Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90948.t1 | XP_013456524.1 | 98.5 | 343 | 3 | 1 | 1 | 341 | 1 | 343 | 7.80E-183 | 649.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90948.t1 | Q9AST1 | 71.5 | 319 | 76 | 6 | 10 | 324 | 5 | 312 | 3.6e-112 | 406.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90948.t1 | A0A072UXF8 | 98.5 | 343 | 3 | 1 | 1 | 341 | 1 | 343 | 5.6e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051975 | MS.gene90948 | 0.811891 | 5.58E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene90948 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene90948 | 0.804635 | 1.97E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene90948 | 0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene90948 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene056776 | MS.gene90948 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene90948 | 0.836414 | 9.49E-57 | -1.69E-46 |
| MS.gene057890 | MS.gene90948 | -0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene059830 | MS.gene90948 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene90948 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene90948 | 0.813273 | 2.78E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90948.t1 | MTR_4g074230 | 98.698 | 384 | 3 | 1 | 1 | 382 | 1 | 384 | 0.0 | 770 |
| MS.gene90948.t1 | MTR_4g074230 | 98.754 | 321 | 4 | 0 | 1 | 321 | 1 | 321 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90948.t1 | AT1G50300 | 67.663 | 368 | 101 | 8 | 10 | 370 | 5 | 361 | 2.98e-133 | 386 |
| MS.gene90948.t1 | AT1G50300 | 63.121 | 282 | 86 | 8 | 96 | 370 | 1 | 271 | 8.75e-72 | 226 |
Find 119 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGTTGGCTGAATATTT+TGG | 0.202918 | 4.2:-34485025 | MS.gene90948:CDS |
| GGAAAATTTGCTCCTTCTAA+TGG | 0.205983 | 4.2:-34485088 | MS.gene90948:CDS |
| GGCCGTGGCAGGGGACGTTC+TGG | 0.209011 | 4.2:-34484223 | MS.gene90948:CDS |
| GCTGGTGCTTCTGGCGTTGC+AGG | 0.246144 | 4.2:-34484253 | MS.gene90948:CDS |
| GCACGCCCTGCTGGTGCTTC+TGG | 0.253618 | 4.2:-34484262 | MS.gene90948:CDS |
| GCACGAGTGCTTCCTGGTTC+AGG | 0.255195 | 4.2:-34481224 | MS.gene90948:CDS |
| CAGGAGGAGGTGGCCGTGGC+AGG | 0.278126 | 4.2:-34484234 | MS.gene90948:CDS |
| GGTGCAACTGCAGGGCTATT+TGG | 0.284772 | 4.2:-34484169 | MS.gene90948:CDS |
| TGGTTCAGGGCGTGCTGGTT+GGG | 0.289046 | 4.2:-34481210 | MS.gene90948:CDS |
| CTCTTGTTGCCATGGTTTGC+TGG | 0.299452 | 4.2:+34484467 | None:intergenic |
| GATTCCATGGCAAGCATTCC+TGG | 0.304742 | 4.2:-34485109 | None:intergenic |
| AGAGATCGAGACAGGGATTA+TGG | 0.310355 | 4.2:-34480409 | MS.gene90948:CDS |
| ATGTCTGCAACTTGCCTTAT+GGG | 0.313152 | 4.2:-34485057 | MS.gene90948:CDS |
| TGGAACCATTGGAGTTATAA+AGG | 0.318896 | 4.2:-34485005 | MS.gene90948:intron |
| GGTGAGCTGTATGATGAATT+TGG | 0.319502 | 4.2:-34481293 | MS.gene90948:CDS |
| TATGTCTGCAACTTGCCTTA+TGG | 0.328564 | 4.2:-34485058 | MS.gene90948:CDS |
| CTGGTTCAGGGCGTGCTGGT+TGG | 0.328885 | 4.2:-34481211 | MS.gene90948:CDS |
| AGTGATGTCGATGGTGTTAA+TGG | 0.330703 | 4.2:-34484516 | MS.gene90948:CDS |
| GGACGTTCTGGGCCAGATGC+AGG | 0.337930 | 4.2:-34484211 | MS.gene90948:CDS |
| CATATCACAGACCTTGTATT+CGG | 0.343657 | 4.2:+34484429 | None:intergenic |
| GAAAATTTGCTCCTTCTAAT+GGG | 0.344168 | 4.2:-34485087 | MS.gene90948:CDS |
| TGTGGAAGTGCACGCCCTGC+TGG | 0.347172 | 4.2:-34484271 | MS.gene90948:CDS |
| CGTCCAGCTGGTGCAACTGC+AGG | 0.354707 | 4.2:-34484178 | MS.gene90948:CDS |
| AGTTTCAGATTGCTGTGTTT+TGG | 0.356059 | 4.2:+34481247 | None:intergenic |
| GTACAGGGAAACCTAAAATA+TGG | 0.363199 | 4.2:-34484764 | MS.gene90948:CDS |
| GAAACTGCACGAGTGCTTCC+TGG | 0.382916 | 4.2:-34481230 | MS.gene90948:CDS |
| GGCTATTTGGTCCCAATGAC+TGG | 0.387107 | 4.2:-34484156 | MS.gene90948:CDS |
| CACGAGTGCTTCCTGGTTCA+GGG | 0.389853 | 4.2:-34481223 | MS.gene90948:CDS |
| ACGTTCTGGGCCAGATGCAG+GGG | 0.392528 | 4.2:-34484209 | MS.gene90948:CDS |
| GGAGGAGGTGGCCGTGGCAG+GGG | 0.394233 | 4.2:-34484232 | MS.gene90948:CDS |
| GCCGTGGCAGGGGACGTTCT+GGG | 0.411401 | 4.2:-34484222 | MS.gene90948:CDS |
| CTGCTATTGCAGTATATGTT+AGG | 0.412357 | 4.2:+34484583 | None:intergenic |
| GACGTTCTGGGCCAGATGCA+GGG | 0.412571 | 4.2:-34484210 | MS.gene90948:CDS |
| TGGCACGGAATTTCTTCTTA+AGG | 0.415207 | 4.2:+34481267 | None:intergenic |
| ATAGGTGTGGCAATATCAAT+TGG | 0.418424 | 4.2:-34483077 | MS.gene90948:intron |
| GTCGAAATAGAGAGAGGGAC+AGG | 0.428254 | 4.2:-34480435 | MS.gene90948:CDS |
| GGTTGGGAGGTTGAGGATCT+AGG | 0.428724 | 4.2:-34481194 | MS.gene90948:intron |
| ACGTCAGTACCAGCAACAAC+CGG | 0.429856 | 4.2:+34484558 | None:intergenic |
| CTTCCTGGTTCAGGGCGTGC+TGG | 0.434352 | 4.2:-34481215 | MS.gene90948:CDS |
| AGGAGGAGGTGGCCGTGGCA+GGG | 0.441158 | 4.2:-34484233 | MS.gene90948:CDS |
| GCGTGCTGGTTGGGAGGTTG+AGG | 0.442475 | 4.2:-34481201 | MS.gene90948:CDS |
| ATAGCAGACCCGGTTGTTGC+TGG | 0.443186 | 4.2:-34484567 | MS.gene90948:CDS |
| CAATCGCCCTCTTGTTGCCA+TGG | 0.443269 | 4.2:+34484459 | None:intergenic |
| ACAGGGGAAGAGATCGAGAC+AGG | 0.444481 | 4.2:-34480417 | MS.gene90948:CDS |
| ACATCACTTTCAGTTTCCTC+TGG | 0.451741 | 4.2:+34484531 | None:intergenic |
| GCAACGCCAGAAGCACCAGC+AGG | 0.461187 | 4.2:+34484256 | None:intergenic |
| GCTTCTGGCGTTGCAGGAGG+AGG | 0.468468 | 4.2:-34484247 | MS.gene90948:CDS |
| AGCCCTGCAGTTGCACCAGC+TGG | 0.469244 | 4.2:+34484175 | None:intergenic |
| TTTAATATCGGTGTCTACTT+CGG | 0.473694 | 4.2:+34480374 | None:intergenic |
| GTTGCAGGAGGAGGTGGCCG+TGG | 0.474248 | 4.2:-34484238 | MS.gene90948:CDS |
| CAACCAGCACGCCCTGAACC+AGG | 0.475347 | 4.2:+34481212 | None:intergenic |
| GTCACAGTAGCATCTCCCTT+TGG | 0.480691 | 4.2:+34484714 | None:intergenic |
