AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89532


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89532.t1 MTR_1g069355 98.654 743 10 0 1 743 1 743 0.0 1518
MS.gene89532.t1 MTR_1g069355 96.447 760 10 1 1 743 1 760 0.0 1508
MS.gene89532.t1 MTR_7g099210 66.667 783 179 11 22 743 10 771 0.0 995
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89532.t1 AT1G04140 54.293 757 297 12 29 741 32 783 0.0 771
MS.gene89532.t1 AT1G04140 54.222 758 298 12 29 742 32 784 0.0 770
MS.gene89532.t1 AT5G43930 55.850 718 273 11 28 729 34 723 0.0 746
MS.gene89532.t1 AT5G43930 55.850 718 273 11 28 729 34 723 0.0 746
MS.gene89532.t1 AT5G43930 55.850 718 273 11 28 729 34 723 0.0 746
MS.gene89532.t1 AT5G43930 53.898 744 273 13 28 729 34 749 0.0 728
MS.gene89532.t1 AT3G49660 28.571 182 116 7 105 277 78 254 3.81e-12 68.6

Find 195 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTTACCTGTAACTGATTT+TGG 0.115003 1.1:+51017821 MS.gene89532:CDS
CATACCTGGTGTTGGAATTC+TGG 0.178980 1.1:-51014143 None:intergenic
TTTCGTACATGCTTGTTTCT+AGG 0.214459 1.1:-51015041 None:intergenic
TGGACCAAGAAGTTCGTTTA+TGG 0.217778 1.1:+51016565 MS.gene89532:CDS
GACCGTGGGGCAGGCAATAA+AGG 0.268914 1.1:-51015330 None:intergenic
AAGATCATTGATTGTGAAAC+TGG 0.287636 1.1:+51015509 MS.gene89532:CDS
CTGAAAAGCATTGTCATTGA+TGG 0.314557 1.1:+51019924 MS.gene89532:CDS
GAGCTAGCTGTGCCACCTTC+AGG 0.320449 1.1:+51017731 MS.gene89532:CDS
GATACTTGCTAGTGGGAGTT+TGG 0.320714 1.1:+51016545 MS.gene89532:CDS
AGCTGCAGTGGCCACTGATT+TGG 0.321943 1.1:-51017924 None:intergenic
CGACTGGATTCGATTTATAA+TGG 0.323236 1.1:-51017894 None:intergenic
TTTGATTAGGCAAAGTAGTA+TGG 0.323889 1.1:-51017424 None:intergenic
ATGCCAATTCTCATTTGATT+AGG 0.329540 1.1:-51017437 None:intergenic
GCACTGTTAACTTAAAAGTA+TGG 0.343310 1.1:+51017963 MS.gene89532:CDS
CATCCCATAAACGAACTTCT+TGG 0.352429 1.1:-51016569 None:intergenic
GGACCAAGAAGTTCGTTTAT+GGG 0.353088 1.1:+51016566 MS.gene89532:CDS
CAACTGTGTTTGCAGTGAAA+TGG 0.357749 1.1:+51018297 MS.gene89532:intron
AGGCAATGAGCAGCTCTAAT+TGG 0.358191 1.1:-51018647 None:intergenic
TGACATGTTGATCTGCGTCC+TGG 0.364210 1.1:-51017258 None:intergenic
CTCTCGCTTTCCATGCCAAT+GGG 0.366859 1.1:+51016750 MS.gene89532:CDS
TTGCCTAATCAAATGAGAAT+TGG 0.367098 1.1:+51017434 MS.gene89532:CDS
CAAAATCAGTTACAGGTAAA+CGG 0.375548 1.1:-51017820 None:intergenic
ATACCTGGTGTTGGAATTCT+GGG 0.377546 1.1:-51014142 None:intergenic
TATCAGATATGGAACTTGTC+AGG 0.380466 1.1:+51020547 MS.gene89532:CDS
CATTACAAGTACGGTCAAAC+TGG 0.380771 1.1:-51020747 None:intergenic
GAATCTTCTGAATCAAAATC+TGG 0.390715 1.1:+51015077 MS.gene89532:CDS
GTTGGAATTCTGGGAGGATG+AGG 0.392412 1.1:-51014133 None:intergenic
TTCCCTGAGGAGAACATGAT+TGG 0.394808 1.1:+51020793 MS.gene89532:CDS
GGATTCGATTTATAATGGTT+TGG 0.398188 1.1:-51017889 None:intergenic
GAAATAATTGCTGTTGCATC+AGG 0.399592 1.1:+51016773 MS.gene89532:CDS
GTTCCGTCACCAGATTCTAA+TGG 0.400356 1.1:+51017587 MS.gene89532:CDS
ACCTGAGCAGTTAAAAGATA+TGG 0.402129 1.1:-51017036 None:intergenic
TCATGTTGGCTTGCTTCGGC+TGG 0.407111 1.1:-51017503 None:intergenic
AGATTGCCAAAATCAGTTAC+AGG 0.408627 1.1:-51017827 None:intergenic
CCTGGATCAGCTTCCATATG+AGG 0.422073 1.1:-51018376 None:intergenic
ATTACTTGATGTGCTGAGAT+TGG 0.422477 1.1:-51018454 None:intergenic
CCTCATATGGAAGCTGATCC+AGG 0.426677 1.1:+51018376 MS.gene89532:CDS
GGTATATAGAGTATCAGATA+TGG 0.427126 1.1:+51020536 MS.gene89532:intron
GCATCTTTGTAGTGGGGCGC+AGG 0.430270 1.1:-51018005 None:intergenic
CTGATTTGGCAAGTTCCGAC+TGG 0.435137 1.1:-51017910 None:intergenic
TCTATTAATTTGCCGCATGA+TGG 0.442110 1.1:+51017857 MS.gene89532:CDS
AACTGTGTTTGCAGTGAAAT+GGG 0.443834 1.1:+51018298 MS.gene89532:intron
ACTCCAATCATGTTCTCCTC+AGG 0.445874 1.1:-51020796 None:intergenic
TTGGAATTCTGGGAGGATGA+GGG 0.446295 1.1:-51014132 None:intergenic
CAAACCGGAGCAGAATATAA+TGG 0.448038 1.1:+51017401 MS.gene89532:CDS
TCATGCGGCAAATTAATAGA+AGG 0.456728 1.1:-51017854 None:intergenic
AGCATGTACGAAAGTGTCAC+TGG 0.459638 1.1:+51015051 MS.gene89532:CDS
TGCATGTATGCACCCTCATA+TGG 0.459866 1.1:+51018363 MS.gene89532:CDS
CGCGTTGAACTCTCTGAGCT+TGG 0.460612 1.1:+51017548 MS.gene89532:CDS
CTTGTCTTCAACACAAATAC+TGG 0.462774 1.1:-51016973 None:intergenic
AAAATCAGTTACAGGTAAAC+GGG 0.463268 1.1:-51017819 None:intergenic
GAAGACAAGGCGCTCGCTAC+GGG 0.464062 1.1:+51016987 MS.gene89532:CDS
ATCTGTTGAGGAAGCATTGA+GGG 0.465688 1.1:-51017665 None:intergenic
AGCTCCCATCCATTAGAATC+TGG 0.465836 1.1:-51017596 None:intergenic
AATTGCTTGAAGGTATTAGT+TGG 0.468045 1.1:+51015533 MS.gene89532:CDS
TGTACAAGAGTTTGTAATCC+TGG 0.469949 1.1:-51018394 None:intergenic
GGATGTCGAGTTGGTGATGT+TGG 0.470361 1.1:-51018433 None:intergenic
AATGTGAATGGCACTGGATC+TGG 0.470886 1.1:+51020766 MS.gene89532:CDS
TGGAAAGCGAGAGATGCAAT+AGG 0.471210 1.1:-51016740 None:intergenic
TCAATGCTTCCTCAACAGAT+TGG 0.475654 1.1:+51017668 MS.gene89532:CDS
AGTCGTACGTTGCTTCCTCC+AGG 0.477811 1.1:-51018498 None:intergenic
TGAGCTCCGGATATATTCCC+TGG 0.480311 1.1:+51018480 MS.gene89532:CDS
GGTTGTAGGAAGGAAAGCTT+AGG 0.485120 1.1:+51020719 MS.gene89532:intron
CTATTAATTTGCCGCATGAT+GGG 0.485445 1.1:+51017858 MS.gene89532:CDS
ACCGTGGGGCAGGCAATAAA+GGG 0.486720 1.1:-51015329 None:intergenic
CTTCCTCCAGGGAATATATC+CGG 0.487419 1.1:-51018486 None:intergenic
AAATTTGATTTCCAGGGTCG+AGG 0.494344 1.1:+51015272 MS.gene89532:intron
TCATTGCCTGACTTCAATCC+AGG 0.496863 1.1:+51018661 MS.gene89532:CDS
AACTGACCTGGATTGAAGTC+AGG 0.498949 1.1:-51018667 None:intergenic
GACATGTTGATCTGCGTCCT+GGG 0.499424 1.1:-51017257 None:intergenic
GGAAAATTCATACCTGGTGT+TGG 0.500969 1.1:-51014151 None:intergenic
ATCATCAATATATACAGTCT+TGG 0.501445 1.1:+51019956 MS.gene89532:CDS
ATCAAGTAATGTATGAGCTC+CGG 0.501752 1.1:+51018467 MS.gene89532:CDS
ATGTTGGAAGTCCAGGCTCC+TGG 0.502548 1.1:-51018417 None:intergenic
AGGCAATAAAGGGCAATACT+TGG 0.503801 1.1:-51015319 None:intergenic
ATGAAGTTCCGCTGATTCCA+TGG 0.504022 1.1:-51014091 None:intergenic
GTTGGTGATGTTGGAAGTCC+AGG 0.505185 1.1:-51018424 None:intergenic
GGCATCAATAACCTCACAAT+GGG 0.506104 1.1:+51017455 MS.gene89532:CDS
GCCCTTTATTGCCTGCCCCA+CGG 0.507234 1.1:+51015328 MS.gene89532:CDS
AACAGCAATTATTTCCCCAT+TGG 0.507326 1.1:-51016765 None:intergenic
GAGCATATTCTGCTCGCCTA+TGG 0.507585 1.1:+51019882 MS.gene89532:CDS
ACTAACCATCCTTGCAGAAA+AGG 0.507866 1.1:-51017620 None:intergenic
CAAAGTGTGGTCTCCTCTCA+TGG 0.508856 1.1:+51015129 MS.gene89532:CDS
TGAAGACAAGGCGCTCGCTA+CGG 0.509890 1.1:+51016986 MS.gene89532:CDS
TGCAGGTATGCTGATGCCAT+TGG 0.509948 1.1:-51017759 None:intergenic
CAATTATTTCCCCATTGGCA+TGG 0.510982 1.1:-51016760 None:intergenic
TTGGCCACAGAAGGACGCCT+TGG 0.512523 1.1:+51015552 MS.gene89532:CDS
TGGCCACAGAAGGACGCCTT+GGG 0.514365 1.1:+51015553 MS.gene89532:CDS
GCTTTCTAGTGCAGAGGATG+AGG 0.517539 1.1:+51020572 MS.gene89532:CDS
ACTCTTGTACACCAGGAGCC+TGG 0.517642 1.1:+51018406 MS.gene89532:CDS
AGAGCTATGACGTCGACCAT+AGG 0.518312 1.1:-51019898 None:intergenic
TCTCTCGCTTTCCATGCCAA+TGG 0.519282 1.1:+51016749 MS.gene89532:CDS
GACCGTACTTGTAATGTGAA+TGG 0.523270 1.1:+51020754 MS.gene89532:CDS
GGAAAGCGAGAGATGCAATA+GGG 0.526031 1.1:-51016739 None:intergenic
CGTCACCAGATTCTAATGGA+TGG 0.526206 1.1:+51017591 MS.gene89532:CDS
CAGCATGCTAGTAACGATGT+TGG 0.526306 1.1:+51017311 MS.gene89532:CDS
TTAGACGGCATCTTTGTAGT+GGG 0.528947 1.1:-51018012 None:intergenic
TAACCTCACAATGGGTGGTA+GGG 0.531061 1.1:+51017463 MS.gene89532:CDS
GTATCTGTCGTTGCAATGGA+TGG 0.531769 1.1:-51016527 None:intergenic
