Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050319.t1 | XP_003625819.1 | 92.1 | 392 | 29 | 1 | 1 | 392 | 1 | 390 | 6.50E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050319.t1 | Q8L7R3 | 60.8 | 413 | 122 | 5 | 5 | 392 | 1 | 398 | 4.6e-139 | 495.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050319.t1 | G7KQU5 | 92.1 | 392 | 29 | 1 | 1 | 392 | 1 | 390 | 4.7e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene050319 | -0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene050319 | -0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene050319 | -0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene050330 | 0.816391 | 5.66E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene050558 | -0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene050623 | 0.801454 | 8.93E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene05119 | 0.822063 | 2.89E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene051662 | -0.813381 | 2.63E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene051663 | -0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene053836 | -0.846538 | 2.04E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene054473 | -0.81841 | 1.99E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene054942 | -0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene055277 | -0.806866 | 6.68E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene055422 | -0.817304 | 3.53E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene055428 | -0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene056069 | 0.840616 | 7.81E-58 | -1.69E-46 |
| MS.gene050319 | MS.gene057121 | -0.821653 | 3.60E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene057245 | -0.801555 | 8.52E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene057439 | -0.811788 | 5.88E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene058749 | -0.804541 | 2.06E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene05984 | -0.803858 | 2.85E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene061788 | -0.814567 | 1.44E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene061806 | -0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene06420 | -0.803498 | 3.39E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene064739 | -0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene065137 | -0.831781 | 1.37E-55 | -1.69E-46 |
| MS.gene050319 | MS.gene065138 | -0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene050319 | MS.gene06594 | -0.838479 | 2.81E-57 | -1.69E-46 |
| MS.gene050319 | MS.gene06691 | -0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene06806 | -0.835066 | 2.08E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene06900 | -0.81636 | 5.76E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene07089 | -0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene07115 | -0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene072087 | 0.806575 | 7.70E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene073340 | 0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene073962 | -0.840153 | 1.03E-57 | -1.69E-46 |
| MS.gene050319 | MS.gene07431 | -0.816784 | 4.63E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene08324 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene08665 | -0.80843 | 3.11E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene09136 | -0.859594 | 3.71E-63 | -1.69E-46 |
| MS.gene050319 | MS.gene20072 | 0.848798 | 4.87E-60 | -1.69E-46 |
| MS.gene050319 | MS.gene20612 | -0.833311 | 5.74E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene20912 | -0.804616 | 1.98E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene21597 | 0.826522 | 2.59E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene22311 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene22424 | 0.841915 | 3.56E-58 | -1.69E-46 |
| MS.gene050319 | MS.gene23795 | 0.830826 | 2.36E-55 | -1.69E-46 |
| MS.gene050319 | MS.gene23912 | -0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene24247 | -0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene28049 | -0.803039 | 4.22E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene28922 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene30964 | -0.861593 | 9.20E-64 | -1.69E-46 |
| MS.gene050319 | MS.gene31117 | -0.808253 | 3.39E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene31148 | -0.851529 | 8.37E-61 | -1.69E-46 |
| MS.gene050319 | MS.gene31519 | -0.817268 | 3.60E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene32786 | -0.800735 | 1.25E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene35394 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene37213 | -0.814646 | 1.39E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene40463 | -0.803045 | 4.20E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene42724 | -0.802751 | 4.84E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene43954 | -0.810121 | 1.35E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene44007 | -0.810833 | 9.47E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene44135 | 0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene45498 | -0.85787 | 1.22E-62 | -1.69E-46 |
| MS.gene050319 | MS.gene46176 | -0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene46352 | -0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene48442 | 0.850272 | 1.89E-60 | -1.69E-46 |
| MS.gene050319 | MS.gene48577 | -0.80215 | 6.43E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene50537 | 0.826535 | 2.57E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene50595 | -0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene50644 | -0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene52399 | -0.811298 | 7.51E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene54700 | -0.840746 | 7.22E-58 | -1.69E-46 |
| MS.gene050319 | MS.gene55219 | 0.808279 | 3.35E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene55695 | -0.821639 | 3.63E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene56484 | -0.808393 | 3.17E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene57121 | -0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene57160 | 0.812744 | 3.63E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene57162 | 0.821942 | 3.09E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene57299 | -0.815895 | 7.31E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene57321 | -0.809366 | 1.96E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene57577 | 0.855137 | 7.72E-62 | -1.69E-46 |
| MS.gene050319 | MS.gene57643 | -0.800592 | 1.34E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene57945 | -0.818675 | 1.73E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene58537 | -0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene59218 | 0.821129 | 4.76E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene59608 | -0.802454 | 5.57E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene59730 | -0.820404 | 6.98E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene59876 | -0.805883 | 1.08E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene59903 | -0.801445 | 8.98E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene60909 | -0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene61507 | -0.809003 | 2.34E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene62419 | -0.812697 | 3.72E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene62645 | -0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene62847 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene64621 | -0.85095 | 1.22E-60 | -1.69E-46 |