| TCTGGCGTTGCAGGAGGAGG+TGG | 0.481544 | 4.2:-34484244 | MS.gene90948:CDS |
| CATGGCAACAAGAGGGCGAT+TGG | 0.484158 | 4.2:-34484458 | MS.gene90948:CDS |
| CATTGGACAAGGCCAGTCAT+TGG | 0.485145 | 4.2:+34484144 | None:intergenic |
| CAGGGATTATGGACGAGAAC+GGG | 0.487630 | 4.2:-34480398 | MS.gene90948:CDS |
| TTGCAGAAAGATAAACGTAC+AGG | 0.490948 | 4.2:-34484780 | MS.gene90948:intron |
| ACACCACCCTCGTTGTGCCC+AGG | 0.493132 | 4.2:+34483015 | None:intergenic |
| ATTGGACAAGGCCAGTCATT+GGG | 0.494257 | 4.2:+34484145 | None:intergenic |
| ATTTGCAATACAAACAAGCC+TGG | 0.495239 | 4.2:-34483033 | MS.gene90948:CDS |
| ATATTATCGTCGGTCCCATA+AGG | 0.496822 | 4.2:+34485043 | None:intergenic |
| GAGTCAAGGGACCGTTATGA+TGG | 0.500996 | 4.2:-34480499 | MS.gene90948:CDS |
| AGACAGAGGAAGAGAGTCAA+GGG | 0.502977 | 4.2:-34480512 | MS.gene90948:CDS |
| ATTGGATGTGCCCGAATACA+AGG | 0.505444 | 4.2:-34484440 | MS.gene90948:intron |
| TTAAACAGAGGAGGGCGAGC+TGG | 0.505797 | 4.2:-34481460 | MS.gene90948:intron |
| ACATAGATAGACCCATTAGA+AGG | 0.508080 | 4.2:+34485076 | None:intergenic |
| ATATCACAGACCTTGTATTC+GGG | 0.510417 | 4.2:+34484430 | None:intergenic |
| GCCCAGAACGTCCCCTGCCA+CGG | 0.511393 | 4.2:+34484221 | None:intergenic |
| GTCCAGCTGGTGCAACTGCA+GGG | 0.522936 | 4.2:-34484177 | MS.gene90948:CDS |
| AGATGCTACTGTGACATATG+AGG | 0.528491 | 4.2:-34484706 | MS.gene90948:CDS |
| GGCACAACGAGGGTGGTGTA+AGG | 0.528607 | 4.2:-34483011 | MS.gene90948:intron |
| TCGAAATAGAGAGAGGGACA+GGG | 0.538004 | 4.2:-34480434 | MS.gene90948:CDS |
| TTCAGGGCGTGCTGGTTGGG+AGG | 0.541272 | 4.2:-34481207 | MS.gene90948:CDS |
| TTACAAAGAGCTTGATGAAG+AGG | 0.552917 | 4.2:-34481434 | MS.gene90948:CDS |
| TAGGTGTGGCAATATCAATT+GGG | 0.553457 | 4.2:-34483076 | MS.gene90948:CDS |
| CAGGGGAAGAGATCGAGACA+GGG | 0.554781 | 4.2:-34480416 | MS.gene90948:CDS |
| GTCGATGGTGTTAATGGAAG+AGG | 0.554855 | 4.2:-34484510 | MS.gene90948:CDS |
| CCATACCTTTATAACTCCAA+TGG | 0.555137 | 4.2:+34485000 | None:intergenic |
| GGTGCTTCTGGCGTTGCAGG+AGG | 0.557530 | 4.2:-34484250 | MS.gene90948:CDS |
| TTCTCTGCTCTCCATCATAA+CGG | 0.558553 | 4.2:+34480488 | None:intergenic |
| AAAGAGACGAATGAACCAAA+GGG | 0.558771 | 4.2:-34484729 | MS.gene90948:CDS |
| CTGCAGTTGCACCAGCTGGA+CGG | 0.561682 | 4.2:+34484179 | None:intergenic |
| GGTGTTAATGGAAGAGGCAG+AGG | 0.562740 | 4.2:-34484504 | MS.gene90948:CDS |
| CTGCCGTGGCTGCTGTTGAG+TGG | 0.571241 | 4.2:-34484674 | MS.gene90948:CDS |
| CGAAATAGAGAGAGGGACAG+GGG | 0.581694 | 4.2:-34480433 | MS.gene90948:CDS |
| GAGACAGAGGAAGAGAGTCA+AGG | 0.587406 | 4.2:-34480513 | MS.gene90948:CDS |
| TTGAAGAAACTAAACGTCGC+AGG | 0.591162 | 4.2:-34481408 | MS.gene90948:CDS |
| ACAGGGATTATGGACGAGAA+CGG | 0.593289 | 4.2:-34480399 | MS.gene90948:CDS |
| AACAGAGGAGGGCGAGCTGG+AGG | 0.593908 | 4.2:-34481457 | MS.gene90948:intron |
| TTCAGCCAACATATTATCGT+CGG | 0.597239 | 4.2:+34485033 | None:intergenic |
| AAACCACTCAACAGCAGCCA+CGG | 0.598977 | 4.2:+34484671 | None:intergenic |
| CAAAGAGACGAATGAACCAA+AGG | 0.600702 | 4.2:-34484730 | MS.gene90948:CDS |
| AAGCCTGGGCACAACGAGGG+TGG | 0.605160 | 4.2:-34483018 | MS.gene90948:CDS |
| TTTGCAATACAAACAAGCCT+GGG | 0.606882 | 4.2:-34483032 | MS.gene90948:CDS |
| CGTTCTGGGCCAGATGCAGG+GGG | 0.607334 | 4.2:-34484208 | MS.gene90948:CDS |
| TGGGACCGACGATAATATGT+TGG | 0.612755 | 4.2:-34485038 | MS.gene90948:CDS |
| CAACGCCAGAAGCACCAGCA+GGG | 0.613406 | 4.2:+34484257 | None:intergenic |
| CGTCAGTACCAGCAACAACC+GGG | 0.613629 | 4.2:+34484559 | None:intergenic |
| CAGCAAACCATGGCAACAAG+AGG | 0.614216 | 4.2:-34484466 | MS.gene90948:CDS |
| ACAGAGAGCATAACGAGGAG+AGG | 0.615331 | 4.2:-34480465 | MS.gene90948:CDS |
| CGGGGTGCGTGTAATCGCTG+TGG | 0.632515 | 4.2:-34484289 | MS.gene90948:CDS |
| ACAGCAGCCACGGCAGCATG+TGG | 0.634443 | 4.2:+34484681 | None:intergenic |
| GTTGTTGCTGGTACTGACGT+CGG | 0.634611 | 4.2:-34484555 | MS.gene90948:CDS |
| AGCAAACCATGGCAACAAGA+GGG | 0.635048 | 4.2:-34484465 | MS.gene90948:CDS |
| TGAGGATCCACATGCTGCCG+TGG | 0.639570 | 4.2:-34484688 | MS.gene90948:CDS |
| TGGTACTGACGTCGGACCAG+AGG | 0.639768 | 4.2:-34484547 | MS.gene90948:CDS |
| AAAGCAGTCGAAATAGAGAG+AGG | 0.640490 | 4.2:-34480441 | MS.gene90948:CDS |
| AAGAAACTAAACGTCGCAGG+CGG | 0.641204 | 4.2:-34481405 | MS.gene90948:CDS |
| TGCAGAAAGATAAACGTACA+GGG | 0.643687 | 4.2:-34484779 | MS.gene90948:intron |
| AAGCAGTCGAAATAGAGAGA+GGG | 0.643715 | 4.2:-34480440 | MS.gene90948:CDS |
| TACAATTGGAGTTTATATAG+CGG | 0.645043 | 4.2:-34484625 | MS.gene90948:CDS |
| AACAAGCCTGGGCACAACGA+GGG | 0.649708 | 4.2:-34483021 | MS.gene90948:CDS |
| TTGATGCTTCCAGCAAACCA+TGG | 0.653109 | 4.2:-34484476 | MS.gene90948:CDS |
| ATATACTGCAATAGCAGACC+CGG | 0.656715 | 4.2:-34484577 | MS.gene90948:CDS |
| GAGAAACAGAGAGCATAACG+AGG | 0.665827 | 4.2:-34480470 | MS.gene90948:CDS |
| ACAAAATCGTACATTGGACA+AGG | 0.668648 | 4.2:+34484133 | None:intergenic |
| GCAATATCAATTGGGCAAAG+CGG | 0.687100 | 4.2:-34483068 | MS.gene90948:CDS |
| AAACAAGCCTGGGCACAACG+AGG | 0.703032 | 4.2:-34483022 | MS.gene90948:CDS |
| GAAACTGAAAGTGATGTCGA+TGG | 0.721373 | 4.2:-34484525 | MS.gene90948:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAACAAAAAGATAAT+AGG | + | chr4.2:34484520-34484539 | None:intergenic | 10.0% |
| !! | AATACATGTTATATATAAAT+TGG | - | chr4.2:34484124-34484143 | MS.gene90948:intron | 10.0% |
| !! | AATCATAGTAATAAGTAATA+TGG | - | chr4.2:34483283-34483302 | MS.gene90948:intron | 15.0% |
| !! | ATGTATTTATGTAAAATGAA+GGG | + | chr4.2:34483920-34483939 | None:intergenic | 15.0% |
| !! | ATTTATTAAGAAAATGTGAA+TGG | + | chr4.2:34483957-34483976 | None:intergenic | 15.0% |
