Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89779.t1 | XP_003604737.1 | 98.5 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.00E+00 | 1214.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89779.t1 | Q9M040 | 83.2 | 608 | 96 | 3 | 1 | 607 | 1 | 603 | 2.5e-301 | 1035.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89779.t1 | G7JQ58 | 98.5 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.0e+00 | 1214.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013678 | MS.gene89779 | PPI |
| MS.gene81954 | MS.gene89779 | PPI |
| MS.gene064505 | MS.gene89779 | PPI |
| MS.gene81957 | MS.gene89779 | PPI |
| MS.gene26127 | MS.gene89779 | PPI |
| MS.gene81956 | MS.gene89779 | PPI |
| MS.gene89779 | MS.gene02654 | PPI |
| MS.gene89779 | MS.gene02651 | PPI |
| MS.gene02655 | MS.gene89779 | PPI |
| MS.gene89779 | MS.gene013671 | PPI |
| MS.gene89779 | MS.gene02488 | PPI |
| MS.gene89779 | MS.gene017382 | PPI |
| MS.gene33522 | MS.gene89779 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89779.t1 | MTR_4g017200 | 98.517 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1242 |
| MS.gene89779.t1 | MTR_5g046610 | 98.353 | 607 | 10 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1239 |
| MS.gene89779.t1 | MTR_7g069540 | 85.197 | 608 | 86 | 3 | 1 | 607 | 1 | 605 | 0.0 | 1061 |
| MS.gene89779.t1 | MTR_7g069500 | 82.043 | 607 | 77 | 5 | 1 | 607 | 1 | 575 | 0.0 | 1003 |
| MS.gene89779.t1 | MTR_2g015560 | 79.094 | 574 | 120 | 0 | 34 | 607 | 9 | 582 | 0.0 | 962 |
| MS.gene89779.t1 | MTR_2g009330 | 69.258 | 566 | 173 | 1 | 40 | 604 | 44 | 609 | 0.0 | 865 |
| MS.gene89779.t1 | MTR_5g046620 | 54.545 | 242 | 31 | 4 | 237 | 476 | 1 | 165 | 2.98e-73 | 232 |
| MS.gene89779.t1 | MTR_3g099190 | 24.227 | 582 | 369 | 21 | 22 | 563 | 58 | 607 | 8.37e-22 | 100 |
| MS.gene89779.t1 | MTR_1g011530 | 68.421 | 57 | 15 | 1 | 353 | 409 | 31 | 84 | 4.28e-21 | 89.0 |
| MS.gene89779.t1 | MTR_2g027220 | 22.563 | 554 | 382 | 15 | 40 | 563 | 55 | 591 | 2.09e-18 | 89.4 |
| MS.gene89779.t1 | MTR_2g013120 | 22.332 | 506 | 353 | 15 | 51 | 535 | 88 | 574 | 1.72e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89779.t1 | AT5G01320 | 83.031 | 607 | 99 | 2 | 1 | 607 | 1 | 603 | 0.0 | 1061 |
| MS.gene89779.t1 | AT4G33070 | 82.102 | 609 | 105 | 4 | 1 | 607 | 1 | 607 | 0.0 | 1050 |
| MS.gene89779.t1 | AT5G54960 | 81.773 | 609 | 107 | 2 | 1 | 607 | 1 | 607 | 0.0 | 1046 |
| MS.gene89779.t1 | AT5G01330 | 82.799 | 593 | 98 | 3 | 17 | 607 | 2 | 592 | 0.0 | 1021 |
| MS.gene89779.t1 | AT5G17380 | 22.835 | 508 | 308 | 18 | 51 | 513 | 18 | 486 | 9.70e-18 | 87.4 |
| MS.gene89779.t1 | AT3G48560 | 21.875 | 512 | 348 | 14 | 51 | 535 | 103 | 589 | 5.54e-15 | 79.0 |
Find 152 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTCATTGGAACATTT+TGG | 0.082189 | 4.4:-83626527 | MS.gene89779:CDS |
| GGGCCTAATTCTAATGATTT+TGG | 0.114847 | 4.4:-83627838 | MS.gene89779:CDS |
| TACTTTGGAGACAAGGAAAA+TGG | 0.246632 | 4.4:+83626837 | None:intergenic |
| CTGCATATGAGAATTATTTC+AGG | 0.273412 | 4.4:-83626269 | MS.gene89779:CDS |
| CGATTATTGTTCAGCCTGAT+AGG | 0.276114 | 4.4:-83626380 | MS.gene89779:CDS |
| CATTGGTGATGGAAGTTTCC+AGG | 0.279678 | 4.4:-83625711 | MS.gene89779:intron |
| AAGCATAAGCAATCTTTCTT+TGG | 0.284489 | 4.4:+83625157 | None:intergenic |
| TCTGAAGTTCACTGAGGATT+TGG | 0.287893 | 4.4:+83625049 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.294152 | 4.4:-83627808 | MS.gene89779:CDS |
| GTCCCAAAATCATTAGAATT+AGG | 0.303299 | 4.4:+83627835 | None:intergenic |
| CAAAAGATTAATTACCTTAG+TGG | 0.314883 | 4.4:+83625384 | None:intergenic |
| CAGCTTATGCTTATGTAAAC+AGG | 0.328846 | 4.4:+83626906 | None:intergenic |
| TGAAAATAGGTCCAGCAAAT+AGG | 0.336734 | 4.4:+83626451 | None:intergenic |
| GCTTTCGCTACTCTTAGTTT+TGG | 0.343206 | 4.4:+83626639 | None:intergenic |
| TGGTTATGCTCAAGCTGTTC+CGG | 0.343868 | 4.4:-83625753 | MS.gene89779:CDS |
| ATTACTTACCCACATCCTTT+TGG | 0.345387 | 4.4:+83626090 | None:intergenic |
| GATTTCAAAGGCAAACCTTC+AGG | 0.356531 | 4.4:+83626237 | None:intergenic |
| TCTCCAATCACAACCCTATC+AGG | 0.360164 | 4.4:+83626366 | None:intergenic |
| TATGAGTTCCAGATGCAATA+TGG | 0.362998 | 4.4:-83625806 | MS.gene89779:CDS |
| CAGATGCAATATGGTTCAAT+TGG | 0.366605 | 4.4:-83625797 | MS.gene89779:CDS |
| GAGGATCACAAACATTTCAT+TGG | 0.372783 | 4.4:-83626537 | MS.gene89779:CDS |
| ATGCAGTATTGTTCCTCTTA+AGG | 0.374225 | 4.4:+83626286 | None:intergenic |
| CAGTTCTTAATCACATTGTA+TGG | 0.381671 | 4.4:+83625460 | None:intergenic |
