Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92350.t1 | XP_003610633.1 | 96.4 | 446 | 13 | 2 | 1 | 445 | 1 | 444 | 4.70E-232 | 813.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92350.t1 | Q9LJN2 | 64.7 | 450 | 113 | 7 | 33 | 445 | 44 | 484 | 4.9e-137 | 489.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92350.t1 | G7K0Y3 | 96.4 | 446 | 13 | 2 | 1 | 445 | 1 | 444 | 3.4e-232 | 813.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92350 | MS.gene83528 | PPI |
| MS.gene92350 | MS.gene054723 | PPI |
| MS.gene92350 | MS.gene90372 | PPI |
| MS.gene92350 | MS.gene063967 | PPI |
| MS.gene92350 | MS.gene90371 | PPI |
| MS.gene92350 | MS.gene063969 | PPI |
| MS.gene92350 | MS.gene98061 | PPI |
| MS.gene92350 | MS.gene071246 | PPI |
| MS.gene92350 | MS.gene40853 | PPI |
| MS.gene92350 | MS.gene067486 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92350.t1 | MTR_5g005240 | 96.413 | 446 | 13 | 2 | 1 | 445 | 1 | 444 | 0.0 | 871 |
| MS.gene92350.t1 | MTR_1g106065 | 55.944 | 429 | 159 | 9 | 26 | 445 | 12 | 419 | 3.62e-149 | 431 |
| MS.gene92350.t1 | MTR_8g094880 | 44.783 | 460 | 169 | 7 | 17 | 443 | 15 | 422 | 6.84e-120 | 356 |
| MS.gene92350.t1 | MTR_8g094905 | 44.783 | 460 | 169 | 7 | 17 | 443 | 15 | 422 | 6.84e-120 | 356 |
| MS.gene92350.t1 | MTR_2g105270 | 46.137 | 453 | 198 | 9 | 8 | 444 | 24 | 446 | 8.97e-116 | 347 |
| MS.gene92350.t1 | MTR_5g045590 | 40.000 | 435 | 207 | 9 | 14 | 444 | 19 | 403 | 3.05e-95 | 293 |
| MS.gene92350.t1 | MTR_2g105270 | 48.747 | 359 | 144 | 6 | 23 | 366 | 39 | 372 | 2.33e-94 | 291 |
| MS.gene92350.t1 | MTR_8g088670 | 40.230 | 435 | 187 | 10 | 23 | 444 | 46 | 420 | 4.04e-94 | 290 |
| MS.gene92350.t1 | MTR_1g040495 | 40.521 | 422 | 182 | 8 | 26 | 439 | 5 | 365 | 7.14e-94 | 288 |
| MS.gene92350.t1 | MTR_2g105270 | 45.961 | 359 | 154 | 6 | 8 | 351 | 24 | 357 | 6.64e-85 | 265 |
| MS.gene92350.t1 | MTR_8g088670 | 38.416 | 341 | 143 | 7 | 23 | 351 | 46 | 331 | 8.42e-64 | 209 |
| MS.gene92350.t1 | MTR_8g088670 | 38.462 | 338 | 141 | 7 | 23 | 348 | 46 | 328 | 9.43e-64 | 209 |
| MS.gene92350.t1 | MTR_1g040475 | 44.737 | 190 | 98 | 3 | 36 | 223 | 20 | 204 | 2.59e-42 | 149 |
| MS.gene92350.t1 | MTR_2g100150 | 55.901 | 161 | 36 | 7 | 34 | 190 | 15 | 144 | 3.69e-39 | 139 |
| MS.gene92350.t1 | MTR_1g076210 | 48.980 | 147 | 68 | 3 | 301 | 444 | 246 | 388 | 1.98e-34 | 132 |
| MS.gene92350.t1 | MTR_1g093280 | 48.980 | 147 | 68 | 3 | 301 | 444 | 246 | 388 | 1.98e-34 | 132 |