| !! | TATGTATTTATGTAAAATGA+AGG | + | chr4.2:34483921-34483940 | None:intergenic | 15.0% |
| !! | TTAAAAATAAATGAAAACCA+AGG | - | chr4.2:34482592-34482611 | MS.gene90948:intron | 15.0% |
| !! | TTTACATAAATACATACATA+CGG | - | chr4.2:34483925-34483944 | MS.gene90948:intron | 15.0% |
| !!! | TATATTTTAGTATTTCTCTT+TGG | + | chr4.2:34483348-34483367 | None:intergenic | 15.0% |
| !! | AATTGTAATCTAACAATGTT+AGG | + | chr4.2:34484441-34484460 | None:intergenic | 20.0% |
| !! | AGATGATGAAATTATAGATT+GGG | + | chr4.2:34481835-34481854 | None:intergenic | 20.0% |
| !! | AGTATAAATAAATCAGACAA+CGG | + | chr4.2:34481392-34481411 | None:intergenic | 20.0% |
| !! | ATAATATGTGATTACTTGAA+TGG | - | chr4.2:34480520-34480539 | MS.gene90948:CDS | 20.0% |
| !! | ATTATAATACTCAATGCAAA+AGG | + | chr4.2:34481805-34481824 | None:intergenic | 20.0% |
| !! | ATTGTAATCTAACAATGTTA+GGG | + | chr4.2:34484440-34484459 | None:intergenic | 20.0% |
| !! | CCTAAATAAATAGAGAAATA+AGG | - | chr4.2:34483255-34483274 | MS.gene90948:intron | 20.0% |
| !! | TAGATGATGAAATTATAGAT+TGG | + | chr4.2:34481836-34481855 | None:intergenic | 20.0% |
| !! | TATCATATTCAATTTACTTG+TGG | + | chr4.2:34481591-34481610 | None:intergenic | 20.0% |
| !! | TTACATAAATACATACATAC+GGG | - | chr4.2:34483926-34483945 | MS.gene90948:intron | 20.0% |
| !! | TTATAATACTCAATGCAAAA+GGG | + | chr4.2:34481804-34481823 | None:intergenic | 20.0% |
| !! | TTTGTAAATTGGATATTTAC+AGG | + | chr4.2:34484807-34484826 | None:intergenic | 20.0% |
| !!! | ACAATTTTGAGTTATCATTA+TGG | - | chr4.2:34484455-34484474 | MS.gene90948:CDS | 20.0% |
| !!! | CCTTATTTCTCTATTTATTT+AGG | + | chr4.2:34483258-34483277 | None:intergenic | 20.0% |
| !!! | TAGTTCTCTATGAATTTTAA+AGG | - | chr4.2:34481862-34481881 | MS.gene90948:intron | 20.0% |
| !!! | TCAATAACTGAAAAAGTATA+TGG | + | chr4.2:34483841-34483860 | None:intergenic | 20.0% |
| !!! | TCATGATATAACCATATTTT+AGG | + | chr4.2:34480728-34480747 | None:intergenic | 20.0% |
| !!! | TCTCTATTTATTTAGGATTA+GGG | + | chr4.2:34483251-34483270 | None:intergenic | 20.0% |
| !!! | TTCTCTATTTATTTAGGATT+AGG | + | chr4.2:34483252-34483271 | None:intergenic | 20.0% |
| !!! | TTCTGTAACATTTTGTAAAT+TGG | + | chr4.2:34484818-34484837 | None:intergenic | 20.0% |
| !!! | TTTAACAACAAAGATTTTCA+TGG | - | chr4.2:34480827-34480846 | MS.gene90948:intron | 20.0% |
| ! | AAAAACCAACCTCTATATAT+AGG | - | chr4.2:34483215-34483234 | MS.gene90948:intron | 25.0% |
| ! | AAAACCAACCTCTATATATA+GGG | - | chr4.2:34483216-34483235 | MS.gene90948:intron | 25.0% |
| ! | AAAACCCCAACAATAAATTA+AGG | + | chr4.2:34483611-34483630 | None:intergenic | 25.0% |
| ! | AAGTAATCACATATTATCGT+AGG | + | chr4.2:34480517-34480536 | None:intergenic | 25.0% |
| ! | ACATGAAATTATGAATCAGT+TGG | - | chr4.2:34484869-34484888 | MS.gene90948:intron | 25.0% |
| ! | AGAAGATTTAATGTATGACA+TGG | - | chr4.2:34483116-34483135 | MS.gene90948:intron | 25.0% |
| ! | AGGTATCAATTAAAGAAAAC+AGG | + | chr4.2:34481698-34481717 | None:intergenic | 25.0% |
| ! | AGTATAATTTAGATTTGTGC+AGG | + | chr4.2:34484693-34484712 | None:intergenic | 25.0% |
| ! | ATAAACAGAACCACATAAAT+GGG | + | chr4.2:34480623-34480642 | None:intergenic | 25.0% |
| ! | ATCGACCTTAATTTATTGTT+GGG | - | chr4.2:34483603-34483622 | MS.gene90948:intron | 25.0% |
| ! | ATCTCAATATTTGATATGTG+TGG | - | chr4.2:34483088-34483107 | MS.gene90948:intron | 25.0% |
| ! | ATTTAATGTATGACATGGTT+TGG | - | chr4.2:34483121-34483140 | MS.gene90948:intron | 25.0% |
| ! | TACAATTGGAGTTTATATAG+CGG | - | chr4.2:34480853-34480872 | MS.gene90948:intron | 25.0% |
| ! | TACATTATGTTGATCTCAAA+TGG | - | chr4.2:34483035-34483054 | MS.gene90948:CDS | 25.0% |
| ! | TAGATGATTTAGGTATATTG+TGG | + | chr4.2:34483456-34483475 | None:intergenic | 25.0% |
| ! | TATAATACTCAATGCAAAAG+GGG | + | chr4.2:34481803-34481822 | None:intergenic | 25.0% |
| ! | TATCGACCTTAATTTATTGT+TGG | - | chr4.2:34483602-34483621 | MS.gene90948:intron | 25.0% |
| ! | TGAAATTACTTTGCTAACTT+GGG | - | chr4.2:34483984-34484003 | MS.gene90948:intron | 25.0% |
| ! | TGCACAAATCTAAATTATAC+TGG | - | chr4.2:34484692-34484711 | MS.gene90948:CDS | 25.0% |
| ! | TTGAAATTACTTTGCTAACT+TGG | - | chr4.2:34483983-34484002 | MS.gene90948:intron | 25.0% |
| !! | ACCATTTTCAAATACTTTCA+TGG | - | chr4.2:34484491-34484510 | MS.gene90948:CDS | 25.0% |
| !! | CTCTATTTATTTAGGATTAG+GGG | + | chr4.2:34483250-34483269 | None:intergenic | 25.0% |
| !! | CTTGTTGTGTTATATTATGT+TGG | - | chr4.2:34481541-34481560 | MS.gene90948:intron | 25.0% |
| !! | GTAATACTTTTAATCCTTAG+AGG | + | chr4.2:34483018-34483037 | None:intergenic | 25.0% |
| !! | GTATCTTTTACTACCATAAA+CGG | + | chr4.2:34482854-34482873 | None:intergenic | 25.0% |
| !! | GTTACTTTCTTATTAAACAG+AGG | - | chr4.2:34484006-34484025 | MS.gene90948:intron | 25.0% |
| !! | GTTTAGTCTTTAGATGATTT+AGG | + | chr4.2:34483466-34483485 | None:intergenic | 25.0% |
| !! | TATCTTTTACTACCATAAAC+GGG | + | chr4.2:34482853-34482872 | None:intergenic | 25.0% |
| !! | TGTTATATATAAATTGGCTC+TGG | - | chr4.2:34484130-34484149 | MS.gene90948:intron | 25.0% |
| !! | TTTTATTAGTCGTTCCTTTT+CGG | - | chr4.2:34484537-34484556 | MS.gene90948:CDS | 25.0% |
| !!! | AATATGTTGGCTGAATATTT+TGG | - | chr4.2:34480453-34480472 | MS.gene90948:CDS | 25.0% |
| !!! | ACCATGAAAGTATTTGAAAA+TGG | + | chr4.2:34484495-34484514 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTTCTTACTGTC+AGG | - | chr4.2:34484157-34484176 | MS.gene90948:CDS | 25.0% |
| !!! | TATGTTTTGAAATAGTATGC+AGG | + | chr4.2:34484607-34484626 | None:intergenic | 25.0% |
| AAATTCCAACATTTCGGATT+TGG | + | chr4.2:34483881-34483900 | None:intergenic | 30.0% | |
