Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91133.t1 | XP_003589787.2 | 98.8 | 326 | 4 | 0 | 1 | 326 | 144 | 469 | 3.40E-187 | 664.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91133.t1 | Q9LHE3 | 70.6 | 326 | 95 | 1 | 1 | 326 | 146 | 470 | 1.0e-139 | 497.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91133.t1 | G7ICI5 | 98.8 | 326 | 4 | 0 | 1 | 326 | 144 | 469 | 2.4e-187 | 664.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050667 | MS.gene91133 | 0.812786 | 3.56E-51 | -1.69E-46 |
| MS.gene052143 | MS.gene91133 | 0.832914 | 7.20E-56 | -1.69E-46 |
| MS.gene052169 | MS.gene91133 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene91133 | 0.844593 | 6.87E-59 | -1.69E-46 |
| MS.gene052367 | MS.gene91133 | 0.820309 | 7.34E-53 | -1.69E-46 |
| MS.gene053173 | MS.gene91133 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene053283 | MS.gene91133 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene91133 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene054614 | MS.gene91133 | 0.849289 | 3.56E-60 | -1.69E-46 |
| MS.gene054662 | MS.gene91133 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene91133 | 0.831074 | 2.05E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene91133 | 0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene91133 | 0.801253 | 9.82E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene91133 | 0.827587 | 1.44E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene91133 | 0.824286 | 8.76E-54 | -1.69E-46 |
| MS.gene057367 | MS.gene91133 | 0.810019 | 1.42E-50 | -1.69E-46 |
| MS.gene057669 | MS.gene91133 | 0.803842 | 2.87E-49 | -1.69E-46 |
| MS.gene058849 | MS.gene91133 | 0.808584 | 2.88E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene91133 | 0.833726 | 4.52E-56 | -1.69E-46 |
| MS.gene059616 | MS.gene91133 | 0.823616 | 1.26E-53 | -1.69E-46 |
| MS.gene06093 | MS.gene91133 | 0.82353 | 1.32E-53 | -1.69E-46 |
| MS.gene061260 | MS.gene91133 | 0.800738 | 1.25E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91133.t1 | MTR_1g039270 | 98.773 | 326 | 4 | 0 | 1 | 326 | 144 | 469 | 0.0 | 658 |
| MS.gene91133.t1 | MTR_1g115210 | 74.540 | 326 | 82 | 1 | 1 | 326 | 162 | 486 | 6.63e-173 | 489 |
| MS.gene91133.t1 | MTR_1g111350 | 51.840 | 326 | 152 | 3 | 1 | 326 | 147 | 467 | 1.70e-108 | 324 |
| MS.gene91133.t1 | MTR_7g117430 | 49.544 | 329 | 162 | 4 | 1 | 326 | 157 | 484 | 5.75e-99 | 300 |
| MS.gene91133.t1 | MTR_6g085010 | 47.095 | 327 | 165 | 5 | 1 | 326 | 172 | 491 | 9.20e-96 | 292 |
| MS.gene91133.t1 | MTR_3g097150 | 40.653 | 337 | 179 | 11 | 2 | 326 | 119 | 446 | 2.88e-76 | 241 |
| MS.gene91133.t1 | MTR_8g103880 | 37.383 | 321 | 195 | 4 | 1 | 319 | 132 | 448 | 1.16e-74 | 237 |
| MS.gene91133.t1 | MTR_4g007740 | 35.988 | 339 | 197 | 5 | 1 | 326 | 146 | 477 | 1.28e-66 | 217 |
| MS.gene91133.t1 | MTR_5g080890 | 36.471 | 340 | 190 | 11 | 2 | 326 | 103 | 431 | 4.62e-63 | 206 |
| MS.gene91133.t1 | MTR_8g096990 | 35.988 | 339 | 191 | 13 | 2 | 326 | 103 | 429 | 8.80e-63 | 205 |
| MS.gene91133.t1 | MTR_5g080960 | 36.765 | 340 | 189 | 11 | 2 | 326 | 103 | 431 | 9.34e-63 | 205 |
| MS.gene91133.t1 | MTR_5g044770 | 35.503 | 338 | 193 | 11 | 2 | 326 | 103 | 428 | 6.79e-61 | 201 |
| MS.gene91133.t1 | MTR_3g046300 | 33.898 | 354 | 198 | 7 | 1 | 326 | 113 | 458 | 2.12e-59 | 197 |
| MS.gene91133.t1 | MTR_3g053710 | 37.243 | 341 | 192 | 9 | 1 | 326 | 133 | 466 | 1.22e-58 | 196 |
| MS.gene91133.t1 | MTR_3g053980 | 39.881 | 336 | 184 | 9 | 1 | 326 | 158 | 485 | 1.73e-56 | 190 |
| MS.gene91133.t1 | MTR_8g038280 | 33.431 | 341 | 201 | 12 | 2 | 326 | 103 | 433 | 2.65e-54 | 183 |
| MS.gene91133.t1 | MTR_6g090290 | 35.588 | 340 | 196 | 11 | 2 | 326 | 103 | 434 | 1.78e-52 | 179 |
| MS.gene91133.t1 | MTR_2g105300 | 31.832 | 333 | 203 | 14 | 6 | 323 | 56 | 379 | 4.81e-52 | 176 |
| MS.gene91133.t1 | MTR_5g091130 | 33.333 | 348 | 209 | 7 | 1 | 326 | 207 | 553 | 1.03e-50 | 176 |
| MS.gene91133.t1 | MTR_2g067830 | 31.858 | 339 | 207 | 14 | 3 | 326 | 75 | 404 | 2.30e-50 | 172 |
| MS.gene91133.t1 | MTR_2g028190 | 32.945 | 343 | 204 | 12 | 1 | 326 | 118 | 451 | 3.56e-50 | 173 |
| MS.gene91133.t1 | MTR_2g059460 | 33.626 | 342 | 193 | 13 | 4 | 326 | 78 | 404 | 2.50e-49 | 169 |
| MS.gene91133.t1 | MTR_4g109760 | 35.362 | 345 | 186 | 13 | 1 | 326 | 70 | 396 | 2.51e-49 | 169 |
| MS.gene91133.t1 | MTR_3g028120 | 31.953 | 338 | 210 | 10 | 2 | 326 | 106 | 436 | 7.76e-48 | 166 |
| MS.gene91133.t1 | MTR_6g088760 | 32.362 | 309 | 181 | 12 | 3 | 293 | 106 | 404 | 2.59e-47 | 167 |
| MS.gene91133.t1 | MTR_8g038250 | 33.430 | 344 | 177 | 16 | 2 | 326 | 103 | 413 | 6.99e-47 | 163 |
| MS.gene91133.t1 | MTR_2g059490 | 32.743 | 339 | 207 | 13 | 3 | 326 | 76 | 408 | 1.03e-46 | 164 |
| MS.gene91133.t1 | MTR_8g038310 | 32.733 | 333 | 189 | 12 | 3 | 326 | 105 | 411 | 4.21e-46 | 161 |
| MS.gene91133.t1 | MTR_5g008110 | 32.448 | 339 | 206 | 11 | 2 | 326 | 84 | 413 | 2.99e-45 | 159 |