| MS.gene050319 | MS.gene65084 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene65106 | -0.802826 | 4.67E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene65665 | -0.833613 | 4.82E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene65851 | -0.804589 | 2.01E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene66064 | -0.807093 | 5.98E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene66082 | 0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene66332 | -0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene66407 | -0.806102 | 9.68E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene66497 | -0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene66884 | -0.844695 | 6.45E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene67384 | -0.815536 | 8.79E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene67557 | 0.813479 | 2.51E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene68168 | -0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene68764 | -0.847236 | 1.31E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene68907 | -0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene050319 | MS.gene68933 | -0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene69935 | -0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene70566 | -0.809498 | 1.84E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene70989 | 0.830104 | 3.54E-55 | -1.69E-46 |
| MS.gene050319 | MS.gene71890 | 0.821015 | 5.05E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene72851 | 0.832472 | 9.27E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene73227 | -0.826979 | 2.01E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene74587 | -0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene74922 | -0.810676 | 1.02E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene74960 | -0.843042 | 1.79E-58 | -1.69E-46 |
| MS.gene050319 | MS.gene75021 | -0.826257 | 3.00E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene75069 | -0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene76043 | 0.826265 | 2.98E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene77584 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene78202 | -0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene79217 | -0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene79290 | -0.844377 | 7.85E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene81029 | -0.801129 | 1.04E-48 | -1.69E-46 |
| MS.gene050319 | MS.gene82306 | -0.810237 | 1.27E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene83563 | 0.824553 | 7.59E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene84396 | -0.801716 | 7.90E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene84404 | -0.824705 | 6.98E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene86966 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene88522 | -0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene89532 | 0.812583 | 3.94E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene90704 | -0.808506 | 2.99E-50 | -1.69E-46 |
| MS.gene050319 | MS.gene91150 | -0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene91547 | -0.824293 | 8.73E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene92548 | -0.824782 | 6.70E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene93385 | -0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene050319 | MS.gene94818 | 0.83698 | 6.81E-57 | -1.69E-46 |
| MS.gene050319 | MS.gene95864 | -0.813998 | 1.93E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene96096 | -0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene96220 | -0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene96331 | 0.820849 | 5.52E-53 | -1.69E-46 |
| MS.gene050319 | MS.gene97268 | -0.805792 | 1.13E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene99165 | -0.834579 | 2.76E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene99540 | -0.811988 | 5.31E-51 | -1.69E-46 |
| MS.gene050319 | MS.gene99622 | -0.82988 | 4.02E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050319.t1 | MTR_7g104580 | 98.724 | 392 | 3 | 1 | 1 | 392 | 1 | 390 | 0.0 | 798 |
| MS.gene050319.t1 | MTR_7g104580 | 98.681 | 379 | 3 | 1 | 1 | 379 | 1 | 377 | 0.0 | 771 |
| MS.gene050319.t1 | MTR_1g022005 | 71.059 | 387 | 91 | 3 | 2 | 379 | 4 | 378 | 0.0 | 569 |
| MS.gene050319.t1 | MTR_1g022005 | 72.267 | 375 | 92 | 2 | 5 | 379 | 1 | 363 | 0.0 | 564 |
| MS.gene050319.t1 | MTR_8g033180 | 30.522 | 249 | 151 | 5 | 87 | 335 | 75 | 301 | 4.43e-32 | 127 |
| MS.gene050319.t1 | MTR_8g033180 | 30.469 | 256 | 152 | 6 | 87 | 342 | 75 | 304 | 5.93e-32 | 126 |
| MS.gene050319.t1 | MTR_4g127910 | 27.461 | 193 | 123 | 7 | 175 | 360 | 157 | 339 | 3.76e-11 | 64.7 |
| MS.gene050319.t1 | MTR_4g127910 | 27.461 | 193 | 123 | 7 | 175 | 360 | 157 | 339 | 4.08e-11 | 64.3 |
| MS.gene050319.t1 | MTR_2g438210 | 27.461 | 193 | 123 | 7 | 175 | 360 | 157 | 339 | 4.10e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050319.t1 | AT1G80950 | 61.538 | 403 | 115 | 4 | 5 | 382 | 1 | 388 | 3.66e-180 | 506 |
| MS.gene050319.t1 | AT1G80950 | 61.500 | 400 | 114 | 4 | 5 | 379 | 1 | 385 | 4.89e-179 | 503 |
| MS.gene050319.t1 | AT2G45670 | 28.395 | 324 | 180 | 7 | 65 | 376 | 78 | 361 | 1.42e-35 | 137 |
| MS.gene050319.t1 | AT2G45670 | 26.222 | 225 | 119 | 6 | 65 | 277 | 78 | 267 | 1.19e-11 | 65.5 |
Find 117 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTATCGGCATACAATT+TGG | 0.149590 | 7.2:+8275031 | None:intergenic |
| CCCGCTTGGGATTCCATATC+TGG | 0.187030 | 7.2:-8276334 | MS.gene050319:CDS |
| TCGGATTTCAAGGGTGTTTC+AGG | 0.208708 | 7.2:-8277555 | MS.gene050319:intron |
| TCTTGTTCATCTTCACGATT+AGG | 0.275081 | 7.2:+8279007 | None:intergenic |
| CCTGGAAATAGCATCATTAA+TGG | 0.282235 | 7.2:+8277204 | None:intergenic |
| GGCGGTGGTTCCGTTTGGTT+TGG | 0.286061 | 7.2:+8279315 | None:intergenic |
| TGGTTTATTATGTGGTTTGT+AGG | 0.301047 | 7.2:-8279051 | MS.gene050319:CDS |
| AATTTGATACTTTCTGATAT+CGG | 0.308202 | 7.2:-8273793 | MS.gene050319:CDS |
| ACCAGGTCTTCCCGTCTCTT+CGG | 0.316502 | 7.2:+8278141 | None:intergenic |
| ACAAGAGGATTATGCTCATT+TGG | 0.318547 | 7.2:-8278990 | MS.gene050319:CDS |
| CTATGTTCAGCGGGAATCTA+AGG | 0.320808 | 7.2:-8277580 | MS.gene050319:CDS |
| TATGTTCGCAACGATGTATA+CGG | 0.342263 | 7.2:-8279178 | MS.gene050319:CDS |
| TTCCTCTTGTTGGTCTCATC+AGG | 0.346722 | 7.2:-8277911 | MS.gene050319:intron |
| CCAGGTCTTCCCGTCTCTTC+GGG | 0.351063 | 7.2:+8278142 | None:intergenic |
| TGAAATTATCAATCGTCTTT+CGG | 0.353125 | 7.2:+8273703 | None:intergenic |
| CCATTAATGATGCTATTTCC+AGG | 0.355192 | 7.2:-8277204 | MS.gene050319:intron |
| GCGGTGGTTCCGTTTGGTTT+GGG | 0.360935 | 7.2:+8279316 | None:intergenic |
| TTAATGGAGCAGATTCATTC+TGG | 0.361886 | 7.2:+8277220 | None:intergenic |
| ACATTATCGGCATACAATTT+GGG | 0.362174 | 7.2:+8275032 | None:intergenic |