| GAACTGTAATCATTGAAAAT+AGG | 0.384366 | 4.4:+83626438 | None:intergenic |
| CGCTCGCGAAGCGCCTTAAG+AGG | 0.395552 | 4.4:-83626299 | MS.gene89779:CDS |
| GCTGATGCATACCTATTTGC+TGG | 0.395610 | 4.4:-83626462 | MS.gene89779:CDS |
| GAAGCTAGGGATTGGGTTGA+AGG | 0.395680 | 4.4:+83628159 | None:intergenic |
| ATTGGAGATGGTCCTACATT+TGG | 0.399314 | 4.4:-83626351 | MS.gene89779:CDS |
| CTGATGGTTATGCAAGGTCT+AGG | 0.408121 | 4.4:-83627966 | MS.gene89779:CDS |
| CTGAACCTAGAGAGCCTTTG+AGG | 0.417588 | 4.4:-83626215 | MS.gene89779:CDS |
| AGCGTGATTAATGCTATTGC+TGG | 0.421910 | 4.4:-83627901 | MS.gene89779:CDS |
| CAATTGAACCATATTGCATC+TGG | 0.423310 | 4.4:+83625798 | None:intergenic |
| TCTGGAAACACCTAAGTTCC+TGG | 0.424227 | 4.4:+83627770 | None:intergenic |
| GGCTACTAGTACTGGTTTCA+CGG | 0.424604 | 4.4:+83626665 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+CGG | 0.431538 | 4.4:+83625734 | None:intergenic |
| ATCATGGATTTCAACTTCAA+TGG | 0.433034 | 4.4:+83625486 | None:intergenic |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4.4:-83625104 | MS.gene89779:CDS |
| GAAGCAATTCAGACAGCAAC+AGG | 0.436338 | 4.4:-83625181 | MS.gene89779:CDS |
| TTCAGATGAAGCTAGGGATT+GGG | 0.437372 | 4.4:+83628152 | None:intergenic |
| CCCGGGGACGGTGAAAATAT+CGG | 0.443016 | 4.4:+83628080 | None:intergenic |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4.4:-83625096 | MS.gene89779:CDS |
| CTGAAATTGCCAAAAGGATG+TGG | 0.445246 | 4.4:-83626099 | MS.gene89779:CDS |
| TTCAATGATTACAGTTCTGT+TGG | 0.449416 | 4.4:-83626432 | MS.gene89779:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4.4:-83625105 | MS.gene89779:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.454455 | 4.4:-83625773 | MS.gene89779:CDS |
| TTGTGCCGAGATTGTGGAAT+CGG | 0.455522 | 4.4:-83626484 | MS.gene89779:CDS |
| TGATGGTTATGCAAGGTCTA+GGG | 0.455953 | 4.4:-83627965 | MS.gene89779:CDS |
| CTAAGTTCCTGGCTAAAATC+AGG | 0.456762 | 4.4:+83627781 | None:intergenic |
| TTACCAGTGATTTGTATTGT+TGG | 0.457463 | 4.4:-83627862 | MS.gene89779:CDS |
| ATTCAGATGAAGCTAGGGAT+TGG | 0.458364 | 4.4:+83628151 | None:intergenic |
| ACTGCTGTTATTGCCGAGAC+AGG | 0.459219 | 4.4:-83626147 | MS.gene89779:CDS |
| GGAGACAAGGAAAATGGAAC+AGG | 0.460250 | 4.4:+83626843 | None:intergenic |
| GGCAGCAGTGGAAGCAGCTG+CGG | 0.462599 | 4.4:-83626703 | MS.gene89779:CDS |
| CCAGACTGTTACTTGCTACC+AGG | 0.464384 | 4.4:-83627752 | MS.gene89779:intron |
| GAACTGGAATTACACTGGCT+TGG | 0.471453 | 4.4:-83625443 | MS.gene89779:CDS |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4.4:-83625134 | MS.gene89779:CDS |
| ATGAAATGTTTGTGATCCTC+AGG | 0.472515 | 4.4:+83626540 | None:intergenic |
| ATTGTTAATCAAGAAGATTA+TGG | 0.473966 | 4.4:+83625519 | None:intergenic |
| TTATGCAAGGTCTAGGGGTG+TGG | 0.478805 | 4.4:-83627959 | MS.gene89779:CDS |
| TTTGGACCGGCTACTAGTAC+TGG | 0.479924 | 4.4:+83626657 | None:intergenic |
| TGCTGTAACGAACTGAATGC+TGG | 0.480708 | 4.4:-83627997 | MS.gene89779:CDS |
| TATGCAAGGTCTAGGGGTGT+GGG | 0.481246 | 4.4:-83627958 | MS.gene89779:CDS |
| CATACAATGTGATTAAGAAC+TGG | 0.481258 | 4.4:-83625459 | MS.gene89779:CDS |
| GTTGTTACATTTACTGTTGG+TGG | 0.484847 | 4.4:-83627928 | MS.gene89779:CDS |
| TTAACCCTCAAAGGCTCTCT+AGG | 0.484853 | 4.4:+83626210 | None:intergenic |
| TTGTTACATTTACTGTTGGT+GGG | 0.485744 | 4.4:-83627927 | MS.gene89779:CDS |
| CAAGGTAAGGTTGAAGTCCC+CGG | 0.486027 | 4.4:+83628062 | None:intergenic |
| ATTGAGTAATCCAATGGGAT+TGG | 0.486444 | 4.4:-83626727 | MS.gene89779:CDS |
| ACTGCTGCCTCCAATCCCAT+TGG | 0.487915 | 4.4:+83626717 | None:intergenic |
| CCTGGTAGCAAGTAACAGTC+TGG | 0.488780 | 4.4:+83627752 | None:intergenic |
| GAAGTTCACTGAGGATTTGG+AGG | 0.489308 | 4.4:+83625052 | None:intergenic |
| CAGTGATTTGTATTGTTGGT+GGG | 0.495308 | 4.4:-83627858 | MS.gene89779:CDS |
| AAGCTAGGGATTGGGTTGAA+GGG | 0.497192 | 4.4:+83628160 | None:intergenic |
| TCACATTGTATGGTCCATCA+TGG | 0.497871 | 4.4:+83625470 | None:intergenic |
| ACAATGGTCAAGGAAATTGC+TGG | 0.500572 | 4.4:-83625408 | MS.gene89779:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.502043 | 4.4:-83625793 | MS.gene89779:CDS |
| CCAGTGATTTGTATTGTTGG+TGG | 0.502339 | 4.4:-83627859 | MS.gene89779:CDS |
| CAGCCTGATAGGGTTGTGAT+TGG | 0.505425 | 4.4:-83626369 | MS.gene89779:CDS |
| AGCAATTTCCTTGACCATTG+TGG | 0.508734 | 4.4:+83625410 | None:intergenic |
| GCCGTGCTAGGTGACTTCCT+AGG | 0.509412 | 4.4:+83628124 | None:intergenic |
| GCAGATGGCATGACAGAATA+CGG | 0.509599 | 4.4:+83626576 | None:intergenic |