| MS.gene91133.t1 | MTR_5g008150 | 31.977 | 344 | 200 | 12 | 3 | 326 | 81 | 410 | 6.77e-45 | 158 |
| MS.gene91133.t1 | MTR_0036s0070 | 31.548 | 336 | 201 | 12 | 2 | 326 | 107 | 424 | 1.80e-44 | 157 |
| MS.gene91133.t1 | MTR_0036s0110 | 30.548 | 347 | 202 | 14 | 2 | 326 | 111 | 440 | 7.49e-44 | 156 |
| MS.gene91133.t1 | MTR_5g038360 | 30.588 | 340 | 211 | 14 | 2 | 326 | 105 | 434 | 1.77e-43 | 155 |
| MS.gene91133.t1 | MTR_2g055840 | 31.624 | 351 | 209 | 12 | 1 | 326 | 29 | 373 | 6.91e-43 | 152 |
| MS.gene91133.t1 | MTR_0036s0050 | 30.233 | 344 | 204 | 12 | 2 | 326 | 107 | 433 | 2.82e-41 | 149 |
| MS.gene91133.t1 | MTR_5g008070 | 33.038 | 339 | 201 | 12 | 2 | 326 | 98 | 424 | 1.89e-40 | 147 |
| MS.gene91133.t1 | MTR_0024s0040 | 29.882 | 338 | 213 | 12 | 3 | 326 | 81 | 408 | 1.78e-39 | 144 |
| MS.gene91133.t1 | MTR_1g037630 | 33.036 | 336 | 200 | 9 | 1 | 326 | 108 | 428 | 4.93e-39 | 143 |
| MS.gene91133.t1 | MTR_3g014290 | 33.036 | 336 | 200 | 9 | 1 | 326 | 96 | 416 | 8.44e-39 | 142 |
| MS.gene91133.t1 | MTR_5g044570 | 29.129 | 333 | 199 | 11 | 2 | 326 | 106 | 409 | 1.08e-37 | 139 |
| MS.gene91133.t1 | MTR_3g100500 | 33.432 | 338 | 200 | 13 | 1 | 326 | 113 | 437 | 1.48e-37 | 139 |
| MS.gene91133.t1 | MTR_4g045857 | 38.384 | 198 | 110 | 6 | 4 | 189 | 77 | 274 | 2.84e-37 | 135 |
| MS.gene91133.t1 | MTR_8g039540 | 33.333 | 333 | 204 | 9 | 1 | 326 | 112 | 433 | 3.41e-36 | 135 |
| MS.gene91133.t1 | MTR_2g070430 | 29.640 | 361 | 205 | 12 | 1 | 324 | 103 | 451 | 8.59e-34 | 129 |
| MS.gene91133.t1 | MTR_1g060750 | 28.698 | 338 | 201 | 14 | 10 | 326 | 56 | 374 | 9.40e-33 | 125 |
| MS.gene91133.t1 | MTR_3g068000 | 29.155 | 367 | 205 | 16 | 1 | 326 | 89 | 441 | 2.19e-28 | 114 |
| MS.gene91133.t1 | MTR_5g008090 | 30.164 | 305 | 183 | 10 | 40 | 326 | 20 | 312 | 4.42e-28 | 111 |
| MS.gene91133.t1 | MTR_4g100990 | 27.157 | 394 | 206 | 18 | 1 | 326 | 90 | 470 | 1.20e-26 | 109 |
| MS.gene91133.t1 | MTR_7g105850 | 28.150 | 373 | 208 | 15 | 1 | 326 | 106 | 465 | 3.53e-26 | 108 |
| MS.gene91133.t1 | MTR_7g102750 | 25.714 | 350 | 226 | 12 | 3 | 326 | 99 | 440 | 6.44e-26 | 107 |
| MS.gene91133.t1 | MTR_7g102750 | 26.462 | 325 | 205 | 12 | 3 | 301 | 99 | 415 | 1.83e-25 | 106 |
| MS.gene91133.t1 | MTR_5g012490 | 26.098 | 387 | 217 | 16 | 1 | 326 | 91 | 469 | 4.78e-25 | 105 |
| MS.gene91133.t1 | MTR_5g016260 | 25.434 | 346 | 220 | 14 | 1 | 326 | 104 | 431 | 8.93e-25 | 105 |
| MS.gene91133.t1 | MTR_5g016260 | 25.434 | 346 | 220 | 14 | 1 | 326 | 104 | 431 | 2.03e-24 | 104 |
| MS.gene91133.t1 | MTR_4g095270 | 24.566 | 346 | 223 | 13 | 1 | 326 | 96 | 423 | 2.32e-24 | 103 |
| MS.gene91133.t1 | MTR_4g095270 | 24.566 | 346 | 223 | 13 | 1 | 326 | 96 | 423 | 4.47e-24 | 103 |
| MS.gene91133.t1 | MTR_2g084550 | 28.144 | 334 | 193 | 17 | 3 | 303 | 95 | 414 | 5.61e-24 | 102 |
| MS.gene91133.t1 | MTR_7g062360 | 28.453 | 362 | 212 | 18 | 1 | 326 | 75 | 425 | 1.58e-23 | 100 |
| MS.gene91133.t1 | MTR_8g094590 | 25.779 | 353 | 214 | 15 | 3 | 326 | 91 | 424 | 1.05e-22 | 98.2 |
| MS.gene91133.t1 | MTR_2g063110 | 27.829 | 327 | 214 | 12 | 19 | 326 | 185 | 508 | 1.40e-22 | 98.6 |
| MS.gene91133.t1 | MTR_4g056420 | 28.443 | 334 | 191 | 18 | 3 | 303 | 95 | 413 | 1.54e-22 | 98.2 |
| MS.gene91133.t1 | MTR_3g065160 | 26.761 | 355 | 213 | 15 | 1 | 326 | 90 | 426 | 1.88e-22 | 97.4 |
| MS.gene91133.t1 | MTR_1g061940 | 26.284 | 331 | 204 | 12 | 3 | 303 | 101 | 421 | 4.17e-21 | 94.0 |
| MS.gene91133.t1 | MTR_1g078240 | 25.140 | 358 | 220 | 15 | 3 | 326 | 87 | 430 | 1.18e-19 | 89.7 |
| MS.gene91133.t1 | MTR_5g077850 | 25.141 | 354 | 224 | 13 | 1 | 326 | 97 | 437 | 1.41e-19 | 89.4 |
| MS.gene91133.t1 | MTR_8g094590 | 25.786 | 318 | 192 | 14 | 3 | 295 | 91 | 389 | 4.60e-19 | 87.4 |
| MS.gene91133.t1 | MTR_8g094590 | 29.185 | 233 | 134 | 10 | 3 | 222 | 91 | 305 | 9.62e-19 | 85.5 |
| MS.gene91133.t1 | MTR_1g078240 | 26.733 | 303 | 180 | 14 | 3 | 277 | 87 | 375 | 1.36e-18 | 85.9 |
| MS.gene91133.t1 | MTR_1g078240 | 25.140 | 358 | 219 | 16 | 3 | 326 | 87 | 429 | 1.45e-18 | 86.7 |
| MS.gene91133.t1 | MTR_5g061690 | 27.171 | 357 | 205 | 18 | 1 | 326 | 117 | 449 | 3.42e-15 | 76.6 |
| MS.gene91133.t1 | MTR_5g077920 | 24.919 | 309 | 204 | 11 | 1 | 288 | 84 | 385 | 5.41e-15 | 75.9 |
| MS.gene91133.t1 | MTR_3g087780 | 23.580 | 352 | 227 | 11 | 1 | 326 | 115 | 450 | 1.06e-13 | 72.0 |
| MS.gene91133.t1 | MTR_6g084710 | 24.302 | 358 | 221 | 16 | 3 | 326 | 209 | 550 | 1.20e-13 | 72.0 |
| MS.gene91133.t1 | MTR_6g084710 | 26.068 | 234 | 142 | 10 | 3 | 219 | 209 | 428 | 1.32e-13 | 71.6 |
| MS.gene91133.t1 | MTR_4g023650 | 32.086 | 187 | 95 | 10 | 3 | 165 | 79 | 257 | 2.25e-13 | 70.9 |
| MS.gene91133.t1 | MTR_2g022450 | 24.129 | 373 | 221 | 18 | 1 | 325 | 56 | 414 | 2.37e-13 | 70.9 |
| MS.gene91133.t1 | MTR_3g006820 | 22.535 | 355 | 225 | 13 | 3 | 326 | 77 | 412 | 3.98e-13 | 70.1 |
| MS.gene91133.t1 | MTR_1g029810 | 25.215 | 349 | 212 | 16 | 3 | 321 | 75 | 404 | 4.35e-12 | 67.0 |