| TTCTTCTAACTCTTTCAATC+AGG | 0.368572 | 7.2:-8278879 | MS.gene050319:intron |
| GTGGCTAAGCTTCCTCTTGT+TGG | 0.377303 | 7.2:-8277921 | MS.gene050319:CDS |
| ACGATGGGAAGAGGAGAGTT+AGG | 0.381826 | 7.2:-8279154 | MS.gene050319:CDS |
| GATTCTTGCTGTAACGGTTT+TGG | 0.383612 | 7.2:-8279074 | MS.gene050319:CDS |
| ATTTGATACTTTCTGATATC+GGG | 0.387507 | 7.2:-8273792 | MS.gene050319:CDS |
| CCCAAGCGGGGCTAAATCTC+TGG | 0.389493 | 7.2:+8276347 | None:intergenic |
| CTTGTTCATCTTCACGATTA+GGG | 0.395614 | 7.2:+8279008 | None:intergenic |
| CAAGAGGATTATGCTCATTT+GGG | 0.398831 | 7.2:-8278989 | MS.gene050319:CDS |
| TTTAAAATTACAGGAAGTAC+TGG | 0.402772 | 7.2:+8276379 | None:intergenic |
| CTATCCCTCACAGCAGGAAA+TGG | 0.406245 | 7.2:-8275060 | MS.gene050319:CDS |
| ATCTAATCACGTGTCATACT+TGG | 0.418603 | 7.2:-8278110 | MS.gene050319:CDS |
| CGATAATGTTAGACGGTTGA+TGG | 0.421003 | 7.2:-8275018 | MS.gene050319:CDS |
| AAGAGGAGAGTTAGGAGCTA+AGG | 0.421388 | 7.2:-8279146 | MS.gene050319:CDS |
| ACAGCAAGAATCACTCTAAT+CGG | 0.424110 | 7.2:+8279085 | None:intergenic |
| ATAAGTACTTACCCCAGATA+TGG | 0.424825 | 7.2:+8276321 | None:intergenic |
| GCGGTGGCGGTGGTTCCGTT+TGG | 0.434530 | 7.2:+8279310 | None:intergenic |
| ATCTAAGGCATCGGATTTCA+AGG | 0.439623 | 7.2:-8277565 | MS.gene050319:CDS |
| CATCAACCGTCTAACATTAT+CGG | 0.444546 | 7.2:+8275019 | None:intergenic |
| ACCAGAGATTTAGCCCCGCT+TGG | 0.445067 | 7.2:-8276348 | MS.gene050319:CDS |
| GTCACGAACGGTGGCGGTGG+CGG | 0.447445 | 7.2:+8279297 | None:intergenic |
| CTTCCCGTCTCTTCGGGCTG+AGG | 0.450315 | 7.2:+8278148 | None:intergenic |
| CTCCTTCCATTCAAGACTGG+TGG | 0.450968 | 7.2:-8276418 | MS.gene050319:CDS |
| AGAAGTGTTATTGTTAAGTG+TGG | 0.451603 | 7.2:-8278956 | MS.gene050319:CDS |
| TCTATGAACAACAATGATGA+AGG | 0.458558 | 7.2:-8279377 | None:intergenic |
| GGTTTATTATGTGGTTTGTA+GGG | 0.460729 | 7.2:-8279050 | MS.gene050319:CDS |
| GCAGAAGGTACAACCACAAA+TGG | 0.460753 | 7.2:-8276448 | MS.gene050319:intron |
| GTTCCCAAGCTTTGTTGCTA+AGG | 0.464733 | 7.2:-8278062 | MS.gene050319:intron |
| ACGAACGGTGGCGGTGGCGG+TGG | 0.464943 | 7.2:+8279300 | None:intergenic |
| GCGGGGCTAAATCTCTGGTA+AGG | 0.469915 | 7.2:+8276352 | None:intergenic |
| CCAGAGATTTAGCCCCGCTT+GGG | 0.471933 | 7.2:-8276347 | MS.gene050319:CDS |
| TTCCTCCTTCCATTCAAGAC+TGG | 0.472216 | 7.2:-8276421 | MS.gene050319:CDS |
| TAGCTCCGCCGCGGTGGTGA+TGG | 0.474729 | 7.2:+8279228 | None:intergenic |
| CAAACCTTAGCAACAAAGCT+TGG | 0.475847 | 7.2:+8278058 | None:intergenic |
| ATGCGGCGAATTTCTTCTCT+AGG | 0.476450 | 7.2:+8279200 | None:intergenic |
| GGTGGTGATGGTTGTGGTGG+TGG | 0.476569 | 7.2:+8279240 | None:intergenic |
| ATTATGCTCATTTGGGTGGG+TGG | 0.476792 | 7.2:-8278982 | MS.gene050319:CDS |
| TGCTGTGAGGGATAGTATAT+AGG | 0.479278 | 7.2:+8275068 | None:intergenic |
| TAGAGTGATTCTTGCTGTAA+CGG | 0.482759 | 7.2:-8279080 | MS.gene050319:CDS |
| CCGCTTGGGATTCCATATCT+GGG | 0.486087 | 7.2:-8276333 | MS.gene050319:CDS |
| AAACCTCAGCCCGAAGAGAC+GGG | 0.491484 | 7.2:-8278151 | MS.gene050319:CDS |
| CCCGAAGAGACGGGAAGACC+TGG | 0.496793 | 7.2:-8278142 | MS.gene050319:CDS |
| AAACCTTAGCAACAAAGCTT+GGG | 0.500224 | 7.2:+8278059 | None:intergenic |
| AAGGAGGAAATCTCCATTTG+TGG | 0.502715 | 7.2:+8276435 | None:intergenic |
| ATCTACCATGCTGCTCTCAA+TGG | 0.506695 | 7.2:-8273754 | MS.gene050319:CDS |
| CAAACCTCAGCCCGAAGAGA+CGG | 0.512886 | 7.2:-8278152 | MS.gene050319:CDS |
| GTGGTTCCGTTTGGTTTGGG+TGG | 0.514377 | 7.2:+8279319 | None:intergenic |
| ATGCTCATTTGGGTGGGTGG+AGG | 0.521233 | 7.2:-8278979 | MS.gene050319:CDS |
| GTATACGGGACGATGGGAAG+AGG | 0.523782 | 7.2:-8279163 | MS.gene050319:CDS |
| AACAACAATGATGAAGGGGT+TGG | 0.524505 | 7.2:-8279371 | None:intergenic |
| ATCGTCACGAACGGTGGCGG+TGG | 0.532744 | 7.2:+8279294 | None:intergenic |
| CTATGAACAACAATGATGAA+GGG | 0.536298 | 7.2:-8279376 | None:intergenic |
| GTCTTGTAGCTCCGCCGCGG+TGG | 0.537793 | 7.2:+8279222 | None:intergenic |
| CCAGATATGGAATCCCAAGC+GGG | 0.540197 | 7.2:+8276334 | None:intergenic |
| CGCCGCGGTGGTGATGGTTG+TGG | 0.540201 | 7.2:+8279234 | None:intergenic |
| TCAAAACCACCCAAACCAAA+CGG | 0.542315 | 7.2:-8279325 | MS.gene050319:CDS |
| TCTTTCGGACGCAAAACACT+AGG | 0.546460 | 7.2:+8273718 | None:intergenic |
| GAGGATTATGCTCATTTGGG+TGG | 0.550330 | 7.2:-8278986 | MS.gene050319:CDS |
| GAAGTGTTATTGTTAAGTGT+GGG | 0.550562 | 7.2:-8278955 | MS.gene050319:CDS |
| AACCACCAGTCTTGAATGGA+AGG | 0.550568 | 7.2:+8276416 | None:intergenic |
| ATCATCCATTTCCTGCTGTG+AGG | 0.561663 | 7.2:+8275055 | None:intergenic |
| TCATCCATTTCCTGCTGTGA+GGG | 0.563139 | 7.2:+8275056 | None:intergenic |
| TGGTTGCATCTATGTTCAGC+GGG | 0.565814 | 7.2:-8277589 | MS.gene050319:CDS |
| ATGTTCGCAACGATGTATAC+GGG | 0.570685 | 7.2:-8279177 | MS.gene050319:CDS |
| AACGATGTATACGGGACGAT+GGG | 0.575513 | 7.2:-8279169 | MS.gene050319:CDS |
| AGGATTATGCTCATTTGGGT+GGG | 0.576961 | 7.2:-8278985 | MS.gene050319:CDS |
| ACGATCGTCACGAACGGTGG+CGG | 0.579269 | 7.2:+8279291 | None:intergenic |
| AGTGAATCGGATTTGAGAAG+AGG | 0.583170 | 7.2:+8279268 | None:intergenic |
| TACATCGTTGCGAACATATG+CGG | 0.583809 | 7.2:+8279183 | None:intergenic |
| AGCAACAAAGCTTGGGAACG+AGG | 0.583959 | 7.2:+8278066 | None:intergenic |
| TCGGACGCAAAACACTAGGC+AGG | 0.584355 | 7.2:+8273722 | None:intergenic |
| CGCGGTGGTGATGGTTGTGG+TGG | 0.594441 | 7.2:+8279237 | None:intergenic |
| TTGGTTGCATCTATGTTCAG+CGG | 0.596574 | 7.2:-8277590 | MS.gene050319:CDS |
| CGGGGCTAAATCTCTGGTAA+GGG | 0.598199 | 7.2:+8276353 | None:intergenic |
| TAATCGTGAAGATGAACAAG+AGG | 0.604391 | 7.2:-8279005 | MS.gene050319:CDS |
| TATATACTATCCCTCACAGC+AGG | 0.605563 | 7.2:-8275066 | MS.gene050319:CDS |
| CGCTTGGGATTCCATATCTG+GGG | 0.609507 | 7.2:-8276332 | MS.gene050319:intron |
| TCAGCGGGAATCTAAGGCAT+CGG | 0.612555 | 7.2:-8277574 | MS.gene050319:CDS |
| TATGAACAACAATGATGAAG+GGG | 0.614604 | 7.2:-8279375 | None:intergenic |
| GGTGGTGGAAGAGAGTGAAT+CGG | 0.617416 | 7.2:+8279255 | None:intergenic |
| CACCACAACCATCACCACCG+CGG | 0.617640 | 7.2:-8279236 | MS.gene050319:CDS |
| CAACGATGTATACGGGACGA+TGG | 0.619929 | 7.2:-8279170 | MS.gene050319:CDS |
| TGATTAGATATTATTACACC+AGG | 0.645827 | 7.2:+8278124 | None:intergenic |
| AAGAGGACGATCGTCACGAA+CGG | 0.648748 | 7.2:+8279285 | None:intergenic |
| TATTACCATTGAGAGCAGCA+TGG | 0.649402 | 7.2:+8273749 | None:intergenic |
| AGGACGATCGTCACGAACGG+TGG | 0.650813 | 7.2:+8279288 | None:intergenic |
| TGTATGCCGATAATGTTAGA+CGG | 0.651296 | 7.2:-8275025 | MS.gene050319:CDS |
| CACCAGTCTTGAATGGAAGG+AGG | 0.655112 | 7.2:+8276419 | None:intergenic |
| CACCTGATGAGACCAACAAG+AGG | 0.657451 | 7.2:+8277909 | None:intergenic |
| CCCAGATATGGAATCCCAAG+CGG | 0.662668 | 7.2:+8276333 | None:intergenic |
| GCTGAACATAGATGCAACCA+AGG | 0.665052 | 7.2:+8277592 | None:intergenic |
| CACAACCATCACCACCGCGG+CGG | 0.665087 | 7.2:-8279233 | MS.gene050319:CDS |
| TCTAAGGCATCGGATTTCAA+GGG | 0.666480 | 7.2:-8277564 | MS.gene050319:CDS |
| TAGACGGTTGATGGCTACTG+AGG | 0.676874 | 7.2:-8275009 | MS.gene050319:intron |
| TATAATTTACAAACTGACAG+AGG | 0.676920 | 7.2:+8275108 | None:intergenic |
| TCCATCTATGAAGAGATCAG+TGG | 0.684513 | 7.2:-8277940 | MS.gene050319:intron |
| GACAGAGGAGAAATATCACA+TGG | 0.695658 | 7.2:+8275123 | None:intergenic |
| TAGGTCTTGTAGCTCCGCCG+CGG | 0.700267 | 7.2:+8279219 | None:intergenic |