| MS.gene92350.t1 | MTR_7g096170 | 48.175 | 137 | 61 | 3 | 302 | 436 | 155 | 283 | 2.22e-31 | 122 |
| MS.gene92350.t1 | MTR_7g096170 | 48.175 | 137 | 61 | 3 | 302 | 436 | 252 | 380 | 1.60e-30 | 122 |
| MS.gene92350.t1 | MTR_1g093370 | 50.420 | 119 | 56 | 1 | 326 | 444 | 51 | 166 | 7.28e-30 | 114 |
| MS.gene92350.t1 | MTR_1g076220 | 50.420 | 119 | 56 | 1 | 326 | 444 | 113 | 228 | 2.11e-29 | 115 |
| MS.gene92350.t1 | MTR_1g076220 | 56.000 | 50 | 22 | 0 | 187 | 236 | 53 | 102 | 2.22e-11 | 63.9 |
| MS.gene92350.t1 | MTR_7g096170 | 57.000 | 100 | 38 | 1 | 302 | 401 | 252 | 346 | 1.74e-28 | 115 |
| MS.gene92350.t1 | MTR_1g055050 | 53.968 | 126 | 39 | 4 | 118 | 243 | 35 | 141 | 9.10e-28 | 111 |
| MS.gene92350.t1 | MTR_2g059110 | 55.000 | 80 | 36 | 0 | 26 | 105 | 8 | 87 | 7.36e-23 | 93.2 |
| MS.gene92350.t1 | MTR_2g059120 | 62.121 | 66 | 25 | 0 | 40 | 105 | 20 | 85 | 4.35e-20 | 85.1 |
| MS.gene92350.t1 | MTR_7g096170 | 65.079 | 63 | 17 | 1 | 302 | 364 | 252 | 309 | 2.23e-16 | 80.1 |
| MS.gene92350.t1 | MTR_1g040455 | 38.298 | 94 | 55 | 1 | 351 | 444 | 7 | 97 | 6.60e-15 | 70.9 |
| MS.gene92350.t1 | MTR_2g084565 | 23.301 | 412 | 219 | 13 | 40 | 444 | 123 | 444 | 4.20e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92350.t1 | AT3G19640 | 64.000 | 450 | 110 | 7 | 36 | 445 | 47 | 484 | 0.0 | 527 |
| MS.gene92350.t1 | AT1G80900 | 45.077 | 457 | 203 | 8 | 1 | 444 | 19 | 440 | 1.96e-114 | 343 |
| MS.gene92350.t1 | AT1G80900 | 45.077 | 457 | 203 | 8 | 1 | 444 | 19 | 440 | 1.96e-114 | 343 |
| MS.gene92350.t1 | AT1G16010 | 46.591 | 440 | 178 | 10 | 23 | 444 | 40 | 440 | 5.09e-114 | 342 |
| MS.gene92350.t1 | AT1G16010 | 46.591 | 440 | 178 | 10 | 23 | 444 | 40 | 440 | 5.09e-114 | 342 |
| MS.gene92350.t1 | AT1G16010 | 46.591 | 440 | 178 | 10 | 23 | 444 | 40 | 440 | 5.09e-114 | 342 |
| MS.gene92350.t1 | AT5G09690 | 43.721 | 430 | 181 | 6 | 19 | 444 | 12 | 384 | 9.90e-104 | 314 |
| MS.gene92350.t1 | AT5G09690 | 43.721 | 430 | 181 | 6 | 19 | 444 | 23 | 395 | 1.46e-103 | 313 |
| MS.gene92350.t1 | AT5G09690 | 46.253 | 387 | 150 | 5 | 19 | 401 | 23 | 355 | 4.64e-100 | 304 |
| MS.gene92350.t1 | AT3G58970 | 41.055 | 436 | 202 | 7 | 17 | 444 | 46 | 434 | 1.45e-99 | 305 |
| MS.gene92350.t1 | AT2G03620 | 40.952 | 420 | 208 | 8 | 25 | 444 | 40 | 419 | 1.14e-93 | 289 |
| MS.gene92350.t1 | AT2G03620 | 40.952 | 420 | 208 | 8 | 25 | 444 | 40 | 419 | 1.14e-93 | 289 |