| GGGTTGATTCAGATGAAGCT+AGG | 0.509627 | 4.4:+83628145 | None:intergenic |
| TCTGTCATGCCATCTGCTAA+AGG | 0.510996 | 4.4:-83626570 | MS.gene89779:CDS |
| TGCATGATTCGAGGGATCCT+AGG | 0.513172 | 4.4:+83628250 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 4.4:-83625785 | MS.gene89779:CDS |
| CCGTGCTAGGTGACTTCCTA+GGG | 0.516328 | 4.4:+83628125 | None:intergenic |
| AAGGTAAGGTTGAAGTCCCC+GGG | 0.518385 | 4.4:+83628063 | None:intergenic |
| ACAGGTTCGCGACTGAAAGT+AGG | 0.519422 | 4.4:+83626861 | None:intergenic |
| TGAACCTAGAGAGCCTTTGA+GGG | 0.523049 | 4.4:-83626214 | MS.gene89779:CDS |
| TGACAGATTGAGTAATCCAA+TGG | 0.525959 | 4.4:-83626733 | MS.gene89779:intron |
| TTGCCGAGACAGGGGACTCA+TGG | 0.526361 | 4.4:-83626137 | MS.gene89779:CDS |
| GATTATTGTTCAGCCTGATA+GGG | 0.526387 | 4.4:-83626379 | MS.gene89779:CDS |
| GACAGATTGAGTAATCCAAT+GGG | 0.528687 | 4.4:-83626732 | MS.gene89779:intron |
| CGCGATCAGGTGGTCGAGCA+AGG | 0.528842 | 4.4:+83628044 | None:intergenic |
| ATAACAACACCTTCATCAAA+CGG | 0.529906 | 4.4:-83628207 | MS.gene89779:CDS |
| TGTGTTGTTACATTTACTGT+TGG | 0.530399 | 4.4:-83627931 | MS.gene89779:CDS |
| AGCTAGGGATTGGGTTGAAG+GGG | 0.531081 | 4.4:+83628161 | None:intergenic |
| CTTCCACTAGTCGCCGTGCT+AGG | 0.532807 | 4.4:+83628112 | None:intergenic |
| AGGAAATTGCTGGACCACTA+AGG | 0.533010 | 4.4:-83625398 | MS.gene89779:intron |
| ATAGGCTGTGGTCAACAACT+TGG | 0.534954 | 4.4:-83626985 | MS.gene89779:intron |
| GAGTAATCCAATGGGATTGG+AGG | 0.536971 | 4.4:-83626724 | MS.gene89779:CDS |
| CAAAAGCTGAAATTGCCAAA+AGG | 0.537401 | 4.4:-83626105 | MS.gene89779:CDS |
| GGAATTAGTCCTTTAGCAGA+TGG | 0.539613 | 4.4:+83626561 | None:intergenic |
| CAGGTTCGCGACTGAAAGTA+GGG | 0.539662 | 4.4:+83626862 | None:intergenic |
| ATCTTCTTGATTAACAATGG+TGG | 0.543934 | 4.4:-83625514 | MS.gene89779:CDS |
| ATCAGCCGATTCCACAATCT+CGG | 0.548115 | 4.4:+83626479 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 4.4:-83625722 | MS.gene89779:CDS |
| AAAAGAACATTAACCCTCAA+AGG | 0.553752 | 4.4:+83626201 | None:intergenic |
| AATGGGATTGGAGGCAGCAG+TGG | 0.555789 | 4.4:-83626715 | MS.gene89779:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4.4:-83625095 | MS.gene89779:CDS |
| TCACCTAGCACGGCGACTAG+TGG | 0.559417 | 4.4:-83628115 | MS.gene89779:CDS |
| GGTTGATTCAGATGAAGCTA+GGG | 0.561038 | 4.4:+83628146 | None:intergenic |
| CCCTAGGAAGTCACCTAGCA+CGG | 0.561934 | 4.4:-83628125 | MS.gene89779:CDS |
| AAACCATGAGTCCCCTGTCT+CGG | 0.564220 | 4.4:+83626134 | None:intergenic |
| GATAGGGTTGTGATTGGAGA+TGG | 0.564456 | 4.4:-83626363 | MS.gene89779:CDS |
| CTGCTGTTATTGCCGAGACA+GGG | 0.566446 | 4.4:-83626146 | MS.gene89779:CDS |
| ATGGTGATTTGCATGATTCG+AGG | 0.568880 | 4.4:+83628241 | None:intergenic |
| TCAGGTGGTCGAGCAAGGTA+AGG | 0.569126 | 4.4:+83628049 | None:intergenic |
| AAGGTTGAAGTCCCCGGGGA+CGG | 0.569214 | 4.4:+83628068 | None:intergenic |
| ATTGAAGTTGAAATCCATGA+TGG | 0.569661 | 4.4:-83625484 | MS.gene89779:CDS |
| ATCAAAACACATCCAAATGT+AGG | 0.572453 | 4.4:+83626339 | None:intergenic |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.574293 | 4.4:-83625728 | MS.gene89779:CDS |
| AGATTGCTTATGCTTCATTG+AGG | 0.577157 | 4.4:-83625149 | MS.gene89779:CDS |
| GATGCTATCCACAATGGTCA+AGG | 0.577985 | 4.4:-83625418 | MS.gene89779:CDS |
| GAAACAGTGCCGTTTGATGA+AGG | 0.578220 | 4.4:+83628198 | None:intergenic |
| ATAATCTTCTTGATTAACAA+TGG | 0.579911 | 4.4:-83625517 | MS.gene89779:CDS |
| GTTGTTATTATGTCGTTGCA+TGG | 0.581178 | 4.4:+83628222 | None:intergenic |
| CCACCAACAATACAAATCAC+TGG | 0.587155 | 4.4:+83627859 | None:intergenic |
| GCTTCATCTGAATCAACCCT+AGG | 0.588476 | 4.4:-83628141 | MS.gene89779:CDS |
| ATTAAGAACTGGAATTACAC+TGG | 0.592024 | 4.4:-83625448 | MS.gene89779:CDS |
| TGGTGATTTGCATGATTCGA+GGG | 0.596910 | 4.4:+83628242 | None:intergenic |
| ACTGAAAGTAGGGTGAGGAA+TGG | 0.602836 | 4.4:+83626872 | None:intergenic |
| TCTCTAGGTTCAGATTTCAA+AGG | 0.609595 | 4.4:+83626225 | None:intergenic |
| AAAATCTTACTTTGGAGACA+AGG | 0.611605 | 4.4:+83626830 | None:intergenic |
| TGCTGTTATTGCCGAGACAG+GGG | 0.619008 | 4.4:-83626145 | MS.gene89779:CDS |
| TTCAACATGGACACAAACCT+AGG | 0.622509 | 4.4:-83628267 | None:intergenic |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4.4:-83625103 | MS.gene89779:CDS |
| TTATATGTAGGTCACAGCAC+AGG | 0.624396 | 4.4:-83625575 | MS.gene89779:intron |
| CTGTCCGCATCTCAGCATTG+TGG | 0.625156 | 4.4:+83625546 | None:intergenic |
| GATGGTTATGCAAGGTCTAG+GGG | 0.628881 | 4.4:-83627964 | MS.gene89779:CDS |