| CAGATATGGAATCCCAAGCG+GGG | 0.704694 | 7.2:+8276335 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTAAGATAAATTTCA+AGG | + | chr7.2:8277407-8277426 | None:intergenic | 10.0% |
| !! | AGTAATGAGATAAAAATAAA+AGG | + | chr7.2:8279028-8279047 | None:intergenic | 15.0% |
| !! | ATAAATTATGTATTCAAACA+TGG | - | chr7.2:8278499-8278518 | MS.gene050319:intron | 15.0% |
| !! | TACATTAGAAATAATCAAAA+AGG | + | chr7.2:8279245-8279264 | None:intergenic | 15.0% |
| !!! | CATTTTTATGCTAATTTAAT+TGG | - | chr7.2:8277857-8277876 | MS.gene050319:intron | 15.0% |
| !!! | TACTTTGAAATATAAGATAT+GGG | - | chr7.2:8277054-8277073 | MS.gene050319:intron | 15.0% |
| !!! | TTACTTTGAAATATAAGATA+TGG | - | chr7.2:8277053-8277072 | MS.gene050319:intron | 15.0% |
| !!! | TTTTATTAGCATCTTTAATT+GGG | - | chr7.2:8274318-8274337 | MS.gene050319:intron | 15.0% |
| !!! | TTTTCATTTTTGGATTTTAT+TGG | - | chr7.2:8274165-8274184 | MS.gene050319:intron | 15.0% |
| !!! | TTTTTATTAGCATCTTTAAT+TGG | - | chr7.2:8274317-8274336 | MS.gene050319:intron | 15.0% |
| !! | AAAATAAATAGTTCCACATT+TGG | - | chr7.2:8277217-8277236 | MS.gene050319:CDS | 20.0% |
| !! | AAAATAGTCAATACATAACA+TGG | + | chr7.2:8279134-8279153 | None:intergenic | 20.0% |
| !! | AAATATAACTATATGCCTTA+AGG | - | chr7.2:8276420-8276439 | MS.gene050319:CDS | 20.0% |
| !! | AACACATGAATATAACTAAA+AGG | + | chr7.2:8275710-8275729 | None:intergenic | 20.0% |
| !! | AATTTGATACTTTCTGATAT+CGG | - | chr7.2:8279282-8279301 | MS.gene050319:CDS | 20.0% |
| !! | ACAGATATATATGTTCATTA+TGG | + | chr7.2:8275061-8275080 | None:intergenic | 20.0% |
| !! | ATATCACTTTGTAATGTTAA+CGG | + | chr7.2:8277654-8277673 | None:intergenic | 20.0% |
| !! | ATGAATAATTTGGATAATAC+AGG | + | chr7.2:8276591-8276610 | None:intergenic | 20.0% |
| !! | ATTGTGTTTATTACATAAGA+CGG | + | chr7.2:8277891-8277910 | None:intergenic | 20.0% |
| !! | CAGAAATTTACCTTAAAATT+GGG | - | chr7.2:8277363-8277382 | MS.gene050319:intron | 20.0% |
| !! | CCAAAATATAACATATTTAC+CGG | + | chr7.2:8276863-8276882 | None:intergenic | 20.0% |
| !! | TATAATTATATGTTCAACCA+TGG | - | chr7.2:8278416-8278435 | MS.gene050319:intron | 20.0% |
| !! | TCAATATTTCTTTCTTGAAA+AGG | - | chr7.2:8278109-8278128 | MS.gene050319:CDS | 20.0% |
| !! | TGATACAAATTTAATGATAG+TGG | - | chr7.2:8277549-8277568 | MS.gene050319:intron | 20.0% |
| !! | TTATTATGAAGAAGTAAAGT+TGG | - | chr7.2:8274399-8274418 | MS.gene050319:intron | 20.0% |
| !! | TTGTTCAATTTCAATTCATT+AGG | - | chr7.2:8274248-8274267 | MS.gene050319:intron | 20.0% |
| !! | TTTGAGAAACATGAATAATT+TGG | + | chr7.2:8276601-8276620 | None:intergenic | 20.0% |
| !!! | ATATGTGTTGAACATATTTT+TGG | - | chr7.2:8276885-8276904 | MS.gene050319:intron | 20.0% |
| !!! | ATGTATTGACTATTTTGTTT+AGG | - | chr7.2:8279138-8279157 | MS.gene050319:CDS | 20.0% |
| !!! | ATTTTAAAAACAACAGACAT+TGG | + | chr7.2:8276326-8276345 | None:intergenic | 20.0% |
| !!! | CAAAAAAGTGTTTGAATATT+AGG | - | chr7.2:8278539-8278558 | MS.gene050319:intron | 20.0% |
| !!! | TAAACATCCTGTTATTTTAT+CGG | - | chr7.2:8276916-8276935 | MS.gene050319:intron | 20.0% |
| !!! | TAAGGGTATTTTAAAATTAC+AGG | + | chr7.2:8276708-8276727 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACAACAGACATT+GGG | + | chr7.2:8276325-8276344 | None:intergenic | 20.0% |
| ! | AAAATCCATAAAACTAAACC+AGG | + | chr7.2:8275216-8275235 | None:intergenic | 25.0% |
| ! | AAACCCATATATAATCTAAC+TGG | + | chr7.2:8276030-8276049 | None:intergenic | 25.0% |
| ! | AAATATGAAAAGACCAACAT+AGG | + | chr7.2:8275655-8275674 | None:intergenic | 25.0% |
| ! | AATATGAAAAGACCAACATA+GGG | + | chr7.2:8275654-8275673 | None:intergenic | 25.0% |
| ! | ACAAATAATGTATAGTCTAC+AGG | + | chr7.2:8275761-8275780 | None:intergenic | 25.0% |
| ! | AGTTAGATTATATATGGGTT+TGG | - | chr7.2:8276029-8276048 | MS.gene050319:intron | 25.0% |
| ! | ATCAACTTCAGCAATAAAAT+AGG | + | chr7.2:8278159-8278178 | None:intergenic | 25.0% |
| ! | ATTATGAAGTTACAAGGAAA+TGG | + | chr7.2:8276395-8276414 | None:intergenic | 25.0% |
| ! | ATTATTCTTTATCACCATTC+AGG | + | chr7.2:8278993-8279012 | None:intergenic | 25.0% |
| ! | ATTATTTGTTTAGTTGCAAC+TGG | - | chr7.2:8275772-8275791 | MS.gene050319:intron | 25.0% |
| ! | ATTTGATACTTTCTGATATC+GGG | - | chr7.2:8279283-8279302 | MS.gene050319:CDS | 25.0% |
| ! | CAAAATATAATGAAACAAGC+TGG | + | chr7.2:8274836-8274855 | None:intergenic | 25.0% |
| ! | CAAATAATGTATAGTCTACA+GGG | + | chr7.2:8275760-8275779 | None:intergenic | 25.0% |
| ! | CCACAATATAAAAACTTTAG+AGG | + | chr7.2:8274604-8274623 | None:intergenic | 25.0% |
| ! | CGATGTAACATTTATCTTAT+TGG | - | chr7.2:8279181-8279200 | MS.gene050319:CDS | 25.0% |
| ! | GCAGAAATTTACCTTAAAAT+TGG | - | chr7.2:8277362-8277381 | MS.gene050319:intron | 25.0% |
| ! | GTAAGCTAAAGTTTGTATAT+TGG | + | chr7.2:8276068-8276087 | None:intergenic | 25.0% |
| ! | GTATGAAATTCATATTCGTT+TGG | - | chr7.2:8278796-8278815 | MS.gene050319:intron | 25.0% |
| ! | TATAATTTACAAACTGACAG+AGG | + | chr7.2:8277970-8277989 | None:intergenic | 25.0% |
| ! | TATCACTTTGTAATGTTAAC+GGG | + | chr7.2:8277653-8277672 | None:intergenic | 25.0% |
| ! | TGAAAAGGTAGTTAAATAGT+TGG | - | chr7.2:8278124-8278143 | MS.gene050319:CDS | 25.0% |
| ! | TGATTAGATATTATTACACC+AGG | + | chr7.2:8274954-8274973 | None:intergenic | 25.0% |
| ! | TGTAAGATTATGAAGTTACA+AGG | + | chr7.2:8276401-8276420 | None:intergenic | 25.0% |
| ! | TTTACATTATGCTTATACCA+TGG | + | chr7.2:8278436-8278455 | None:intergenic | 25.0% |
| ! | TTTGTATATTGGAGAGATAA+AGG | + | chr7.2:8276057-8276076 | None:intergenic | 25.0% |
| !! | AACATAGCCAATAAACTTTT+TGG | + | chr7.2:8277604-8277623 | None:intergenic | 25.0% |
| !! | ACATAGCCAATAAACTTTTT+GGG | + | chr7.2:8277603-8277622 | None:intergenic | 25.0% |
| !! | AGTTTATCATATTCGATTTG+TGG | - | chr7.2:8274289-8274308 | MS.gene050319:intron | 25.0% |
| !! | ATTTTATCGGTGTGTTTATA+TGG | - | chr7.2:8276929-8276948 | MS.gene050319:intron | 25.0% |
| !! | ATTTTTATCTCATTACTGTC+TGG | - | chr7.2:8279031-8279050 | MS.gene050319:CDS | 25.0% |
| !! | CAAATTTTAAACATCCTGAA+TGG | - | chr7.2:8278917-8278936 | MS.gene050319:CDS | 25.0% |
| !! | CCGGTAAATATGTTATATTT+TGG | - | chr7.2:8276860-8276879 | MS.gene050319:intron | 25.0% |
| !! | TGGGTCAAAAACATAAATTT+TGG | + | chr7.2:8276306-8276325 | None:intergenic | 25.0% |
| !! | TTTAAAATTACAGGAAGTAC+TGG | + | chr7.2:8276699-8276718 | None:intergenic | 25.0% |
| !! | TTTCTCAAATATTTTGCAGA+AGG | - | chr7.2:8276612-8276631 | MS.gene050319:intron | 25.0% |
| !! | TTTTTGCATTCAAAAGTTTG+AGG | - | chr7.2:8278295-8278314 | MS.gene050319:intron | 25.0% |
| !!! | CCTCTAAAGTTTTTATATTG+TGG | - | chr7.2:8274601-8274620 | MS.gene050319:intron | 25.0% |
| !!! | GTTTAGTTTTATGGATTTTG+TGG | - | chr7.2:8275217-8275236 | MS.gene050319:intron | 25.0% |
| !!! | TGCATTATTTTTTCATTGCA+AGG | - | chr7.2:8275404-8275423 | MS.gene050319:intron | 25.0% |
| !!! | TTCTAAGTTGATCTTAATGT+TGG | - | chr7.2:8277921-8277940 | MS.gene050319:CDS | 25.0% |
| AAAAATAGTGCAAGACTTCT+TGG | + | chr7.2:8278845-8278864 | None:intergenic | 30.0% | |
| AAACACACCGATAAAATAAC+AGG | + | chr7.2:8276926-8276945 | None:intergenic | 30.0% | |
| AACATTATCGGCATACAATT+TGG | + | chr7.2:8278047-8278066 | None:intergenic | 30.0% | |
| AAGGTAGTTAAATAGTTGGA+AGG | - | chr7.2:8278128-8278147 | MS.gene050319:CDS | 30.0% | |