GCAATAGTAGACCGTGGGGC+AGG 0.533067 1.1:-51015339 None:intergenic
TTGTCACAAATGTTCATCCC+AGG 0.536231 1.1:+51017240 MS.gene89532:CDS
TGCTCCGGTTTGAGAGCTAG+TGG 0.536252 1.1:-51017390 None:intergenic
ATCAATATATACAGTCTTGG+AGG 0.536387 1.1:+51019959 MS.gene89532:CDS
TACCACATGTCGTCCTCTGC+AGG 0.539111 1.1:+51018038 MS.gene89532:CDS
GCTGCAGCATTTAGTCCAGA+TGG 0.539276 1.1:+51015360 MS.gene89532:CDS
TGAAACTGGAAATTGCTTGA+AGG 0.539434 1.1:+51015523 MS.gene89532:CDS
AGGTATTAGTTGGCCACAGA+AGG 0.539720 1.1:+51015543 MS.gene89532:CDS
TTGGTGGTGAACAGATTAGA+TGG 0.541889 1.1:-51017704 None:intergenic
ATGGCCATTATATTCTGCTC+CGG 0.541908 1.1:-51017405 None:intergenic
CCACCCAAGGCGTCCTTCTG+TGG 0.544228 1.1:-51015556 None:intergenic
ACTTGTAATGTGAATGGCAC+TGG 0.544885 1.1:+51020760 MS.gene89532:CDS
GCAGGTATGCTGATGCCATT+GGG 0.544979 1.1:-51017758 None:intergenic
CACAGCTAGCTCAACATTGG+TGG 0.546180 1.1:-51017720 None:intergenic
AAAGATATGGTGCCCCATGC+GGG 0.547922 1.1:-51017023 None:intergenic
TTGAGAGCTAGTGGGTATCT+CGG 0.549485 1.1:-51017381 None:intergenic
GCAAGTATCTGTCGTTGCAA+TGG 0.550367 1.1:-51016531 None:intergenic
ATGACAGAGGCAACATCTCA+TGG 0.552996 1.1:+51017188 MS.gene89532:CDS
ATCAATAACCTCACAATGGG+TGG 0.553944 1.1:+51017458 MS.gene89532:CDS
CAGGGTGCTTTCTAGTGCAG+AGG 0.555084 1.1:+51020566 MS.gene89532:CDS
ATAACCTCACAATGGGTGGT+AGG 0.558003 1.1:+51017462 MS.gene89532:CDS
GTCACCAGATTCTAATGGAT+GGG 0.560045 1.1:+51017592 MS.gene89532:CDS
GCATTGAGGGAACACCAACT+TGG 0.562253 1.1:-51017652 None:intergenic
CATCTTTGTAGTGGGGCGCA+GGG 0.564972 1.1:-51018004 None:intergenic
GTTAGACGGCATCTTTGTAG+TGG 0.565047 1.1:-51018013 None:intergenic
CAGTATTTGTGTTGAAGACA+AGG 0.566784 1.1:+51016974 MS.gene89532:CDS
TGCCATTCACATTACAAGTA+CGG 0.568037 1.1:-51020756 None:intergenic
TTTCTGCAAGGATGGTTAGT+CGG 0.570950 1.1:+51017623 MS.gene89532:CDS
CTCCAATCATGTTCTCCTCA+GGG 0.571222 1.1:-51020795 None:intergenic
ATGCCATTGGGCATTCCTGA+AGG 0.574190 1.1:-51017746 None:intergenic
CTGCAGCATTTAGTCCAGAT+GGG 0.574217 1.1:+51015361 MS.gene89532:CDS
AAGCCAAAGCTTACCACCCA+AGG 0.576210 1.1:-51015569 None:intergenic
AAACCTGATTGTAAAACTGC+AGG 0.577206 1.1:-51017776 None:intergenic
ATACCCACTAGCTCTCAAAC+CGG 0.582499 1.1:+51017386 MS.gene89532:CDS
CTGTTCTCGTTCTAGAACAG+TGG 0.583294 1.1:+51015100 MS.gene89532:CDS
CTGCAGCAATAGTAGACCGT+GGG 0.583872 1.1:-51015344 None:intergenic
TGCTGTTGCATCAGGTCACA+AGG 0.586241 1.1:+51016781 MS.gene89532:CDS
GTGAAAGAACCAATCTGTTG+AGG 0.587730 1.1:-51017677 None:intergenic
CTGGATCAGCTTCCATATGA+GGG 0.589361 1.1:-51018375 None:intergenic
TGATTCCATGGAAAATTCCA+TGG 0.590591 1.1:-51014079 None:intergenic
TGTTGGTTTGAGTAGCATGC+AGG 0.590711 1.1:+51017328 MS.gene89532:CDS
AATTCAACTCTTGACACTGG+TGG 0.591913 1.1:-51017287 None:intergenic
TAATTCTGTAGCAGCTGCAG+TGG 0.593424 1.1:-51017936 None:intergenic
GCTCCGGTTTGAGAGCTAGT+GGG 0.596135 1.1:-51017389 None:intergenic
TCTGGTGACGGAACAATCTG+AGG 0.598901 1.1:-51017578 None:intergenic
CCTCCCAGAATTCCAACACC+AGG 0.599555 1.1:+51014139 MS.gene89532:CDS
CGACATGTGGTATAGTTAGA+CGG 0.600026 1.1:-51018027 None:intergenic
ATCAGATATGGAACTTGTCA+GGG 0.600976 1.1:+51020548 MS.gene89532:CDS
AAAAGATATGGTGCCCCATG+CGG 0.601223 1.1:-51017024 None:intergenic
GTCGTACGTTGCTTCCTCCA+GGG 0.604411 1.1:-51018497 None:intergenic
CCTCACAATGGGTGGTAGGG+AGG 0.605498 1.1:+51017466 MS.gene89532:CDS
AGCAGAATATGCTCAGATGT+AGG 0.609510 1.1:-51019873 None:intergenic
ATTACAAACTCTTGTACACC+AGG 0.610235 1.1:+51018399 MS.gene89532:CDS
TCATTTAGAATATCCTCCAC+CGG 0.610636 1.1:+51017211 MS.gene89532:CDS
AGCATGCAGGTTGAACAATA+CGG 0.618359 1.1:+51017341 MS.gene89532:CDS
CCACAGAAGGACGCCTTGGG+TGG 0.618769 1.1:+51015556 MS.gene89532:CDS
GCATGTACGAAAGTGTCACT+GGG 0.618857 1.1:+51015052 MS.gene89532:CDS
CCACCTTCAGGAATGCCCAA+TGG 0.620224 1.1:+51017743 MS.gene89532:CDS
CATTATAAATCGAATCCAGT+CGG 0.622471 1.1:+51017895 MS.gene89532:CDS
TGGCACAGCTAGCTCAACAT+TGG 0.624707 1.1:-51017723 None:intergenic
GTCGGAACTTGCCAAATCAG+TGG 0.625008 1.1:+51017913 MS.gene89532:CDS
AATCTGTTGAGGAAGCATTG+AGG 0.627493 1.1:-51017666 None:intergenic
CCATTGGGCATTCCTGAAGG+TGG 0.630429 1.1:-51017743 None:intergenic
TGGCATCAATAACCTCACAA+TGG 0.635026 1.1:+51017454 MS.gene89532:CDS
TCAGTTACAGGTAAACGGGA+TGG 0.636538 1.1:-51017815 None:intergenic
AACGACAGATACTTGCTAGT+GGG 0.637390 1.1:+51016538 MS.gene89532:CDS
GCTGAGATTGGATGTCGAGT+TGG 0.638438 1.1:-51018442 None:intergenic
CAACGACAGATACTTGCTAG+TGG 0.639744 1.1:+51016537 MS.gene89532:CDS
TGCAATTCAACTCTTGACAC+TGG 0.641673 1.1:-51017290 None:intergenic
TTCAGATTGCTCAATGACAG+AGG 0.641679 1.1:+51017175 MS.gene89532:CDS
ACTTCAGAAGGTACCTGCAG+AGG 0.645206 1.1:-51018051 None:intergenic
AGTTGTGTAAGTACCATGAG+AGG 0.649049 1.1:-51015142 None:intergenic
TACTGTGTCAGTTGTACGTG+TGG 0.650194 1.1:+51016920 MS.gene89532:intron
TAGACGGCATCTTTGTAGTG+GGG 0.650831 1.1:-51018011 None:intergenic
AATTGCAACTTACTGTGTGG+AGG 0.655631 1.1:-51015394 None:intergenic
GTTGTAGGAAGGAAAGCTTA+GGG 0.656714 1.1:+51020720 MS.gene89532:intron
CCTCCCTACCACCCATTGTG+AGG 0.659125 1.1:-51017466 None:intergenic
CATCCATTAGAATCTGGTGA+CGG 0.670518 1.1:-51017590 None:intergenic
TTAGTCGGTCAAAGCCAAGT+TGG 0.670959 1.1:+51017638 MS.gene89532:CDS
TACCTGCAGAGGACGACATG+TGG 0.671719 1.1:-51018040 None:intergenic
TGCAGAGGATGAGGTCAATG+TGG 0.674617 1.1:+51020581 MS.gene89532:CDS
GCTGCAGCAATAGTAGACCG+TGG 0.674851 1.1:-51015345 None:intergenic
AGGGTGCATACATGCAACAC+AGG 0.677223 1.1:-51018356 None:intergenic
TGGCTATCAAACCCATCATG+CGG 0.678387 1.1:-51017869 None:intergenic
GTGCATACATGCAACACAGG+CGG 0.681773 1.1:-51018353 None:intergenic
TCTCGCTTTCCATGCCAATG+GGG 0.682220 1.1:+51016751 MS.gene89532:CDS
AATCAATGATCTTAACTGTG+TGG 0.684417 1.1:-51015499 None:intergenic
AGGGCTTGTCTATGGAACCA+AGG 0.695022 1.1:+51020629 MS.gene89532:CDS
GGGATGCTAGCTCATCAGAG+TGG 0.698330 1.1:+51016586 MS.gene89532:CDS
TGGATCTGGTTACTTCCCTG+AGG 0.705098 1.1:+51020780 MS.gene89532:CDS
ACAGTGGTAGATGCAAAGTG+TGG 0.719121 1.1:+51015116 MS.gene89532:CDS
TGCAGCAATAGTAGACCGTG+GGG 0.726709 1.1:-51015343 None:intergenic
GAGGGTTGATCATGACACAG+AGG 0.745622 1.1:-51014114 None:intergenic
GCTCCGGATATATTCCCTGG+AGG 0.749636 1.1:+51018483 MS.gene89532:CDS
CCTGGTGTTGGAATTCTGGG+AGG 0.755260 1.1:-51014139 None:intergenic
CATGTACGAAAGTGTCACTG+GGG 0.771233 1.1:+51015053 MS.gene89532:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTATTTTTAAATTT+GGG + chr1.1:51014972-51014991 MS.gene89532:intron 0.0%
!!! TTTATTTTTATTTTTAAATT+TGG + chr1.1:51014971-51014990 MS.gene89532:intron 0.0%
!! AACTTAAAAAAAAAATACTT+AGG - chr1.1:51014292-51014311 None:intergenic 10.0%
!! TATAATCTCTATATAATTAT+TGG + chr1.1:51020327-51020346 MS.gene89532:intron 10.0%
!! AAAATAGAAATATGATTATG+AGG - chr1.1:51019494-51019513 None:intergenic 15.0%
!! AAAATTACTTCAAAATACTT+AGG - chr1.1:51014489-51014508 None:intergenic 15.0%
!! AATAACCACATAATTATTTA+GGG - chr1.1:51014403-51014422 None:intergenic 15.0%
!! ATATAAAACTATTATTCACT+TGG - chr1.1:51015666-51015685 None:intergenic 15.0%
!! CTCAAAATAAAATAAAAAAG+AGG + chr1.1:51018820-51018839 MS.gene89532:intron 15.0%
!! TAAAAATAAAAAATCATGTG+AGG - chr1.1:51014961-51014980 None:intergenic 15.0%
!! TAATAACCACATAATTATTT+AGG - chr1.1:51014404-51014423 None:intergenic 15.0%
!! TTCAAAAATTTAAAGGTTTA+AGG - chr1.1:51018918-51018937 None:intergenic 15.0%
!!! AATCAAAAAATTACTTTTCT+TGG + chr1.1:51019808-51019827 MS.gene89532:intron 15.0%