| AAGGCTGATAGAATATAAGA+AGG | + | chr4.2:34483371-34483390 | None:intergenic | 30.0% | |
| AATGTGACAAAATCGTACAT+TGG | + | chr4.2:34481354-34481373 | None:intergenic | 30.0% | |
| ACCTAGAAATTCCAACATTT+CGG | + | chr4.2:34483887-34483906 | None:intergenic | 30.0% | |
| ACTTTCTTATTAAACAGAGG+AGG | - | chr4.2:34484009-34484028 | MS.gene90948:intron | 30.0% | |
| AGGAATGAAAGACAAGTATA+TGG | + | chr4.2:34483763-34483782 | None:intergenic | 30.0% | |
| AGTTATCATTATGGCTATAG+CGG | - | chr4.2:34484464-34484483 | MS.gene90948:CDS | 30.0% | |
| AGTTCAATTCTTAAAGGTAG+AGG | + | chr4.2:34483394-34483413 | None:intergenic | 30.0% | |
| ATCATACAAGATAGATGCAA+TGG | + | chr4.2:34483651-34483670 | None:intergenic | 30.0% | |
| ATCCTTACATGAGCAAATTA+TGG | + | chr4.2:34484757-34484776 | None:intergenic | 30.0% | |
| ATGAAATTATAGATTGGGTC+GGG | + | chr4.2:34481830-34481849 | None:intergenic | 30.0% | |
| CACTAATAGTATGTACTTGA+AGG | + | chr4.2:34482516-34482535 | None:intergenic | 30.0% | |
| CGATATCATAAAGATGACAA+TGG | + | chr4.2:34483587-34483606 | None:intergenic | 30.0% | |
| CGGTATTATAAACAGTAAGT+TGG | + | chr4.2:34484908-34484927 | None:intergenic | 30.0% | |
| CTTACTGTTTATAATACCGA+TGG | - | chr4.2:34484909-34484928 | MS.gene90948:intron | 30.0% | |
| CTTATACCTGACATTAAACT+TGG | - | chr4.2:34482285-34482304 | MS.gene90948:intron | 30.0% | |
| CTTTCTTATTAAACAGAGGA+GGG | - | chr4.2:34484010-34484029 | MS.gene90948:intron | 30.0% | |
| GAGGATAGTTCAATTCTTAA+AGG | + | chr4.2:34483400-34483419 | None:intergenic | 30.0% | |
| GATAAACAGAACCACATAAA+TGG | + | chr4.2:34480624-34480643 | None:intergenic | 30.0% | |
| GATGAAATTATAGATTGGGT+CGG | + | chr4.2:34481831-34481850 | None:intergenic | 30.0% | |
| GTTACAATTTACTGCCAATA+AGG | - | chr4.2:34481961-34481980 | MS.gene90948:intron | 30.0% | |
| TAAGGATATGTAGAGATTCT+AGG | - | chr4.2:34484770-34484789 | MS.gene90948:CDS | 30.0% | |
| TCAATTCCAAGTTTAATGTC+AGG | + | chr4.2:34482294-34482313 | None:intergenic | 30.0% | |
| TCAGTTGACCTTATGTAAAT+TGG | + | chr4.2:34481937-34481956 | None:intergenic | 30.0% | |
| TCATACAAGATAGATGCAAT+GGG | + | chr4.2:34483650-34483669 | None:intergenic | 30.0% | |
| TCGACCTTAATTTATTGTTG+GGG | - | chr4.2:34483604-34483623 | MS.gene90948:intron | 30.0% | |
| TCTACCATTTGTTCTATCAT+TGG | - | chr4.2:34483486-34483505 | MS.gene90948:intron | 30.0% | |
| TCTTGTATCCCTATATATAG+AGG | + | chr4.2:34483227-34483246 | None:intergenic | 30.0% | |
| TGACCTTATGTAAATTGGAA+AGG | + | chr4.2:34481932-34481951 | None:intergenic | 30.0% | |
| TGGAAACATGATTTGAAAAC+AGG | + | chr4.2:34483783-34483802 | None:intergenic | 30.0% | |
| TTGCAAAGTGAGGTTTATTT+GGG | - | chr4.2:34480557-34480576 | MS.gene90948:intron | 30.0% | |
| ! | ATCTAAATTATACTGGCTGT+TGG | - | chr4.2:34484699-34484718 | MS.gene90948:CDS | 30.0% |
| ! | CTGAAAAAGTATATGGAAAC+AGG | + | chr4.2:34483834-34483853 | None:intergenic | 30.0% |
| ! | GAAAATTTGCTCCTTCTAAT+GGG | - | chr4.2:34480391-34480410 | MS.gene90948:CDS | 30.0% |
| ! | GATTTTCATGGCAATACAAT+TGG | - | chr4.2:34480839-34480858 | MS.gene90948:intron | 30.0% |
| ! | TCCTTCAACTTTTTATGCAA+CGG | - | chr4.2:34483513-34483532 | MS.gene90948:intron | 30.0% |
| !! | CATTTTGTTTCCCATTTATG+TGG | - | chr4.2:34480610-34480629 | MS.gene90948:intron | 30.0% |
| !! | GAGATTTGTTAACTTTGCTA+AGG | - | chr4.2:34481750-34481769 | MS.gene90948:intron | 30.0% |
| !! | TTGTACTTTTTGTTCCTCTA+AGG | - | chr4.2:34483001-34483020 | MS.gene90948:intron | 30.0% |
| !!! | AAAATTCAGTTTTGTTAGCC+GGG | - | chr4.2:34482685-34482704 | MS.gene90948:intron | 30.0% |
| !!! | CAAAATTCAGTTTTGTTAGC+CGG | - | chr4.2:34482684-34482703 | MS.gene90948:intron | 30.0% |
| !!! | CTTGTCTTCTTTTTTGACAT+AGG | - | chr4.2:34482383-34482402 | MS.gene90948:intron | 30.0% |
| !!! | GAAAATATTTTGATGCCAAG+TGG | - | chr4.2:34482822-34482841 | MS.gene90948:intron | 30.0% |
| !!! | GTGAAACTACATTTTTTCGT+TGG | - | chr4.2:34482551-34482570 | MS.gene90948:intron | 30.0% |
| AAAGAGAAGTTCAGTAGATG+AGG | + | chr4.2:34482037-34482056 | None:intergenic | 35.0% | |
| AAAGAGACGAATGAACCAAA+GGG | - | chr4.2:34480749-34480768 | MS.gene90948:intron | 35.0% | |
| AACAATGTTAGGGAACATGT+GGG | + | chr4.2:34484430-34484449 | None:intergenic | 35.0% | |
| ACAAAATCGTACATTGGACA+AGG | + | chr4.2:34481348-34481367 | None:intergenic | 35.0% | |
| ACAAATTACAGCATTCACCT+TGG | + | chr4.2:34482612-34482631 | None:intergenic | 35.0% | |
| ACAATCCACATTGCATATCT+AGG | + | chr4.2:34482718-34482737 | None:intergenic | 35.0% | |
| ACAGAAACCAAGACAAAGAT+AGG | + | chr4.2:34483147-34483166 | None:intergenic | 35.0% | |
| ACATAGATAGACCCATTAGA+AGG | + | chr4.2:34480405-34480424 | None:intergenic | 35.0% | |
| ACCGTTGCATAAAAAGTTGA+AGG | + | chr4.2:34483517-34483536 | None:intergenic | 35.0% | |
| AGAAGTTCAAAATAGCCACT+TGG | + | chr4.2:34482757-34482776 | None:intergenic | 35.0% | |
| AGCTCCAATGATAGAACAAA+TGG | + | chr4.2:34483493-34483512 | None:intergenic | 35.0% | |
| AGTAACCCAATTGATGAAAC+TGG | + | chr4.2:34481516-34481535 | None:intergenic | 35.0% | |
| AGTATCCTAGATATGCAATG+TGG | - | chr4.2:34482710-34482729 | MS.gene90948:intron | 35.0% | |
| ATAGGTGTGGCAATATCAAT+TGG | - | chr4.2:34482401-34482420 | MS.gene90948:intron | 35.0% | |
| ATATCACAGACCTTGTATTC+GGG | + | chr4.2:34481051-34481070 | None:intergenic | 35.0% | |
| ATATGATGATCATTGTGAGC+AGG | + | chr4.2:34482915-34482934 | None:intergenic | 35.0% | |
| ATGAGCAAATTATGGCAACA+TGG | + | chr4.2:34484749-34484768 | None:intergenic | 35.0% | |
| ATTTGCAATACAAACAAGCC+TGG | - | chr4.2:34482445-34482464 | MS.gene90948:intron | 35.0% | |
| CAAATAAACCTCACTTTGCA+AGG | + | chr4.2:34480558-34480577 | None:intergenic | 35.0% | |