| AATTTGTGGCAGCAATATAA+AGG | + | chr7.2:8274557-8274576 | None:intergenic | 30.0% | |
| ACATTATCGGCATACAATTT+GGG | + | chr7.2:8278046-8278065 | None:intergenic | 30.0% | |
| ACGCCAGTTAGATTATATAT+GGG | - | chr7.2:8276024-8276043 | MS.gene050319:intron | 30.0% | |
| ACTAAATGTGAAGAACCTTA+AGG | + | chr7.2:8276438-8276457 | None:intergenic | 30.0% | |
| ACTATTGGATGTATCTTAGT+TGG | - | chr7.2:8274793-8274812 | MS.gene050319:intron | 30.0% | |
| ATAGGTATTCCATATAATGC+GGG | + | chr7.2:8277741-8277760 | None:intergenic | 30.0% | |
| ATAGTCAATACATAACATGG+AGG | + | chr7.2:8279131-8279150 | None:intergenic | 30.0% | |
| ATCACTTTGTAATGTTAACG+GGG | + | chr7.2:8277652-8277671 | None:intergenic | 30.0% | |
| ATCTTTAATTGGGATAAGTG+TGG | - | chr7.2:8274328-8274347 | MS.gene050319:intron | 30.0% | |
| ATTGCCAGAATAGGTATTTA+CGG | - | chr7.2:8278630-8278649 | MS.gene050319:intron | 30.0% | |
| CATAGGTATTCCATATAATG+CGG | + | chr7.2:8277742-8277761 | None:intergenic | 30.0% | |
| CATTTGGTATATGTTTCTTC+TGG | - | chr7.2:8277233-8277252 | MS.gene050319:CDS | 30.0% | |
| CTAGTTAAGTTTATCGAAAC+TGG | - | chr7.2:8274709-8274728 | MS.gene050319:intron | 30.0% | |
| GAAGAAACATATACCAAATG+TGG | + | chr7.2:8277233-8277252 | None:intergenic | 30.0% | |
| GAGTTATTCTTTGTCACATA+TGG | - | chr7.2:8276481-8276500 | MS.gene050319:intron | 30.0% | |
| GATGTATCTTAGTTGGTTAT+TGG | - | chr7.2:8274800-8274819 | MS.gene050319:intron | 30.0% | |
| TAAACCGTAAATACCTATTC+TGG | + | chr7.2:8278637-8278656 | None:intergenic | 30.0% | |
| TAATTTCGCCACAATATTCA+AGG | + | chr7.2:8274493-8274512 | None:intergenic | 30.0% | |
| TACCTGTATTTATAGCCTAA+AGG | - | chr7.2:8279099-8279118 | MS.gene050319:CDS | 30.0% | |
| TACCTTTAGGCTATAAATAC+AGG | + | chr7.2:8279104-8279123 | None:intergenic | 30.0% | |
| TACGCCAGTTAGATTATATA+TGG | - | chr7.2:8276023-8276042 | MS.gene050319:intron | 30.0% | |
| TCGTGTAGTTTAACTAAGTT+GGG | - | chr7.2:8275959-8275978 | MS.gene050319:intron | 30.0% | |
| TCTTTAATTGGGATAAGTGT+GGG | - | chr7.2:8274329-8274348 | MS.gene050319:intron | 30.0% | |
| TGAAATATAAGATATGGGTG+AGG | - | chr7.2:8277059-8277078 | MS.gene050319:intron | 30.0% | |
| TGAATATTGTGGCGAAATTA+GGG | - | chr7.2:8274493-8274512 | MS.gene050319:intron | 30.0% | |
| TGAATGTCCTGTTAAAATCT+TGG | - | chr7.2:8275110-8275129 | MS.gene050319:CDS | 30.0% | |
| TGTTCCATTAAGTCAAACTA+GGG | - | chr7.2:8275726-8275745 | MS.gene050319:intron | 30.0% | |
| TTCGTGTAGTTTAACTAAGT+TGG | - | chr7.2:8275958-8275977 | MS.gene050319:intron | 30.0% | |
| TTCTTCTAACTCTTTCAATC+AGG | - | chr7.2:8274196-8274215 | MS.gene050319:intron | 30.0% | |
| TTGAATATTGTGGCGAAATT+AGG | - | chr7.2:8274492-8274511 | MS.gene050319:intron | 30.0% | |
| TTGATAAATTGATGAACCCT+AGG | - | chr7.2:8277807-8277826 | MS.gene050319:intron | 30.0% | |
| TTTATATTGTGGCTGCAATT+GGG | - | chr7.2:8274612-8274631 | MS.gene050319:intron | 30.0% | |
| TTTCTCGAATATTGTTTCAG+TGG | - | chr7.2:8278672-8278691 | MS.gene050319:intron | 30.0% | |
| ! | AAAATTCTCTCTAGTTTCCT+AGG | - | chr7.2:8277098-8277117 | MS.gene050319:intron | 30.0% |
| ! | AAATTCTCTCTAGTTTCCTA+GGG | - | chr7.2:8277099-8277118 | MS.gene050319:intron | 30.0% |
| ! | AGAGCTATGCTTTTCATTTT+TGG | - | chr7.2:8274155-8274174 | MS.gene050319:intron | 30.0% |
| ! | AGTTTATTGGCTATGTTGAA+AGG | - | chr7.2:8277607-8277626 | MS.gene050319:intron | 30.0% |
| ! | ATCATATTCGATTTGTGGTA+AGG | - | chr7.2:8274294-8274313 | MS.gene050319:intron | 30.0% |
| ! | ATGCGTGAGAATGTAAATTT+TGG | + | chr7.2:8277146-8277165 | None:intergenic | 30.0% |
| ! | ATTAATTTTGTGACGCTTGT+TGG | - | chr7.2:8278455-8278474 | MS.gene050319:intron | 30.0% |
| ! | CAGCAATATAAAGGCTTTAA+GGG | + | chr7.2:8274548-8274567 | None:intergenic | 30.0% |
| ! | GAAGTGTTATTGTTAAGTGT+GGG | - | chr7.2:8274120-8274139 | MS.gene050319:intron | 30.0% |
| ! | GGTTTATTATGTGGTTTGTA+GGG | - | chr7.2:8274025-8274044 | MS.gene050319:intron | 30.0% |
| ! | GTGCGACAAATTCATAATTT+TGG | - | chr7.2:8276955-8276974 | MS.gene050319:intron | 30.0% |
| ! | TAATGTATGTTTTGCTTGCA+GGG | - | chr7.2:8279258-8279277 | MS.gene050319:CDS | 30.0% |
| ! | TGGTTTATTATGTGGTTTGT+AGG | - | chr7.2:8274024-8274043 | MS.gene050319:intron | 30.0% |
| ! | TTGCAGTTGTGATACTTTTA+CGG | - | chr7.2:8274575-8274594 | MS.gene050319:intron | 30.0% |
| ! | TTTTATATTGTGGCTGCAAT+TGG | - | chr7.2:8274611-8274630 | MS.gene050319:intron | 30.0% |
| ! | TTTTTGTTACCCGCATTATA+TGG | - | chr7.2:8277729-8277748 | MS.gene050319:intron | 30.0% |
| !! | AAGATTTTAACAGGACATTC+AGG | + | chr7.2:8275111-8275130 | None:intergenic | 30.0% |
| !! | AGAAGTGTTATTGTTAAGTG+TGG | - | chr7.2:8274119-8274138 | MS.gene050319:intron | 30.0% |
| !! | ATGGAATCCAAGATTTTAAC+AGG | + | chr7.2:8275120-8275139 | None:intergenic | 30.0% |
| !! | ATTGACTATTTTGTTTAGGC+AGG | - | chr7.2:8279142-8279161 | MS.gene050319:CDS | 30.0% |
| !! | TTGACTATTTTGTTTAGGCA+GGG | - | chr7.2:8279143-8279162 | MS.gene050319:CDS | 30.0% |
| !!! | CTTTTTTTATTAGTTCCTCC+TGG | - | chr7.2:8275195-8275214 | MS.gene050319:intron | 30.0% |
| !!! | GAGAATTGTTTTGATCAATC+TGG | - | chr7.2:8278249-8278268 | MS.gene050319:intron | 30.0% |
| !!! | GTTATCTTCCTTCCTTTTTT+GGG | - | chr7.2:8275893-8275912 | MS.gene050319:intron | 30.0% |
| !!! | TCCTTATTGTTTTGATGTGA+CGG | - | chr7.2:8277772-8277791 | MS.gene050319:intron | 30.0% |
| !!! | TTATCTTCCTTCCTTTTTTG+GGG | - | chr7.2:8275894-8275913 | MS.gene050319:intron | 30.0% |
| AAAAAACCACCAGTCTTGAA+TGG | + | chr7.2:8276666-8276685 | None:intergenic | 35.0% | |
| AAAAAGGAAGGAAGATAACC+TGG | + | chr7.2:8275892-8275911 | None:intergenic | 35.0% | |
| AAAATGAGAGGTGGAATAGT+TGG | - | chr7.2:8274428-8274447 | MS.gene050319:intron | 35.0% | |
| AAACCTTAGCAACAAAGCTT+GGG | + | chr7.2:8275019-8275038 | None:intergenic | 35.0% | |
| AAGTTACAAGGAAATGGACA+TGG | + | chr7.2:8276389-8276408 | None:intergenic | 35.0% | |
| AAGTTGAGTACAGAAGGATT+AGG | + | chr7.2:8276825-8276844 | None:intergenic | 35.0% | |
| AATGCAGCATTCTCATTTCA+CGG | + | chr7.2:8275369-8275388 | None:intergenic | 35.0% | |
| ACAAGAGGATTATGCTCATT+TGG | - | chr7.2:8274085-8274104 | MS.gene050319:intron | 35.0% | |
| ACAGCAAGAATCACTCTAAT+CGG | + | chr7.2:8273993-8274012 | None:intergenic | 35.0% | |
| ACATATGGTAACACTAGCAT+TGG | - | chr7.2:8276496-8276515 | MS.gene050319:intron | 35.0% | |
| ACCATAAGTCATAGTTTCCT+AGG | + | chr7.2:8277827-8277846 | None:intergenic | 35.0% | |
| ACTTAGAAGTTGAGTACAGA+AGG | + | chr7.2:8276831-8276850 | None:intergenic | 35.0% | |
| AGTATCACAACTGCAATTTG+TGG | + | chr7.2:8274571-8274590 | None:intergenic | 35.0% | |
| AGTTACAAGGAAATGGACAT+GGG | + | chr7.2:8276388-8276407 | None:intergenic | 35.0% | |
| AGTTGGATAGCAAAAATGAG+AGG | - | chr7.2:8274416-8274435 | MS.gene050319:intron | 35.0% | |
| ATAAGGAATACCATGTCCAT+AGG | + | chr7.2:8277759-8277778 | None:intergenic | 35.0% | |
| ATAAGTACTTACCCCAGATA+TGG | + | chr7.2:8276757-8276776 | None:intergenic | 35.0% | |
| ATAGCTCGTTTGTACTTGAT+AGG | - | chr7.2:8276105-8276124 | MS.gene050319:intron | 35.0% | |
| ATATAATGAAACAAGCTGGC+CGG | + | chr7.2:8274832-8274851 | None:intergenic | 35.0% | |
| ATATGGAATACCTATGGACA+TGG | - | chr7.2:8277746-8277765 | MS.gene050319:intron | 35.0% | |
| ATCAAAGTCTAGTACTAGTG+TGG | + | chr7.2:8278612-8278631 | None:intergenic | 35.0% | |