!!! AATGCACTTATTTTTTTTTA+TGG + chr1.1:51020204-51020223 MS.gene89532:intron 15.0%
!!! ATAAATTTTAATGATATGCT+TGG - chr1.1:51018580-51018599 None:intergenic 15.0%
!!! ATCATTTTTTACAAGTTAAT+TGG + chr1.1:51014597-51014616 MS.gene89532:intron 15.0%
!!! ATGCACTTATTTTTTTTTAT+GGG + chr1.1:51020205-51020224 MS.gene89532:intron 15.0%
!!! ATTTTTAAATTTGATTTCCA+GGG + chr1.1:51015266-51015285 MS.gene89532:intron 15.0%
!!! CTATAAAAACTATTACTTTT+TGG + chr1.1:51017097-51017116 MS.gene89532:intron 15.0%
!!! CTCTTTTTTATTTTATTTTG+AGG - chr1.1:51018822-51018841 None:intergenic 15.0%
!!! GAATACATTATTCTTTTTTT+GGG + chr1.1:51018747-51018766 MS.gene89532:intron 15.0%
!!! TATTTTGTTTAATTGTGATT+TGG + chr1.1:51016891-51016910 MS.gene89532:intron 15.0%
!!! TCATTTTTTACAAGTTAATT+GGG + chr1.1:51014598-51014617 MS.gene89532:intron 15.0%
!!! TGAATACATTATTCTTTTTT+TGG + chr1.1:51018746-51018765 MS.gene89532:intron 15.0%
!! AAAAGAAATGAAAAGGAAAA+AGG - chr1.1:51015610-51015629 None:intergenic 20.0%
!! AAAGTTGTTATAGAAATGTT+TGG + chr1.1:51018226-51018245 MS.gene89532:intron 20.0%
!! AAATAGGTAAGTAAACTATT+AGG - chr1.1:51019717-51019736 None:intergenic 20.0%
!! AATAAACTAATTGATCAAGT+CGG - chr1.1:51015763-51015782 None:intergenic 20.0%
!! AATGTGATTAACAATAGAAA+AGG - chr1.1:51016652-51016671 None:intergenic 20.0%
!! ATATATCTCATCAAACTTAA+TGG - chr1.1:51015981-51016000 None:intergenic 20.0%
!! ATATGAAAGTAATGAAAATC+TGG + chr1.1:51019048-51019067 MS.gene89532:intron 20.0%
!! ATGCTGAACATAAATTAAAA+AGG - chr1.1:51019460-51019479 None:intergenic 20.0%
!! ATGTGATTAACAATAGAAAA+GGG - chr1.1:51016651-51016670 None:intergenic 20.0%
!! GAATATTAACAAAGAAGATA+TGG - chr1.1:51014175-51014194 None:intergenic 20.0%
!! TAAAACACAAACAAATTCAA+AGG - chr1.1:51020516-51020535 None:intergenic 20.0%
!! TAAGGATAATTAATCCAAAT+TGG - chr1.1:51018900-51018919 None:intergenic 20.0%
!! TAATACTTCCATTAAATTAG+AGG - chr1.1:51020130-51020149 None:intergenic 20.0%
!! TCTAAATACCTCTAATTTAA+TGG + chr1.1:51020119-51020138 MS.gene89532:intron 20.0%
!! TGCTAAAAAATTCAAAATTG+TGG - chr1.1:51018986-51019005 None:intergenic 20.0%
!! TTAAACCCTAAATAATTATG+TGG + chr1.1:51014395-51014414 MS.gene89532:intron 20.0%
!!! ATTTGGAATAATGTGTTAAT+CGG + chr1.1:51016490-51016509 MS.gene89532:intron 20.0%
!!! ATTTTTGTGTCAAAAAAACA+AGG - chr1.1:51019299-51019318 None:intergenic 20.0%
!!! CATTTTTAAATTTGATTTCC+AGG + chr1.1:51015265-51015284 MS.gene89532:intron 20.0%
!!! GATAATTTTAGATTGAGAAA+AGG - chr1.1:51019998-51020017 None:intergenic 20.0%
!!! GTTAAATTTTGAAGTTGAAT+TGG + chr1.1:51014462-51014481 MS.gene89532:intron 20.0%
!!! TACATTTCTTTTAACAGATT+TGG + chr1.1:51018605-51018624 MS.gene89532:intron 20.0%
!!! TTACTTAACTTCCTTTTATT+AGG - chr1.1:51015900-51015919 None:intergenic 20.0%
!!! TTACTTTCATATTGAACTTT+TGG - chr1.1:51019040-51019059 None:intergenic 20.0%
!!! TTGATTCTTTTGTACTTTTT+GGG + chr1.1:51016283-51016302 MS.gene89532:intron 20.0%
!!! TTGTTTTTATAGTCTTCATT+TGG + chr1.1:51016473-51016492 MS.gene89532:intron 20.0%
!!! TTTGAATTTGTTTGTGTTTT+AGG + chr1.1:51020515-51020534 MS.gene89532:intron 20.0%
!!! TTTGATTCTTTTGTACTTTT+TGG + chr1.1:51016282-51016301 MS.gene89532:intron 20.0%
!!! TTTTTGTGTCAAAAAAACAA+GGG - chr1.1:51019298-51019317 None:intergenic 20.0%
! AAATATGATTATGAGGATTG+AGG - chr1.1:51019487-51019506 None:intergenic 25.0%
! AAATTCACAATAAACAAGGT+GGG - chr1.1:51014910-51014929 None:intergenic 25.0%
! AACAATAATGAATTCGACAT+TGG - chr1.1:51014864-51014883 None:intergenic 25.0%
! AATATGATTATGAGGATTGA+GGG - chr1.1:51019486-51019505 None:intergenic 25.0%
! AATCATTAATCAACAACAAC+AGG - chr1.1:51015794-51015813 None:intergenic 25.0%
! ACTGTATTGTTTAACATTGT+AGG + chr1.1:51019370-51019389 MS.gene89532:intron 25.0%
! AGTTAATTTACTTTATCACC+TGG + chr1.1:51018686-51018705 MS.gene89532:intron 25.0%
! ATAAACTCAACTCCATAAAT+TGG - chr1.1:51016016-51016035 None:intergenic 25.0%
! ATAAAGTAAATTAACTGACC+TGG - chr1.1:51018682-51018701 None:intergenic 25.0%
! ATAATTATTGGTCAACAAGT+AGG + chr1.1:51020339-51020358 MS.gene89532:intron 25.0%
! ATACATATGATATTCGATTC+TGG + chr1.1:51014213-51014232 MS.gene89532:intron 25.0%
! ATACATGTTAACTTAACAGT+AGG + chr1.1:51019160-51019179 MS.gene89532:intron 25.0%
! ATCATCAATATATACAGTCT+TGG + chr1.1:51019956-51019975 MS.gene89532:CDS 25.0%
! CTTCAAATTCACAATAAACA+AGG - chr1.1:51014914-51014933 None:intergenic 25.0%
! GGGATGATAACAAAAAAAAT+TGG + chr1.1:51014618-51014637 MS.gene89532:intron 25.0%
! GGTATAAATTATACACTGAA+CGG - chr1.1:51015173-51015192 None:intergenic 25.0%
! GTTTGTATTACACAAACAAA+AGG + chr1.1:51019655-51019674 MS.gene89532:intron 25.0%
! TACATGTTAACTTAACAGTA+GGG + chr1.1:51019161-51019180 MS.gene89532:intron 25.0%
! TATGTGGTTATTAATTCTCA+GGG + chr1.1:51014411-51014430 MS.gene89532:intron 25.0%
! TGGTATAAAATTGAATGCAA+CGG - chr1.1:51016174-51016193 None:intergenic 25.0%
! TGTGATTAACAATAGAAAAG+GGG - chr1.1:51016650-51016669 None:intergenic 25.0%
! TTAAGTAAGAAATCTGTACT+GGG + chr1.1:51015912-51015931 MS.gene89532:intron 25.0%
! TTAATGTTTAGTTGTTGTGT+TGG + chr1.1:51020378-51020397 MS.gene89532:intron 25.0%
! TTATGTGGTTATTAATTCTC+AGG + chr1.1:51014410-51014429 MS.gene89532:intron 25.0%
! TTCTCATATTCTGTAACTAT+GGG - chr1.1:51016398-51016417 None:intergenic 25.0%
! TTCTCTTTGATGAACTTAAT+GGG + chr1.1:51016700-51016719 MS.gene89532:intron 25.0%
! TTGTTTGTGTAATACAAACA+AGG - chr1.1:51019654-51019673 None:intergenic 25.0%
! TTTCTCTTTGATGAACTTAA+TGG + chr1.1:51016699-51016718 MS.gene89532:intron 25.0%
!! AAATTCGTGTATTTTTCATC+CGG - chr1.1:51014645-51014664 None:intergenic 25.0%
!! ATTGAATTTTTGTGTGCTTT+TGG + chr1.1:51015461-51015480 MS.gene89532:intron 25.0%
!! GTTTTGCTTACAATCAAATT+TGG + chr1.1:51020283-51020302 MS.gene89532:intron 25.0%
!! TTAACTTCCTTTTATTAGGA+CGG - chr1.1:51015896-51015915 None:intergenic 25.0%
!! TTAAGTTAGCTGAGATTTTT+AGG + chr1.1:51014361-51014380 MS.gene89532:intron 25.0%
!! TTCTTTTAACAGATTTGGAT+CGG + chr1.1:51018610-51018629 MS.gene89532:intron 25.0%
!! TTGTTTAATTGTGATTTGGA+TGG + chr1.1:51016895-51016914 MS.gene89532:intron 25.0%
!!! CAAAAAATTACTTTTCTTGG+TGG + chr1.1:51019811-51019830 MS.gene89532:intron 25.0%
!!! CAAAAGGCTTTGTTTTTATT+CGG - chr1.1:51015194-51015213 None:intergenic 25.0%
!!! TTATTTTTAAATTTGGGCAG+TGG + chr1.1:51014978-51014997 MS.gene89532:intron 25.0%
!!! TTCTTTTTTGTCACCATATT+TGG + chr1.1:51017123-51017142 MS.gene89532:intron 25.0%
!!! TTGTAAAGTGAGTTTGATTT+TGG + chr1.1:51016210-51016229 MS.gene89532:intron 25.0%
AAAATCAGTTACAGGTAAAC+GGG - chr1.1:51017822-51017841 None:intergenic 30.0%
AAAGAGTCTGTGATTCAAAT+TGG - chr1.1:51015438-51015457 None:intergenic 30.0%
AAATACATGAATGAGATGAC+TGG - chr1.1:51020455-51020474 None:intergenic 30.0%
AACATAGACTGATTACTTGA+TGG + chr1.1:51018186-51018205 MS.gene89532:intron 30.0%
AATACATGAATGAGATGACT+GGG - chr1.1:51020454-51020473 None:intergenic 30.0%
AATCAATGATCTTAACTGTG+TGG - chr1.1:51015502-51015521 None:intergenic 30.0%
AGATATGGAAAATTCATACC+TGG - chr1.1:51014160-51014179 None:intergenic 30.0%
ATCAATATATACAGTCTTGG+AGG + chr1.1:51019959-51019978 MS.gene89532:CDS 30.0%
ATGCCAATTCTCATTTGATT+AGG - chr1.1:51017440-51017459 None:intergenic 30.0%
ATGTTGTTGAATGATTGTTG+AGG + chr1.1:51014714-51014733 MS.gene89532:intron 30.0%
ATTAAACTCGTTGACAACTT+AGG + chr1.1:51014737-51014756 MS.gene89532:intron 30.0%
CAAAATCAGTTACAGGTAAA+CGG - chr1.1:51017823-51017842 None:intergenic 30.0%