| MS.gene92350.t1 | AT5G09690 | 45.355 | 366 | 136 | 5 | 19 | 377 | 12 | 320 | 1.68e-89 | 275 |
| MS.gene92350.t1 | AT5G09690 | 45.961 | 359 | 140 | 4 | 19 | 375 | 12 | 318 | 3.13e-89 | 274 |
| MS.gene92350.t1 | AT5G09690 | 45.961 | 359 | 140 | 4 | 19 | 375 | 12 | 318 | 4.22e-89 | 274 |
| MS.gene92350.t1 | AT5G09690 | 45.152 | 361 | 144 | 4 | 19 | 377 | 23 | 331 | 1.13e-85 | 266 |
| MS.gene92350.t1 | AT5G09690 | 45.152 | 361 | 144 | 4 | 19 | 377 | 23 | 331 | 1.13e-85 | 266 |
| MS.gene92350.t1 | AT5G09690 | 45.378 | 357 | 145 | 3 | 19 | 375 | 23 | 329 | 2.06e-85 | 265 |
| MS.gene92350.t1 | AT5G09690 | 38.785 | 428 | 190 | 8 | 19 | 444 | 12 | 369 | 1.69e-73 | 235 |
| MS.gene92350.t1 | AT4G28580 | 33.487 | 433 | 204 | 11 | 27 | 445 | 46 | 408 | 7.58e-67 | 219 |
| MS.gene92350.t1 | AT5G09690 | 53.881 | 219 | 93 | 2 | 19 | 235 | 23 | 235 | 1.03e-66 | 215 |
| MS.gene92350.t1 | AT5G09690 | 53.881 | 219 | 93 | 2 | 19 | 235 | 23 | 235 | 1.03e-66 | 215 |
| MS.gene92350.t1 | AT5G09690 | 53.881 | 219 | 93 | 2 | 19 | 235 | 23 | 235 | 1.03e-66 | 215 |
| MS.gene92350.t1 | AT5G09690 | 53.917 | 217 | 96 | 1 | 19 | 235 | 12 | 224 | 1.20e-66 | 215 |
| MS.gene92350.t1 | AT5G09720 | 48.837 | 215 | 102 | 2 | 23 | 235 | 8 | 216 | 6.63e-58 | 192 |
| MS.gene92350.t1 | AT5G09720 | 48.837 | 215 | 102 | 2 | 23 | 235 | 8 | 216 | 6.63e-58 | 192 |
| MS.gene92350.t1 | AT5G64560 | 47.794 | 136 | 67 | 2 | 309 | 444 | 261 | 392 | 7.83e-32 | 125 |
| MS.gene92350.t1 | AT5G64560 | 50.806 | 124 | 44 | 3 | 309 | 432 | 261 | 367 | 3.31e-29 | 118 |
| MS.gene92350.t1 | AT5G22830 | 29.016 | 193 | 118 | 4 | 39 | 227 | 135 | 312 | 2.63e-11 | 65.9 |
| MS.gene92350.t1 | AT5G22830 | 29.016 | 193 | 118 | 4 | 39 | 227 | 135 | 312 | 2.63e-11 | 65.9 |
Find 122 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGGTGCTTCGAATTTA+AGG | 0.165870 | 5.1:-363993 | MS.gene92350:CDS |
| ACGCATGATGGCGTGCTTTC+CGG | 0.208340 | 5.1:+364743 | None:intergenic |
| AGCCGTTTGGTTGCGATTAC+TGG | 0.222757 | 5.1:-364291 | MS.gene92350:CDS |
| GAAGATTAGTACTCTCAATT+TGG | 0.225739 | 5.1:-364334 | MS.gene92350:CDS |
| ACTGTTGGCGGCGGCACTGC+TGG | 0.245438 | 5.1:-362642 | MS.gene92350:CDS |
| TGAAGCAGCTTGTAGTGTTT+TGG | 0.284919 | 5.1:-364415 | MS.gene92350:CDS |
| ATCGCTACCGTTGGCGTTAC+CGG | 0.300032 | 5.1:+364875 | None:intergenic |
| ATATCGTTGGAAGCGGGTTT+AGG | 0.335773 | 5.1:-364075 | MS.gene92350:CDS |
| GTGCAAGCACAAACGCTTGC+TGG | 0.343936 | 5.1:-362586 | MS.gene92350:CDS |