| CAATTCTTAAAGGTAGAGGA+AGG | + | chr4.2:34483390-34483409 | None:intergenic | 35.0% | |
| CATACAAGATAGATGCAATG+GGG | + | chr4.2:34483649-34483668 | None:intergenic | 35.0% | |
| CATACTCTTGTGAATGAACA+TGG | - | chr4.2:34481651-34481670 | MS.gene90948:intron | 35.0% | |
| CATATCACAGACCTTGTATT+CGG | + | chr4.2:34481052-34481071 | None:intergenic | 35.0% | |
| CCAGTTGTTGTAGCAAATTT+AGG | - | chr4.2:34482109-34482128 | MS.gene90948:intron | 35.0% | |
| CCATACCTTTATAACTCCAA+TGG | + | chr4.2:34480481-34480500 | None:intergenic | 35.0% | |
| CCATTGGAGTTATAAAGGTA+TGG | - | chr4.2:34480478-34480497 | MS.gene90948:CDS | 35.0% | |
| CTATCTTGTATGATGAACCT+GGG | - | chr4.2:34483657-34483676 | MS.gene90948:intron | 35.0% | |
| CTGCTATTGCAGTATATGTT+AGG | + | chr4.2:34480898-34480917 | None:intergenic | 35.0% | |
| CTTGCAAAGTGAGGTTTATT+TGG | - | chr4.2:34480556-34480575 | MS.gene90948:intron | 35.0% | |
| GTAACCCAATTGATGAAACT+GGG | + | chr4.2:34481515-34481534 | None:intergenic | 35.0% | |
| GTACAGGGAAACCTAAAATA+TGG | - | chr4.2:34480714-34480733 | MS.gene90948:intron | 35.0% | |
| GTATCCCTATATATAGAGGT+TGG | + | chr4.2:34483223-34483242 | None:intergenic | 35.0% | |
| GTCAAAGATTTGCACCTTAT+TGG | + | chr4.2:34481978-34481997 | None:intergenic | 35.0% | |
| GTGAAAAATGAGTGATAGTC+TGG | + | chr4.2:34480664-34480683 | None:intergenic | 35.0% | |
| GTTATCATTATGGCTATAGC+GGG | - | chr4.2:34484465-34484484 | MS.gene90948:CDS | 35.0% | |
| TAACAATGTTAGGGAACATG+TGG | + | chr4.2:34484431-34484450 | None:intergenic | 35.0% | |
| TAGGTGTGGCAATATCAATT+GGG | - | chr4.2:34482402-34482421 | MS.gene90948:intron | 35.0% | |
| TATCTTGTATGATGAACCTG+GGG | - | chr4.2:34483658-34483677 | MS.gene90948:intron | 35.0% | |
| TCAATGATGAGATAGAGACA+TGG | + | chr4.2:34483803-34483822 | None:intergenic | 35.0% | |
| TCCGAAATGTTGGAATTTCT+AGG | - | chr4.2:34483883-34483902 | MS.gene90948:intron | 35.0% | |
| TCTATCTTGTATGATGAACC+TGG | - | chr4.2:34483656-34483675 | MS.gene90948:intron | 35.0% | |
| TGCAGAAAGATAAACGTACA+GGG | - | chr4.2:34480699-34480718 | MS.gene90948:intron | 35.0% | |
| TGGAACCATTGGAGTTATAA+AGG | - | chr4.2:34480473-34480492 | MS.gene90948:CDS | 35.0% | |
| TGGCCTTTCCAATTTACATA+AGG | - | chr4.2:34481926-34481945 | MS.gene90948:intron | 35.0% | |
| TGTTTATAATACCGATGGCA+GGG | - | chr4.2:34484914-34484933 | MS.gene90948:intron | 35.0% | |
| TTACAAAGAGCTTGATGAAG+AGG | - | chr4.2:34484044-34484063 | MS.gene90948:intron | 35.0% | |
| TTCAGCCAACATATTATCGT+CGG | + | chr4.2:34480448-34480467 | None:intergenic | 35.0% | |
| TTGCAAAAAGAATGCCGAAA+AGG | + | chr4.2:34484554-34484573 | None:intergenic | 35.0% | |
| TTGCAGAAAGATAAACGTAC+AGG | - | chr4.2:34480698-34480717 | MS.gene90948:intron | 35.0% | |
| TTTGCAATACAAACAAGCCT+GGG | - | chr4.2:34482446-34482465 | MS.gene90948:intron | 35.0% | |
| ! | AGTTTCAGATTGCTGTGTTT+TGG | + | chr4.2:34484234-34484253 | None:intergenic | 35.0% |
| ! | CAAGTTGGCTATATGATATG+GGG | - | chr4.2:34482170-34482189 | MS.gene90948:intron | 35.0% |
| ! | GCAAGTTGGCTATATGATAT+GGG | - | chr4.2:34482169-34482188 | MS.gene90948:intron | 35.0% |
| ! | GGAAAATTTGCTCCTTCTAA+TGG | - | chr4.2:34480390-34480409 | MS.gene90948:CDS | 35.0% |
| ! | TAAGTACTGTATAACAGCCT+CGG | + | chr4.2:34482269-34482288 | None:intergenic | 35.0% |
| ! | TATAGCGGAGTCAAAAAACA+AGG | - | chr4.2:34480868-34480887 | MS.gene90948:intron | 35.0% |
| ! | TATATTTGCTAGTTGCTTGC+CGG | - | chr4.2:34484651-34484670 | MS.gene90948:CDS | 35.0% |
| ! | TGCAAGTTGGCTATATGATA+TGG | - | chr4.2:34482168-34482187 | MS.gene90948:intron | 35.0% |
| ! | TTAGAAGGAGCAAATTTTCC+AGG | + | chr4.2:34480390-34480409 | None:intergenic | 35.0% |
| ! | TTGATGATCACATATCAGAG+TGG | + | chr4.2:34484850-34484869 | None:intergenic | 35.0% |
| ! | TTTTCTTACTGTCAGGATGA+TGG | - | chr4.2:34484164-34484183 | MS.gene90948:CDS | 35.0% |
| !! | AATGTGAACTTTGCTTTTCG+GGG | - | chr4.2:34481171-34481190 | MS.gene90948:intron | 35.0% |
| !! | CCTAAATTTGCTACAACAAC+TGG | + | chr4.2:34482112-34482131 | None:intergenic | 35.0% |
| !! | CGAATGTGAACTTTGCTTTT+CGG | - | chr4.2:34481169-34481188 | MS.gene90948:intron | 35.0% |
| !! | GAATGTGAACTTTGCTTTTC+GGG | - | chr4.2:34481170-34481189 | MS.gene90948:intron | 35.0% |
| !! | TGCCATAATTTGCTCATGTA+AGG | - | chr4.2:34484752-34484771 | MS.gene90948:CDS | 35.0% |
| !!! | CTTCTTTTTTGACATAGGTG+TGG | - | chr4.2:34482388-34482407 | MS.gene90948:intron | 35.0% |
| !!! | GCTGAATATTTTGGAACCAT+TGG | - | chr4.2:34480462-34480481 | MS.gene90948:CDS | 35.0% |
| AAAGCAGTCGAAATAGAGAG+AGG | - | chr4.2:34485037-34485056 | MS.gene90948:CDS | 40.0% | |
| AAGCAGTCGAAATAGAGAGA+GGG | - | chr4.2:34485038-34485057 | MS.gene90948:CDS | 40.0% | |
| AAGTGTGATAGACAATGGGA+AGG | + | chr4.2:34484405-34484424 | None:intergenic | 40.0% | |
| AAGTTCAGTAGATGAGGACA+AGG | + | chr4.2:34482031-34482050 | None:intergenic | 40.0% | |
| ACAATGTTAGGGAACATGTG+GGG | + | chr4.2:34484429-34484448 | None:intergenic | 40.0% | |
| ACAGAAAAAAGCAGAGACAG+AGG | - | chr4.2:34484952-34484971 | MS.gene90948:intron | 40.0% | |
| ACATCACTTTCAGTTTCCTC+TGG | + | chr4.2:34480950-34480969 | None:intergenic | 40.0% | |
| ACGTTGCAAAGTGCAAAATC+AGG | + | chr4.2:34481721-34481740 | None:intergenic | 40.0% | |
| AGATGCTACTGTGACATATG+AGG | - | chr4.2:34480772-34480791 | MS.gene90948:intron | 40.0% | |
| AGTGTGATAGACAATGGGAA+GGG | + | chr4.2:34484404-34484423 | None:intergenic | 40.0% | |
| ATATACTGCAATAGCAGACC+CGG | - | chr4.2:34480901-34480920 | MS.gene90948:intron | 40.0% | |
| ATATTATCGTCGGTCCCATA+AGG | + | chr4.2:34480438-34480457 | None:intergenic | 40.0% | |
| ATATTGTGGAGAAGACCTGT+TGG | + | chr4.2:34483442-34483461 | None:intergenic | 40.0% | |