CAAACAAAAGGTAAATCCAT+TGG + chr1.1:51019667-51019686 MS.gene89532:intron 30.0%
CAAATTCACAATAAACAAGG+TGG - chr1.1:51014911-51014930 None:intergenic 30.0%
CATTATAAATCGAATCCAGT+CGG + chr1.1:51017895-51017914 MS.gene89532:CDS 30.0%
CCAGACAAAAAGAAATGAAA+AGG - chr1.1:51015617-51015636 None:intergenic 30.0%
GAATCTTCTGAATCAAAATC+TGG + chr1.1:51015077-51015096 MS.gene89532:CDS 30.0%
GAATTCATTATTGTTAGCTG+TGG + chr1.1:51014869-51014888 MS.gene89532:intron 30.0%
GAGCTCAAAAATTGATTACT+AGG - chr1.1:51019075-51019094 None:intergenic 30.0%
GATAACAAAAAAAATTGGCC+CGG + chr1.1:51014623-51014642 MS.gene89532:intron 30.0%
GATAACAATTATAGTGCCAA+TGG - chr1.1:51019686-51019705 None:intergenic 30.0%
GCACTGTTAACTTAAAAGTA+TGG + chr1.1:51017963-51017982 MS.gene89532:CDS 30.0%
GGATTCGATTTATAATGGTT+TGG - chr1.1:51017892-51017911 None:intergenic 30.0%
GTAATACAAACAAGGACAAA+AGG - chr1.1:51019646-51019665 None:intergenic 30.0%
GTTAAGTAAGAAATCTGTAC+TGG + chr1.1:51015911-51015930 MS.gene89532:intron 30.0%
GTTCTCATATTCTGTAACTA+TGG - chr1.1:51016399-51016418 None:intergenic 30.0%
TACTAGCAACAATTGTTGAA+AGG - chr1.1:51018527-51018546 None:intergenic 30.0%
TGCAACTTCAAGACAAAAAT+AGG - chr1.1:51019733-51019752 None:intergenic 30.0%
TTAAACTCGTTGACAACTTA+GGG + chr1.1:51014738-51014757 MS.gene89532:intron 30.0%
TTGCATAATTTACATCAACC+AGG - chr1.1:51018707-51018726 None:intergenic 30.0%
TTGCCTAATCAAATGAGAAT+TGG + chr1.1:51017434-51017453 MS.gene89532:CDS 30.0%
TTTCTCGTGCTCATAAAAAA+AGG - chr1.1:51019235-51019254 None:intergenic 30.0%
TTTGATTAGGCAAAGTAGTA+TGG - chr1.1:51017427-51017446 None:intergenic 30.0%
! AAGATCATTGATTGTGAAAC+TGG + chr1.1:51015509-51015528 MS.gene89532:CDS 30.0%
! AATTCGTGTATTTTTCATCC+GGG - chr1.1:51014644-51014663 None:intergenic 30.0%
! AGTTATTTGAACTTAGCTTG+AGG + chr1.1:51014542-51014561 MS.gene89532:intron 30.0%
! ATGAAAGCAGGTAATTTTCA+AGG - chr1.1:51018792-51018811 None:intergenic 30.0%
! ATGTATGGTGGGAATAAATA+TGG - chr1.1:51014816-51014835 None:intergenic 30.0%
! ATTTTTGTCTTGAAGTTGCA+TGG + chr1.1:51019733-51019752 MS.gene89532:intron 30.0%
! CATTCTAAAAATGTCGTTCA+TGG - chr1.1:51020188-51020207 None:intergenic 30.0%
! CCTTTTCATTTCTTTTTGTC+TGG + chr1.1:51015614-51015633 MS.gene89532:intron 30.0%
! GGTATATAGAGTATCAGATA+TGG + chr1.1:51020536-51020555 MS.gene89532:intron 30.0%
! GTTATTTGAACTTAGCTTGA+GGG + chr1.1:51014543-51014562 MS.gene89532:intron 30.0%
! TAACTTCCTTTTATTAGGAC+GGG - chr1.1:51015895-51015914 None:intergenic 30.0%
! TAATTGACTTTCCTAGAGAA+AGG - chr1.1:51015235-51015254 None:intergenic 30.0%
! TGAAAGCAGGTAATTTTCAA+GGG - chr1.1:51018791-51018810 None:intergenic 30.0%
! TGAATTTGTTTCCTTTCTCT+AGG + chr1.1:51015221-51015240 MS.gene89532:intron 30.0%
! TTCTTTTATTCGAGACATGA+GGG - chr1.1:51020067-51020086 None:intergenic 30.0%
! TTTCTTTTATTCGAGACATG+AGG - chr1.1:51020068-51020087 None:intergenic 30.0%
! TTTTTGTCTTGAAGTTGCAT+GGG + chr1.1:51019734-51019753 MS.gene89532:intron 30.0%
!! AATTGCTTGAAGGTATTAGT+TGG + chr1.1:51015533-51015552 MS.gene89532:CDS 30.0%
!! ACTGACTTGGATTAATTAAC+TGG + chr1.1:51017065-51017084 MS.gene89532:intron 30.0%
!! GCTATTACTGAATTTGTTGT+TGG + chr1.1:51016676-51016695 MS.gene89532:intron 30.0%
!! TCACTGTATTGATTCAACTA+GGG + chr1.1:51014512-51014531 MS.gene89532:intron 30.0%
!! TTATACCATGTTATTTCCCA+TGG + chr1.1:51016186-51016205 MS.gene89532:intron 30.0%
!! TTCACTGTATTGATTCAACT+AGG + chr1.1:51014511-51014530 MS.gene89532:intron 30.0%
!!! AATCCAAATTGGTTTTAGCA+GGG - chr1.1:51018889-51018908 None:intergenic 30.0%
!!! ACTTTTAAGTTAACAGTGCA+AGG - chr1.1:51017962-51017981 None:intergenic 30.0%
!!! TAATCCAAATTGGTTTTAGC+AGG - chr1.1:51018890-51018909 None:intergenic 30.0%
!!! TTTTTTATGAGCACGAGAAA+TGG + chr1.1:51019235-51019254 MS.gene89532:intron 30.0%
AAACCTGATTGTAAAACTGC+AGG - chr1.1:51017779-51017798 None:intergenic 35.0%
AAACTCACTTTACAAGCCAT+GGG - chr1.1:51016205-51016224 None:intergenic 35.0%
AACAACCAAAATTGAGTAGC+TGG - chr1.1:51016067-51016086 None:intergenic 35.0%
AACAATAGAAAAGGGGAGAT+GGG - chr1.1:51016643-51016662 None:intergenic 35.0%
AACAGCAATTATTTCCCCAT+TGG - chr1.1:51016768-51016787 None:intergenic 35.0%
AACTGTGTTTGCAGTGAAAT+GGG + chr1.1:51018298-51018317 MS.gene89532:intron 35.0%
AAGCATGCTAAGCATATGTA+TGG - chr1.1:51014831-51014850 None:intergenic 35.0%
ACAAATTCACAGTCGACAAA+AGG - chr1.1:51015210-51015229 None:intergenic 35.0%
ACACTATATCAATCACATGC+TGG - chr1.1:51018098-51018117 None:intergenic 35.0%
ACATTTGTGACAAAAACAGC+CGG - chr1.1:51017233-51017252 None:intergenic 35.0%
ACCTGAGCAGTTAAAAGATA+TGG - chr1.1:51017039-51017058 None:intergenic 35.0%
ACTTGGCATTAGAGATTACA+GGG - chr1.1:51016366-51016385 None:intergenic 35.0%
AGATTGCCAAAATCAGTTAC+AGG - chr1.1:51017830-51017849 None:intergenic 35.0%
ATAATGTGTTAATCGGCTAC+AGG + chr1.1:51016497-51016516 MS.gene89532:intron 35.0%
ATCAAGTAATGTATGAGCTC+CGG + chr1.1:51018467-51018486 MS.gene89532:CDS 35.0%
ATCAGATATGGAACTTGTCA+GGG + chr1.1:51020548-51020567 MS.gene89532:CDS 35.0%
ATCTACCACATGGTGAAAAA+TGG - chr1.1:51018327-51018346 None:intergenic 35.0%
ATGCTAAGCATATGTATGGT+GGG - chr1.1:51014827-51014846 None:intergenic 35.0%
ATTACAAACTCTTGTACACC+AGG + chr1.1:51018399-51018418 MS.gene89532:CDS 35.0%
ATTACTTGATGTGCTGAGAT+TGG - chr1.1:51018457-51018476 None:intergenic 35.0%
CAAATCTTAGATCCGATTCA+AGG - chr1.1:51015737-51015756 None:intergenic 35.0%
CAACAAGTAGGCACTATTTA+TGG + chr1.1:51020351-51020370 MS.gene89532:intron 35.0%
CAGTATTTGTGTTGAAGACA+AGG + chr1.1:51016974-51016993 MS.gene89532:CDS 35.0%
CATGAGTACTTCTATGAAAG+AGG + chr1.1:51016312-51016331 MS.gene89532:intron 35.0%
CGACTGGATTCGATTTATAA+TGG - chr1.1:51017897-51017916 None:intergenic 35.0%
CTTGTCTTCAACACAAATAC+TGG - chr1.1:51016976-51016995 None:intergenic 35.0%
GATAGGTTCATAACTTCAGA+AGG - chr1.1:51018066-51018085 None:intergenic 35.0%
GTCACACTATCAAGCATTTA+TGG - chr1.1:51014673-51014692 None:intergenic 35.0%
TAACAATAGAAAAGGGGAGA+TGG - chr1.1:51016644-51016663 None:intergenic 35.0%
TACAGTCTTGGAGGTAAAAA+TGG + chr1.1:51019968-51019987 MS.gene89532:intron 35.0%
TACATACCCGTCCTAATAAA+AGG + chr1.1:51015886-51015905 MS.gene89532:intron 35.0%
TATCAGATATGGAACTTGTC+AGG + chr1.1:51020547-51020566 MS.gene89532:CDS 35.0%
TCACCAAAGGTTATAACACA+TGG - chr1.1:51016842-51016861 None:intergenic 35.0%
TCATGCGGCAAATTAATAGA+AGG - chr1.1:51017857-51017876 None:intergenic 35.0%
TCTACCACATGGTGAAAAAT+GGG - chr1.1:51018326-51018345 None:intergenic 35.0%
TGAAACTGGAAATTGCTTGA+AGG + chr1.1:51015523-51015542 MS.gene89532:CDS 35.0%
TGAGGACTAAAAATGAAAGC+AGG - chr1.1:51018804-51018823 None:intergenic 35.0%
TGCCATTCACATTACAAGTA+CGG - chr1.1:51020759-51020778 None:intergenic 35.0%
TGGTTATTAATTCTCAGGGT+TGG + chr1.1:51014415-51014434 MS.gene89532:intron 35.0%
TGTACAAGAGTTTGTAATCC+TGG - chr1.1:51018397-51018416 None:intergenic 35.0%
! AAATGTTTGGAGTGACTTTG+TGG + chr1.1:51018239-51018258 MS.gene89532:intron 35.0%
! ACTAACCAGCTACTCAATTT+TGG + chr1.1:51016059-51016078 MS.gene89532:intron 35.0%
! ATACCTGCAGTTTTACAATC+AGG + chr1.1:51017773-51017792 MS.gene89532:CDS 35.0%
! GAAATAATTGCTGTTGCATC+AGG + chr1.1:51016773-51016792 MS.gene89532:CDS 35.0%
! GCGTGCAGGAAAATTTTATA+GGG + chr1.1:51019193-51019212 MS.gene89532:intron 35.0%
! TCATAGTGTAGCTCTACTAT+AGG - chr1.1:51015864-51015883 None:intergenic 35.0%
! TCATTTAGAATATCCTCCAC+CGG + chr1.1:51017211-51017230 MS.gene89532:CDS 35.0%