| GTACCTTTCTTCCGAATTGC+CGG | 0.346470 | 5.1:+364822 | None:intergenic |
| TCCTACCCTTCCACCGTTCT+CGG | 0.346952 | 5.1:-364672 | MS.gene92350:CDS |
| AGTGCCTTCGTTGTTGTTGC+TGG | 0.353794 | 5.1:-362735 | MS.gene92350:CDS |
| CTGTTGGCGGCGGCACTGCT+GGG | 0.366005 | 5.1:-362641 | MS.gene92350:CDS |
| TGCTCCTCGTCCTGATAATC+AGG | 0.376856 | 5.1:-364499 | MS.gene92350:CDS |
| TGAGAATCTTCCTGATTATC+AGG | 0.379240 | 5.1:+364489 | None:intergenic |
| GTTTGGTGCTTCGAATTTAA+GGG | 0.389449 | 5.1:-363992 | MS.gene92350:CDS |
| CTGTTTGATGATAAATTGTA+TGG | 0.401637 | 5.1:-362684 | MS.gene92350:CDS |
| CAAGCGTTTGTGCTTGCACC+AGG | 0.405920 | 5.1:+362590 | None:intergenic |
| TGCTCTTTCTCTTCCGAGAA+CGG | 0.416716 | 5.1:+364659 | None:intergenic |
| TGCACGTGACCTTCGAATCC+TGG | 0.419970 | 5.1:-364706 | MS.gene92350:CDS |
| GATGTTGATGTTAATCAAAC+TGG | 0.433420 | 5.1:-364111 | MS.gene92350:CDS |
| GAAGTCACTTCAACAGCAAT+TGG | 0.436400 | 5.1:-364190 | MS.gene92350:CDS |
| AGCAACCACATACAAGAATA+TGG | 0.438257 | 5.1:+362617 | None:intergenic |
| ACAGAACCATCTTCTCCAAA+TGG | 0.439397 | 5.1:-362790 | MS.gene92350:CDS |
| CCGCCGCCGTACCGGCAATT+CGG | 0.439847 | 5.1:-364833 | MS.gene92350:CDS |
| CTCGATTACCTGTGCTTCGC+CGG | 0.441216 | 5.1:+364767 | None:intergenic |
| CTCCTCAACATCAAGCTTAG+TGG | 0.445396 | 5.1:+363927 | None:intergenic |
| TGTATGTGGTTGCTATTGCC+TGG | 0.445914 | 5.1:-362608 | MS.gene92350:CDS |
| AATTCTAGAGAGCAAATGTT+TGG | 0.448954 | 5.1:-364009 | MS.gene92350:CDS |
| TGACTCCCATTTGGAGAAGA+TGG | 0.450914 | 5.1:+362784 | None:intergenic |
| GCTTGATGATGATGAAGATA+TGG | 0.464583 | 5.1:-364232 | MS.gene92350:CDS |
| AACAGCTGCCGCCGCCGTAC+CGG | 0.467572 | 5.1:-364841 | MS.gene92350:CDS |
| TGAGGAGCTTGAGATGCTCT+TGG | 0.467583 | 5.1:-363911 | MS.gene92350:CDS |
| AGGAGGAGAGGTGAATTATG+AGG | 0.467721 | 5.1:-364049 | MS.gene92350:CDS |
| TCCGTTTGAATTCGTTGCGC+TGG | 0.471296 | 5.1:-364448 | MS.gene92350:CDS |
| CATGTTGACCACGGCAACTC+TGG | 0.474836 | 5.1:-362763 | MS.gene92350:CDS |
| GAGAAGAAGAACTTCGTTTG+CGG | 0.477402 | 5.1:+364599 | None:intergenic |
| GCCGTTTGGTTGCGATTACT+GGG | 0.478784 | 5.1:-364290 | MS.gene92350:CDS |
| GGTGAATTATGAGGAGGATG+AGG | 0.479462 | 5.1:-364040 | MS.gene92350:CDS |
| TTCGTGATGACGAAGAATCC+TGG | 0.480391 | 5.1:+364530 | None:intergenic |
| GGTAGGAGAGGAGAGGGTCC+AGG | 0.480489 | 5.1:+364688 | None:intergenic |
| GAGTTTATGTGGACTGTTGG+CGG | 0.482690 | 5.1:-362654 | MS.gene92350:CDS |