| ATCCATAAAACTAAACCAGG+AGG | + | chr7.2:8275213-8275232 | None:intergenic | 35.0% | |
| ATCTAATCACGTGTCATACT+TGG | - | chr7.2:8274965-8274984 | MS.gene050319:intron | 35.0% | |
| ATTCGAGAAACTTGTGCATT+AGG | + | chr7.2:8278662-8278681 | None:intergenic | 35.0% | |
| CAAGAGGATTATGCTCATTT+GGG | - | chr7.2:8274086-8274105 | MS.gene050319:intron | 35.0% | |
| CATCAACCGTCTAACATTAT+CGG | + | chr7.2:8278059-8278078 | None:intergenic | 35.0% | |
| CCATAAGTCATAGTTTCCTA+GGG | + | chr7.2:8277826-8277845 | None:intergenic | 35.0% | |
| CCTGGAAATAGCATCATTAA+TGG | + | chr7.2:8275874-8275893 | None:intergenic | 35.0% | |
| CGCATTATATGGAATACCTA+TGG | - | chr7.2:8277740-8277759 | MS.gene050319:intron | 35.0% | |
| CGTTTGTACTTGATAGGTAT+GGG | - | chr7.2:8276111-8276130 | MS.gene050319:intron | 35.0% | |
| CTTGTTCATCTTCACGATTA+GGG | + | chr7.2:8274070-8274089 | None:intergenic | 35.0% | |
| GCAGCAATATAAAGGCTTTA+AGG | + | chr7.2:8274549-8274568 | None:intergenic | 35.0% | |
| GTCATAGCTCAAAAGACTAT+TGG | - | chr7.2:8274778-8274797 | MS.gene050319:intron | 35.0% | |
| GTGTTCCATTAAGTCAAACT+AGG | - | chr7.2:8275725-8275744 | MS.gene050319:intron | 35.0% | |
| GTTTGTACTTGATAGGTATG+GGG | - | chr7.2:8276112-8276131 | MS.gene050319:intron | 35.0% | |
| TAATCGTGAAGATGAACAAG+AGG | - | chr7.2:8274070-8274089 | MS.gene050319:intron | 35.0% | |
| TAGACTTTGATTGCCAGAAT+AGG | - | chr7.2:8278621-8278640 | MS.gene050319:intron | 35.0% | |
| TAGTACTAGTGTGGTATAAC+TGG | + | chr7.2:8278603-8278622 | None:intergenic | 35.0% | |
| TATGTTCGCAACGATGTATA+CGG | - | chr7.2:8273897-8273916 | MS.gene050319:intron | 35.0% | |
| TCGTTTGTACTTGATAGGTA+TGG | - | chr7.2:8276110-8276129 | MS.gene050319:intron | 35.0% | |
| TCTCTGCTTCATGTTTAACT+AGG | - | chr7.2:8274896-8274915 | MS.gene050319:intron | 35.0% | |
| TCTTGTTCATCTTCACGATT+AGG | + | chr7.2:8274071-8274090 | None:intergenic | 35.0% | |
| TGTATACTAATGTGCTCTAG+TGG | - | chr7.2:8275680-8275699 | MS.gene050319:intron | 35.0% | |
| TGTATGCCGATAATGTTAGA+CGG | - | chr7.2:8278050-8278069 | MS.gene050319:intron | 35.0% | |
| TTAATGGAGCAGATTCATTC+TGG | + | chr7.2:8275858-8275877 | None:intergenic | 35.0% | |
| TTATATTGTGGCTGCAATTG+GGG | - | chr7.2:8274613-8274632 | MS.gene050319:intron | 35.0% | |
| TTCTCGGAGGAAAAATTTGT+GGG | - | chr7.2:8277305-8277324 | MS.gene050319:intron | 35.0% | |
| TTGCCACCCAAAAAGTTTAT+TGG | - | chr7.2:8277594-8277613 | MS.gene050319:CDS | 35.0% | |
| TTGCGCATAACTCTAAACTA+CGG | + | chr7.2:8274646-8274665 | None:intergenic | 35.0% | |
| TTGGTATATGTTTCTTCTGG+TGG | - | chr7.2:8277236-8277255 | MS.gene050319:CDS | 35.0% | |
| TTTCTCGGAGGAAAAATTTG+TGG | - | chr7.2:8277304-8277323 | MS.gene050319:intron | 35.0% | |
| TTTGTACTTGATAGGTATGG+GGG | - | chr7.2:8276113-8276132 | MS.gene050319:intron | 35.0% | |
| ! | AAGACCCTAGTTTGACTTAA+TGG | + | chr7.2:8275733-8275752 | None:intergenic | 35.0% |
| ! | AAGTGTGGGAGATTTTACTT+GGG | - | chr7.2:8274343-8274362 | MS.gene050319:intron | 35.0% |
| ! | AAGTTGATCTTAATGTTGGC+AGG | - | chr7.2:8277925-8277944 | MS.gene050319:CDS | 35.0% |
| ! | ACTTCTAAGTTGCTTTGTAC+CGG | - | chr7.2:8276841-8276860 | MS.gene050319:intron | 35.0% |
| ! | AGAGGAAATGATGGAAACAA+GGG | + | chr7.2:8275630-8275649 | None:intergenic | 35.0% |
| ! | AGTTGGTTATTGGTTATTGC+CGG | - | chr7.2:8274810-8274829 | MS.gene050319:intron | 35.0% |
| ! | CTAATGTATGTTTTGCTTGC+AGG | - | chr7.2:8279257-8279276 | MS.gene050319:CDS | 35.0% |
| ! | GTTGACAACACCCAATTTTA+AGG | + | chr7.2:8277376-8277395 | None:intergenic | 35.0% |
| ! | TAAGTGTGGGAGATTTTACT+TGG | - | chr7.2:8274342-8274361 | MS.gene050319:intron | 35.0% |
| ! | TAGAGTGATTCTTGCTGTAA+CGG | - | chr7.2:8273995-8274014 | MS.gene050319:intron | 35.0% |
| ! | TAGTCTTTTGAGCTATGACA+AGG | + | chr7.2:8274777-8274796 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGTACCATTC+AGG | + | chr7.2:8278934-8278953 | None:intergenic | 35.0% |
| !! | AATCAAAAAGGTATCACCAG+CGG | + | chr7.2:8279233-8279252 | None:intergenic | 35.0% |
| !! | CCATTAATGATGCTATTTCC+AGG | - | chr7.2:8275871-8275890 | MS.gene050319:intron | 35.0% |
| !! | GCAAGGTATTTTTCAGAACT+TGG | - | chr7.2:8275421-8275440 | MS.gene050319:intron | 35.0% |
| !! | GGCTACTGAGGTATTTATTT+TGG | - | chr7.2:8278078-8278097 | MS.gene050319:CDS | 35.0% |
| !! | GGTTTTGGTGGTTTATTATG+TGG | - | chr7.2:8274016-8274035 | MS.gene050319:intron | 35.0% |
| !! | TAGCCAATAAACTTTTTGGG+TGG | + | chr7.2:8277600-8277619 | None:intergenic | 35.0% |
| !!! | ATTCAAGACTGGTGGTTTTT+TGG | - | chr7.2:8276665-8276684 | MS.gene050319:intron | 35.0% |
| !!! | GGTTATCTTCCTTCCTTTTT+TGG | - | chr7.2:8275892-8275911 | MS.gene050319:intron | 35.0% |
| !!! | GTTTGGGTGGTTTTGAATTT+AGG | + | chr7.2:8273746-8273765 | None:intergenic | 35.0% |
| !!! | TATCTTCCTTCCTTTTTTGG+GGG | - | chr7.2:8275895-8275914 | MS.gene050319:intron | 35.0% |
| !!! | TTCCTCCTGGTTTAGTTTTA+TGG | - | chr7.2:8275208-8275227 | MS.gene050319:intron | 35.0% |
| AACCACAGTGCATGAATATG+TGG | + | chr7.2:8277342-8277361 | None:intergenic | 40.0% | |
| AAGGAAATGGACATGGGAAA+TGG | + | chr7.2:8276382-8276401 | None:intergenic | 40.0% | |
| AAGGAGGAAATCTCCATTTG+TGG | + | chr7.2:8276643-8276662 | None:intergenic | 40.0% | |
| ACATGGAGGATACTACCTTT+AGG | + | chr7.2:8279117-8279136 | None:intergenic | 40.0% | |
| ACTGGGAACCTTGAATATTG+TGG | - | chr7.2:8274482-8274501 | MS.gene050319:intron | 40.0% | |
| AGCTATGACAAGGTAGATAG+AGG | + | chr7.2:8274767-8274786 | None:intergenic | 40.0% | |
| AGGATTATGCTCATTTGGGT+GGG | - | chr7.2:8274090-8274109 | MS.gene050319:intron | 40.0% | |
| AGGGTTCTTAGGTACTTACA+AGG | - | chr7.2:8277118-8277137 | MS.gene050319:intron | 40.0% | |
| AGTGAATCGGATTTGAGAAG+AGG | + | chr7.2:8273810-8273829 | None:intergenic | 40.0% | |
| ATATGCTAGCGTCCTTATAC+AGG | + | chr7.2:8276146-8276165 | None:intergenic | 40.0% | |
| ATGTTCGCAACGATGTATAC+GGG | - | chr7.2:8273898-8273917 | MS.gene050319:intron | 40.0% | |
| CAAAATCACTCTGATACCAC+TGG | - | chr7.2:8278713-8278732 | MS.gene050319:intron | 40.0% | |
| CAAACCTTAGCAACAAAGCT+TGG | + | chr7.2:8275020-8275039 | None:intergenic | 40.0% | |
| CCCTAGGAAACTATGACTTA+TGG | - | chr7.2:8277823-8277842 | MS.gene050319:intron | 40.0% | |
| CGATAATGTTAGACGGTTGA+TGG | - | chr7.2:8278057-8278076 | MS.gene050319:intron | 40.0% | |
| CTCTATGAAGAGCTATTGAG+TGG | + | chr7.2:8278232-8278251 | None:intergenic | 40.0% | |
| GACAGAGGAGAAATATCACA+TGG | + | chr7.2:8277955-8277974 | None:intergenic | 40.0% | |
| GCCGTCACATCAAAACAATA+AGG | + | chr7.2:8277776-8277795 | None:intergenic | 40.0% | |
| GTATATGTTTCTTCTGGTGG+AGG | - | chr7.2:8277239-8277258 | MS.gene050319:CDS | 40.0% | |
| TACATCGTTGCGAACATATG+CGG | + | chr7.2:8273895-8273914 | None:intergenic | 40.0% | |
| TATTACCATTGAGAGCAGCA+TGG | + | chr7.2:8279329-8279348 | None:intergenic | 40.0% | |
| TCAAAACCACCCAAACCAAA+CGG | - | chr7.2:8273750-8273769 | MS.gene050319:CDS | 40.0% | |
| TCCATCTATGAAGAGATCAG+TGG | - | chr7.2:8275135-8275154 | MS.gene050319:intron | 40.0% | |
| TCTCGGAGGAAAAATTTGTG+GGG | - | chr7.2:8277306-8277325 | MS.gene050319:intron | 40.0% | |
| TGGATAGCAAAAATGAGAGG+TGG | - | chr7.2:8274419-8274438 | MS.gene050319:intron | 40.0% | |
| TGTAAGTACCTAAGAACCCT+AGG | + | chr7.2:8277118-8277137 | None:intergenic | 40.0% | |