| MS.gene91133.t1 | MTR_1g029810 | 25.071 | 351 | 214 | 16 | 1 | 321 | 73 | 404 | 5.40e-12 | 66.6 |
| MS.gene91133.t1 | MTR_4g023630 | 27.869 | 183 | 105 | 8 | 3 | 164 | 79 | 255 | 1.26e-11 | 65.5 |
| MS.gene91133.t1 | MTR_5g061690 | 26.861 | 309 | 182 | 15 | 39 | 326 | 25 | 310 | 1.54e-11 | 65.1 |
| MS.gene91133.t1 | MTR_5g080330 | 23.919 | 347 | 218 | 16 | 1 | 326 | 1 | 322 | 1.89e-11 | 65.1 |
| MS.gene91133.t1 | MTR_4g008110 | 43.750 | 80 | 39 | 2 | 57 | 130 | 45 | 124 | 7.04e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91133.t1 | AT3G20015 | 70.552 | 326 | 95 | 1 | 1 | 326 | 146 | 470 | 9.00e-157 | 447 |
| MS.gene91133.t1 | AT3G18490 | 50.610 | 328 | 156 | 4 | 1 | 326 | 177 | 500 | 4.61e-108 | 324 |
| MS.gene91133.t1 | AT1G25510 | 48.466 | 326 | 163 | 3 | 1 | 326 | 163 | 483 | 4.88e-104 | 313 |
| MS.gene91133.t1 | AT3G61820 | 49.552 | 335 | 159 | 4 | 1 | 326 | 150 | 483 | 9.33e-101 | 305 |
| MS.gene91133.t1 | AT1G01300 | 50.909 | 330 | 156 | 5 | 1 | 326 | 157 | 484 | 3.01e-99 | 301 |
| MS.gene91133.t1 | AT5G10770 | 38.922 | 334 | 189 | 7 | 1 | 326 | 147 | 473 | 1.22e-70 | 227 |
| MS.gene91133.t1 | AT2G03200 | 37.135 | 342 | 192 | 12 | 2 | 326 | 123 | 458 | 2.31e-63 | 208 |
| MS.gene91133.t1 | AT1G79720 | 35.799 | 338 | 192 | 6 | 1 | 321 | 148 | 477 | 1.53e-59 | 198 |
| MS.gene91133.t1 | AT5G10760 | 37.082 | 329 | 193 | 7 | 1 | 326 | 147 | 464 | 3.47e-57 | 192 |
| MS.gene91133.t1 | AT5G33340 | 34.421 | 337 | 201 | 9 | 2 | 326 | 106 | 434 | 1.09e-56 | 190 |
| MS.gene91133.t1 | AT1G64830 | 34.706 | 340 | 194 | 13 | 2 | 326 | 102 | 428 | 4.50e-50 | 172 |
| MS.gene91133.t1 | AT2G28040 | 33.533 | 334 | 189 | 10 | 2 | 326 | 72 | 381 | 1.38e-49 | 170 |
| MS.gene91133.t1 | AT2G28040 | 33.533 | 334 | 189 | 10 | 2 | 326 | 81 | 390 | 1.91e-49 | 170 |
| MS.gene91133.t1 | AT3G59080 | 32.092 | 349 | 213 | 8 | 1 | 326 | 185 | 532 | 2.82e-49 | 172 |
| MS.gene91133.t1 | AT2G42980 | 32.670 | 352 | 209 | 10 | 1 | 326 | 175 | 524 | 3.51e-48 | 169 |
| MS.gene91133.t1 | AT3G25700 | 31.534 | 352 | 214 | 11 | 1 | 326 | 99 | 449 | 1.14e-47 | 166 |
| MS.gene91133.t1 | AT2G28010 | 32.036 | 334 | 195 | 8 | 2 | 326 | 81 | 391 | 1.40e-46 | 162 |
| MS.gene91133.t1 | AT3G54400 | 33.533 | 334 | 202 | 10 | 1 | 326 | 103 | 424 | 1.52e-46 | 163 |
| MS.gene91133.t1 | AT2G28030 | 31.832 | 333 | 195 | 8 | 3 | 326 | 78 | 387 | 5.92e-46 | 160 |
| MS.gene91133.t1 | AT1G09750 | 31.548 | 336 | 214 | 9 | 1 | 326 | 119 | 448 | 1.21e-45 | 161 |
| MS.gene91133.t1 | AT2G28220 | 31.176 | 340 | 192 | 10 | 3 | 326 | 84 | 397 | 7.46e-43 | 152 |
| MS.gene91133.t1 | AT3G59080 | 30.814 | 344 | 188 | 8 | 1 | 326 | 185 | 496 | 3.37e-40 | 147 |
| MS.gene91133.t1 | AT2G28225 | 30.702 | 342 | 191 | 12 | 3 | 326 | 84 | 397 | 6.89e-38 | 139 |
| MS.gene91133.t1 | AT1G31450 | 30.286 | 350 | 210 | 14 | 2 | 326 | 101 | 441 | 6.97e-37 | 137 |
| MS.gene91133.t1 | AT2G35615 | 28.693 | 352 | 215 | 14 | 2 | 326 | 101 | 443 | 7.09e-36 | 135 |
| MS.gene91133.t1 | AT5G07030 | 32.743 | 339 | 201 | 10 | 1 | 326 | 130 | 454 | 1.36e-35 | 134 |
| MS.gene91133.t1 | AT4G30040 | 30.088 | 339 | 208 | 10 | 1 | 321 | 100 | 427 | 9.89e-35 | 131 |
| MS.gene91133.t1 | AT2G23945 | 30.449 | 312 | 183 | 13 | 2 | 293 | 112 | 409 | 2.31e-33 | 128 |
| MS.gene91133.t1 | AT5G43100 | 27.246 | 345 | 214 | 13 | 1 | 326 | 91 | 417 | 6.38e-30 | 119 |
| MS.gene91133.t1 | AT2G39710 | 28.767 | 365 | 205 | 16 | 1 | 325 | 80 | 429 | 1.29e-29 | 117 |
| MS.gene91133.t1 | AT4G30030 | 30.347 | 346 | 202 | 15 | 1 | 326 | 93 | 419 | 1.81e-29 | 117 |
| MS.gene91133.t1 | AT5G43100 | 27.246 | 345 | 214 | 13 | 1 | 326 | 91 | 417 | 2.06e-29 | 118 |
| MS.gene91133.t1 | AT2G36670 | 27.356 | 329 | 200 | 13 | 3 | 303 | 51 | 368 | 3.60e-29 | 116 |
| MS.gene91133.t1 | AT2G36670 | 27.356 | 329 | 200 | 13 | 3 | 303 | 51 | 368 | 3.60e-29 | 116 |
| MS.gene91133.t1 | AT2G36670 | 27.356 | 329 | 200 | 13 | 3 | 303 | 122 | 439 | 6.04e-29 | 116 |
| MS.gene91133.t1 | AT2G36670 | 27.356 | 329 | 200 | 13 | 3 | 303 | 117 | 434 | 6.68e-29 | 116 |
| MS.gene91133.t1 | AT3G02740 | 27.507 | 349 | 217 | 15 | 3 | 326 | 27 | 364 | 8.05e-27 | 109 |
| MS.gene91133.t1 | AT3G02740 | 27.195 | 353 | 213 | 15 | 3 | 326 | 102 | 439 | 2.10e-26 | 109 |
| MS.gene91133.t1 | AT3G12700 | 27.536 | 345 | 226 | 13 | 1 | 326 | 121 | 460 | 5.29e-26 | 107 |
| MS.gene91133.t1 | AT3G50050 | 27.378 | 347 | 213 | 13 | 1 | 326 | 108 | 436 | 5.44e-26 | 108 |
| MS.gene91133.t1 | AT5G02190 | 28.184 | 369 | 208 | 18 | 1 | 326 | 88 | 442 | 8.61e-25 | 104 |
| MS.gene91133.t1 | AT1G66180 | 27.920 | 351 | 217 | 13 | 1 | 326 | 87 | 426 | 2.29e-24 | 102 |
| MS.gene91133.t1 | AT5G37540 | 27.557 | 352 | 221 | 12 | 1 | 326 | 95 | 438 | 3.01e-24 | 102 |
| MS.gene91133.t1 | AT5G36260 | 24.571 | 350 | 227 | 13 | 3 | 326 | 95 | 433 | 2.13e-23 | 100 |
| MS.gene91133.t1 | AT5G22850 | 28.399 | 331 | 196 | 14 | 3 | 303 | 98 | 417 | 3.64e-23 | 100 |
| MS.gene91133.t1 | AT3G52500 | 27.419 | 372 | 215 | 14 | 1 | 326 | 105 | 467 | 1.34e-22 | 98.2 |