| GAAGCGGGTTTAGGAGGAGG+AGG | 0.484156 | 5.1:-364066 | MS.gene92350:CDS |
| CCGAATTGCCGGTACGGCGG+CGG | 0.484334 | 5.1:+364833 | None:intergenic |
| CGTCAATGGCTGGTTGTTGA+CGG | 0.484415 | 5.1:-364792 | MS.gene92350:CDS |
| CACGCCATCATGCGTCGTAC+CGG | 0.485557 | 5.1:-364735 | MS.gene92350:CDS |
| TTGGAAGCGGGTTTAGGAGG+AGG | 0.490530 | 5.1:-364069 | MS.gene92350:CDS |
| GGGTTTAGGAGGAGGAGGAG+AGG | 0.493637 | 5.1:-364061 | MS.gene92350:CDS |
| TGGTCAACATGACTCCCATT+TGG | 0.493890 | 5.1:+362775 | None:intergenic |
| AAGGTACAAGCGTTCGTCAA+TGG | 0.506236 | 5.1:-364806 | MS.gene92350:CDS |
| TTATCATGAACATCATGATC+AGG | 0.508556 | 5.1:+364135 | None:intergenic |
| AGGATTCGAAGGTCACGTGC+AGG | 0.509325 | 5.1:+364708 | None:intergenic |
| TGGGACCATATTCTTGTATG+TGG | 0.512820 | 5.1:-362622 | MS.gene92350:CDS |
| CAGAACCATCTTCTCCAAAT+GGG | 0.517721 | 5.1:-362789 | MS.gene92350:CDS |
| TTTGGTTGCGATTACTGGGA+GGG | 0.518348 | 5.1:-364286 | MS.gene92350:CDS |
| AAGGTCACGTGCAGGGAGGC+CGG | 0.519707 | 5.1:+364716 | None:intergenic |
| TCGTCAGATTAAGAGCCGTT+TGG | 0.523284 | 5.1:-364304 | MS.gene92350:CDS |
| TCGTTCAAGAGCTTCAAGCC+AGG | 0.526920 | 5.1:-364548 | MS.gene92350:CDS |
| TACAAGCGTTCGTCAATGGC+TGG | 0.527925 | 5.1:-364802 | MS.gene92350:CDS |
| TGCTGAGATATCGTTGGAAG+CGG | 0.529462 | 5.1:-364082 | MS.gene92350:CDS |
| TGGCTGGTTGTTGACGGCAC+CGG | 0.538585 | 5.1:-364786 | MS.gene92350:CDS |
| ACGCCAACGGTAGCGATGAC+CGG | 0.540694 | 5.1:-364869 | MS.gene92350:CDS |
| TGACGGCACCGGCGAAGCAC+AGG | 0.542644 | 5.1:-364775 | MS.gene92350:CDS |
| TCCCAGTAATCGCAACCAAA+CGG | 0.543100 | 5.1:+364289 | None:intergenic |
| TCTCTTCCGAGAACGGTGGA+AGG | 0.543564 | 5.1:+364666 | None:intergenic |
| TTCAACAGTGTCTTCATCAG+AGG | 0.545221 | 5.1:+364161 | None:intergenic |
| GAAGTCAATTTATCAAGCGC+AGG | 0.545824 | 5.1:+364357 | None:intergenic |
| GCTGAGATATCGTTGGAAGC+GGG | 0.545841 | 5.1:-364081 | MS.gene92350:CDS |
| CACCACTAAGCTTGATGTTG+AGG | 0.552846 | 5.1:-363929 | MS.gene92350:CDS |
| TCCAGCGCAACGAATTCAAA+CGG | 0.553760 | 5.1:+364447 | None:intergenic |
| GGAGAGGGTCCAGGATTCGA+AGG | 0.557929 | 5.1:+364697 | None:intergenic |
| TTTCTTCCGAATTGCCGGTA+CGG | 0.558235 | 5.1:+364827 | None:intergenic |
| AAGATGCGAGGAAACGTCAC+CGG | 0.560599 | 5.1:-364894 | MS.gene92350:CDS |
| ATGGGATGAGAGAGTTTATG+TGG | 0.562365 | 5.1:-362665 | MS.gene92350:CDS |
| CCACCGGTCATCGCTACCGT+TGG | 0.563218 | 5.1:+364866 | None:intergenic |