| TGTTACATCGCTTTGCTACA+AGG | + | chr7.2:8279171-8279190 | None:intergenic | 40.0% | |
| TTGGTTGCATCTATGTTCAG+CGG | - | chr7.2:8275485-8275504 | MS.gene050319:intron | 40.0% | |
| ! | AAAATTTGTGGGGTGCTTTG+AGG | - | chr7.2:8277316-8277335 | MS.gene050319:intron | 40.0% |
| ! | CAGAGGAAATGATGGAAACA+AGG | + | chr7.2:8275631-8275650 | None:intergenic | 40.0% |
| ! | GTGCACACACATTACTGTTT+TGG | - | chr7.2:8278889-8278908 | MS.gene050319:CDS | 40.0% |
| ! | TCTAGTTTCCTAGGGTTCTT+AGG | - | chr7.2:8277107-8277126 | MS.gene050319:intron | 40.0% |
| ! | TTTGAGTTCTGTAGTTCTCG+AGG | - | chr7.2:8275269-8275288 | MS.gene050319:intron | 40.0% |
| ! | TTTTGTAACAGCAAGTGCCT+TGG | - | chr7.2:8275466-8275485 | MS.gene050319:intron | 40.0% |
| !! | ATCTAAGGCATCGGATTTCA+AGG | - | chr7.2:8275510-8275529 | MS.gene050319:intron | 40.0% |
| !! | ATCTGCGATTGCTACTTTCT+CGG | - | chr7.2:8277289-8277308 | MS.gene050319:intron | 40.0% |
| !! | CGTTTGGAACTGTTCTTTTG+CGG | - | chr7.2:8278812-8278831 | MS.gene050319:intron | 40.0% |
| !! | GATTCTTGCTGTAACGGTTT+TGG | - | chr7.2:8274001-8274020 | MS.gene050319:intron | 40.0% |
| !! | GCTAAGGAGAAGCTTTTTCT+TGG | - | chr7.2:8273945-8273964 | MS.gene050319:intron | 40.0% |
| !! | GTTTGGAACTGTTCTTTTGC+GGG | - | chr7.2:8278813-8278832 | MS.gene050319:intron | 40.0% |
| !! | TCTAAGGCATCGGATTTCAA+GGG | - | chr7.2:8275511-8275530 | MS.gene050319:intron | 40.0% |
| !!! | ATCTTCCTTCCTTTTTTGGG+GGG | - | chr7.2:8275896-8275915 | MS.gene050319:intron | 40.0% |
| AAAAGACCAACATAGGGCAG+AGG | + | chr7.2:8275648-8275667 | None:intergenic | 45.0% | |
| AACCACCAGTCTTGAATGGA+AGG | + | chr7.2:8276662-8276681 | None:intergenic | 45.0% | |
| AACGATGTATACGGGACGAT+GGG | - | chr7.2:8273906-8273925 | MS.gene050319:intron | 45.0% | |
| AAGAGGAGAGTTAGGAGCTA+AGG | - | chr7.2:8273929-8273948 | MS.gene050319:intron | 45.0% | |
| ACATAGGGCAGAGGAAATGA+TGG | + | chr7.2:8275639-8275658 | None:intergenic | 45.0% | |
| AGCTGCAGGAAGAAAGTTCA+CGG | + | chr7.2:8275806-8275825 | None:intergenic | 45.0% | |
| AGGAAGAAAGTTCACGGGTT+AGG | + | chr7.2:8275800-8275819 | None:intergenic | 45.0% | |
| ATATGGCTGTGATGCTGTTG+TGG | - | chr7.2:8274519-8274538 | MS.gene050319:intron | 45.0% | |
| ATCATCCATTTCCTGCTGTG+AGG | + | chr7.2:8278023-8278042 | None:intergenic | 45.0% | |
| ATCTACCATGCTGCTCTCAA+TGG | - | chr7.2:8279321-8279340 | MS.gene050319:CDS | 45.0% | |
| ATGCGGCGAATTTCTTCTCT+AGG | + | chr7.2:8273878-8273897 | None:intergenic | 45.0% | |
| ATTATGCTCATTTGGGTGGG+TGG | - | chr7.2:8274093-8274112 | MS.gene050319:intron | 45.0% | |
| CAACAGCATCACAGCCATAT+TGG | + | chr7.2:8274519-8274538 | None:intergenic | 45.0% | |
| CTATGTTCAGCGGGAATCTA+AGG | - | chr7.2:8275495-8275514 | MS.gene050319:intron | 45.0% | |
| CTTATCCCACTAAGTGGGAT+CGG | - | chr7.2:8278960-8278979 | MS.gene050319:CDS | 45.0% | |
| GAGCTATTGAGTGGTGTATC+TGG | + | chr7.2:8278223-8278242 | None:intergenic | 45.0% | |
| GAGGATTATGCTCATTTGGG+TGG | - | chr7.2:8274089-8274108 | MS.gene050319:intron | 45.0% | |
| GCCACTGATCTCTTCATAGA+TGG | + | chr7.2:8275139-8275158 | None:intergenic | 45.0% | |
| GCTGAACATAGATGCAACCA+AGG | + | chr7.2:8275486-8275505 | None:intergenic | 45.0% | |
| TACTGTTATAGTGTGACCGC+TGG | - | chr7.2:8279214-8279233 | MS.gene050319:CDS | 45.0% | |
| TCATCCATTTCCTGCTGTGA+GGG | + | chr7.2:8278022-8278041 | None:intergenic | 45.0% | |
| TCATTTCCTCTGCCCTATGT+TGG | - | chr7.2:8275639-8275658 | MS.gene050319:intron | 45.0% | |
| TCTTTCGGACGCAAAACACT+AGG | + | chr7.2:8279360-8279379 | None:intergenic | 45.0% | |
| TGATACCACTGGAAAGTCTG+TGG | - | chr7.2:8278724-8278743 | MS.gene050319:intron | 45.0% | |
| TGCGCACTCTGTAACAATCA+TGG | - | chr7.2:8275561-8275580 | MS.gene050319:intron | 45.0% | |
| TGGACATGGGAAATGGACAT+AGG | + | chr7.2:8276375-8276394 | None:intergenic | 45.0% | |
| TGGCGAAATTAGGGCCAATA+TGG | - | chr7.2:8274502-8274521 | MS.gene050319:intron | 45.0% | |
| TGGTTGCATCTATGTTCAGC+GGG | - | chr7.2:8275486-8275505 | MS.gene050319:intron | 45.0% | |
| TTCCTCCTTCCATTCAAGAC+TGG | - | chr7.2:8276654-8276673 | MS.gene050319:intron | 45.0% | |
| TTGGCAAGCAGATGAACACA+AGG | + | chr7.2:8276287-8276306 | None:intergenic | 45.0% | |
| TTGGGCTCGAGTTCTCAAAT+TGG | - | chr7.2:8275977-8275996 | MS.gene050319:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7.2:8278955-8278974 | MS.gene050319:CDS | 45.0% |
| ! | GCAGAAGGTACAACCACAAA+TGG | - | chr7.2:8276627-8276646 | MS.gene050319:intron | 45.0% |
| ! | TTCCTCTTGTTGGTCTCATC+AGG | - | chr7.2:8275164-8275183 | MS.gene050319:intron | 45.0% |
| !! | AATTTAGCCTTGCTTCTGCG+TGG | - | chr7.2:8278569-8278588 | MS.gene050319:intron | 45.0% |
| !! | ATTTAGCCTTGCTTCTGCGT+GGG | - | chr7.2:8278570-8278589 | MS.gene050319:intron | 45.0% |
| !! | GTTCCCAAGCTTTGTTGCTA+AGG | - | chr7.2:8275013-8275032 | MS.gene050319:CDS | 45.0% |
| !! | TCGGATTTCAAGGGTGTTTC+AGG | - | chr7.2:8275520-8275539 | MS.gene050319:intron | 45.0% |
| !! | TCTTGCTGTAACGGTTTTGG+TGG | - | chr7.2:8274004-8274023 | MS.gene050319:intron | 45.0% |
| !!! | GACTGGTGGTTTTTTGGCAA+AGG | - | chr7.2:8276671-8276690 | MS.gene050319:intron | 45.0% |
| !! | TTTAATAAATAAGATAAAAT+AGG | + | chr7.2:8276252-8276271 | None:intergenic | 5.0% |
| AAGAGGACGATCGTCACGAA+CGG | + | chr7.2:8273793-8273812 | None:intergenic | 50.0% | |
| ACGATGGGAAGAGGAGAGTT+AGG | - | chr7.2:8273921-8273940 | MS.gene050319:intron | 50.0% | |
| AGCAACAAAGCTTGGGAACG+AGG | + | chr7.2:8275012-8275031 | None:intergenic | 50.0% | |
| CAACGATGTATACGGGACGA+TGG | - | chr7.2:8273905-8273924 | MS.gene050319:intron | 50.0% | |
| CAACGCTTTGGTTGCAGGAT+TGG | + | chr7.2:8277577-8277596 | None:intergenic | 50.0% | |
| CACCAGTCTTGAATGGAAGG+AGG | + | chr7.2:8276659-8276678 | None:intergenic | 50.0% | |
| CACCTGATGAGACCAACAAG+AGG | + | chr7.2:8275169-8275188 | None:intergenic | 50.0% | |
| CAGATATGGAATCCCAAGCG+GGG | + | chr7.2:8276743-8276762 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7.2:8278957-8278976 | None:intergenic | 50.0% | |
| CCAGATATGGAATCCCAAGC+GGG | + | chr7.2:8276744-8276763 | None:intergenic | 50.0% | |
| CCCAGATATGGAATCCCAAG+CGG | + | chr7.2:8276745-8276764 | None:intergenic | 50.0% | |
| CCGCTTGGGATTCCATATCT+GGG | - | chr7.2:8276742-8276761 | MS.gene050319:intron | 50.0% | |
| CGATCCCACTTAGTGGGATA+AGG | + | chr7.2:8278962-8278981 | None:intergenic | 50.0% | |
| CGCTTGGGATTCCATATCTG+GGG | - | chr7.2:8276743-8276762 | MS.gene050319:intron | 50.0% | |
| CGGGGCTAAATCTCTGGTAA+GGG | + | chr7.2:8276725-8276744 | None:intergenic | 50.0% | |
| CTATCCCTCACAGCAGGAAA+TGG | - | chr7.2:8278015-8278034 | MS.gene050319:intron | 50.0% | |
| CTCCTTCCATTCAAGACTGG+TGG | - | chr7.2:8276657-8276676 | MS.gene050319:intron | 50.0% | |
| CTGGTGGAGGATCAATGTCA+TGG | - | chr7.2:8277252-8277271 | MS.gene050319:CDS | 50.0% | |
| CTTTCAGTGACAACAGCTGC+AGG | + | chr7.2:8275820-8275839 | None:intergenic | 50.0% | |
| GCTGCAGGAAGAAAGTTCAC+GGG | + | chr7.2:8275805-8275824 | None:intergenic | 50.0% | |
| GGATCGGCAAACATCCTGAA+TGG | - | chr7.2:8278976-8278995 | MS.gene050319:CDS | 50.0% | |
| GGCCACATATTCATGCACTG+TGG | - | chr7.2:8277337-8277356 | MS.gene050319:intron | 50.0% | |
| GGGGGTCTCTTACCTGTATA+AGG | - | chr7.2:8276131-8276150 | MS.gene050319:intron | 50.0% | |