| MS.gene91133.t1 | AT1G05840 | 26.124 | 356 | 217 | 15 | 3 | 326 | 97 | 438 | 2.24e-22 | 97.8 |
| MS.gene91133.t1 | AT1G65240 | 25.348 | 359 | 210 | 17 | 3 | 326 | 91 | 426 | 2.32e-21 | 94.7 |
| MS.gene91133.t1 | AT1G08210 | 27.557 | 352 | 215 | 16 | 3 | 326 | 135 | 474 | 4.06e-20 | 91.3 |
| MS.gene91133.t1 | AT1G08210 | 27.557 | 352 | 215 | 16 | 3 | 326 | 101 | 440 | 4.85e-20 | 90.9 |
| MS.gene91133.t1 | AT1G08210 | 27.557 | 352 | 215 | 16 | 3 | 326 | 149 | 488 | 4.87e-20 | 91.3 |
| MS.gene91133.t1 | AT5G45120 | 22.798 | 386 | 229 | 14 | 3 | 326 | 100 | 478 | 8.84e-20 | 90.1 |
| MS.gene91133.t1 | AT4G12920 | 27.761 | 335 | 187 | 11 | 1 | 313 | 73 | 374 | 1.17e-19 | 89.0 |
| MS.gene91133.t1 | AT1G08210 | 29.000 | 300 | 176 | 14 | 3 | 277 | 101 | 388 | 1.86e-19 | 89.4 |
| MS.gene91133.t1 | AT4G16563 | 27.889 | 398 | 207 | 16 | 3 | 326 | 100 | 491 | 2.36e-19 | 89.0 |
| MS.gene91133.t1 | AT1G49050 | 26.087 | 253 | 155 | 12 | 3 | 236 | 222 | 461 | 2.31e-16 | 80.1 |
| MS.gene91133.t1 | AT2G17760 | 25.344 | 363 | 202 | 19 | 1 | 326 | 119 | 449 | 3.24e-16 | 79.7 |
| MS.gene91133.t1 | AT1G49050 | 26.360 | 239 | 144 | 12 | 3 | 222 | 222 | 447 | 8.30e-16 | 78.6 |
| MS.gene91133.t1 | AT1G49050 | 26.360 | 239 | 144 | 12 | 3 | 222 | 49 | 274 | 1.17e-15 | 77.8 |
| MS.gene91133.t1 | AT1G77480 | 26.389 | 360 | 209 | 20 | 1 | 326 | 82 | 419 | 1.34e-15 | 77.8 |
| MS.gene91133.t1 | AT1G77480 | 26.536 | 358 | 207 | 20 | 3 | 326 | 84 | 419 | 1.93e-15 | 77.0 |
| MS.gene91133.t1 | AT4G35880 | 24.702 | 336 | 211 | 14 | 1 | 313 | 122 | 438 | 9.94e-15 | 75.1 |
| MS.gene91133.t1 | AT3G51340 | 26.136 | 352 | 212 | 18 | 1 | 326 | 118 | 447 | 5.23e-14 | 73.2 |
| MS.gene91133.t1 | AT3G51350 | 24.713 | 348 | 205 | 17 | 1 | 321 | 117 | 434 | 8.54e-14 | 72.4 |
| MS.gene91133.t1 | AT4G35880 | 24.383 | 324 | 203 | 13 | 1 | 301 | 122 | 426 | 1.19e-13 | 71.6 |
| MS.gene91133.t1 | AT1G44130 | 24.157 | 356 | 216 | 18 | 3 | 326 | 66 | 399 | 1.53e-12 | 68.2 |
| MS.gene91133.t1 | AT3G51330 | 25.568 | 352 | 221 | 17 | 1 | 326 | 117 | 453 | 1.26e-11 | 65.5 |
| MS.gene91133.t1 | AT3G51340 | 26.073 | 303 | 180 | 15 | 1 | 280 | 118 | 399 | 1.27e-11 | 65.5 |
| MS.gene91133.t1 | AT3G51330 | 25.568 | 352 | 221 | 17 | 1 | 326 | 117 | 453 | 1.43e-11 | 65.5 |
| MS.gene91133.t1 | AT5G10080 | 23.691 | 363 | 216 | 16 | 1 | 326 | 115 | 453 | 4.02e-11 | 64.3 |
Find 109 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATATTTGTTCGGATA+TGG | 0.122611 | 1.3:+22335766 | None:intergenic |
| GCTACTTCTGCTTCGTTTAT+TGG | 0.138095 | 1.3:-22337226 | MS.gene91133:CDS |
| TTCTACTACGTCTCACTTTC+GGG | 0.179528 | 1.3:-22335815 | MS.gene91133:CDS |
| CTACTTCTGCTTCGTTTATT+GGG | 0.181833 | 1.3:-22337225 | MS.gene91133:CDS |
| GATATCCACACCTCCCTTTC+CGG | 0.230477 | 1.3:+22337152 | None:intergenic |
| GCCCAAACCGGCGGAGCTTT+TGG | 0.253579 | 1.3:-22335953 | MS.gene91133:CDS |
| CCTTCCGGCCTTTCCATCAT+AGG | 0.264021 | 1.3:-22335446 | MS.gene91133:CDS |
| CTTCTACTACGTCTCACTTT+CGG | 0.273039 | 1.3:-22335816 | MS.gene91133:CDS |
| GGAATGTTTGTTGGAGCAGC+TGG | 0.314111 | 1.3:-22336025 | MS.gene91133:CDS |
| ATTCAGGAAGTGATATTGTT+TGG | 0.328169 | 1.3:-22337306 | MS.gene91133:CDS |
| ATCCAAAAGCTCCGCCGGTT+TGG | 0.334659 | 1.3:+22335951 | None:intergenic |
| GTTTCTATCGATGGAACTAA+TGG | 0.337355 | 1.3:-22335398 | MS.gene91133:CDS |
| TCCAAAAGCTCCGCCGGTTT+GGG | 0.338784 | 1.3:+22335952 | None:intergenic |
| AACGGTCCGCCCGATGGTTA+TGG | 0.339939 | 1.3:+22336087 | None:intergenic |
| GCATTTGCTCCTTCACCTTC+CGG | 0.343523 | 1.3:-22335461 | MS.gene91133:CDS |
| TATGTCTTTCGTGGGCCAAT+TGG | 0.346916 | 1.3:-22335978 | MS.gene91133:CDS |
| GTTGGAGCAGCTGGGTTGTT+AGG | 0.347858 | 1.3:-22336016 | MS.gene91133:CDS |
| CGCCGGTTTGGGCTCCCAAT+TGG | 0.356798 | 1.3:+22335963 | None:intergenic |
| TGAAATATTTGTTCGGATAT+GGG | 0.367001 | 1.3:+22335767 | None:intergenic |
| ATGTCTTTCGTGGGCCAATT+GGG | 0.379833 | 1.3:-22335977 | MS.gene91133:CDS |
| CAGTATATGGTGATAGATTC+AGG | 0.394103 | 1.3:-22337322 | None:intergenic |
| ATATTTCAGTTAACTGATAT+AGG | 0.421183 | 1.3:-22335752 | MS.gene91133:CDS |
| TCACTTTCGGGTCTTGCAGT+TGG | 0.424557 | 1.3:-22335803 | MS.gene91133:CDS |
| CTTTCGGGTCTTGCAGTTGG+AGG | 0.428746 | 1.3:-22335800 | MS.gene91133:CDS |
| CAGTTAACTGATATAGGAAC+TGG | 0.429276 | 1.3:-22335746 | MS.gene91133:CDS |
| TTGCACCTACGGGCATTGCT+TGG | 0.431235 | 1.3:+22335876 | None:intergenic |
| TGGAACGAGGGAATGTTTGT+TGG | 0.432846 | 1.3:-22336034 | MS.gene91133:CDS |
| TTGCTGAATATTCCCTATGA+TGG | 0.435218 | 1.3:+22335433 | None:intergenic |
| TTGATGATGATGTTGCTTGC+CGG | 0.437671 | 1.3:-22337171 | MS.gene91133:CDS |
| GCAGCTGGGTTGTTAGGCCT+CGG | 0.440728 | 1.3:-22336010 | MS.gene91133:CDS |
| CACCTACGGGCATTGCTTGG+CGG | 0.442399 | 1.3:+22335879 | None:intergenic |
| TGCATCGCGAAAAGCATTGT+AGG | 0.452930 | 1.3:+22335673 | None:intergenic |
| CTGCAATCGGGTGCGGACAT+TGG | 0.452938 | 1.3:-22336054 | MS.gene91133:CDS |
| TGTCTCATCTCTCGAGGCAC+TGG | 0.460971 | 1.3:-22335926 | MS.gene91133:CDS |