| CTCTTGAACGAAAGGAGTAA+CGG | 0.563746 | 5.1:+364560 | None:intergenic |
| TCGTTGGAAGCGGGTTTAGG+AGG | 0.564325 | 5.1:-364072 | MS.gene92350:CDS |
| GAAGCACAGGTAATCGAGGC+CGG | 0.564508 | 5.1:-364762 | MS.gene92350:CDS |
| GCTTACTTTGTTCAGATCGA+CGG | 0.566014 | 5.1:-363886 | MS.gene92350:CDS |
| GCTTGAAGCTCTTGAACGAA+AGG | 0.572210 | 5.1:+364552 | None:intergenic |
| CTCTTCCGAGAACGGTGGAA+GGG | 0.575974 | 5.1:+364667 | None:intergenic |
| GTACCGGCAATTCGGAAGAA+AGG | 0.580132 | 5.1:-364825 | MS.gene92350:CDS |
| TGGAAGGGTAGGAGAGGAGA+GGG | 0.581421 | 5.1:+364682 | None:intergenic |
| ACCAGGTGCTGAGATATCGT+TGG | 0.584563 | 5.1:-364088 | MS.gene92350:CDS |
| AGGAGAGGTGAATTATGAGG+AGG | 0.586365 | 5.1:-364046 | MS.gene92350:CDS |
| GAGGCCGGTACGACGCATGA+TGG | 0.587077 | 5.1:+364731 | None:intergenic |
| CGGCGGCAGCTGTTCCCCAC+CGG | 0.591719 | 5.1:+364850 | None:intergenic |
| AGAGAGTTTATGTGGACTGT+TGG | 0.592926 | 5.1:-362657 | MS.gene92350:CDS |
| CAACGGTAGCGATGACCGGT+GGG | 0.594792 | 5.1:-364865 | MS.gene92350:CDS |
| GGAGAGTGAAGCAAAGACGC+TGG | 0.597867 | 5.1:-364394 | MS.gene92350:CDS |
| TTTATGTGGACTGTTGGCGG+CGG | 0.601940 | 5.1:-362651 | MS.gene92350:CDS |
| AGCAAAGACGCTGGAACAAG+AGG | 0.602892 | 5.1:-364385 | MS.gene92350:CDS |
| CTTCCGAATTGCCGGTACGG+CGG | 0.605828 | 5.1:+364830 | None:intergenic |
| CACTCTCAATAAGCTCTCAA+CGG | 0.611809 | 5.1:-363863 | MS.gene92350:intron |
| GGATTCGAAGGTCACGTGCA+GGG | 0.614484 | 5.1:+364709 | None:intergenic |
| TCCAACGATATCTCAGCACC+TGG | 0.620597 | 5.1:+364087 | None:intergenic |
| AACGTCACCGGTAACGCCAA+CGG | 0.620696 | 5.1:-364882 | MS.gene92350:CDS |
| TCCGAGAACGGTGGAAGGGT+AGG | 0.621308 | 5.1:+364671 | None:intergenic |
| TGTTTGATGATAAATTGTAT+GGG | 0.621429 | 5.1:-362683 | MS.gene92350:CDS |
| GAACGGTGGAAGGGTAGGAG+AGG | 0.622247 | 5.1:+364676 | None:intergenic |
| CCAACGGTAGCGATGACCGG+TGG | 0.624688 | 5.1:-364866 | MS.gene92350:CDS |
| GTTGACCACGGCAACTCTGG+TGG | 0.627812 | 5.1:-362760 | MS.gene92350:CDS |
| CTCAACATCAAGCTTAGTGG+TGG | 0.628847 | 5.1:+363930 | None:intergenic |
| TAGTGCTTGCACGTGTTCCG+CGG | 0.631370 | 5.1:+363965 | None:intergenic |
| GTTTGGTTGCGATTACTGGG+AGG | 0.636774 | 5.1:-364287 | MS.gene92350:CDS |
| ATTATCAGGACGAGGAGCAG+TGG | 0.639109 | 5.1:+364503 | None:intergenic |
| TCTTCCTGATTATCAGGACG+AGG | 0.641967 | 5.1:+364495 | None:intergenic |
| CGGCGAAGCACAGGTAATCG+AGG | 0.643846 | 5.1:-364766 | MS.gene92350:CDS |
| GTGGAAGGGTAGGAGAGGAG+AGG | 0.646101 | 5.1:+364681 | None:intergenic |