! TGCGTGCAGGAAAATTTTAT+AGG + chr1.1:51019192-51019211 MS.gene89532:intron 35.0%
! TTGCATTCAAAAGCATACCT+TGG - chr1.1:51020649-51020668 None:intergenic 35.0%
! TTTCGTACATGCTTGTTTCT+AGG - chr1.1:51015044-51015063 None:intergenic 35.0%
! TTTTAGCAGGGACTAAAACT+GGG - chr1.1:51018877-51018896 None:intergenic 35.0%
!! ACCATATCTTTTAACTGCTC+AGG + chr1.1:51017035-51017054 MS.gene89532:CDS 35.0%
!! CGTTTACCTGTAACTGATTT+TGG + chr1.1:51017821-51017840 MS.gene89532:CDS 35.0%
!! CTATTAATTTGCCGCATGAT+GGG + chr1.1:51017858-51017877 MS.gene89532:CDS 35.0%
!! CTGAAAAGCATTGTCATTGA+TGG + chr1.1:51019924-51019943 MS.gene89532:CDS 35.0%
!! TCTATTAATTTGCCGCATGA+TGG + chr1.1:51017857-51017876 MS.gene89532:CDS 35.0%
!!! ATGGAAGTTGGTGATTTTGT+AGG + chr1.1:51019254-51019273 MS.gene89532:intron 35.0%
!!! TGGAAGTTGGTGATTTTGTA+GGG + chr1.1:51019255-51019274 MS.gene89532:intron 35.0%
AAGGTAGAACATGTCACCAA+AGG - chr1.1:51016855-51016874 None:intergenic 40.0%
AATTCAACTCTTGACACTGG+TGG - chr1.1:51017290-51017309 None:intergenic 40.0%
AATTGCAACTTACTGTGTGG+AGG - chr1.1:51015397-51015416 None:intergenic 40.0%
ACAAACACTAAGACTGTGCT+AGG - chr1.1:51016457-51016476 None:intergenic 40.0%
ACAAGCCATGGGAAATAACA+TGG - chr1.1:51016194-51016213 None:intergenic 40.0%
ACTAACCATCCTTGCAGAAA+AGG - chr1.1:51017623-51017642 None:intergenic 40.0%
ACTTGTAATGTGAATGGCAC+TGG + chr1.1:51020760-51020779 MS.gene89532:CDS 40.0%
AGCAGAATATGCTCAGATGT+AGG - chr1.1:51019876-51019895 None:intergenic 40.0%
AGGCAATAAAGGGCAATACT+TGG - chr1.1:51015322-51015341 None:intergenic 40.0%
AGTCCCTGCTAAAACCAATT+TGG + chr1.1:51018883-51018902 MS.gene89532:intron 40.0%
AGTTGTGTAAGTACCATGAG+AGG - chr1.1:51015145-51015164 None:intergenic 40.0%
ATCAATAACCTCACAATGGG+TGG + chr1.1:51017458-51017477 MS.gene89532:CDS 40.0%
ATCAGGACATATGCCTAGAA+CGG - chr1.1:51016421-51016440 None:intergenic 40.0%
ATGGCCATTATATTCTGCTC+CGG - chr1.1:51017408-51017427 None:intergenic 40.0%
CAAACCGGAGCAGAATATAA+TGG + chr1.1:51017401-51017420 MS.gene89532:CDS 40.0%
CAAACTCACTTTACAAGCCA+TGG - chr1.1:51016206-51016225 None:intergenic 40.0%
CAAAGGTTATAACACATGGC+AGG - chr1.1:51016838-51016857 None:intergenic 40.0%
CAACTGTGTTTGCAGTGAAA+TGG + chr1.1:51018297-51018316 MS.gene89532:intron 40.0%
CAATTATTTCCCCATTGGCA+TGG - chr1.1:51016763-51016782 None:intergenic 40.0%
CACTTGGCATTAGAGATTAC+AGG - chr1.1:51016367-51016386 None:intergenic 40.0%
CAGAATATGAGAACCGTTCT+AGG + chr1.1:51016405-51016424 MS.gene89532:intron 40.0%
CATCCATTAGAATCTGGTGA+CGG - chr1.1:51017593-51017612 None:intergenic 40.0%
CATCCCATAAACGAACTTCT+TGG - chr1.1:51016572-51016591 None:intergenic 40.0%
CATGCTAAGCATATGTATGG+TGG - chr1.1:51014828-51014847 None:intergenic 40.0%
CATTACAAGTACGGTCAAAC+TGG - chr1.1:51020750-51020769 None:intergenic 40.0%
CCATATTTGGATTGATGTGC+AGG + chr1.1:51017136-51017155 MS.gene89532:intron 40.0%
CCTGCACATCAATCCAAATA+TGG - chr1.1:51017139-51017158 None:intergenic 40.0%
CGACATGTGGTATAGTTAGA+CGG - chr1.1:51018030-51018049 None:intergenic 40.0%
CTCGTGCTCATAAAAAAAGG+TGG - chr1.1:51019232-51019251 None:intergenic 40.0%
CTGCCATGTGTTATAACCTT+TGG + chr1.1:51016836-51016855 MS.gene89532:intron 40.0%
CTGTAATCTCTAATGCCAAG+TGG + chr1.1:51016365-51016384 MS.gene89532:intron 40.0%
GACCGTACTTGTAATGTGAA+TGG + chr1.1:51020754-51020773 MS.gene89532:CDS 40.0%
GGAAAATTCATACCTGGTGT+TGG - chr1.1:51014154-51014173 None:intergenic 40.0%
GGACCAAGAAGTTCGTTTAT+GGG + chr1.1:51016566-51016585 MS.gene89532:CDS 40.0%
GGCATCAATAACCTCACAAT+GGG + chr1.1:51017455-51017474 MS.gene89532:CDS 40.0%
GTGAAAGAACCAATCTGTTG+AGG - chr1.1:51017680-51017699 None:intergenic 40.0%
GTGGCACTACAAAAATGCAA+GGG + chr1.1:51016939-51016958 MS.gene89532:CDS 40.0%
GTTGTAGGAAGGAAAGCTTA+GGG + chr1.1:51020720-51020739 MS.gene89532:intron 40.0%
TAACCCATGTCTCCTTGAAT+CGG + chr1.1:51015722-51015741 MS.gene89532:intron 40.0%
TATAACACATGGCAGGTTCT+CGG - chr1.1:51016831-51016850 None:intergenic 40.0%
TCAATGCTTCCTCAACAGAT+TGG + chr1.1:51017668-51017687 MS.gene89532:CDS 40.0%
TCCAATTGCAACTTACTGTG+TGG - chr1.1:51015400-51015419 None:intergenic 40.0%
TCCACACAGTAAGTTGCAAT+TGG + chr1.1:51015396-51015415 MS.gene89532:intron 40.0%
TGCAATTCAACTCTTGACAC+TGG - chr1.1:51017293-51017312 None:intergenic 40.0%
TGGACCAAGAAGTTCGTTTA+TGG + chr1.1:51016565-51016584 MS.gene89532:CDS 40.0%
TGGCATCAATAACCTCACAA+TGG + chr1.1:51017454-51017473 MS.gene89532:CDS 40.0%
TGTGGCACTACAAAAATGCA+AGG + chr1.1:51016938-51016957 MS.gene89532:CDS 40.0%
TTAGACGGCATCTTTGTAGT+GGG - chr1.1:51018015-51018034 None:intergenic 40.0%
TTCACAATAAACAAGGTGGG+TGG - chr1.1:51014907-51014926 None:intergenic 40.0%
TTCAGATTGCTCAATGACAG+AGG + chr1.1:51017175-51017194 MS.gene89532:CDS 40.0%
TTCTAGGCATATGTCCTGAT+GGG + chr1.1:51016421-51016440 MS.gene89532:intron 40.0%
TTGTCACAAATGTTCATCCC+AGG + chr1.1:51017240-51017259 MS.gene89532:CDS 40.0%
TTTCTGCAAGGATGGTTAGT+CGG + chr1.1:51017623-51017642 MS.gene89532:CDS 40.0%
! AAATTTGATTTCCAGGGTCG+AGG + chr1.1:51015272-51015291 MS.gene89532:intron 40.0%
! AACGACAGATACTTGCTAGT+GGG + chr1.1:51016538-51016557 MS.gene89532:CDS 40.0%
! AGCATGCAGGTTGAACAATA+CGG + chr1.1:51017341-51017360 MS.gene89532:CDS 40.0%
! ATACCTGGTGTTGGAATTCT+GGG - chr1.1:51014145-51014164 None:intergenic 40.0%
! ATGCTTTCATCCTTTTCCTG+GGG + chr1.1:51020605-51020624 MS.gene89532:CDS 40.0%
! ATTCAAGGAGACATGGGTTA+TGG - chr1.1:51015722-51015741 None:intergenic 40.0%
! CATGATCAGCGTTTTCATGT+TGG - chr1.1:51017520-51017539 None:intergenic 40.0%
! CATGCTTTCATCCTTTTCCT+GGG + chr1.1:51020604-51020623 MS.gene89532:CDS 40.0%
! CTCTAGGAAAGTCAATTACG+AGG + chr1.1:51015237-51015256 MS.gene89532:intron 40.0%
! GGAATTTTCCATGGAATCAG+CGG + chr1.1:51014083-51014102 MS.gene89532:CDS 40.0%
! GTCACCAGATTCTAATGGAT+GGG + chr1.1:51017592-51017611 MS.gene89532:CDS 40.0%
! TGTTTAGTTGTTGTGTTGGC+TGG + chr1.1:51020382-51020401 MS.gene89532:intron 40.0%
! TTCAAGGAGACATGGGTTAT+GGG - chr1.1:51015721-51015740 None:intergenic 40.0%
! TTGAACTTAGCTTGAGGGTT+AGG + chr1.1:51014548-51014567 MS.gene89532:intron 40.0%
!! AATCTGTTGAGGAAGCATTG+AGG - chr1.1:51017669-51017688 None:intergenic 40.0%
!! AGCAGGTAATTTTCAAGGGA+CGG - chr1.1:51018787-51018806 None:intergenic 40.0%
!! ATCTGTTGAGGAAGCATTGA+GGG - chr1.1:51017668-51017687 None:intergenic 40.0%
!! GTTTTAGCAGGGACTAAAAC+TGG - chr1.1:51018878-51018897 None:intergenic 40.0%
!! TTGGTGGTGAACAGATTAGA+TGG - chr1.1:51017707-51017726 None:intergenic 40.0%
!!! GTTTTCATGTTGGCTTGCTT+CGG - chr1.1:51017510-51017529 None:intergenic 40.0%
AAAAGATATGGTGCCCCATG+CGG - chr1.1:51017027-51017046 None:intergenic 45.0%
AACTGACCTGGATTGAAGTC+AGG - chr1.1:51018670-51018689 None:intergenic 45.0%
ACAGTGGTAGATGCAAAGTG+TGG + chr1.1:51015116-51015135 MS.gene89532:CDS 45.0%
ACTATGGGCACAAAACCACT+TGG - chr1.1:51016383-51016402 None:intergenic 45.0%
ACTCCAATCATGTTCTCCTC+AGG - chr1.1:51020799-51020818 None:intergenic 45.0%
AGATCCGATTCAAGGAGACA+TGG - chr1.1:51015729-51015748 None:intergenic 45.0%
AGCTCCCATCCATTAGAATC+TGG - chr1.1:51017599-51017618 None:intergenic 45.0%
AGGTATTAGTTGGCCACAGA+AGG + chr1.1:51015543-51015562 MS.gene89532:CDS 45.0%
ATAACCTCACAATGGGTGGT+AGG + chr1.1:51017462-51017481 MS.gene89532:CDS 45.0%
ATGACAGAGGCAACATCTCA+TGG + chr1.1:51017188-51017207 MS.gene89532:CDS 45.0%
CAGCATGCTAGTAACGATGT+TGG + chr1.1:51017311-51017330 MS.gene89532:CDS 45.0%