| GGCCAATTGGGAGCCCAAAC+CGG | 0.466739 | 1.3:-22335965 | MS.gene91133:CDS |
| AGTTAACTGAAATATTTGTT+CGG | 0.472372 | 1.3:+22335760 | None:intergenic |
| TCATCCGGTTCACTCGAATT+CGG | 0.477307 | 1.3:-22335902 | MS.gene91133:CDS |
| TTCTGCTTCGTTTATTGGGG+TGG | 0.480733 | 1.3:-22337221 | MS.gene91133:CDS |
| GGAATTCAAGTTTCTATCGA+TGG | 0.482938 | 1.3:-22335407 | MS.gene91133:CDS |
| AAATCTTGACCTTTCCCGCC+AGG | 0.483966 | 1.3:-22335526 | MS.gene91133:CDS |
| TGTTTGCTTCAACACACATT+GGG | 0.485439 | 1.3:+22335359 | None:intergenic |
| TTGATCCCGGCCGATGATGT+TGG | 0.486689 | 1.3:-22335497 | MS.gene91133:CDS |
| GATTGCAGTGTCCTTGATAA+CGG | 0.491062 | 1.3:+22336069 | None:intergenic |
| TCTCGAGGCACTGGATCATC+CGG | 0.493723 | 1.3:-22335917 | MS.gene91133:CDS |
| CTTCCGGCCTTTCCATCATA+GGG | 0.495950 | 1.3:-22335445 | MS.gene91133:CDS |
| AGTGAGACGTAGTAGAAGCT+AGG | 0.502354 | 1.3:+22335821 | None:intergenic |
| GTTATCAAGGACACTGCAAT+CGG | 0.503421 | 1.3:-22336067 | MS.gene91133:CDS |
| AGTAGAAGCTAGGGTAGAAC+GGG | 0.505044 | 1.3:+22335831 | None:intergenic |
| GTGAGACGTAGTAGAAGCTA+GGG | 0.505740 | 1.3:+22335822 | None:intergenic |
| ATAAACGAAGCAGAAGTAGC+AGG | 0.508250 | 1.3:+22337229 | None:intergenic |
| CTCTTGAAACCATAACCATC+GGG | 0.512781 | 1.3:-22336096 | MS.gene91133:CDS |
| CATCGGGCGGACCGTTATCA+AGG | 0.514418 | 1.3:-22336080 | MS.gene91133:CDS |
| AGGAACCCACATTGCACCTA+CGG | 0.516231 | 1.3:+22335865 | None:intergenic |
| AGGCGGACCTATGTCTTTCG+TGG | 0.516357 | 1.3:-22335987 | MS.gene91133:CDS |
| CTTGATAACGGTCCGCCCGA+TGG | 0.523145 | 1.3:+22336081 | None:intergenic |
| ATGATGTTGCTTGCCGGAAA+GGG | 0.527421 | 1.3:-22337165 | MS.gene91133:CDS |
| AAAGTTCCAACATCATCGGC+CGG | 0.529607 | 1.3:+22335491 | None:intergenic |
| ATTCCCTATGATGGAAAGGC+CGG | 0.534777 | 1.3:+22335442 | None:intergenic |
| AACAGTAGGTAACCTGGTAA+TGG | 0.535985 | 1.3:+22335697 | None:intergenic |
| GCGGCCGAATTCGAGTGAAC+CGG | 0.537447 | 1.3:+22335898 | None:intergenic |
| TACTTCTGCTTCGTTTATTG+GGG | 0.538816 | 1.3:-22337224 | MS.gene91133:CDS |
| GGGTTGTTAGGCCTCGGAGG+CGG | 0.540839 | 1.3:-22336004 | MS.gene91133:CDS |
| GGAACCCACATTGCACCTAC+GGG | 0.543677 | 1.3:+22335866 | None:intergenic |
| GAATGTTTGTTGGAGCAGCT+GGG | 0.555216 | 1.3:-22336024 | MS.gene91133:CDS |
| GCTCTTGAAACCATAACCAT+CGG | 0.557569 | 1.3:-22336097 | MS.gene91133:CDS |
| ACACCGGCACTGCCATTACC+AGG | 0.558520 | 1.3:-22335709 | MS.gene91133:CDS |
| ATGGAAAGGCCGGAAGGTGA+AGG | 0.558896 | 1.3:+22335452 | None:intergenic |
| GACACGTGTTATGACTTGAA+CGG | 0.559620 | 1.3:-22335599 | MS.gene91133:CDS |
| GAAATATTTGTTCGGATATG+GGG | 0.560097 | 1.3:+22335768 | None:intergenic |
| AATTGGCCCACGAAAGACAT+AGG | 0.560178 | 1.3:+22335980 | None:intergenic |
| TGTGGATATCAAGTTGCATA+TGG | 0.560299 | 1.3:-22337139 | MS.gene91133:CDS |
| GATGATGTTGCTTGCCGGAA+AGG | 0.565770 | 1.3:-22337166 | MS.gene91133:CDS |
| TAGTAGAAGCTAGGGTAGAA+CGG | 0.569534 | 1.3:+22335830 | None:intergenic |
| ACAGTATCCAAAAGCTCCGC+CGG | 0.570266 | 1.3:+22335946 | None:intergenic |
| ATGTTTGCTTCAACACACAT+TGG | 0.570489 | 1.3:+22335358 | None:intergenic |
| TAACCTGGTAATGGCAGTGC+CGG | 0.574280 | 1.3:+22335706 | None:intergenic |
| AAGTTCCAACATCATCGGCC+GGG | 0.575288 | 1.3:+22335492 | None:intergenic |
| ATCAAGTTGCATATGGTGAT+GGG | 0.575723 | 1.3:-22337132 | MS.gene91133:CDS |
| GGCGGACCTATGTCTTTCGT+GGG | 0.577203 | 1.3:-22335986 | MS.gene91133:CDS |
| AAGGACACTGCAATCGGGTG+CGG | 0.585643 | 1.3:-22336061 | MS.gene91133:CDS |
| GAATATTCCCTATGATGGAA+AGG | 0.586145 | 1.3:+22335438 | None:intergenic |
| TATCAAGTTGCATATGGTGA+TGG | 0.587507 | 1.3:-22337133 | MS.gene91133:CDS |
| ACAGAAAGTTCCAACATCAT+CGG | 0.592640 | 1.3:+22335487 | None:intergenic |
| TAAACGAAGCAGAAGTAGCA+GGG | 0.592676 | 1.3:+22337230 | None:intergenic |
| AGGAACTGGAGGAGTTGTCA+TGG | 0.595896 | 1.3:-22335732 | MS.gene91133:CDS |
| TGATTATAACATTGATCACA+AGG | 0.597383 | 1.3:+22337271 | None:intergenic |
| ATAGGGAATATTCAGCAAGA+AGG | 0.599831 | 1.3:-22335428 | MS.gene91133:CDS |
| GGATACTGTCTCATCTCTCG+AGG | 0.601506 | 1.3:-22335932 | MS.gene91133:CDS |
| AAAGCATTGTAGGCAACAGT+AGG | 0.603981 | 1.3:+22335683 | None:intergenic |
| GGCCGCCAAGCAATGCCCGT+AGG | 0.608414 | 1.3:-22335881 | MS.gene91133:CDS |
| GGAGGAGTTGTCATGGACAC+CGG | 0.609345 | 1.3:-22335725 | MS.gene91133:CDS |
| GTAGGCAACAGTAGGTAACC+TGG | 0.609612 | 1.3:+22335691 | None:intergenic |
| TTATCAAGGACACTGCAATC+GGG | 0.611505 | 1.3:-22336066 | MS.gene91133:CDS |
| CAATGCCCGTAGGTGCAATG+TGG | 0.615447 | 1.3:-22335871 | MS.gene91133:CDS |
| AATGCCCGTAGGTGCAATGT+GGG | 0.625127 | 1.3:-22335870 | MS.gene91133:CDS |
| GGTGATGGGTCGTCTACCAA+AGG | 0.626771 | 1.3:-22337118 | MS.gene91133:intron |
| AAGACATAGGTCCGCCTCCG+AGG | 0.626970 | 1.3:+22335993 | None:intergenic |
| ATAGAAACTCTGGGAGCACG+TGG | 0.629230 | 1.3:+22335626 | None:intergenic |
| CGACACTGTTGGAACTCGAA+CGG | 0.632988 | 1.3:+22335568 | None:intergenic |