| TCGCGACTGAAAGTAGGGTG+AGG | 0.630951 | 4.4:+83626867 | None:intergenic |
| TGAAATTGCCAAAAGGATGT+GGG | 0.632720 | 4.4:-83626098 | MS.gene89779:intron |
| AATGCTGGATATGCTGCTGA+TGG | 0.647114 | 4.4:-83627982 | MS.gene89779:CDS |
| GTGAAACCAGTACTAGTAGC+CGG | 0.648867 | 4.4:-83626663 | MS.gene89779:CDS |
| ATGCTGCTGATGGTTATGCA+AGG | 0.654095 | 4.4:-83627972 | MS.gene89779:CDS |
| TGCTAAAGGACTAATTCCTG+AGG | 0.659904 | 4.4:-83626556 | MS.gene89779:CDS |
| CTTGCTCGACCACCTGATCG+CGG | 0.669820 | 4.4:-83628043 | MS.gene89779:CDS |
| GTTTCCACAATGCTGAGATG+CGG | 0.673317 | 4.4:-83625550 | MS.gene89779:CDS |
| TAAATTTCTGAAGTTCACTG+AGG | 0.695310 | 4.4:+83625043 | None:intergenic |
| TTGGTTGATGCTATCCACAA+TGG | 0.702445 | 4.4:-83625424 | MS.gene89779:CDS |
| GCACGGCGACTAGTGGAAGT+CGG | 0.702782 | 4.4:-83628108 | MS.gene89779:CDS |
| AGGTAAGGTTGAAGTCCCCG+GGG | 0.762921 | 4.4:+83628064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAATAAAAAT+AGG | + | chr4.4:83625618-83625637 | None:intergenic | 0.0% |
| !!! | ATTTTTATTTTTTTATTTTT+AGG | - | chr4.4:83625618-83625637 | MS.gene89779:intron | 0.0% |
| !! | AAAAATATAATAACATAACA+AGG | + | chr4.4:83627456-83627475 | None:intergenic | 10.0% |
| !! | ATAGTATTATAATATATGAT+TGG | - | chr4.4:83625986-83626005 | MS.gene89779:intron | 10.0% |
| !! | TAATCAAATATACAAATTAA+TGG | + | chr4.4:83628087-83628106 | None:intergenic | 10.0% |
| !! | TATTATTGTAATATTACAAT+TGG | - | chr4.4:83625953-83625972 | MS.gene89779:intron | 10.0% |
| !! | TTATAAAACTATTATTATCA+GGG | + | chr4.4:83625739-83625758 | None:intergenic | 10.0% |
| !! | TTTATAAAACTATTATTATC+AGG | + | chr4.4:83625740-83625759 | None:intergenic | 10.0% |
| !!! | AATTTTAAAAAAAAACTTAG+AGG | + | chr4.4:83627725-83627744 | None:intergenic | 10.0% |
| !!! | TTAATTTGTATATTTGATTA+TGG | - | chr4.4:83628087-83628106 | MS.gene89779:CDS | 10.0% |
| !! | TTTCAAATCTTATAAGTAAA+AGG | + | chr4.4:83625690-83625709 | None:intergenic | 15.0% |
| !!! | AGTAAAAATCAATATTTTCA+AGG | - | chr4.4:83626087-83626106 | MS.gene89779:intron | 15.0% |
| !!! | TATAAAAAGTTTTCAAGTAT+AGG | - | chr4.4:83625874-83625893 | MS.gene89779:intron | 15.0% |
| !! | AAAAATGTACTTGCAAAATT+TGG | + | chr4.4:83627701-83627720 | None:intergenic | 20.0% |
| !! | AATCTGTCAAAAGTTATTAT+TGG | + | chr4.4:83626574-83626593 | None:intergenic | 20.0% |
| !! | ATAATCTTCTTGATTAACAA+TGG | - | chr4.4:83627801-83627820 | MS.gene89779:CDS | 20.0% |
| !! | ATTGTTAATCAAGAAGATTA+TGG | + | chr4.4:83627802-83627821 | None:intergenic | 20.0% |
| !! | TAATGAGTAAAATCTTACTT+TGG | + | chr4.4:83626499-83626518 | None:intergenic | 20.0% |
| !! | TTTGTATATTTGATTATGGT+AGG | - | chr4.4:83628091-83628110 | MS.gene89779:CDS | 20.0% |
| !!! | AAATCAGATTTTGAAAAGAA+AGG | + | chr4.4:83626252-83626271 | None:intergenic | 20.0% |
| !!! | ATATGATTGCTTAATTTGAA+TGG | - | chr4.4:83626147-83626166 | MS.gene89779:CDS | 20.0% |
| !!! | ATATGATTTGGTTTACTATT+TGG | - | chr4.4:83626198-83626217 | MS.gene89779:CDS | 20.0% |
| !!! | TAGAATTTGATTTTTGGTAT+TGG | - | chr4.4:83627257-83627276 | MS.gene89779:intron | 20.0% |
| !!! | TTTTAATTTCATCTTTGACT+TGG | - | chr4.4:83626541-83626560 | MS.gene89779:CDS | 20.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | - | chr4.4:83625510-83625529 | MS.gene89779:CDS | 25.0% |
| ! | ATGTATTATTGTTGTGTTGT+TGG | - | chr4.4:83625789-83625808 | MS.gene89779:CDS | 25.0% |
| ! | ATTGATTGACTGTGTTAAAA+TGG | - | chr4.4:83626288-83626307 | MS.gene89779:CDS | 25.0% |
| ! | CAAAAGATTAATTACCTTAG+TGG | + | chr4.4:83627937-83627956 | None:intergenic | 25.0% |
| ! | GAACTGTAATCATTGAAAAT+AGG | + | chr4.4:83626883-83626902 | None:intergenic | 25.0% |
| ! | TAAAATGGCTTATATGTACT+TGG | - | chr4.4:83626303-83626322 | MS.gene89779:CDS | 25.0% |
| ! | TATGCTTTCTTGATATGATT+TGG | - | chr4.4:83626186-83626205 | MS.gene89779:CDS | 25.0% |
| ! | TTTCATACCTATAATAGCTA+AGG | + | chr4.4:83625644-83625663 | None:intergenic | 25.0% |
| ! | TTTCATATTTAACAACAGTG+AGG | + | chr4.4:83627987-83628006 | None:intergenic | 25.0% |
| ! | TTTGAAAAAAATAGTGACAC+TGG | - | chr4.4:83625703-83625722 | MS.gene89779:intron | 25.0% |
| !! | AACATTTCATTGGAACATTT+TGG | - | chr4.4:83626791-83626810 | MS.gene89779:intron | 25.0% |
| !! | ACATTTCATTGGAACATTTT+GGG | - | chr4.4:83626792-83626811 | MS.gene89779:intron | 25.0% |
| !! | TATGTACTTGGTTTGATTAT+AGG | - | chr4.4:83626315-83626334 | MS.gene89779:CDS | 25.0% |
| !!! | AAAGTTTTCAAGTATAGGTT+CGG | - | chr4.4:83625879-83625898 | MS.gene89779:intron | 25.0% |