| ATCAGACAACGGAAAGAATG+TGG | + | chr4.2:34481381-34481400 | None:intergenic | 40.0% | |
| ATGTCTGCAACTTGCCTTAT+GGG | - | chr4.2:34480421-34480440 | MS.gene90948:CDS | 40.0% | |
| ATTGTACACCGTTGGAACTT+GGG | - | chr4.2:34482138-34482157 | MS.gene90948:intron | 40.0% | |
| CAAAGAGACGAATGAACCAA+AGG | - | chr4.2:34480748-34480767 | MS.gene90948:intron | 40.0% | |
| CAAGGTCTGTGATATGAGAT+TGG | - | chr4.2:34481056-34481075 | MS.gene90948:intron | 40.0% | |
| CCTAGCTTAGAGGTGAAAAT+AGG | + | chr4.2:34483711-34483730 | None:intergenic | 40.0% | |
| CTCTTTATCAATGCTCCAAC+AGG | - | chr4.2:34483424-34483443 | MS.gene90948:intron | 40.0% | |
| CTGTTTATAATACCGATGGC+AGG | - | chr4.2:34484913-34484932 | MS.gene90948:intron | 40.0% | |
| GAAACTGAAAGTGATGTCGA+TGG | - | chr4.2:34480953-34480972 | MS.gene90948:intron | 40.0% | |
| GCAATATCAATTGGGCAAAG+CGG | - | chr4.2:34482410-34482429 | MS.gene90948:intron | 40.0% | |
| GCTATATGATATGGGGCTTA+TGG | - | chr4.2:34482177-34482196 | MS.gene90948:intron | 40.0% | |
| GCTCTGCTTAACTGAACATT+AGG | - | chr4.2:34482243-34482262 | MS.gene90948:intron | 40.0% | |
| GGTGAGCTGTATGATGAATT+TGG | - | chr4.2:34484185-34484204 | MS.gene90948:CDS | 40.0% | |
| GTTGCCCAGTTTCATCAATT+GGG | - | chr4.2:34481508-34481527 | MS.gene90948:intron | 40.0% | |
| TATGTCTGCAACTTGCCTTA+TGG | - | chr4.2:34480420-34480439 | MS.gene90948:CDS | 40.0% | |
| TATTATGTTGGACGTAGTGC+TGG | - | chr4.2:34481553-34481572 | MS.gene90948:intron | 40.0% | |
| TCAGACAACGGAAAGAATGT+GGG | + | chr4.2:34481380-34481399 | None:intergenic | 40.0% | |
| TCTGTTGAAGTCATGTGGTT+TGG | - | chr4.2:34483162-34483181 | MS.gene90948:intron | 40.0% | |
| TGCCGCAAAATCACATACAT+CGG | + | chr4.2:34482981-34483000 | None:intergenic | 40.0% | |
| TGGAATTGATCTGCATGATG+TGG | - | chr4.2:34482305-34482324 | MS.gene90948:intron | 40.0% | |
| TGGCACGGAATTTCTTCTTA+AGG | + | chr4.2:34484214-34484233 | None:intergenic | 40.0% | |
| TGGTTTCTGTTGAAGTCATG+TGG | - | chr4.2:34483157-34483176 | MS.gene90948:intron | 40.0% | |
| TTCCAACATTTCGGATTTGG+AGG | + | chr4.2:34483878-34483897 | None:intergenic | 40.0% | |
| TTCCTCCAAATCCGAAATGT+TGG | - | chr4.2:34483873-34483892 | MS.gene90948:intron | 40.0% | |
| TTCTCTGCTCTCCATCATAA+CGG | + | chr4.2:34484993-34485012 | None:intergenic | 40.0% | |
| TTGAAGAAACTAAACGTCGC+AGG | - | chr4.2:34484070-34484089 | MS.gene90948:intron | 40.0% | |
| TTGCAAAGTGCAAAATCAGG+AGG | + | chr4.2:34481718-34481737 | None:intergenic | 40.0% | |
| TTGCTTGAGTGCAAATCTAG+TGG | - | chr4.2:34481906-34481925 | MS.gene90948:intron | 40.0% | |
| ! | AGTGATGTCGATGGTGTTAA+TGG | - | chr4.2:34480962-34480981 | MS.gene90948:intron | 40.0% |
| ! | CCTATTTTCACCTCTAAGCT+AGG | - | chr4.2:34483708-34483727 | MS.gene90948:intron | 40.0% |
| ! | GATTTTGCACTTTGCAACGT+TGG | - | chr4.2:34481721-34481740 | MS.gene90948:intron | 40.0% |
| ! | GGGAAAGTGTGATAGACAAT+GGG | + | chr4.2:34484409-34484428 | None:intergenic | 40.0% |
| ! | TATGCAATGTGGATTGTCAG+CGG | - | chr4.2:34482721-34482740 | MS.gene90948:intron | 40.0% |
| ! | TCTGTCTCTTTTGTCCTTGT+GGG | - | chr4.2:34482059-34482078 | MS.gene90948:intron | 40.0% |
| ! | TGCCGATGTATGTGATTTTG+CGG | - | chr4.2:34482976-34482995 | MS.gene90948:intron | 40.0% |
| ! | TTCGGCATTCTTTTTGCAAC+TGG | - | chr4.2:34484555-34484574 | MS.gene90948:CDS | 40.0% |
| ! | TTTTCTGTCCTTGCAAAGTG+AGG | - | chr4.2:34480547-34480566 | MS.gene90948:intron | 40.0% |
| !! | AGCATTGATAAAGAGAGTGG+AGG | + | chr4.2:34483419-34483438 | None:intergenic | 40.0% |
| !! | GTGGCAGTTGATTTTGCATT+TGG | - | chr4.2:34482084-34482103 | MS.gene90948:intron | 40.0% |
| !! | TGGAGCATTGATAAAGAGAG+TGG | + | chr4.2:34483422-34483441 | None:intergenic | 40.0% |
| AAGAAACTAAACGTCGCAGG+CGG | - | chr4.2:34484073-34484092 | MS.gene90948:intron | 45.0% | |
| ACAGGGATTATGGACGAGAA+CGG | - | chr4.2:34485079-34485098 | MS.gene90948:CDS | 45.0% | |
| ACTACACTCCCAAGTTCCAA+CGG | + | chr4.2:34482149-34482168 | None:intergenic | 45.0% | |
| AGACAGAGGAAGAGAGTCAA+GGG | - | chr4.2:34484966-34484985 | MS.gene90948:intron | 45.0% | |
| AGAGATCGAGACAGGGATTA+TGG | - | chr4.2:34485069-34485088 | MS.gene90948:CDS | 45.0% | |
| AGCAAACCATGGCAACAAGA+GGG | - | chr4.2:34481013-34481032 | MS.gene90948:intron | 45.0% | |
| ATGCAAAAGGGGACGCAATT+TGG | + | chr4.2:34481792-34481811 | None:intergenic | 45.0% | |
| ATTAGTGACACCTCTGATGC+AGG | - | chr4.2:34482529-34482548 | MS.gene90948:intron | 45.0% | |
| ATTGGACAAGGCCAGTCATT+GGG | + | chr4.2:34481336-34481355 | None:intergenic | 45.0% | |
| ATTGGATGTGCCCGAATACA+AGG | - | chr4.2:34481038-34481057 | MS.gene90948:intron | 45.0% | |
| CACAAGGACAAAAGAGACAG+AGG | + | chr4.2:34482060-34482079 | None:intergenic | 45.0% | |
| CAGACAACGGAAAGAATGTG+GGG | + | chr4.2:34481379-34481398 | None:intergenic | 45.0% | |
| CGTTGCCCAGTTTCATCAAT+TGG | - | chr4.2:34481507-34481526 | MS.gene90948:intron | 45.0% | |
| CTTAACTGAACATTAGGCCG+AGG | - | chr4.2:34482249-34482268 | MS.gene90948:intron | 45.0% | |
| GATGCAATGGGGATGAATAC+AGG | + | chr4.2:34483638-34483657 | None:intergenic | 45.0% | |
| GATTGTACACCGTTGGAACT+TGG | - | chr4.2:34482137-34482156 | MS.gene90948:intron | 45.0% | |
| GCACACAAAACCTAGCTTAG+AGG | + | chr4.2:34483721-34483740 | None:intergenic | 45.0% | |
| GGAAGCAATCATCATGTGAG+AGG | - | chr4.2:34481883-34481902 | MS.gene90948:intron | 45.0% | |
| GGACTAAGATTGTACACCGT+TGG | - | chr4.2:34482130-34482149 | MS.gene90948:intron | 45.0% | |
| GGTTTGGCCTATCTTTGTCT+TGG | - | chr4.2:34483137-34483156 | MS.gene90948:intron | 45.0% | |
| GTGTGATAGACAATGGGAAG+GGG | + | chr4.2:34484403-34484422 | None:intergenic | 45.0% | |