| TTAACTGATATAGGAACTGG+AGG | 0.635628 | 1.3:-22335743 | MS.gene91133:CDS |
| ATGTTGCTTGCCGGAAAGGG+AGG | 0.650168 | 1.3:-22337162 | MS.gene91133:CDS |
| CCTATGATGGAAAGGCCGGA+AGG | 0.652036 | 1.3:+22335446 | None:intergenic |
| GGGTGCGGACATTGGAACGA+GGG | 0.652299 | 1.3:-22336046 | MS.gene91133:CDS |
| CAATTGGGAGCCCAAACCGG+CGG | 0.653313 | 1.3:-22335962 | MS.gene91133:CDS |
| CGGGTGCGGACATTGGAACG+AGG | 0.653686 | 1.3:-22336047 | MS.gene91133:CDS |
| GCTGGGTTGTTAGGCCTCGG+AGG | 0.656874 | 1.3:-22336007 | MS.gene91133:CDS |
| TAGAACGGGTTATGAATGAG+AGG | 0.671064 | 1.3:+22335845 | None:intergenic |
| TTGAAACCATAACCATCGGG+CGG | 0.703144 | 1.3:-22336093 | MS.gene91133:CDS |
| GCTTGCCGGAAAGGGAGGTG+TGG | 0.712007 | 1.3:-22337157 | MS.gene91133:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAAAATTTTAAAATCAAT+TGG | + | chr1.3:22336437-22336456 | None:intergenic | 10.0% |
| !! | AAAATAAAGTGATTTATGTT+TGG | + | chr1.3:22336368-22336387 | None:intergenic | 15.0% |
| !! | TGATAAAGAATTAATTGTAA+AGG | - | chr1.3:22336104-22336123 | MS.gene91133:CDS | 15.0% |
| !!! | AAGTTAGAATTTTTAGATTA+TGG | - | chr1.3:22336201-22336220 | MS.gene91133:intron | 15.0% |
| !!! | AGAATTTAATTTAACATGTT+TGG | - | chr1.3:22335771-22335790 | MS.gene91133:CDS | 15.0% |
| !!! | TTTTTCATTTTACTTTTAGA+TGG | - | chr1.3:22335689-22335708 | MS.gene91133:CDS | 15.0% |
| !! | AGTTAACTGAAATATTTGTT+CGG | + | chr1.3:22336926-22336945 | None:intergenic | 20.0% |
| !! | ATATTTCAGTTAACTGATAT+AGG | - | chr1.3:22336931-22336950 | MS.gene91133:intron | 20.0% |
| !! | TCTTTATGTAATCTGATTAT+TGG | - | chr1.3:22336537-22336556 | MS.gene91133:intron | 20.0% |
| !!! | AGACAAAATTGATTCTAAAA+GGG | - | chr1.3:22335744-22335763 | MS.gene91133:CDS | 20.0% |
| !!! | ATTAGCTTGATTCTATAAAA+TGG | + | chr1.3:22336410-22336429 | None:intergenic | 20.0% |
| !!! | TGTATGTTTGGTTTTATTTT+TGG | - | chr1.3:22336080-22336099 | MS.gene91133:CDS | 20.0% |
| !!! | TTTTAGATGGTGTTTATATT+AGG | - | chr1.3:22335702-22335721 | MS.gene91133:CDS | 20.0% |
| ! | AAAGAGTAGAATAAAATGCA+TGG | - | chr1.3:22336512-22336531 | MS.gene91133:intron | 25.0% |
| ! | TGAAATATTTGTTCGGATAT+GGG | + | chr1.3:22336919-22336938 | None:intergenic | 25.0% |
| ! | TGATTATAACATTGATCACA+AGG | + | chr1.3:22335415-22335434 | None:intergenic | 25.0% |
| !! | GAGACAAAATTGATTCTAAA+AGG | - | chr1.3:22335743-22335762 | MS.gene91133:CDS | 25.0% |
| !!! | AATTATCATTTCCCCTTTTT+TGG | + | chr1.3:22336010-22336029 | None:intergenic | 25.0% |
| !!! | GAATTTTTAGATTATGGCTA+AGG | - | chr1.3:22336207-22336226 | MS.gene91133:intron | 25.0% |
| !!! | GGTGTAAAATTGATTTTGAT+AGG | - | chr1.3:22336125-22336144 | MS.gene91133:intron | 25.0% |
| !!! | TGTTTTAAGTACATTGTTCA+AGG | + | chr1.3:22336322-22336341 | None:intergenic | 25.0% |
| AACAAAGCAAGAAAAATGTG+TGG | + | chr1.3:22335626-22335645 | None:intergenic | 30.0% | |
| ACCAAACATAACCAAAAAAG+GGG | - | chr1.3:22335996-22336015 | MS.gene91133:CDS | 30.0% | |
| ATTCACATTGAGTGTATGTT+TGG | - | chr1.3:22336068-22336087 | MS.gene91133:CDS | 30.0% | |
| ATTCAGGAAGTGATATTGTT+TGG | - | chr1.3:22335377-22335396 | MS.gene91133:CDS | 30.0% | |
| CACCAAACATAACCAAAAAA+GGG | - | chr1.3:22335995-22336014 | MS.gene91133:CDS | 30.0% | |
| CTGAAATATTTGTTCGGATA+TGG | + | chr1.3:22336920-22336939 | None:intergenic | 30.0% | |
| GAAAAATAAAACGACACTGT+TGG | + | chr1.3:22337129-22337148 | None:intergenic | 30.0% | |
| GAAATATTTGTTCGGATATG+GGG | + | chr1.3:22336918-22336937 | None:intergenic | 30.0% | |
| GTGTCAAAAATAGAAACTCT+GGG | + | chr1.3:22337069-22337088 | None:intergenic | 30.0% | |
| ! | TGGTTTCCAATGTTGATAAA+GGG | - | chr1.3:22336557-22336576 | MS.gene91133:intron | 30.0% |
| ! | TTGGTTTCCAATGTTGATAA+AGG | - | chr1.3:22336556-22336575 | MS.gene91133:intron | 30.0% |
| !! | TAGGTTCTACTGTATTTTAG+AGG | - | chr1.3:22335721-22335740 | MS.gene91133:CDS | 30.0% |
| !!! | ACAGTGTCGTTTTATTTTTC+AGG | - | chr1.3:22337129-22337148 | MS.gene91133:CDS | 30.0% |
| !!! | ACTAATGGTTTTGTAGGATT+TGG | - | chr1.3:22337300-22337319 | MS.gene91133:CDS | 30.0% |
| ACAGAAAGTTCCAACATCAT+CGG | + | chr1.3:22337199-22337218 | None:intergenic | 35.0% | |
| ATAGGGAATATTCAGCAAGA+AGG | - | chr1.3:22337255-22337274 | MS.gene91133:CDS | 35.0% | |
| CAGTTAACTGATATAGGAAC+TGG | - | chr1.3:22336937-22336956 | MS.gene91133:intron | 35.0% | |
| CGTGTCAAAAATAGAAACTC+TGG | + | chr1.3:22337070-22337089 | None:intergenic | 35.0% | |
| CTACTTCTGCTTCGTTTATT+GGG | - | chr1.3:22335458-22335477 | MS.gene91133:CDS | 35.0% | |
| GAAGTAGCAGGGTTAAAAAT+AGG | + | chr1.3:22335445-22335464 | None:intergenic | 35.0% | |
| GCACCAAACATAACCAAAAA+AGG | - | chr1.3:22335994-22336013 | MS.gene91133:CDS | 35.0% | |
| GTTTCTATCGATGGAACTAA+TGG | - | chr1.3:22337285-22337304 | MS.gene91133:CDS | 35.0% | |
| TACTTCTGCTTCGTTTATTG+GGG | - | chr1.3:22335459-22335478 | MS.gene91133:CDS | 35.0% | |
| TTAACTGATATAGGAACTGG+AGG | - | chr1.3:22336940-22336959 | MS.gene91133:intron | 35.0% | |
| TTGCTGAATATTCCCTATGA+TGG | + | chr1.3:22337253-22337272 | None:intergenic | 35.0% | |