| !!! | AGCTTCTAGAATTTGATTTT+TGG | - | chr4.4:83627251-83627270 | MS.gene89779:intron | 25.0% |
| AAAAGAACATTAACCCTCAA+AGG | + | chr4.4:83627120-83627139 | None:intergenic | 30.0% | |
| AAGCATAAGCAATCTTTCTT+TGG | + | chr4.4:83628164-83628183 | None:intergenic | 30.0% | |
| ATAACAACACCTTCATCAAA+CGG | - | chr4.4:83625111-83625130 | MS.gene89779:CDS | 30.0% | |
| ATCAAAACACATCCAAATGT+AGG | + | chr4.4:83626982-83627001 | None:intergenic | 30.0% | |
| ATCATGGATTTCAACTTCAA+TGG | + | chr4.4:83627835-83627854 | None:intergenic | 30.0% | |
| ATCTTCTTGATTAACAATGG+TGG | - | chr4.4:83627804-83627823 | MS.gene89779:CDS | 30.0% | |
| ATTAAGAACTGGAATTACAC+TGG | - | chr4.4:83627870-83627889 | MS.gene89779:CDS | 30.0% | |
| ATTGAAGTTGAAATCCATGA+TGG | - | chr4.4:83627834-83627853 | MS.gene89779:CDS | 30.0% | |
| CAGTTCTTAATCACATTGTA+TGG | + | chr4.4:83627861-83627880 | None:intergenic | 30.0% | |
| CATACAATGTGATTAAGAAC+TGG | - | chr4.4:83627859-83627878 | MS.gene89779:CDS | 30.0% | |
| CTGCATATGAGAATTATTTC+AGG | - | chr4.4:83627049-83627068 | MS.gene89779:intron | 30.0% | |
| GTCCCAAAATCATTAGAATT+AGG | + | chr4.4:83625486-83625505 | None:intergenic | 30.0% | |
| TGCATTTAACTACAATTCTC+TGG | + | chr4.4:83627327-83627346 | None:intergenic | 30.0% | |
| TTCAATGATTACAGTTCTGT+TGG | - | chr4.4:83626886-83626905 | MS.gene89779:CDS | 30.0% | |
| TTGTTACATTTACTGTTGGT+GGG | - | chr4.4:83625391-83625410 | MS.gene89779:intron | 30.0% | |
| ! | AAAATCTTACTTTGGAGACA+AGG | + | chr4.4:83626491-83626510 | None:intergenic | 30.0% |
| ! | ATTTTCATATGATGTGTTGG+TGG | - | chr4.4:83628045-83628064 | MS.gene89779:CDS | 30.0% |
| ! | CACATTTTCATATGATGTGT+TGG | - | chr4.4:83628042-83628061 | MS.gene89779:CDS | 30.0% |
| ! | CATTTCATTGGAACATTTTG+GGG | - | chr4.4:83626793-83626812 | MS.gene89779:intron | 30.0% |
| ! | GGCCTAATTCTAATGATTTT+GGG | - | chr4.4:83625481-83625500 | MS.gene89779:CDS | 30.0% |
| ! | TGTGTTGTTACATTTACTGT+TGG | - | chr4.4:83625387-83625406 | MS.gene89779:intron | 30.0% |
| ! | TTACCAGTGATTTGTATTGT+TGG | - | chr4.4:83625456-83625475 | MS.gene89779:CDS | 30.0% |
| ! | TTTTAGGCCTTAGCTATTAT+AGG | - | chr4.4:83625634-83625653 | MS.gene89779:intron | 30.0% |
| !! | AGAAAGCATAGCTTTTCAAA+TGG | + | chr4.4:83626176-83626195 | None:intergenic | 30.0% |
| !!! | ATTTGGATGTGTTTTGATGA+AGG | - | chr4.4:83626984-83627003 | MS.gene89779:CDS | 30.0% |
| AAAAATAGTGACACTGGCAT+AGG | - | chr4.4:83625709-83625728 | MS.gene89779:intron | 35.0% | |
| AGATTGCTTATGCTTCATTG+AGG | - | chr4.4:83628169-83628188 | MS.gene89779:CDS | 35.0% | |
| ATGAAATGTTTGTGATCCTC+AGG | + | chr4.4:83626781-83626800 | None:intergenic | 35.0% | |
| ATGCAGTATTGTTCCTCTTA+AGG | + | chr4.4:83627035-83627054 | None:intergenic | 35.0% | |
| ATTGAGTAATCCAATGGGAT+TGG | - | chr4.4:83626591-83626610 | MS.gene89779:CDS | 35.0% | |
| CAAAAGCTGAAATTGCCAAA+AGG | - | chr4.4:83627213-83627232 | MS.gene89779:intron | 35.0% | |
| CAATTGAACCATATTGCATC+TGG | + | chr4.4:83627523-83627542 | None:intergenic | 35.0% | |
| CAGATGCAATATGGTTCAAT+TGG | - | chr4.4:83627521-83627540 | MS.gene89779:intron | 35.0% | |
| CAGCTTATGCTTATGTAAAC+AGG | + | chr4.4:83626415-83626434 | None:intergenic | 35.0% | |
| GAACCAAAACTGAAAAACGT+TGG | - | chr4.4:83625297-83625316 | MS.gene89779:intron | 35.0% | |
| GACAGATTGAGTAATCCAAT+GGG | - | chr4.4:83626586-83626605 | MS.gene89779:CDS | 35.0% | |
| GAGGATCACAAACATTTCAT+TGG | - | chr4.4:83626781-83626800 | MS.gene89779:intron | 35.0% | |
| GATTATTGTTCAGCCTGATA+GGG | - | chr4.4:83626939-83626958 | MS.gene89779:CDS | 35.0% | |
| GTTGTTACATTTACTGTTGG+TGG | - | chr4.4:83625390-83625409 | MS.gene89779:intron | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | - | chr4.4:83628214-83628233 | MS.gene89779:CDS | 35.0% | |
| TATGAGTTCCAGATGCAATA+TGG | - | chr4.4:83627512-83627531 | MS.gene89779:intron | 35.0% | |
| TATGATATGCAAGACAAACC+TGG | + | chr4.4:83627628-83627647 | None:intergenic | 35.0% | |
| TCTCTAGGTTCAGATTTCAA+AGG | + | chr4.4:83627096-83627115 | None:intergenic | 35.0% | |
| TGAAAATAGGTCCAGCAAAT+AGG | + | chr4.4:83626870-83626889 | None:intergenic | 35.0% | |
| TGAAATTGCCAAAAGGATGT+GGG | - | chr4.4:83627220-83627239 | MS.gene89779:intron | 35.0% | |
| TGACAGATTGAGTAATCCAA+TGG | - | chr4.4:83626585-83626604 | MS.gene89779:CDS | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr4.4:83627525-83627544 | MS.gene89779:intron | 35.0% | |
| ! | ATTACTTACCCACATCCTTT+TGG | + | chr4.4:83627231-83627250 | None:intergenic | 35.0% |
| ! | CAGTGATTTGTATTGTTGGT+GGG | - | chr4.4:83625460-83625479 | MS.gene89779:CDS | 35.0% |