CATGCTGGAGCAGATATGAT+AGG - chr1.1:51018083-51018102 None:intergenic 45.0%
CCAGAAGACGAGCCAATTTA+TGG + chr1.1:51016001-51016020 MS.gene89532:intron 45.0%
CGTCACCAGATTCTAATGGA+TGG + chr1.1:51017591-51017610 MS.gene89532:CDS 45.0%
CTCCAATCATGTTCTCCTCA+GGG - chr1.1:51020798-51020817 None:intergenic 45.0%
CTGCAGCATTTAGTCCAGAT+GGG + chr1.1:51015361-51015380 MS.gene89532:CDS 45.0%
CTTCCTCCAGGGAATATATC+CGG - chr1.1:51018489-51018508 None:intergenic 45.0%
GATCCGATTCAAGGAGACAT+GGG - chr1.1:51015728-51015747 None:intergenic 45.0%
GCAAGTATCTGTCGTTGCAA+TGG - chr1.1:51016534-51016553 None:intergenic 45.0%
GCGGCTAAAAATCTACCACA+TGG - chr1.1:51018337-51018356 None:intergenic 45.0%
GGAAAGCGAGAGATGCAATA+GGG - chr1.1:51016742-51016761 None:intergenic 45.0%
GGTTGTAGGAAGGAAAGCTT+AGG + chr1.1:51020719-51020738 MS.gene89532:intron 45.0%
GTATCTGTCGTTGCAATGGA+TGG - chr1.1:51016530-51016549 None:intergenic 45.0%
GTGTTAATCGGCTACAGGTT+AGG + chr1.1:51016502-51016521 MS.gene89532:intron 45.0%
GTTAGACGGCATCTTTGTAG+TGG - chr1.1:51018016-51018035 None:intergenic 45.0%
GTTCCGTCACCAGATTCTAA+TGG + chr1.1:51017587-51017606 MS.gene89532:CDS 45.0%
TAACCTCACAATGGGTGGTA+GGG + chr1.1:51017463-51017482 MS.gene89532:CDS 45.0%
TAATTCTGTAGCAGCTGCAG+TGG - chr1.1:51017939-51017958 None:intergenic 45.0%
TACTGTGTCAGTTGTACGTG+TGG + chr1.1:51016920-51016939 MS.gene89532:intron 45.0%
TAGACGGCATCTTTGTAGTG+GGG - chr1.1:51018014-51018033 None:intergenic 45.0%
TCAGTTACAGGTAAACGGGA+TGG - chr1.1:51017818-51017837 None:intergenic 45.0%
TCATTGCCTGACTTCAATCC+AGG + chr1.1:51018661-51018680 MS.gene89532:CDS 45.0%
TGAGCACGAGAAATGGAAGT+TGG + chr1.1:51019242-51019261 MS.gene89532:intron 45.0%
TGGAAAGCGAGAGATGCAAT+AGG - chr1.1:51016743-51016762 None:intergenic 45.0%
TGGCTATCAAACCCATCATG+CGG - chr1.1:51017872-51017891 None:intergenic 45.0%
TTAGTCGGTCAAAGCCAAGT+TGG + chr1.1:51017638-51017657 MS.gene89532:CDS 45.0%
TTCCCTGAGGAGAACATGAT+TGG + chr1.1:51020793-51020812 MS.gene89532:CDS 45.0%
TTTGTGACAAAAACAGCCGG+TGG - chr1.1:51017230-51017249 None:intergenic 45.0%
! AATGTGAATGGCACTGGATC+TGG + chr1.1:51020766-51020785 MS.gene89532:CDS 45.0%
! AGGCAATGAGCAGCTCTAAT+TGG - chr1.1:51018650-51018669 None:intergenic 45.0%
! ATACCCACTAGCTCTCAAAC+CGG + chr1.1:51017386-51017405 MS.gene89532:CDS 45.0%
! CAACGACAGATACTTGCTAG+TGG + chr1.1:51016537-51016556 MS.gene89532:CDS 45.0%
! CATACCTGGTGTTGGAATTC+TGG - chr1.1:51014146-51014165 None:intergenic 45.0%
! GAGGCAAGAATTTTCCCATC+TGG - chr1.1:51015378-51015397 None:intergenic 45.0%
! GATACTTGCTAGTGGGAGTT+TGG + chr1.1:51016545-51016564 MS.gene89532:CDS 45.0%
! GATTGATAACCCTTTGCTCG+TGG + chr1.1:51020695-51020714 MS.gene89532:intron 45.0%
! GCATGCTTTCATCCTTTTCC+TGG + chr1.1:51020603-51020622 MS.gene89532:CDS 45.0%
! GTTCTAGGCATATGTCCTGA+TGG + chr1.1:51016420-51016439 MS.gene89532:intron 45.0%
! TAGGATTTGAAGCACCCATC+AGG - chr1.1:51016438-51016457 None:intergenic 45.0%
! TAGGGAATAAAAGTGCGTGC+AGG + chr1.1:51019179-51019198 MS.gene89532:intron 45.0%
! TGCTTTCATCCTTTTCCTGG+GGG + chr1.1:51020606-51020625 MS.gene89532:CDS 45.0%
! TGGACTAGAGTACATCTGAG+AGG - chr1.1:51018560-51018579 None:intergenic 45.0%
! TTGAGAGCTAGTGGGTATCT+CGG - chr1.1:51017384-51017403 None:intergenic 45.0%
! TTGGAATTCTGGGAGGATGA+GGG - chr1.1:51014135-51014154 None:intergenic 45.0%
!! AACACCTCCTGAAAGTGTTG+TGG + chr1.1:51015694-51015713 MS.gene89532:intron 45.0%
!! ACACCTCCTGAAAGTGTTGT+GGG + chr1.1:51015695-51015714 MS.gene89532:intron 45.0%
!! AGCATGTACGAAAGTGTCAC+TGG + chr1.1:51015051-51015070 MS.gene89532:CDS 45.0%
!! ATGAAGTTCCGCTGATTCCA+TGG - chr1.1:51014094-51014113 None:intergenic 45.0%
!! CATGTACGAAAGTGTCACTG+GGG + chr1.1:51015053-51015072 MS.gene89532:CDS 45.0%
!! CCATAAATTGGCTCGTCTTC+TGG - chr1.1:51016004-51016023 None:intergenic 45.0%
!! CTGTTCTCGTTCTAGAACAG+TGG + chr1.1:51015100-51015119 MS.gene89532:CDS 45.0%
!! CTTGATAGTGTGACAGTCAC+AGG + chr1.1:51014679-51014698 MS.gene89532:intron 45.0%
!! GCATGTACGAAAGTGTCACT+GGG + chr1.1:51015052-51015071 MS.gene89532:CDS 45.0%
!! TGTTGGTTTGAGTAGCATGC+AGG + chr1.1:51017328-51017347 MS.gene89532:CDS 45.0%
!! AAAATAATTCAAAAATTTAA+AGG - chr1.1:51018925-51018944 None:intergenic 5.0%
!! ATAAAAAAATAAAAAAACAA+AGG - chr1.1:51016874-51016893 None:intergenic 5.0%
AAAGATATGGTGCCCCATGC+GGG - chr1.1:51017026-51017045 None:intergenic 50.0%
AAGCCAAAGCTTACCACCCA+AGG - chr1.1:51015572-51015591 None:intergenic 50.0%
AGAGCTATGACGTCGACCAT+AGG - chr1.1:51019901-51019920 None:intergenic 50.0%
AGGGCTTGTCTATGGAACCA+AGG + chr1.1:51020629-51020648 MS.gene89532:CDS 50.0%
AGGGTGCATACATGCAACAC+AGG - chr1.1:51018359-51018378 None:intergenic 50.0%
ATGCCATTGGGCATTCCTGA+AGG - chr1.1:51017749-51017768 None:intergenic 50.0%
CAAAGTGTGGTCTCCTCTCA+TGG + chr1.1:51015129-51015148 MS.gene89532:CDS 50.0%
CACAGCTAGCTCAACATTGG+TGG - chr1.1:51017723-51017742 None:intergenic 50.0%
CTACAACCACCACGAGCAAA+GGG - chr1.1:51020707-51020726 None:intergenic 50.0%
CTCAGGTGAGTGAACTGACT+TGG + chr1.1:51017052-51017071 MS.gene89532:intron 50.0%
CTCTCGCTTTCCATGCCAAT+GGG + chr1.1:51016750-51016769 MS.gene89532:CDS 50.0%
CTGCAGCAATAGTAGACCGT+GGG - chr1.1:51015347-51015366 None:intergenic 50.0%
GACATGTTGATCTGCGTCCT+GGG - chr1.1:51017260-51017279 None:intergenic 50.0%
GAGCATATTCTGCTCGCCTA+TGG + chr1.1:51019882-51019901 MS.gene89532:CDS 50.0%
GCAGGTATGCTGATGCCATT+GGG - chr1.1:51017761-51017780 None:intergenic 50.0%
GCATTGAGGGAACACCAACT+TGG - chr1.1:51017655-51017674 None:intergenic 50.0%
GCTGAGATTGGATGTCGAGT+TGG - chr1.1:51018445-51018464 None:intergenic 50.0%
GCTGCAGCATTTAGTCCAGA+TGG + chr1.1:51015360-51015379 MS.gene89532:CDS 50.0%
GGGCGCAGGAAAATACTGTA+AGG - chr1.1:51018857-51018876 None:intergenic 50.0%
GTCGGAACTTGCCAAATCAG+TGG + chr1.1:51017913-51017932 MS.gene89532:CDS 50.0%
GTGCATACATGCAACACAGG+CGG - chr1.1:51018356-51018375 None:intergenic 50.0%
TATGGGCCCACAACACTTTC+AGG - chr1.1:51015704-51015723 None:intergenic 50.0%
TCTCGCTTTCCATGCCAATG+GGG + chr1.1:51016751-51016770 MS.gene89532:CDS 50.0%
TCTCTCGCTTTCCATGCCAA+TGG + chr1.1:51016749-51016768 MS.gene89532:CDS 50.0%
TGACATGTTGATCTGCGTCC+TGG - chr1.1:51017261-51017280 None:intergenic 50.0%
TGAGCTCCGGATATATTCCC+TGG + chr1.1:51018480-51018499 MS.gene89532:CDS 50.0%
TGATAACCCTTTGCTCGTGG+TGG + chr1.1:51020698-51020717 MS.gene89532:intron 50.0%
TGCAGAGGATGAGGTCAATG+TGG + chr1.1:51020581-51020600 MS.gene89532:CDS 50.0%
TGCAGCAATAGTAGACCGTG+GGG - chr1.1:51015346-51015365 None:intergenic 50.0%
TGCAGGTATGCTGATGCCAT+TGG - chr1.1:51017762-51017781 None:intergenic 50.0%
TGCTGTTGCATCAGGTCACA+AGG + chr1.1:51016781-51016800 MS.gene89532:CDS 50.0%
TGGATCTGGTTACTTCCCTG+AGG + chr1.1:51020780-51020799 MS.gene89532:CDS 50.0%
TGGCACAGCTAGCTCAACAT+TGG - chr1.1:51017726-51017745 None:intergenic 50.0%
! AGCTGCCTTTTCTGCAAGGA+TGG + chr1.1:51017615-51017634 MS.gene89532:CDS 50.0%
! CTGTGCATTTTCACCCGCAT+GGG + chr1.1:51017010-51017029 MS.gene89532:CDS 50.0%
! GAGGGTTGATCATGACACAG+AGG - chr1.1:51014117-51014136 None:intergenic 50.0%
! GCTTTCTAGTGCAGAGGATG+AGG + chr1.1:51020572-51020591 MS.gene89532:CDS 50.0%
! GTTGGAATTCTGGGAGGATG+AGG - chr1.1:51014136-51014155 None:intergenic 50.0%
! TGTGCATTTTCACCCGCATG+GGG + chr1.1:51017011-51017030 MS.gene89532:CDS 50.0%
! TGTGCTTTTGGCATGTGCAG+TGG + chr1.1:51015473-51015492 MS.gene89532:intron 50.0%
! TTCATCCTTTTCCTGGGGGA+GGG + chr1.1:51020610-51020629 MS.gene89532:CDS 50.0%