| ! | ATCAAGTTGCATATGGTGAT+GGG | - | chr1.3:22335551-22335570 | MS.gene91133:CDS | 35.0% |
| ! | GAATATTCCCTATGATGGAA+AGG | + | chr1.3:22337248-22337267 | None:intergenic | 35.0% |
| ! | GGAATTCAAGTTTCTATCGA+TGG | - | chr1.3:22337276-22337295 | MS.gene91133:CDS | 35.0% |
| ! | TATCAAGTTGCATATGGTGA+TGG | - | chr1.3:22335550-22335569 | MS.gene91133:CDS | 35.0% |
| ! | TGTGGATATCAAGTTGCATA+TGG | - | chr1.3:22335544-22335563 | MS.gene91133:CDS | 35.0% |
| !!! | GATGGAACTAATGGTTTTGT+AGG | - | chr1.3:22337294-22337313 | MS.gene91133:CDS | 35.0% |
| !!! | GTGTCGTTTTATTTTTCAGG+TGG | - | chr1.3:22337132-22337151 | MS.gene91133:CDS | 35.0% |
| !!! | TCCCCTTTTTTGGTTATGTT+TGG | + | chr1.3:22336000-22336019 | None:intergenic | 35.0% |
| AACAGTAGGTAACCTGGTAA+TGG | + | chr1.3:22336989-22337008 | None:intergenic | 40.0% | |
| AAGCGTCCCTTTATCAACAT+TGG | + | chr1.3:22336566-22336585 | None:intergenic | 40.0% | |
| ATAAACGAAGCAGAAGTAGC+AGG | + | chr1.3:22335457-22335476 | None:intergenic | 40.0% | |
| CTCTTGAAACCATAACCATC+GGG | - | chr1.3:22336587-22336606 | MS.gene91133:intron | 40.0% | |
| CTTCACACAGTACATACCTT+TGG | + | chr1.3:22335584-22335603 | None:intergenic | 40.0% | |
| CTTCTACTACGTCTCACTTT+CGG | - | chr1.3:22336867-22336886 | MS.gene91133:intron | 40.0% | |
| GACACGTGTTATGACTTGAA+CGG | - | chr1.3:22337084-22337103 | MS.gene91133:intron | 40.0% | |
| GATTGCAGTGTCCTTGATAA+CGG | + | chr1.3:22336617-22336636 | None:intergenic | 40.0% | |
| GCTACTTCTGCTTCGTTTAT+TGG | - | chr1.3:22335457-22335476 | MS.gene91133:CDS | 40.0% | |
| GCTCTTGAAACCATAACCAT+CGG | - | chr1.3:22336586-22336605 | MS.gene91133:intron | 40.0% | |
| GTTATCAAGGACACTGCAAT+CGG | - | chr1.3:22336616-22336635 | MS.gene91133:intron | 40.0% | |
| TAAACGAAGCAGAAGTAGCA+GGG | + | chr1.3:22335456-22335475 | None:intergenic | 40.0% | |
| TAGTAGAAGCTAGGGTAGAA+CGG | + | chr1.3:22336856-22336875 | None:intergenic | 40.0% | |
| TTATCAAGGACACTGCAATC+GGG | - | chr1.3:22336617-22336636 | MS.gene91133:intron | 40.0% | |
| TTCTACTACGTCTCACTTTC+GGG | - | chr1.3:22336868-22336887 | MS.gene91133:intron | 40.0% | |
| !! | AAAGCATTGTAGGCAACAGT+AGG | + | chr1.3:22337003-22337022 | None:intergenic | 40.0% |
| !! | TAGAACGGGTTATGAATGAG+AGG | + | chr1.3:22336841-22336860 | None:intergenic | 40.0% |
| !! | TTGATGATGATGTTGCTTGC+CGG | - | chr1.3:22335512-22335531 | MS.gene91133:CDS | 40.0% |
| AAAGTTCCAACATCATCGGC+CGG | + | chr1.3:22337195-22337214 | None:intergenic | 45.0% | |
| AATTGGCCCACGAAAGACAT+AGG | + | chr1.3:22336706-22336725 | None:intergenic | 45.0% | |
| AGTAGAAGCTAGGGTAGAAC+GGG | + | chr1.3:22336855-22336874 | None:intergenic | 45.0% | |
| AGTGAGACGTAGTAGAAGCT+AGG | + | chr1.3:22336865-22336884 | None:intergenic | 45.0% | |
| ATGTCTTTCGTGGGCCAATT+GGG | - | chr1.3:22336706-22336725 | MS.gene91133:intron | 45.0% | |
| CAAAAAATTCCTGGCGGGAA+AGG | + | chr1.3:22337169-22337188 | None:intergenic | 45.0% | |
| CGGGATCAAAAAATTCCTGG+CGG | + | chr1.3:22337175-22337194 | None:intergenic | 45.0% | |
| GGGATCAAAAAATTCCTGGC+GGG | + | chr1.3:22337174-22337193 | None:intergenic | 45.0% | |
| GTGAGACGTAGTAGAAGCTA+GGG | + | chr1.3:22336864-22336883 | None:intergenic | 45.0% | |
| TATGTCTTTCGTGGGCCAAT+TGG | - | chr1.3:22336705-22336724 | MS.gene91133:intron | 45.0% | |
| TCATCCGGTTCACTCGAATT+CGG | - | chr1.3:22336781-22336800 | MS.gene91133:intron | 45.0% | |
| TGGAACGAGGGAATGTTTGT+TGG | - | chr1.3:22336649-22336668 | MS.gene91133:intron | 45.0% | |
| TTCTGCTTCGTTTATTGGGG+TGG | - | chr1.3:22335462-22335481 | MS.gene91133:CDS | 45.0% | |
| TTGAAACCATAACCATCGGG+CGG | - | chr1.3:22336590-22336609 | MS.gene91133:intron | 45.0% | |
| ! | ATGATGTTGCTTGCCGGAAA+GGG | - | chr1.3:22335518-22335537 | MS.gene91133:CDS | 45.0% |
| ! | ATTCCCTATGATGGAAAGGC+CGG | + | chr1.3:22337244-22337263 | None:intergenic | 45.0% |
| ! | GAATGTTTGTTGGAGCAGCT+GGG | - | chr1.3:22336659-22336678 | MS.gene91133:intron | 45.0% |
| !! | TGCATCGCGAAAAGCATTGT+AGG | + | chr1.3:22337013-22337032 | None:intergenic | 45.0% |
| !!! | CGCCAGGAATTTTTTGATCC+CGG | - | chr1.3:22337173-22337192 | MS.gene91133:CDS | 45.0% |
| AAATCTTGACCTTTCCCGCC+AGG | - | chr1.3:22337157-22337176 | MS.gene91133:CDS | 50.0% | |
| AAGTTCCAACATCATCGGCC+GGG | + | chr1.3:22337194-22337213 | None:intergenic | 50.0% | |
| AATGCCCGTAGGTGCAATGT+GGG | - | chr1.3:22336813-22336832 | MS.gene91133:intron | 50.0% | |
| ACAGTATCCAAAAGCTCCGC+CGG | + | chr1.3:22336740-22336759 | None:intergenic | 50.0% | |
| AGGAACCCACATTGCACCTA+CGG | + | chr1.3:22336821-22336840 | None:intergenic | 50.0% | |
| AGGAACTGGAGGAGTTGTCA+TGG | - | chr1.3:22336951-22336970 | MS.gene91133:intron | 50.0% | |
| CGACACTGTTGGAACTCGAA+CGG | + | chr1.3:22337118-22337137 | None:intergenic | 50.0% | |
| CTTCCGGCCTTTCCATCATA+GGG | - | chr1.3:22337238-22337257 | MS.gene91133:CDS | 50.0% | |
| GATATCCACACCTCCCTTTC+CGG | + | chr1.3:22335534-22335553 | None:intergenic | 50.0% | |