| GTCATCCACAGACTTTCCAG+TGG | + | chr7.2:8278732-8278751 | None:intergenic | 50.0% | |
| GTGGCTAAGCTTCCTCTTGT+TGG | - | chr7.2:8275154-8275173 | MS.gene050319:intron | 50.0% | |
| GTTTGCCGATCCCACTTAGT+GGG | + | chr7.2:8278968-8278987 | None:intergenic | 50.0% | |
| TGTTTGCCGATCCCACTTAG+TGG | + | chr7.2:8278969-8278988 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7.2:8278954-8278973 | MS.gene050319:CDS | 50.0% |
| ! | TCAGCGGGAATCTAAGGCAT+CGG | - | chr7.2:8275501-8275520 | MS.gene050319:intron | 50.0% |
| !! | GGTGGTGGAAGAGAGTGAAT+CGG | + | chr7.2:8273823-8273842 | None:intergenic | 50.0% |
| !! | TAGACGGTTGATGGCTACTG+AGG | - | chr7.2:8278066-8278085 | MS.gene050319:CDS | 50.0% |
| !! | TGCGATTGCTACTTTCTCGG+AGG | - | chr7.2:8277292-8277311 | MS.gene050319:intron | 50.0% |
| !! | TTTAGCCTTGCTTCTGCGTG+GGG | - | chr7.2:8278571-8278590 | MS.gene050319:intron | 50.0% |
| !!! | CTTTTTGGGTGGCAACGCTT+TGG | + | chr7.2:8277589-8277608 | None:intergenic | 50.0% |
| !!! | TCCTTCCTTTTTTGGGGGGT+GGG | - | chr7.2:8275900-8275919 | MS.gene050319:intron | 50.0% |
| !!! | TTCCTTCCTTTTTTGGGGGG+TGG | - | chr7.2:8275899-8275918 | MS.gene050319:intron | 50.0% |
| AAACCTCAGCCCGAAGAGAC+GGG | - | chr7.2:8274924-8274943 | MS.gene050319:intron | 55.0% | |
| ACCAGAGATTTAGCCCCGCT+TGG | - | chr7.2:8276727-8276746 | MS.gene050319:intron | 55.0% | |
| ACCAGGTCTTCCCGTCTCTT+CGG | + | chr7.2:8274937-8274956 | None:intergenic | 55.0% | |
| ACCCACCCCCCAAAAAAGGA+AGG | + | chr7.2:8275904-8275923 | None:intergenic | 55.0% | |
| ATGCTCATTTGGGTGGGTGG+AGG | - | chr7.2:8274096-8274115 | MS.gene050319:intron | 55.0% | |
| CAAACCTCAGCCCGAAGAGA+CGG | - | chr7.2:8274923-8274942 | MS.gene050319:intron | 55.0% | |
| CCAGAGATTTAGCCCCGCTT+GGG | - | chr7.2:8276728-8276747 | MS.gene050319:intron | 55.0% | |
| CCCGCTTGGGATTCCATATC+TGG | - | chr7.2:8276741-8276760 | MS.gene050319:intron | 55.0% | |
| GACGCAGTCGCGGTTATACT+GGG | - | chr7.2:8274465-8274484 | MS.gene050319:intron | 55.0% | |
| GCGGGGCTAAATCTCTGGTA+AGG | + | chr7.2:8276726-8276745 | None:intergenic | 55.0% | |
| GTATACGGGACGATGGGAAG+AGG | - | chr7.2:8273912-8273931 | MS.gene050319:intron | 55.0% | |
| TCGGACGCAAAACACTAGGC+AGG | + | chr7.2:8279356-8279375 | None:intergenic | 55.0% | |
| TGACGCAGTCGCGGTTATAC+TGG | - | chr7.2:8274464-8274483 | MS.gene050319:intron | 55.0% | |
| TTGTGGCTGCAATTGGGGCT+TGG | - | chr7.2:8274618-8274637 | MS.gene050319:intron | 55.0% | |
| ! | GCGGTGGTTCCGTTTGGTTT+GGG | + | chr7.2:8273762-8273781 | None:intergenic | 55.0% |
| ! | TGCGTTTGTTGACGCAGTCG+CGG | - | chr7.2:8274455-8274474 | MS.gene050319:intron | 55.0% |
| !! | GTGGTTCCGTTTGGTTTGGG+TGG | + | chr7.2:8273759-8273778 | None:intergenic | 55.0% |
| !!! | CTTTTTTGGGGGGTGGGTGT+GGG | - | chr7.2:8275906-8275925 | MS.gene050319:intron | 55.0% |
| !!! | TTTTTTGGGGGGTGGGTGTG+GGG | - | chr7.2:8275907-8275926 | MS.gene050319:intron | 55.0% |
| ACAAGCCCCACGCAGAAGCA+AGG | + | chr7.2:8278579-8278598 | None:intergenic | 60.0% | |
| ACGATCGTCACGAACGGTGG+CGG | + | chr7.2:8273787-8273806 | None:intergenic | 60.0% | |
| AGGACGATCGTCACGAACGG+TGG | + | chr7.2:8273790-8273809 | None:intergenic | 60.0% | |
| CACCACAACCATCACCACCG+CGG | - | chr7.2:8273839-8273858 | MS.gene050319:intron | 60.0% | |
| CCACACCCACCCCCCAAAAA+AGG | + | chr7.2:8275908-8275927 | None:intergenic | 60.0% | |
| CCAGGTCTTCCCGTCTCTTC+GGG | + | chr7.2:8274936-8274955 | None:intergenic | 60.0% | |
| CCCAAGCGGGGCTAAATCTC+TGG | + | chr7.2:8276731-8276750 | None:intergenic | 60.0% | |
| GGCGGTGGTTCCGTTTGGTT+TGG | + | chr7.2:8273763-8273782 | None:intergenic | 60.0% | |
| GGTGGCAACGCTTTGGTTGC+AGG | + | chr7.2:8277582-8277601 | None:intergenic | 60.0% | |
| ! | TAGGTCTTGTAGCTCCGCCG+CGG | + | chr7.2:8273859-8273878 | None:intergenic | 60.0% |
| !! | GGTGGTGATGGTTGTGGTGG+TGG | + | chr7.2:8273838-8273857 | None:intergenic | 60.0% |
| !!! | CCTTTTTTGGGGGGTGGGTG+TGG | - | chr7.2:8275905-8275924 | MS.gene050319:intron | 60.0% |
| CACAACCATCACCACCGCGG+CGG | - | chr7.2:8273842-8273861 | MS.gene050319:intron | 65.0% | |
| CCCGAAGAGACGGGAAGACC+TGG | - | chr7.2:8274933-8274952 | MS.gene050319:intron | 65.0% | |
| CTTCCCGTCTCTTCGGGCTG+AGG | + | chr7.2:8274930-8274949 | None:intergenic | 65.0% | |
| TGGGTGTGGGGTGGAGTGGA+GGG | - | chr7.2:8275919-8275938 | MS.gene050319:intron | 65.0% | |
| ! | ATCGTCACGAACGGTGGCGG+TGG | + | chr7.2:8273784-8273803 | None:intergenic | 65.0% |
| !! | CGCGGTGGTGATGGTTGTGG+TGG | + | chr7.2:8273841-8273860 | None:intergenic | 65.0% |
| GGGTGTGGGGTGGAGTGGAG+GGG | - | chr7.2:8275920-8275939 | MS.gene050319:intron | 70.0% | |
| GTCTTGTAGCTCCGCCGCGG+TGG | + | chr7.2:8273856-8273875 | None:intergenic | 70.0% | |
| GTGGGTGTGGGGTGGAGTGG+AGG | - | chr7.2:8275918-8275937 | MS.gene050319:intron | 70.0% | |
| TAGCTCCGCCGCGGTGGTGA+TGG | + | chr7.2:8273850-8273869 | None:intergenic | 70.0% | |
| TGGGGTGGAGTGGAGGGGTG+TGG | - | chr7.2:8275925-8275944 | MS.gene050319:intron | 70.0% | |
| TTTGGGGGGTGGGTGTGGGG+TGG | - | chr7.2:8275910-8275929 | MS.gene050319:intron | 70.0% | |
| ! | GCGGTGGCGGTGGTTCCGTT+TGG | + | chr7.2:8273768-8273787 | None:intergenic | 70.0% |
| ! | GTCACGAACGGTGGCGGTGG+CGG | + | chr7.2:8273781-8273800 | None:intergenic | 70.0% |
| !! | CGCCGCGGTGGTGATGGTTG+TGG | + | chr7.2:8273844-8273863 | None:intergenic | 70.0% |
| GGGGTGGGTGTGGGGTGGAG+TGG | - | chr7.2:8275915-8275934 | MS.gene050319:intron | 75.0% | |
| ! | ACGAACGGTGGCGGTGGCGG+TGG | + | chr7.2:8273778-8273797 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 8273711 | 8279386 | 8273711 | ID=MS.gene050319 |
| chr7.2 | mRNA | 8273711 | 8279386 | 8273711 | ID=MS.gene050319.t1;Parent=MS.gene050319 |
| chr7.2 | exon | 8278880 | 8279386 | 8278880 | ID=MS.gene050319.t1.exon1;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8278880 | 8279386 | 8278880 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8278063 | 8278179 | 8278063 | ID=MS.gene050319.t1.exon2;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8278063 | 8278179 | 8278063 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8277912 | 8277949 | 8277912 | ID=MS.gene050319.t1.exon3;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8277912 | 8277949 | 8277912 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8277556 | 8277620 | 8277556 | ID=MS.gene050319.t1.exon4;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8277556 | 8277620 | 8277556 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8277205 | 8277273 | 8277205 | ID=MS.gene050319.t1.exon5;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8277205 | 8277273 | 8277205 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8276333 | 8276466 | 8276333 | ID=MS.gene050319.t1.exon6;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8276333 | 8276466 | 8276333 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8275010 | 8275150 | 8275010 | ID=MS.gene050319.t1.exon7;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8275010 | 8275150 | 8275010 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| chr7.2 | exon | 8273711 | 8273818 | 8273711 | ID=MS.gene050319.t1.exon8;Parent=MS.gene050319.t1 |
| chr7.2 | CDS | 8273711 | 8273818 | 8273711 | ID=cds.MS.gene050319.t1;Parent=MS.gene050319.t1 |
| Gene Sequence |
| Protein sequence |