! TTTCATCCTTTTCCTGGGGG+AGG + chr1.1:51020609-51020628 MS.gene89532:CDS 50.0%
!! ACTTCAGAAGGTACCTGCAG+AGG - chr1.1:51018054-51018073 None:intergenic 50.0%
!! CTGATTTGGCAAGTTCCGAC+TGG - chr1.1:51017913-51017932 None:intergenic 50.0%
!! GGATGTCGAGTTGGTGATGT+TGG - chr1.1:51018436-51018455 None:intergenic 50.0%
!! GGTGCCCATTTTTCACCATG+TGG + chr1.1:51018319-51018338 MS.gene89532:CDS 50.0%
!! GTTGGTGATGTTGGAAGTCC+AGG - chr1.1:51018427-51018446 None:intergenic 50.0%
!! TCTGGTGACGGAACAATCTG+AGG - chr1.1:51017581-51017600 None:intergenic 50.0%
ACCGTGGGGCAGGCAATAAA+GGG - chr1.1:51015332-51015351 None:intergenic 55.0%
ACGCCTTGGGTGGTAAGCTT+TGG + chr1.1:51015566-51015585 MS.gene89532:intron 55.0%
ACTCTTGTACACCAGGAGCC+TGG + chr1.1:51018406-51018425 MS.gene89532:CDS 55.0%
AGGAGGGAGGGACAGAGATA+TGG - chr1.1:51019572-51019591 None:intergenic 55.0%
AGTCGTACGTTGCTTCCTCC+AGG - chr1.1:51018501-51018520 None:intergenic 55.0%
ATGTTGGAAGTCCAGGCTCC+TGG - chr1.1:51018420-51018439 None:intergenic 55.0%
CCACCTTCAGGAATGCCCAA+TGG + chr1.1:51017743-51017762 MS.gene89532:CDS 55.0%
CCATTGGGCATTCCTGAAGG+TGG - chr1.1:51017746-51017765 None:intergenic 55.0%
CCTACAACCACCACGAGCAA+AGG - chr1.1:51020708-51020727 None:intergenic 55.0%
CCTCCCAGAATTCCAACACC+AGG + chr1.1:51014139-51014158 MS.gene89532:CDS 55.0%
CCTTTGCTCGTGGTGGTTGT+AGG + chr1.1:51020705-51020724 MS.gene89532:intron 55.0%
CGCGTTGAACTCTCTGAGCT+TGG + chr1.1:51017548-51017567 MS.gene89532:CDS 55.0%
GCTCCGGATATATTCCCTGG+AGG + chr1.1:51018483-51018502 MS.gene89532:CDS 55.0%
GCTGCAGCAATAGTAGACCG+TGG - chr1.1:51015348-51015367 None:intergenic 55.0%
GGAGGGAGGGACAGAGATAT+GGG - chr1.1:51019571-51019590 None:intergenic 55.0%
GGGATGCTAGCTCATCAGAG+TGG + chr1.1:51016586-51016605 MS.gene89532:CDS 55.0%
GTCGTACGTTGCTTCCTCCA+GGG - chr1.1:51018500-51018519 None:intergenic 55.0%
GTGACAAAAACAGCCGGTGG+AGG - chr1.1:51017227-51017246 None:intergenic 55.0%
TACCACATGTCGTCCTCTGC+AGG + chr1.1:51018038-51018057 MS.gene89532:CDS 55.0%
TACCTGCAGAGGACGACATG+TGG - chr1.1:51018043-51018062 None:intergenic 55.0%
TGCTCGTGGTGGTTGTAGGA+AGG + chr1.1:51020709-51020728 MS.gene89532:intron 55.0%
! AGCTGCAGTGGCCACTGATT+TGG - chr1.1:51017927-51017946 None:intergenic 55.0%
! CAGGGTGCTTTCTAGTGCAG+AGG + chr1.1:51020566-51020585 MS.gene89532:CDS 55.0%
! CATCTTTGTAGTGGGGCGCA+GGG - chr1.1:51018007-51018026 None:intergenic 55.0%
! CCTGGTGTTGGAATTCTGGG+AGG - chr1.1:51014142-51014161 None:intergenic 55.0%
! GCTCCGGTTTGAGAGCTAGT+GGG - chr1.1:51017392-51017411 None:intergenic 55.0%
! GCTGTGCATTTTCACCCGCA+TGG + chr1.1:51017009-51017028 MS.gene89532:CDS 55.0%
! TGAAGACAAGGCGCTCGCTA+CGG + chr1.1:51016986-51017005 MS.gene89532:CDS 55.0%
! TGCTCCGGTTTGAGAGCTAG+TGG - chr1.1:51017393-51017412 None:intergenic 55.0%
! TGGGAGCTGCCTTTTCTGCA+AGG + chr1.1:51017611-51017630 MS.gene89532:CDS 55.0%
!! TCATGTTGGCTTGCTTCGGC+TGG - chr1.1:51017506-51017525 None:intergenic 55.0%
ACAAGCCCTCCCCCAGGAAA+AGG - chr1.1:51020618-51020637 None:intergenic 60.0%
CAATGACTCAGCCTCGACCC+TGG - chr1.1:51015286-51015305 None:intergenic 60.0%
CAGGGACTAAAACTGGGCGC+AGG - chr1.1:51018871-51018890 None:intergenic 60.0%
CCTCACAATGGGTGGTAGGG+AGG + chr1.1:51017466-51017485 MS.gene89532:CDS 60.0%
CCTCCCTACCACCCATTGTG+AGG - chr1.1:51017469-51017488 None:intergenic 60.0%
GACCGTGGGGCAGGCAATAA+AGG - chr1.1:51015333-51015352 None:intergenic 60.0%
GAGCTAGCTGTGCCACCTTC+AGG + chr1.1:51017731-51017750 MS.gene89532:CDS 60.0%
GCAATAGTAGACCGTGGGGC+AGG - chr1.1:51015342-51015361 None:intergenic 60.0%
GCCCTTTATTGCCTGCCCCA+CGG + chr1.1:51015328-51015347 MS.gene89532:CDS 60.0%
GGGCCCACAACACTTTCAGG+AGG - chr1.1:51015701-51015720 None:intergenic 60.0%
TGGCCACAGAAGGACGCCTT+GGG + chr1.1:51015553-51015572 MS.gene89532:CDS 60.0%
TTGGCCACAGAAGGACGCCT+TGG + chr1.1:51015552-51015571 MS.gene89532:CDS 60.0%
! GAAGACAAGGCGCTCGCTAC+GGG + chr1.1:51016987-51017006 MS.gene89532:CDS 60.0%
! GCATCTTTGTAGTGGGGCGC+AGG - chr1.1:51018008-51018027 None:intergenic 60.0%
CCACAGAAGGACGCCTTGGG+TGG + chr1.1:51015556-51015575 MS.gene89532:CDS 65.0%
CCATAGACAAGCCCTCCCCC+AGG - chr1.1:51020624-51020643 None:intergenic 65.0%
CCTGGGGGAGGGCTTGTCTA+TGG + chr1.1:51020621-51020640 MS.gene89532:CDS 65.0%
! CCACCCAAGGCGTCCTTCTG+TGG - chr1.1:51015559-51015578 None:intergenic 65.0%
! GCGCGCGTGCGCAGGAGGGA+GGG - chr1.1:51019584-51019603 None:intergenic 80.0%
! GTGCGCGCGCGTGCGCAGGA+GGG - chr1.1:51019588-51019607 None:intergenic 80.0%
! GTGTGTGCGCGCGCGTGCGC+AGG - chr1.1:51019592-51019611 None:intergenic 80.0%
! TGTGCGCGCGCGTGCGCAGG+AGG - chr1.1:51019589-51019608 None:intergenic 80.0%
! CGCGCGCGTGCGCAGGAGGG+AGG - chr1.1:51019585-51019604 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 51014081 51020828 51014081 ID=MS.gene89532
chr1.1 mRNA 51014081 51020828 51014081 ID=MS.gene89532.t1;Parent=MS.gene89532
chr1.1 exon 51014081 51014160 51014081 ID=MS.gene89532.t1.exon1;Parent=MS.gene89532.t1
chr1.1 CDS 51014081 51014160 51014081 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51014998 51015150 51014998 ID=MS.gene89532.t1.exon2;Parent=MS.gene89532.t1
chr1.1 CDS 51014998 51015150 51014998 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51015287 51015403 51015287 ID=MS.gene89532.t1.exon3;Parent=MS.gene89532.t1
chr1.1 CDS 51015287 51015403 51015287 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51015493 51015577 51015493 ID=MS.gene89532.t1.exon4;Parent=MS.gene89532.t1
chr1.1 CDS 51015493 51015577 51015493 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51016519 51016627 51016519 ID=MS.gene89532.t1.exon5;Parent=MS.gene89532.t1
chr1.1 CDS 51016519 51016627 51016519 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51016735 51016802 51016735 ID=MS.gene89532.t1.exon6;Parent=MS.gene89532.t1
chr1.1 CDS 51016735 51016802 51016735 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51016931 51017056 51016931 ID=MS.gene89532.t1.exon7;Parent=MS.gene89532.t1
chr1.1 CDS 51016931 51017056 51016931 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51017158 51018059 51017158 ID=MS.gene89532.t1.exon8;Parent=MS.gene89532.t1
chr1.1 CDS 51017158 51018059 51017158 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51018312 51018512 51018312 ID=MS.gene89532.t1.exon9;Parent=MS.gene89532.t1
chr1.1 CDS 51018312 51018512 51018312 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51018622 51018682 51018622 ID=MS.gene89532.t1.exon10;Parent=MS.gene89532.t1
chr1.1 CDS 51018622 51018682 51018622 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51019867 51019980 51019867 ID=MS.gene89532.t1.exon11;Parent=MS.gene89532.t1
chr1.1 CDS 51019867 51019980 51019867 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51020537 51020650 51020537 ID=MS.gene89532.t1.exon12;Parent=MS.gene89532.t1
chr1.1 CDS 51020537 51020650 51020537 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
chr1.1 exon 51020727 51020828 51020727 ID=MS.gene89532.t1.exon13;Parent=MS.gene89532.t1
chr1.1 CDS 51020727 51020828 51020727 ID=cds.MS.gene89532.t1;Parent=MS.gene89532.t1
Gene Sequence

>MS.gene89532

