0% |
! | GTGTGTGCGCGCGCGTGCGC+AGG | - | chr1.1:51019592-51019611 | None:intergenic | 80.0% |
! | TGTGCGCGCGCGTGCGCAGG+AGG | - | chr1.1:51019589-51019608 | None:intergenic | 80.0% |
! | CGCGCGCGTGCGCAGGAGGG+AGG | - | chr1.1:51019585-51019604 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 51014081 | 51020828 | 51014081 | ID=MS.gene89532 |
chr1.1 | mRNA | 51014081 | 51020828 | 51014081 | ID=MS.gene89532.t1;Parent=MS.gene89532 |
chr1.1 | exon | 51014081 | 51014160 | 51014081 | ID=MS.gene89532.t1.exon1;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51014081 | 51014160 | 51014081 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51014998 | 51015150 | 51014998 | ID=MS.gene89532.t1.exon2;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51014998 | 51015150 | 51014998 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51015287 | 51015403 | 51015287 | ID=MS.gene89532.t1.exon3;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51015287 | 51015403 | 51015287 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51015493 | 51015577 | 51015493 | ID=MS.gene89532.t1.exon4;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51015493 | 51015577 | 51015493 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51016519 | 51016627 | 51016519 | ID=MS.gene89532.t1.exon5;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51016519 | 51016627 | 51016519 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51016735 | 51016802 | 51016735 | ID=MS.gene89532.t1.exon6;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51016735 | 51016802 | 51016735 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51016931 | 51017056 | 51016931 | ID=MS.gene89532.t1.exon7;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51016931 | 51017056 | 51016931 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51017158 | 51018059 | 51017158 | ID=MS.gene89532.t1.exon8;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51017158 | 51018059 | 51017158 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51018312 | 51018512 | 51018312 | ID=MS.gene89532.t1.exon9;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51018312 | 51018512 | 51018312 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51018622 | 51018682 | 51018622 | ID=MS.gene89532.t1.exon10;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51018622 | 51018682 | 51018622 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51019867 | 51019980 | 51019867 | ID=MS.gene89532.t1.exon11;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51019867 | 51019980 | 51019867 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51020537 | 51020650 | 51020537 | ID=MS.gene89532.t1.exon12;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51020537 | 51020650 | 51020537 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
chr1.1 | exon | 51020727 | 51020828 | 51020727 | ID=MS.gene89532.t1.exon13;Parent=MS.gene89532.t1 |
chr1.1 | CDS | 51020727 | 51020828 | 51020727 | ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1 |
Gene Sequence |
Protein sequence |