| GCATTTGCTCCTTCACCTTC+CGG | - | chr1.3:22337222-22337241 | MS.gene91133:CDS | 50.0% | |
| GGATACTGTCTCATCTCTCG+AGG | - | chr1.3:22336751-22336770 | MS.gene91133:intron | 50.0% | |
| GGCCGGGATCAAAAAATTCC+TGG | + | chr1.3:22337178-22337197 | None:intergenic | 50.0% | |
| GTAGGCAACAGTAGGTAACC+TGG | + | chr1.3:22336995-22337014 | None:intergenic | 50.0% | |
| ! | ATAGAAACTCTGGGAGCACG+TGG | + | chr1.3:22337060-22337079 | None:intergenic | 50.0% |
| ! | GATGATGTTGCTTGCCGGAA+AGG | - | chr1.3:22335517-22335536 | MS.gene91133:CDS | 50.0% |
| ! | GGAATGTTTGTTGGAGCAGC+TGG | - | chr1.3:22336658-22336677 | MS.gene91133:intron | 50.0% |
| ! | TCACTTTCGGGTCTTGCAGT+TGG | - | chr1.3:22336880-22336899 | MS.gene91133:intron | 50.0% |
| !! | TAACCTGGTAATGGCAGTGC+CGG | + | chr1.3:22336980-22336999 | None:intergenic | 50.0% |
| AAGGACACTGCAATCGGGTG+CGG | - | chr1.3:22336622-22336641 | MS.gene91133:intron | 55.0% | |
| AGGCGGACCTATGTCTTTCG+TGG | - | chr1.3:22336696-22336715 | MS.gene91133:intron | 55.0% | |
| ATGGAAAGGCCGGAAGGTGA+AGG | + | chr1.3:22337234-22337253 | None:intergenic | 55.0% | |
| CAATGCCCGTAGGTGCAATG+TGG | - | chr1.3:22336812-22336831 | MS.gene91133:intron | 55.0% | |
| CCTTCCGGCCTTTCCATCAT+AGG | - | chr1.3:22337237-22337256 | MS.gene91133:CDS | 55.0% | |
| GGAACCCACATTGCACCTAC+GGG | + | chr1.3:22336820-22336839 | None:intergenic | 55.0% | |
| GGAGGAGTTGTCATGGACAC+CGG | - | chr1.3:22336958-22336977 | MS.gene91133:intron | 55.0% | |
| GGCGGACCTATGTCTTTCGT+GGG | - | chr1.3:22336697-22336716 | MS.gene91133:intron | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+AGG | - | chr1.3:22336667-22336686 | MS.gene91133:intron | 55.0% | |
| TGTCTCATCTCTCGAGGCAC+TGG | - | chr1.3:22336757-22336776 | MS.gene91133:intron | 55.0% | |
| TTGATCCCGGCCGATGATGT+TGG | - | chr1.3:22337186-22337205 | MS.gene91133:CDS | 55.0% | |
| ! | ATCCAAAAGCTCCGCCGGTT+TGG | + | chr1.3:22336735-22336754 | None:intergenic | 55.0% |
| ! | ATGTTGCTTGCCGGAAAGGG+AGG | - | chr1.3:22335521-22335540 | MS.gene91133:CDS | 55.0% |
| ! | CCTATGATGGAAAGGCCGGA+AGG | + | chr1.3:22337240-22337259 | None:intergenic | 55.0% |
| ! | CTTTCGGGTCTTGCAGTTGG+AGG | - | chr1.3:22336883-22336902 | MS.gene91133:intron | 55.0% |
| ! | TTGCACCTACGGGCATTGCT+TGG | + | chr1.3:22336810-22336829 | None:intergenic | 55.0% |
| !! | GGTGATGGGTCGTCTACCAA+AGG | - | chr1.3:22335565-22335584 | MS.gene91133:CDS | 55.0% |
| !! | TCCAAAAGCTCCGCCGGTTT+GGG | + | chr1.3:22336734-22336753 | None:intergenic | 55.0% |
| !! | TCTCGAGGCACTGGATCATC+CGG | - | chr1.3:22336766-22336785 | MS.gene91133:intron | 55.0% |
| AACGGTCCGCCCGATGGTTA+TGG | + | chr1.3:22336599-22336618 | None:intergenic | 60.0% | |
| AAGACATAGGTCCGCCTCCG+AGG | + | chr1.3:22336693-22336712 | None:intergenic | 60.0% | |
| ACACCGGCACTGCCATTACC+AGG | - | chr1.3:22336974-22336993 | MS.gene91133:intron | 60.0% | |
| CAATTGGGAGCCCAAACCGG+CGG | - | chr1.3:22336721-22336740 | MS.gene91133:intron | 60.0% | |
| CATCGGGCGGACCGTTATCA+AGG | - | chr1.3:22336603-22336622 | MS.gene91133:intron | 60.0% | |
| CTGCAATCGGGTGCGGACAT+TGG | - | chr1.3:22336629-22336648 | MS.gene91133:intron | 60.0% | |
| GCAGCTGGGTTGTTAGGCCT+CGG | - | chr1.3:22336673-22336692 | MS.gene91133:intron | 60.0% | |
| GCGGCCGAATTCGAGTGAAC+CGG | + | chr1.3:22336788-22336807 | None:intergenic | 60.0% | |
| GGCCAATTGGGAGCCCAAAC+CGG | - | chr1.3:22336718-22336737 | MS.gene91133:intron | 60.0% | |
| GGGTGCGGACATTGGAACGA+GGG | - | chr1.3:22336637-22336656 | MS.gene91133:intron | 60.0% | |
| ! | CACCTACGGGCATTGCTTGG+CGG | + | chr1.3:22336807-22336826 | None:intergenic | 60.0% |
| !! | CTTGATAACGGTCCGCCCGA+TGG | + | chr1.3:22336605-22336624 | None:intergenic | 60.0% |
| CGGGTGCGGACATTGGAACG+AGG | - | chr1.3:22336636-22336655 | MS.gene91133:intron | 65.0% | |
| GCTGGGTTGTTAGGCCTCGG+AGG | - | chr1.3:22336676-22336695 | MS.gene91133:intron | 65.0% | |
| GCTTGCCGGAAAGGGAGGTG+TGG | - | chr1.3:22335526-22335545 | MS.gene91133:CDS | 65.0% | |
| GGGTTGTTAGGCCTCGGAGG+CGG | - | chr1.3:22336679-22336698 | MS.gene91133:intron | 65.0% | |
| ! | GCCCAAACCGGCGGAGCTTT+TGG | - | chr1.3:22336730-22336749 | MS.gene91133:intron | 65.0% |
| !! | CGCCGGTTTGGGCTCCCAAT+TGG | + | chr1.3:22336723-22336742 | None:intergenic | 65.0% |
| GGCCGCCAAGCAATGCCCGT+AGG | - | chr1.3:22336802-22336821 | MS.gene91133:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22335367 | 22337338 | 22335367 | ID=MS.gene91133 |
| chr1.3 | mRNA | 22335367 | 22337338 | 22335367 | ID=MS.gene91133.t1;Parent=MS.gene91133 |
| chr1.3 | exon | 22337119 | 22337338 | 22337119 | ID=MS.gene91133.t1.exon1;Parent=MS.gene91133.t1 |
| chr1.3 | CDS | 22337119 | 22337338 | 22337119 | ID=cds.MS.gene91133.t1;Parent=MS.gene91133.t1 |
| chr1.3 | exon | 22335367 | 22336127 | 22335367 | ID=MS.gene91133.t1.exon2;Parent=MS.gene91133.t1 |
| chr1.3 | CDS | 22335367 | 22336127 | 22335367 | ID=cds.MS.gene91133.t1;Parent=MS.gene91133.t1 |
| Gene Sequence |
| Protein sequence |