ATGGAATTTTCCATGGAATCAGCGGAACTTCATCCTCTGTGTCATGATCAACCCTCATCCTCCCAGAATTCCAACACCAGGTATGAATTTTCCATATCTTCTTTGTTAATATTCAATTTGATTCAGTTTTTGATACATATGATATTCGATTCTGGATTGTAGTAGTAATTTGATTGTGAATTTTGATGTGTTATTATGATTTTTATGACCTAAGTATTTTTTTTTTAAGTTGTTATATACATTTTGTGATTATATTAATCTTGTTTTACTATTGTTGCTGTTAAGTTAGCTGAGATTTTTAGGTTGAAGCTTGATTAAACCCTAAATAATTATGTGGTTATTAATTCTCAGGGTTGGTTTTATATTATATGAATCTATGTTGTTAAATTTTGAAGTTGAATTGGACCTAAGTATTTTGAAGTAATTTTAATTCACTGTATTGATTCAACTAGGGCTTACTCAGTTATTTGAACTTAGCTTGAGGGTTAGGTCAAACTAATTTGACATCTGATTTGCATCATTTTTTACAAGTTAATTGGGATGATAACAAAAAAAATTGGCCCGGATGAAAAATACACGAATTTAATGACCATAAATGCTTGATAGTGTGACAGTCACAGGAAATTTATACACATGTTGTTGAATGATTGTTGAGGATTAAACTCGTTGACAACTTAGGGTAAATTTTTTTTGAAATTTATGCTCATGCTGCTTTGTTTGTTAGATATCAGACCATATTTATTCCCACCATACATATGCTTAGCATGCTTAATTGAACAGCCAATGTCGAATTCATTATTGTTAGCTGTGGCATTTAACAGATCCACCCACCTTGTTTATTGTGAATTTGAAGTATGTATTTTTTTGTTACAATGTTCCTCACATGATTTTTTATTTTTATTTTTAAATTTGGGCAGTGGTAGAAATGTCTTCAGTTTGCTAGCTCAAAGAGAGATTTCACCTAGAAACAAGCATGTACGAAAGTGTCACTGGGGAGAATCTTCTGAATCAAAATCTGGCTGTTCTCGTTCTAGAACAGTGGTAGATGCAAAGTGTGGTCTCCTCTCATGGTACTTACACAACTTTAGTCCGTTCAGTGTATAATTTATACCGAATAAAAACAAAGCCTTTTGTCGACTGTGAATTTGTTTCCTTTCTCTAGGAAAGTCAATTACGAGGACTGACATTTTTAAATTTGATTTCCAGGGTCGAGGCTGAGTCATTGCAGCATTTGTCAGCCAAGTATTGCCCTTTATTGCCTGCCCCACGGTCTACTATTGCTGCAGCATTTAGTCCAGATGGGAAAATTCTTGCCTCCACACAGTAAGTTGCAATTGGATTTTCTTCTCTTGTGCCAATTTGAATCACAGACTCTTTATGATTGAATTTTTGTGTGCTTTTGGCATGTGCAGTGGTGACCACACAGTTAAGATCATTGATTGTGAAACTGGAAATTGCTTGAAGGTATTAGTTGGCCACAGAAGGACGCCTTGGGTGGTAAGCTTTGGCTTAATTTCTTGTCTCTACCTTTTTCCTTTTCATTTCTTTTTGTCTGGTTATAACTTATAGACAATGTCATGAACCAAGTGAATAATAGTTTTATATTATATCTCAACACCTCCTGAAAGTGTTGTGGGCCCATAACCCATGTCTCCTTGAATCGGATCTAAGATTTGATACCGACTTGATCAATTAGTTTATTGAATACTACCTGTTGTTGTTGATTAATGATTATAATTGTACGATAGAGCATGTATTATATATGACTAATTACTACTTTCCTATAGTAGAGCTACACTATGAGTTACATACCCGTCCTAATAAAAGGAAGTTAAGTAAGAAATCTGTACTGGGAAATGAAATAGAAATATTAACTCTTAACAGAATTAATATATTTCCATTAAGTTTGATGAGATATATCCAGAAGACGAGCCAATTTATGGAGTTGAGTTTATAGATTTTTCATTTCTATCAAAGCACTAACCAGCTACTCAATTTTGGTTGTTAGTGTGTACTTCAAGAATTCAATAATCTAGATTTTATTTTGTTTAAGAAGATATGTCATGTAAAATTAATTTCATGTTTCTTTGCCGTTGCATTCAATTTTATACCATGTTATTTCCCATGGCTTGTAAAGTGAGTTTGATTTTGGCACTTTTCAATTCAAGTGTGCGACAAATATATGCTGTTGAATATTTTTCTTTGATTCTTTTGTACTTTTTGGGAAATTGCATGAGTACTTCTATGAAAGAGGCAATGCGAATTATATAATCTTTTTGATTCCCTGTAATCTCTAATGCCAAGTGGTTTTGTGCCCATAGTTACAGAATATGAGAACCGTTCTAGGCATATGTCCTGATGGGTGCTTCAAATCCTAGCACAGTCTTAGTGTTTGTTTTTATAGTCTTCATTTGGAATAATGTGTTAATCGGCTACAGGTTAGGTTCCATCCATTGCAACGACAGATACTTGCTAGTGGGAGTTTGGACCAAGAAGTTCGTTTATGGGATGCTAGCTCATCAGAGTGGATTTTATCTCACTATTTTTGTAACTACACTACCCATCTCCCCTTTTCTATTGTTAATCACATTTGAAGCTATTACTGAATTTGTTGTTGGTTTCTCTTTGATGAACTTAATGGGTTATTTTCTCAGATCGCCCTATTGCATCTCTCGCTTTCCATGCCAATGGGGAAATAATTGCTGTTGCATCAGGTCACAAGGTAACAATGTAGTGTAGTGTTTTTACCGAGAACCTGCCATGTGTTATAACCTTTGGTGACATGTTCTACCTTTGTTTTTTTATTTTTTTATTTTGTTTAATTGTGATTTGGATGGAATACTGTGTCAGTTGTACGTGTGGCACTACAAAAATGCAAGGGAATTATCTTCACCAGTATTTGTGTTGAAGACAAGGCGCTCGCTACGGGCTGTGCATTTTCACCCGCATGGGGCACCATATCTTTTAACTGCTCAGGTGAGTGAACTGACTTGGATTAATTAACTGGCTTCATGTGCTATAAAAACTATTACTTTTTGGATTTTCTTTTTTGTCACCATATTTGGATTGATGTGCAGGTCAATGATCTCAACTCTTCAGATTGCTCAATGACAGAGGCAACATCTCATGGTCATTTAGAATATCCTCCACCGGCTGTTTTTGTCACAAATGTTCATCCCAGGACGCAGATCAACATGTCAAGTGAACCACCAGTGTCAAGAGTTGAATTGCAGCATGCTAGTAACGATGTTGGTTTGAGTAGCATGCAGGTTGAACAATACGGTACTCGATTGTCAAACTCCGAGATACCCACTAGCTCTCAAACCGGAGCAGAATATAATGGCCATACTACTTTGCCTAATCAAATGAGAATTGGCATCAATAACCTCACAATGGGTGGTAGGGAGGCTTATGAAACAGAACCAGCCGAAGCAAGCCAACATGAAAACGCTGATCATGTTGTAAAACGCGTTGAACTCTCTGAGCTTGGTCAATTTCCTCAGATTGTTCCGTCACCAGATTCTAATGGATGGGAGCTGCCTTTTCTGCAAGGATGGTTAGTCGGTCAAAGCCAAGTTGGTGTTCCCTCAATGCTTCCTCAACAGATTGGTTCTTTCACTATGCCATCTAATCTGTTCACCACCAATGTTGAGCTAGCTGTGCCACCTTCAGGAATGCCCAATGGCATCAGCATACCTGCAGTTTTACAATCAGGTTTACAGAATCAATTTTCACCATCCCGTTTACCTGTAACTGATTTTGGCAATCTCGTTCCTTCTATTAATTTGCCGCATGATGGGTTTGATAGCCAAACCATTATAAATCGAATCCAGTCGGAACTTGCCAAATCAGTGGCCACTGCAGCTGCTACAGAATTACCTTGCACTGTTAACTTAAAAGTATGGTCATATGACTTAAAAAATCCCTGCGCCCCACTACAAAGATGCCGTCTAACTATACCACATGTCGTCCTCTGCAGGTACCTTCTGAAGTTATGAACCTATCATATCTGCTCCAGCATGTGATTGATATAGTGTTATTGTTAATTTTCTTTGCTTTTGCATGCATAATGTGAATTGAGTGCTTTTCTTTTTTATTGTGAATGAACATAGACTGATTACTTGATGGAAATTGATTAATATTATAAAGTTGTTATAGAAATGTTTGGAGTGACTTTGTGGAACTATACTCGATTGTATTTAGATTTTTTAATTTGCAACTGTGTTTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGATTTTTAGCCGCCTGTGTTGCATGTATGCACCCTCATATGGAAGCTGATCCAGGATTACAAACTCTTGTACACCAGGAGCCTGGACTTCCAACATCACCAACTCGACATCCAATCTCAGCACATCAAGTAATGTATGAGCTCCGGATATATTCCCTGGAGGAAGCAACGTACGACTCTTCCTTTCAACAATTGTTGCTAGTATTTAATTATTCCTCTCAGATGTACTCTAGTCCAAGCATATCATTAAAATTTATGTATATACATTTCTTTTAACAGATTTGGATCGGTGCTTGTATCACGACCAATTAGAGCTGCTCATTGCCTGACTTCAATCCAGGTCAGTTAATTTACTTTATCACCTGGTTGATGTAAATTATGCAAACTTAAAATAATTACATTTTGAATACATTATTCTTTTTTTGGGTTAAATATGTTTTTCCGTCCCTTGAAAATTACCTGCTTTCATTTTTAGTCCTCAAAATAAAATAAAAAAGAGGCACTTTGTCGTCCTTACAGTATTTTCCTGCGCCCAGTTTTAGTCCCTGCTAAAACCAATTTGGATTAATTATCCTTAAACCTTTAAATTTTTGAATTATTTTTTGTAGACATGTTTAGAACATTATAAGAAGTTCTTTTACCACAATTTTGAATTTTTTAGCATAAGATGAATTAAATATGAATGTTTTAAACGCCAAAAGTTCAATATGAAAGTAATGAAAATCTGGACCTAGTAATCAATTTTTGAGCTCATTCTTTGCAAAGAAACTTTTATAATGTTCTAAACATGTCTGCAAAAAAAAAAAATCATTCAAAAATACATGTTAACTTAACAGTAGGGAATAAAAGTGCGTGCAGGAAAATTTTATAGGGACGACGAAGTGTGCCACCTTTTTTTATGAGCACGAGAAATGGAAGTTGGTGATTTTGTAGGGATGAAAAAAATATTTAACCCTTGTTTTTTTGACACAAAAATGTATTGTTGTTGAAAGCTATTTAATTTATATTTTGTGAATAGCAAGTTATTACTGTATTGTTTAACATTGTAGGTGCTATGCAGTTTGTACTTTTTTTTACTCTTTTTTCATCACAATATTACAACAGTTTGTTTCGTCCTTTTTAATTTATGTTCAGCATATGCCCTCAATCCTCATAATCATATTTCTATTTTTCGTTTACATGTTTGCATCTTTTTTCAATATTATCAATACATGATGAATAATTTCCCATATCTCTGTCCCTCCCTCCTGCGCACGCGCGCGCACACACACACACACACACACACACACACATATATATTCCTTTTGTCCTTGTTTGTATTACACAAACAAAAGGTAAATCCATTGGCACTATAATTGTTATCACACTTATCCTAATAGTTTACTTACCTATTTTTGTCTTGAAGTTGCATGGGTCATTTAAATATTAATAGCTACTACAGTCACATTTCACTTGATTAGCAAATAATCAAAAAATTACTTTTCTTGGTGGATTGAATTTGTGCAACTGTTGTTTTAAATGTAGTTCTCGCCTACATCTGAGCATATTCTGCTCGCCTATGGTCGACGTCATAGCTCTCTTCTGAAAAGCATTGTCATTGATGGAGAAAAAACATCATCAATATATACAGTCTTGGAGGTAAAAATGGTTTTCCTTTTCTCAATCTAAAATTATCTTATCATGTGAACTGTACTTCATTGTGATATCAATAATAATAGAATCCCTCATGTCTCGAATAAAAGAAAAAAATATTCATATTTTTTTAATGTTGTCATTTCTAAATACCTCTAATTTAATGGAAGTATTATTTTTCAGAGATTCTTATTTTCATGAAACAAGTTTCCATGAACGACATTTTTAGAATGCACTTATTTTTTTTTATGGGATCAAGAAAATTAATCTCACTTAAACAAATTTCTTATCAAGTGTGAAGTTATTTAGTTTTGCTTACAATCAAATTTGGAGTGAGTATACATTTACGTATTATAATCTCTATATAATTATTGGTCAACAAGTAGGCACTATTTATGGAACATTAATGTTTAGTTGTTGTGTTGGCTGGTGAATGATAGTAATTTATTCTTGTGTTTGAACTATCATTGATTGTTCCCAGTCATCTCATTCATGTATTTGTTGTTGTAATGAAAGATGTTTTGAGCTGAATTTCGTGCCTTTGAATTTGTTTGTGTTTTAGGTATATAGAGTATCAGATATGGAACTTGTCAGGGTGCTTTCTAGTGCAGAGGATGAGGTCAATGTGGCATGCTTTCATCCTTTTCCTGGGGGAGGGCTTGTCTATGGAACCAAGGTATGCTTTTGAATGCAAACTGAAAATTTTCACTTATATTATTTGATTGATAACCCTTTGCTCGTGGTGGTTGTAGGAAGGAAAGCTTAGGGTCTTCCAGTTTGACCGTACTTGTAATGTGAATGGCACTGGATCTGGTTACTTCCCTGAGGAGAACATGATTGGAGTCGATCAATGA

Protein sequence

>MS.gene89532.t1

MEFSMESAELHPLCHDQPSSSQNSNTSGRNVFSLLAQREISPRNKHVRKCHWGESSESKSGCSRSRTVVDAKCGLLSWVEAESLQHLSAKYCPLLPAPRSTIAAAFSPDGKILASTHGDHTVKIIDCETGNCLKVLVGHRRTPWVVRFHPLQRQILASGSLDQEVRLWDASSSEWILSHYFYRPIASLAFHANGEIIAVASGHKLYVWHYKNARELSSPVFVLKTRRSLRAVHFHPHGAPYLLTAQVNDLNSSDCSMTEATSHGHLEYPPPAVFVTNVHPRTQINMSSEPPVSRVELQHASNDVGLSSMQVEQYGTRLSNSEIPTSSQTGAEYNGHTTLPNQMRIGINNLTMGGREAYETEPAEASQHENADHVVKRVELSELGQFPQIVPSPDSNGWELPFLQGWLVGQSQVGVPSMLPQQIGSFTMPSNLFTTNVELAVPPSGMPNGISIPAVLQSGLQNQFSPSRLPVTDFGNLVPSINLPHDGFDSQTIINRIQSELAKSVATAAATELPCTVNLKVWSYDLKNPCAPLQRCRLTIPHVVLCSEMGAHFSPCGRFLAACVACMHPHMEADPGLQTLVHQEPGLPTSPTRHPISAHQVMYELRIYSLEEATFGSVLVSRPIRAAHCLTSIQFSPTSEHILLAYGRRHSSLLKSIVIDGEKTSSIYTVLEVYRVSDMELVRVLSSAEDEVNVACFHPFPGGGLVYGTKEGKLRVFQFDRTCNVNGTGSGYFPEENMIGVDQ