| ! | CTTTTGGCAATTTCAGCTTT+TGG | + | chr4.4:83627215-83627234 | None:intergenic | 35.0% |
| ! | GGGCCTAATTCTAATGATTT+TGG | - | chr4.4:83625480-83625499 | MS.gene89779:CDS | 35.0% |
| ! | GTTGTTATTATGTCGTTGCA+TGG | + | chr4.4:83625099-83625118 | None:intergenic | 35.0% |
| ! | TACTTTGGAGACAAGGAAAA+TGG | + | chr4.4:83626484-83626503 | None:intergenic | 35.0% |
| ! | TTCAGGATTTTTGTTCCTGA+AGG | - | chr4.4:83627066-83627085 | MS.gene89779:intron | 35.0% |
| !! | AGAGAGATTGAGTTGAGATT+TGG | + | chr4.4:83625593-83625612 | None:intergenic | 35.0% |
| !! | CAACCAACGTTTTTCAGTTT+TGG | + | chr4.4:83625303-83625322 | None:intergenic | 35.0% |
| ACAATGGTCAAGGAAATTGC+TGG | - | chr4.4:83627910-83627929 | MS.gene89779:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | - | chr4.4:83628215-83628234 | MS.gene89779:CDS | 40.0% | |
| AGCAATTTCCTTGACCATTG+TGG | + | chr4.4:83627911-83627930 | None:intergenic | 40.0% | |
| AGCGTGATTAATGCTATTGC+TGG | - | chr4.4:83625417-83625436 | MS.gene89779:CDS | 40.0% | |
| AGCTTATGTGACCTTAATCG+CGG | - | chr4.4:83627353-83627372 | MS.gene89779:intron | 40.0% | |
| ATTCAGATGAAGCTAGGGAT+TGG | + | chr4.4:83625170-83625189 | None:intergenic | 40.0% | |
| ATTGGAGATGGTCCTACATT+TGG | - | chr4.4:83626967-83626986 | MS.gene89779:CDS | 40.0% | |
| CACATCACTTTCACAAACAC+CGG | - | chr4.4:83628007-83628026 | MS.gene89779:CDS | 40.0% | |
| CATTGAGGTGATTGTTCACA+AGG | - | chr4.4:83628184-83628203 | MS.gene89779:CDS | 40.0% | |
| CCACCAACAATACAAATCAC+TGG | + | chr4.4:83625462-83625481 | None:intergenic | 40.0% | |
| CGATTATTGTTCAGCCTGAT+AGG | - | chr4.4:83626938-83626957 | MS.gene89779:CDS | 40.0% | |
| CTAAGTTCCTGGCTAAAATC+AGG | + | chr4.4:83625540-83625559 | None:intergenic | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | - | chr4.4:83628213-83628232 | MS.gene89779:CDS | 40.0% | |
| CTGAAATTGCCAAAAGGATG+TGG | - | chr4.4:83627219-83627238 | MS.gene89779:intron | 40.0% | |
| GATTTCAAAGGCAAACCTTC+AGG | + | chr4.4:83627084-83627103 | None:intergenic | 40.0% | |
| GGAATTAGTCCTTTAGCAGA+TGG | + | chr4.4:83626760-83626779 | None:intergenic | 40.0% | |
| TCACATTGTATGGTCCATCA+TGG | + | chr4.4:83627851-83627870 | None:intergenic | 40.0% | |
| TGATGGTTATGCAAGGTCTA+GGG | - | chr4.4:83625353-83625372 | MS.gene89779:intron | 40.0% | |
| TGCTAAAGGACTAATTCCTG+AGG | - | chr4.4:83626762-83626781 | MS.gene89779:intron | 40.0% | |
| TTATATGTAGGTCACAGCAC+AGG | - | chr4.4:83627743-83627762 | MS.gene89779:intron | 40.0% | |
| TTCAGATGAAGCTAGGGATT+GGG | + | chr4.4:83625169-83625188 | None:intergenic | 40.0% | |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | - | chr4.4:83628106-83628125 | MS.gene89779:CDS | 40.0% |
| ! | ATGGTGATTTGCATGATTCG+AGG | + | chr4.4:83625080-83625099 | None:intergenic | 40.0% |
| ! | CCAGTGATTTGTATTGTTGG+TGG | - | chr4.4:83625459-83625478 | MS.gene89779:CDS | 40.0% |
| ! | CTTGGTTTGATTATAGGCTG+TGG | - | chr4.4:83626321-83626340 | MS.gene89779:CDS | 40.0% |
| ! | GCTTTCGCTACTCTTAGTTT+TGG | + | chr4.4:83626682-83626701 | None:intergenic | 40.0% |
| ! | GGTTGATTCAGATGAAGCTA+GGG | + | chr4.4:83625175-83625194 | None:intergenic | 40.0% |
| ! | TGGTGATTTGCATGATTCGA+GGG | + | chr4.4:83625079-83625098 | None:intergenic | 40.0% |
| ! | TTGGTTGATGCTATCCACAA+TGG | - | chr4.4:83627894-83627913 | MS.gene89779:CDS | 40.0% |
| !! | ATTGAGTTGAGATTTGGACC+TGG | + | chr4.4:83625587-83625606 | None:intergenic | 40.0% |
| !! | CTGATTTTAGCCAGGAACTT+AGG | - | chr4.4:83625538-83625557 | MS.gene89779:CDS | 40.0% |
| !! | TGAAGGGGATTTTTGGATTG+TGG | + | chr4.4:83625145-83625164 | None:intergenic | 40.0% |
| !!! | ATTGGGTTGAAGGGGATTTT+TGG | + | chr4.4:83625152-83625171 | None:intergenic | 40.0% |
| AAATGTGTCAGTGTCGTGTC+CGG | + | chr4.4:83628029-83628048 | None:intergenic | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr4.4:83627590-83627609 | MS.gene89779:intron | 45.0% | |
| AATAGTGACACTGGCATAGG+TGG | - | chr4.4:83625712-83625731 | MS.gene89779:CDS | 45.0% | |
| AATGCTGGATATGCTGCTGA+TGG | - | chr4.4:83625336-83625355 | MS.gene89779:intron | 45.0% | |
| ACTGAAAGTAGGGTGAGGAA+TGG | + | chr4.4:83626449-83626468 | None:intergenic | 45.0% | |
| AGGAAATTGCTGGACCACTA+AGG | - | chr4.4:83627920-83627939 | MS.gene89779:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | - | chr4.4:83628222-83628241 | MS.gene89779:CDS | 45.0% | |
| ATAGGCTGTGGTCAACAACT+TGG | - | chr4.4:83626333-83626352 | MS.gene89779:CDS | 45.0% | |