| TCGAAATAGAGAGAGGGACA+GGG | - | chr4.2:34485044-34485063 | MS.gene90948:CDS | 45.0% | |
| TGGGACCGACGATAATATGT+TGG | - | chr4.2:34480440-34480459 | MS.gene90948:CDS | 45.0% | |
| TGTAGTTTCACCTGCATCAG+AGG | + | chr4.2:34482542-34482561 | None:intergenic | 45.0% | |
| TGTGATAGACAATGGGAAGG+GGG | + | chr4.2:34484402-34484421 | None:intergenic | 45.0% | |
| TTGATGCTTCCAGCAAACCA+TGG | - | chr4.2:34481002-34481021 | MS.gene90948:intron | 45.0% | |
| ! | CTCTGTCTCTTTTGTCCTTG+TGG | - | chr4.2:34482058-34482077 | MS.gene90948:intron | 45.0% |
| ! | GAGAAACAGAGAGCATAACG+AGG | - | chr4.2:34485008-34485027 | MS.gene90948:CDS | 45.0% |
| ! | GCATATCTAGGATACTGACC+CGG | + | chr4.2:34482706-34482725 | None:intergenic | 45.0% |
| ! | GGGGAAAGTGTGATAGACAA+TGG | + | chr4.2:34484410-34484429 | None:intergenic | 45.0% |
| ! | GTCGATGGTGTTAATGGAAG+AGG | - | chr4.2:34480968-34480987 | MS.gene90948:intron | 45.0% |
| !! | CTTTGTTGTTAACCTCTCCC+CGG | - | chr4.2:34481997-34482016 | MS.gene90948:intron | 45.0% |
| !! | TCTTTTGTCCTTGTGGGTTG+TGG | - | chr4.2:34482065-34482084 | MS.gene90948:intron | 45.0% |
| !! | TTTGTTGTTAACCTCTCCCC+GGG | - | chr4.2:34481998-34482017 | MS.gene90948:intron | 45.0% |
| !!! | CAGATTGCTGTGTTTTGGCA+CGG | + | chr4.2:34484229-34484248 | None:intergenic | 45.0% |
| !! | TAAAAAATAAATAAAAACTA+GGG | + | chr4.2:34482659-34482678 | None:intergenic | 5.0% |
| !! | TAATTATAATTATAATTGAA+CGG | + | chr4.2:34482780-34482799 | None:intergenic | 5.0% |
| !! | TTAAAAAATAAATAAAAACT+AGG | + | chr4.2:34482660-34482679 | None:intergenic | 5.0% |
| !!! | GTTTTTATTTATTTTTTAAT+TGG | - | chr4.2:34482661-34482680 | MS.gene90948:intron | 5.0% |
| AAACCACTCAACAGCAGCCA+CGG | + | chr4.2:34480810-34480829 | None:intergenic | 50.0% | |
| AACCTGGGGTGCATAAACTC+TGG | - | chr4.2:34483672-34483691 | MS.gene90948:intron | 50.0% | |
| ACGTCAGTACCAGCAACAAC+CGG | + | chr4.2:34480923-34480942 | None:intergenic | 50.0% | |
| AGGACCATCAAACTCGAGTC+CGG | + | chr4.2:34484673-34484692 | None:intergenic | 50.0% | |
| ATCAACTGCCACAACCCACA+AGG | + | chr4.2:34482076-34482095 | None:intergenic | 50.0% | |
| CAAGTGGAGAGTCCCGTTTA+TGG | - | chr4.2:34482838-34482857 | MS.gene90948:intron | 50.0% | |
| CAGCAAACCATGGCAACAAG+AGG | - | chr4.2:34481012-34481031 | MS.gene90948:intron | 50.0% | |
| CAGGGATTATGGACGAGAAC+GGG | - | chr4.2:34485080-34485099 | MS.gene90948:CDS | 50.0% | |
| CATAAACGGGACTCTCCACT+TGG | + | chr4.2:34482840-34482859 | None:intergenic | 50.0% | |
| CATTGGACAAGGCCAGTCAT+TGG | + | chr4.2:34481337-34481356 | None:intergenic | 50.0% | |
| CGAAATAGAGAGAGGGACAG+GGG | - | chr4.2:34485045-34485064 | MS.gene90948:CDS | 50.0% | |
| GAGACAGAGGAAGAGAGTCA+AGG | - | chr4.2:34484965-34484984 | MS.gene90948:intron | 50.0% | |
| GAGTCAAGGGACCGTTATGA+TGG | - | chr4.2:34484979-34484998 | MS.gene90948:intron | 50.0% | |
| GGCTATTTGGTCCCAATGAC+TGG | - | chr4.2:34481322-34481341 | MS.gene90948:intron | 50.0% | |
| GGTGTTAATGGAAGAGGCAG+AGG | - | chr4.2:34480974-34480993 | MS.gene90948:intron | 50.0% | |
| GTCACAGTAGCATCTCCCTT+TGG | + | chr4.2:34480767-34480786 | None:intergenic | 50.0% | |
| GTCGAAATAGAGAGAGGGAC+AGG | - | chr4.2:34485043-34485062 | MS.gene90948:CDS | 50.0% | |
| TACCAGAGTTTATGCACCCC+AGG | + | chr4.2:34483677-34483696 | None:intergenic | 50.0% | |
| TCTCTGTCAATCCCTGCCAT+CGG | + | chr4.2:34484928-34484947 | None:intergenic | 50.0% | |
| TGGATTGTCAGCGGTAGGAT+AGG | - | chr4.2:34482730-34482749 | MS.gene90948:intron | 50.0% | |
| ! | ACAGAGAGCATAACGAGGAG+AGG | - | chr4.2:34485013-34485032 | MS.gene90948:CDS | 50.0% |
| ! | CAATGTGGATTGTCAGCGGT+AGG | - | chr4.2:34482725-34482744 | MS.gene90948:intron | 50.0% |
| ! | CTCTTGTTGCCATGGTTTGC+TGG | + | chr4.2:34481014-34481033 | None:intergenic | 50.0% |
| ! | CTTGGGAGTGTAGTGCAAGT+TGG | - | chr4.2:34482155-34482174 | MS.gene90948:intron | 50.0% |
| !! | GTTGTTGCTGGTACTGACGT+CGG | - | chr4.2:34480923-34480942 | MS.gene90948:intron | 50.0% |
| AAACAAGCCTGGGCACAACG+AGG | - | chr4.2:34482456-34482475 | MS.gene90948:intron | 55.0% | |
| AACAAGCCTGGGCACAACGA+GGG | - | chr4.2:34482457-34482476 | MS.gene90948:intron | 55.0% | |
| ACAGGGGAAGAGATCGAGAC+AGG | - | chr4.2:34485061-34485080 | MS.gene90948:CDS | 55.0% | |
| AGCGGTAGGATAGGACCAAG+TGG | - | chr4.2:34482739-34482758 | MS.gene90948:intron | 55.0% | |
| ATAGCAGACCCGGTTGTTGC+TGG | - | chr4.2:34480911-34480930 | MS.gene90948:intron | 55.0% | |
| CAATCGCCCTCTTGTTGCCA+TGG | + | chr4.2:34481022-34481041 | None:intergenic | 55.0% | |
| CACGAGTGCTTCCTGGTTCA+GGG | - | chr4.2:34484255-34484274 | MS.gene90948:CDS | 55.0% | |
| CAGGGGAAGAGATCGAGACA+GGG | - | chr4.2:34485062-34485081 | MS.gene90948:CDS | 55.0% | |
| CATGGCAACAAGAGGGCGAT+TGG | - | chr4.2:34481020-34481039 | MS.gene90948:intron | 55.0% | |
| CGTCAGTACCAGCAACAACC+GGG | + | chr4.2:34480922-34480941 | None:intergenic | 55.0% | |
| CTTGCCGGACTCGAGTTTGA+TGG | - | chr4.2:34484666-34484685 | MS.gene90948:CDS | 55.0% | |
| GAAACTGCACGAGTGCTTCC+TGG | - | chr4.2:34484248-34484267 | MS.gene90948:CDS | 55.0% | |
| GGTGCAACTGCAGGGCTATT+TGG | - | chr4.2:34481309-34481328 | MS.gene90948:intron | 55.0% | |
| GGTTGGGAGGTTGAGGATCT+AGG | - | chr4.2:34484284-34484303 | MS.gene90948:CDS | 55.0% | |
| TGAGGACAAGGACCAGAACC+CGG | + | chr4.2:34482019-34482038 | None:intergenic | 55.0% | |
| TTAAACAGAGGAGGGCGAGC+TGG | - | chr4.2:34484018-34484037 | MS.gene90948:intron | 55.0% | |
| AGGACAAGGACCAGAACCCG+GGG | + | chr4.2:34482017-34482036 | None:intergenic | 60.0% | |
| CTGCAGTTGCACCAGCTGGA+CGG | + | chr4.2:34481302-34481321 | None:intergenic | 60.0% | |