| ATGCTGCTGATGGTTATGCA+AGG | - | chr4.4:83625346-83625365 | MS.gene89779:intron | 45.0% | |
| CTGATGGTTATGCAAGGTCT+AGG | - | chr4.4:83625352-83625371 | MS.gene89779:intron | 45.0% | |
| GAAGCAATTCAGACAGCAAC+AGG | - | chr4.4:83628137-83628156 | MS.gene89779:CDS | 45.0% | |
| GAGTAATCCAATGGGATTGG+AGG | - | chr4.4:83626594-83626613 | MS.gene89779:CDS | 45.0% | |
| GATAGGGTTGTGATTGGAGA+TGG | - | chr4.4:83626955-83626974 | MS.gene89779:CDS | 45.0% | |
| GATGCTATCCACAATGGTCA+AGG | - | chr4.4:83627900-83627919 | MS.gene89779:CDS | 45.0% | |
| GATGGTTATGCAAGGTCTAG+GGG | - | chr4.4:83625354-83625373 | MS.gene89779:intron | 45.0% | |
| GCAGATGGCATGACAGAATA+CGG | + | chr4.4:83626745-83626764 | None:intergenic | 45.0% | |
| GCTGATGCATACCTATTTGC+TGG | - | chr4.4:83626856-83626875 | MS.gene89779:CDS | 45.0% | |
| GCTTCATCTGAATCAACCCT+AGG | - | chr4.4:83625177-83625196 | MS.gene89779:CDS | 45.0% | |
| GGAGACAAGGAAAATGGAAC+AGG | + | chr4.4:83626478-83626497 | None:intergenic | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr4.4:83627533-83627552 | MS.gene89779:intron | 45.0% | |
| GTGAAACCAGTACTAGTAGC+CGG | - | chr4.4:83626655-83626674 | MS.gene89779:CDS | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | - | chr4.4:83628223-83628242 | MS.gene89779:CDS | 45.0% | |
| GTTTCCACAATGCTGAGATG+CGG | - | chr4.4:83627768-83627787 | MS.gene89779:CDS | 45.0% | |
| TCTCCAATCACAACCCTATC+AGG | + | chr4.4:83626955-83626974 | None:intergenic | 45.0% | |
| TCTGGAAACACCTAAGTTCC+TGG | + | chr4.4:83625551-83625570 | None:intergenic | 45.0% | |
| TCTGTCATGCCATCTGCTAA+AGG | - | chr4.4:83626748-83626767 | MS.gene89779:intron | 45.0% | |
| TGAACCTAGAGAGCCTTTGA+GGG | - | chr4.4:83627104-83627123 | MS.gene89779:intron | 45.0% | |
| TGCTGTAACGAACTGAATGC+TGG | - | chr4.4:83625321-83625340 | MS.gene89779:intron | 45.0% | |
| TGGTTATGCTCAAGCTGTTC+CGG | - | chr4.4:83627565-83627584 | MS.gene89779:intron | 45.0% | |
| TTAACCCTCAAAGGCTCTCT+AGG | + | chr4.4:83627111-83627130 | None:intergenic | 45.0% | |
| TTGTGCCGAGATTGTGGAAT+CGG | - | chr4.4:83626834-83626853 | MS.gene89779:intron | 45.0% | |
| ! | ATCAGCCGATTCCACAATCT+CGG | + | chr4.4:83626842-83626861 | None:intergenic | 45.0% |
| ! | GAACTGGAATTACACTGGCT+TGG | - | chr4.4:83627875-83627894 | MS.gene89779:CDS | 45.0% |
| ! | GGGTTGATTCAGATGAAGCT+AGG | + | chr4.4:83625176-83625195 | None:intergenic | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr4.4:83627596-83627615 | MS.gene89779:intron | 45.0% |
| ! | TGCATTTTGTGCCGAGATTG+TGG | - | chr4.4:83626828-83626847 | MS.gene89779:intron | 45.0% |
| !! | AAGCTAGGGATTGGGTTGAA+GGG | + | chr4.4:83625161-83625180 | None:intergenic | 45.0% |
| !! | CATTGGTGATGGAAGTTTCC+AGG | - | chr4.4:83627607-83627626 | MS.gene89779:intron | 45.0% |
| !! | GAAACAGTGCCGTTTGATGA+AGG | + | chr4.4:83625123-83625142 | None:intergenic | 45.0% |
| !! | GGCTACTAGTACTGGTTTCA+CGG | + | chr4.4:83626656-83626675 | None:intergenic | 45.0% |
| !! | TGGTTTGCCTGATTTTAGCC+AGG | - | chr4.4:83625530-83625549 | MS.gene89779:CDS | 45.0% |
| !!! | CGCTACTCTTAGTTTTGGAC+CGG | + | chr4.4:83626677-83626696 | None:intergenic | 45.0% |
| !! | AAATTTATCTTATTATAATT+TGG | - | chr4.4:83626043-83626062 | MS.gene89779:intron | 5.0% |
| !!! | TTTTTTTTAAAATTATATGT+AGG | - | chr4.4:83627731-83627750 | MS.gene89779:intron | 5.0% |
| AAACCATGAGTCCCCTGTCT+CGG | + | chr4.4:83627187-83627206 | None:intergenic | 50.0% | |
| AAGGTAAGGTTGAAGTCCCC+GGG | + | chr4.4:83625258-83625277 | None:intergenic | 50.0% | |
| ACAGGTTCGCGACTGAAAGT+AGG | + | chr4.4:83626460-83626479 | None:intergenic | 50.0% | |
| ACTGCTGTTATTGCCGAGAC+AGG | - | chr4.4:83627171-83627190 | MS.gene89779:intron | 50.0% | |
| CAAGCAATCACTCGCTTCTC+CGG | + | chr4.4:83627587-83627606 | None:intergenic | 50.0% | |
| CAAGGTAAGGTTGAAGTCCC+CGG | + | chr4.4:83625259-83625278 | None:intergenic | 50.0% | |
| CAGCCTGATAGGGTTGTGAT+TGG | - | chr4.4:83626949-83626968 | MS.gene89779:CDS | 50.0% | |
| CAGGTTCGCGACTGAAAGTA+GGG | + | chr4.4:83626459-83626478 | None:intergenic | 50.0% | |
| CCTCAATGCAACCGCGATTA+AGG | + | chr4.4:83627367-83627386 | None:intergenic | 50.0% | |
| CCTGGTAGCAAGTAACAGTC+TGG | + | chr4.4:83625569-83625588 | None:intergenic | 50.0% | |
| CCTTAATCGCGGTTGCATTG+AGG | - | chr4.4:83627364-83627383 | MS.gene89779:intron | 50.0% | |
| CTGAACCTAGAGAGCCTTTG+AGG | - | chr4.4:83627103-83627122 | MS.gene89779:intron | 50.0% | |
| CTGCTGTTATTGCCGAGACA+GGG | - | chr4.4:83627172-83627191 | MS.gene89779:intron | 50.0% | |