| GAGGACAAGGACCAGAACCC+GGG | + | chr4.2:34482018-34482037 | None:intergenic | 60.0% | |
| GCACGAGTGCTTCCTGGTTC+AGG | - | chr4.2:34484254-34484273 | MS.gene90948:CDS | 60.0% | |
| GGCACAACGAGGGTGGTGTA+AGG | - | chr4.2:34482467-34482486 | MS.gene90948:intron | 60.0% | |
| GTCCAGCTGGTGCAACTGCA+GGG | - | chr4.2:34481301-34481320 | MS.gene90948:CDS | 60.0% | |
| GTTAACCTCTCCCCGGGTTC+TGG | - | chr4.2:34482004-34482023 | MS.gene90948:intron | 60.0% | |
| TGAGGATCCACATGCTGCCG+TGG | - | chr4.2:34480790-34480809 | MS.gene90948:intron | 60.0% | |
| ! | ACGTTCTGGGCCAGATGCAG+GGG | - | chr4.2:34481269-34481288 | MS.gene90948:CDS | 60.0% |
| ! | GACGTTCTGGGCCAGATGCA+GGG | - | chr4.2:34481268-34481287 | MS.gene90948:CDS | 60.0% |
| !! | CAACGCCAGAAGCACCAGCA+GGG | + | chr4.2:34481224-34481243 | None:intergenic | 60.0% |
| !! | TGGTACTGACGTCGGACCAG+AGG | - | chr4.2:34480931-34480950 | MS.gene90948:intron | 60.0% |
| !! | TGGTTCAGGGCGTGCTGGTT+GGG | - | chr4.2:34484268-34484287 | MS.gene90948:CDS | 60.0% |
| AACAGAGGAGGGCGAGCTGG+AGG | - | chr4.2:34484021-34484040 | MS.gene90948:intron | 65.0% | |
| AAGCCTGGGCACAACGAGGG+TGG | - | chr4.2:34482460-34482479 | MS.gene90948:intron | 65.0% | |
| AAGGACCAGAACCCGGGGAG+AGG | + | chr4.2:34482012-34482031 | None:intergenic | 65.0% | |
| ACACCACCCTCGTTGTGCCC+AGG | + | chr4.2:34482466-34482485 | None:intergenic | 65.0% | |
| ACAGCAGCCACGGCAGCATG+TGG | + | chr4.2:34480800-34480819 | None:intergenic | 65.0% | |
| AGCCCTGCAGTTGCACCAGC+TGG | + | chr4.2:34481306-34481325 | None:intergenic | 65.0% | |
| CAACCAGCACGCCCTGAACC+AGG | + | chr4.2:34484269-34484288 | None:intergenic | 65.0% | |
| CGGCCAATACCCCCTGCATC+TGG | + | chr4.2:34481282-34481301 | None:intergenic | 65.0% | |
| CGGGGTGCGTGTAATCGCTG+TGG | - | chr4.2:34481189-34481208 | MS.gene90948:intron | 65.0% | |
| CGTCCAGCTGGTGCAACTGC+AGG | - | chr4.2:34481300-34481319 | MS.gene90948:CDS | 65.0% | |
| CTGCCGTGGCTGCTGTTGAG+TGG | - | chr4.2:34480804-34480823 | MS.gene90948:intron | 65.0% | |
| CTTCCTGGTTCAGGGCGTGC+TGG | - | chr4.2:34484263-34484282 | MS.gene90948:CDS | 65.0% | |
| GCTGGTGCTTCTGGCGTTGC+AGG | - | chr4.2:34481225-34481244 | MS.gene90948:CDS | 65.0% | |
| GCTTCTGGCGTTGCAGGAGG+AGG | - | chr4.2:34481231-34481250 | MS.gene90948:CDS | 65.0% | |
| GGTGCTTCTGGCGTTGCAGG+AGG | - | chr4.2:34481228-34481247 | MS.gene90948:CDS | 65.0% | |
| TCTGGCGTTGCAGGAGGAGG+TGG | - | chr4.2:34481234-34481253 | MS.gene90948:CDS | 65.0% | |
| ! | CGTTCTGGGCCAGATGCAGG+GGG | - | chr4.2:34481270-34481289 | MS.gene90948:CDS | 65.0% |
| ! | CTGGTTCAGGGCGTGCTGGT+TGG | - | chr4.2:34484267-34484286 | MS.gene90948:CDS | 65.0% |
| ! | GGACGTTCTGGGCCAGATGC+AGG | - | chr4.2:34481267-34481286 | MS.gene90948:CDS | 65.0% |
| ! | GGGCCAGATGCAGGGGGTAT+TGG | - | chr4.2:34481276-34481295 | MS.gene90948:CDS | 65.0% |
| ! | TGTGGAAGTGCACGCCCTGC+TGG | - | chr4.2:34481207-34481226 | MS.gene90948:CDS | 65.0% |
| !! | GCAACGCCAGAAGCACCAGC+AGG | + | chr4.2:34481225-34481244 | None:intergenic | 65.0% |
| !! | GCGTGCTGGTTGGGAGGTTG+AGG | - | chr4.2:34484277-34484296 | MS.gene90948:CDS | 65.0% |
| !! | TTCAGGGCGTGCTGGTTGGG+AGG | - | chr4.2:34484271-34484290 | MS.gene90948:CDS | 65.0% |
| AGGAGGAGGTGGCCGTGGCA+GGG | - | chr4.2:34481245-34481264 | MS.gene90948:CDS | 70.0% | |
| GCACGCCCTGCTGGTGCTTC+TGG | - | chr4.2:34481216-34481235 | MS.gene90948:CDS | 70.0% | |
| GCCCAGAACGTCCCCTGCCA+CGG | + | chr4.2:34481260-34481279 | None:intergenic | 70.0% | |
| GCCGTGGCAGGGGACGTTCT+GGG | - | chr4.2:34481256-34481275 | MS.gene90948:CDS | 70.0% | |
| GTTGCAGGAGGAGGTGGCCG+TGG | - | chr4.2:34481240-34481259 | MS.gene90948:CDS | 70.0% | |
| !! | GGGGGTATTGGCCGTCCAGC+TGG | - | chr4.2:34481288-34481307 | MS.gene90948:CDS | 70.0% |
| CAGGAGGAGGTGGCCGTGGC+AGG | - | chr4.2:34481244-34481263 | MS.gene90948:CDS | 75.0% | |
| GGAGGAGGTGGCCGTGGCAG+GGG | - | chr4.2:34481246-34481265 | MS.gene90948:CDS | 75.0% | |
| GGCCGTGGCAGGGGACGTTC+TGG | - | chr4.2:34481255-34481274 | MS.gene90948:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 34480375 | 34485125 | 34480375 | ID=MS.gene90948 |
| chr4.2 | mRNA | 34480375 | 34485125 | 34480375 | ID=MS.gene90948.t1;Parent=MS.gene90948 |
| chr4.2 | exon | 34485006 | 34485125 | 34485006 | ID=MS.gene90948.t1.exon1;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34485006 | 34485125 | 34485006 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34484441 | 34484796 | 34484441 | ID=MS.gene90948.t1.exon2;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34484441 | 34484796 | 34484441 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34484145 | 34484336 | 34484145 | ID=MS.gene90948.t1.exon3;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34484145 | 34484336 | 34484145 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34483012 | 34483095 | 34483012 | ID=MS.gene90948.t1.exon4;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34483012 | 34483095 | 34483012 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34481396 | 34481474 | 34481396 | ID=MS.gene90948.t1.exon5;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34481396 | 34481474 | 34481396 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34481195 | 34481321 | 34481195 | ID=MS.gene90948.t1.exon6;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34481195 | 34481321 | 34481195 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| chr4.2 | exon | 34480375 | 34480565 | 34480375 | ID=MS.gene90948.t1.exon7;Parent=MS.gene90948.t1 |
| chr4.2 | CDS | 34480375 | 34480565 | 34480375 | ID=cds.MS.gene90948.t1;Parent=MS.gene90948.t1 |
| Gene Sequence |
| Protein sequence |