| TGCATGATTCGAGGGATCCT+AGG | + | chr4.4:83625071-83625090 | None:intergenic | 50.0% | |
| TGCTGTTATTGCCGAGACAG+GGG | - | chr4.4:83627173-83627192 | MS.gene89779:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr4.4:83627545-83627564 | MS.gene89779:intron | 50.0% | |
| TTATGCAAGGTCTAGGGGTG+TGG | - | chr4.4:83625359-83625378 | MS.gene89779:intron | 50.0% | |
| TTTGGACCGGCTACTAGTAC+TGG | + | chr4.4:83626664-83626683 | None:intergenic | 50.0% | |
| ! | ACCGATATTTTCACCGTCCC+CGG | - | chr4.4:83625237-83625256 | MS.gene89779:intron | 50.0% |
| ! | CCAGACTGTTACTTGCTACC+AGG | - | chr4.4:83625566-83625585 | MS.gene89779:CDS | 50.0% |
| ! | TATGCAAGGTCTAGGGGTGT+GGG | - | chr4.4:83625360-83625379 | MS.gene89779:intron | 50.0% |
| !! | AGCTAGGGATTGGGTTGAAG+GGG | + | chr4.4:83625160-83625179 | None:intergenic | 50.0% |
| !! | GAAGCTAGGGATTGGGTTGA+AGG | + | chr4.4:83625162-83625181 | None:intergenic | 50.0% |
| !!! | TCAGTTTTGGTTCCGCGATC+AGG | + | chr4.4:83625290-83625309 | None:intergenic | 50.0% |
| AATGGGATTGGAGGCAGCAG+TGG | - | chr4.4:83626603-83626622 | MS.gene89779:CDS | 55.0% | |
| ACTGCTGCCTCCAATCCCAT+TGG | + | chr4.4:83626604-83626623 | None:intergenic | 55.0% | |
| AGGTAAGGTTGAAGTCCCCG+GGG | + | chr4.4:83625257-83625276 | None:intergenic | 55.0% | |
| CCCGGGGACGGTGAAAATAT+CGG | + | chr4.4:83625241-83625260 | None:intergenic | 55.0% | |
| CCCTAGGAAGTCACCTAGCA+CGG | - | chr4.4:83625193-83625212 | MS.gene89779:CDS | 55.0% | |
| CCGTGCTAGGTGACTTCCTA+GGG | + | chr4.4:83625196-83625215 | None:intergenic | 55.0% | |
| CTGTCCGCATCTCAGCATTG+TGG | + | chr4.4:83627775-83627794 | None:intergenic | 55.0% | |
| TCAGGTGGTCGAGCAAGGTA+AGG | + | chr4.4:83625272-83625291 | None:intergenic | 55.0% | |
| TCGCGACTGAAAGTAGGGTG+AGG | + | chr4.4:83626454-83626473 | None:intergenic | 55.0% | |
| ! | CCGATATTTTCACCGTCCCC+GGG | - | chr4.4:83625238-83625257 | MS.gene89779:intron | 55.0% |
| ! | CGATATTTTCACCGTCCCCG+GGG | - | chr4.4:83625239-83625258 | MS.gene89779:intron | 55.0% |
| !!! | GTTTTGGTTCCGCGATCAGG+TGG | + | chr4.4:83625287-83625306 | None:intergenic | 55.0% |
| AAGGTTGAAGTCCCCGGGGA+CGG | + | chr4.4:83625253-83625272 | None:intergenic | 60.0% | |
| CTTCCACTAGTCGCCGTGCT+AGG | + | chr4.4:83625209-83625228 | None:intergenic | 60.0% | |
| CTTGCTCGACCACCTGATCG+CGG | - | chr4.4:83625275-83625294 | MS.gene89779:intron | 60.0% | |
| GCACGGCGACTAGTGGAAGT+CGG | - | chr4.4:83625210-83625229 | MS.gene89779:intron | 60.0% | |
| GCCGTGCTAGGTGACTTCCT+AGG | + | chr4.4:83625197-83625216 | None:intergenic | 60.0% | |
| TCACCTAGCACGGCGACTAG+TGG | - | chr4.4:83625203-83625222 | MS.gene89779:CDS | 60.0% | |
| TTGCCGAGACAGGGGACTCA+TGG | - | chr4.4:83627181-83627200 | MS.gene89779:intron | 60.0% | |
| CGCGATCAGGTGGTCGAGCA+AGG | + | chr4.4:83625277-83625296 | None:intergenic | 65.0% | |
| GGCAGCAGTGGAAGCAGCTG+CGG | - | chr4.4:83626615-83626634 | MS.gene89779:CDS | 65.0% | |
| ! | CGCTCGCGAAGCGCCTTAAG+AGG | - | chr4.4:83627019-83627038 | MS.gene89779:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 83625057 | 83628283 | 83625057 | ID=MS.gene89779 |
| chr4.4 | mRNA | 83625057 | 83628283 | 83625057 | ID=MS.gene89779.t1;Parent=MS.gene89779 |
| chr4.4 | exon | 83627753 | 83628283 | 83627753 | ID=MS.gene89779.t1.exon1;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83627753 | 83628283 | 83627753 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| chr4.4 | exon | 83626840 | 83627003 | 83626840 | ID=MS.gene89779.t1.exon2;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83626840 | 83627003 | 83626840 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| chr4.4 | exon | 83626099 | 83626749 | 83626099 | ID=MS.gene89779.t1.exon3;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83626099 | 83626749 | 83626099 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| chr4.4 | exon | 83625712 | 83625829 | 83625712 | ID=MS.gene89779.t1.exon4;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83625712 | 83625829 | 83625712 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| chr4.4 | exon | 83625399 | 83625587 | 83625399 | ID=MS.gene89779.t1.exon5;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83625399 | 83625587 | 83625399 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| chr4.4 | exon | 83625057 | 83625227 | 83625057 | ID=MS.gene89779.t1.exon6;Parent=MS.gene89779.t1 |
| chr4.4 | CDS | 83625057 | 83625227 | 83625057 | ID=cds.MS.gene89779.t1;Parent=MS.gene89779.t1 |
| Gene Sequence |
| Protein sequence |