| TGAACGAAAGGAGTAACGGA+AGG | 0.650529 | 5.1:+364564 | None:intergenic |
| ACTTACCACCAGAGTTGCCG+TGG | 0.664332 | 5.1:+362755 | None:intergenic |
| GATGTTAATCAAACTGGACC+AGG | 0.673948 | 5.1:-364105 | MS.gene92350:CDS |
| AATACCAGCAACAACAACGA+AGG | 0.674729 | 5.1:+362731 | None:intergenic |
| AACGGTAGCGATGACCGGTG+GGG | 0.675836 | 5.1:-364864 | MS.gene92350:CDS |
| GATAATCAGGAAGATTCTCA+CGG | 0.676638 | 5.1:-364486 | MS.gene92350:CDS |
| TCTTTCTCTTCCGAGAACGG+TGG | 0.682175 | 5.1:+364662 | None:intergenic |
| AATGGGAGTCATGTTGACCA+CGG | 0.693986 | 5.1:-362772 | MS.gene92350:CDS |
| TTCGAAGGTCACGTGCAGGG+AGG | 0.702733 | 5.1:+364712 | None:intergenic |
| TCGAATTTAAGGGATAGCCG+CGG | 0.713074 | 5.1:-363982 | MS.gene92350:CDS |
| TGATGATGATGAAGATATGG+CGG | 0.716447 | 5.1:-364229 | MS.gene92350:CDS |
| GGAGTATGTTGATGACACAG+AGG | 0.741575 | 5.1:-362841 | MS.gene92350:CDS |
| AATCAGGAAGATTCTCACGG+CGG | 0.760544 | 5.1:-364483 | MS.gene92350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATGAGTATATATTA+TGG | - | chr5.1:364451-364470 | MS.gene92350:CDS | 10.0% |
| !! | AAATCAAGGAAATGTTAAAT+AGG | + | chr5.1:363642-363661 | None:intergenic | 20.0% |
| !! | AGATAATTATAATCAATCCA+AGG | + | chr5.1:364148-364167 | None:intergenic | 20.0% |
| !! | GATAAATTATAATCAATCCA+AGG | + | chr5.1:364419-364438 | None:intergenic | 20.0% |
| !! | TAATAGCAATTATATAAACC+AGG | + | chr5.1:364484-364503 | None:intergenic | 20.0% |
| !! | TATGAAAATTGTATCTTCAT+AGG | + | chr5.1:364177-364196 | None:intergenic | 20.0% |
| !!! | TGATTTTTCATAAACTAACT+TGG | - | chr5.1:364234-364253 | MS.gene92350:CDS | 20.0% |
| !!! | TGTTTGATGATAAATTGTAT+GGG | - | chr5.1:364789-364808 | MS.gene92350:CDS | 20.0% |
| !!! | TTTAACATTTCCTTGATTTT+AGG | - | chr5.1:363643-363662 | MS.gene92350:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+AGG | + | chr5.1:363977-363996 | None:intergenic | 25.0% |
| ! | AAAAATAAGCCAATCCAAAA+GGG | + | chr5.1:363976-363995 | None:intergenic | 25.0% |
| ! | ATATATTATGGTACAATACC+TGG | - | chr5.1:364463-364482 | MS.gene92350:CDS | 25.0% |
| ! | GTTATAGAAACCTAAAATCA+AGG | + | chr5.1:363656-363675 | None:intergenic | 25.0% |
| ! | TATGTGATATGATGTTACTA+TGG | - | chr5.1:364510-364529 | MS.gene92350:CDS | 25.0% |
| !! | CTGTTTGATGATAAATTGTA+TGG | - | chr5.1:364788-364807 | MS.gene92350:CDS | 25.0% |
| !!! | CATTAGTGTTTTTAACTTGT+TGG | + | chr5.1:363702-363721 | None:intergenic | 25.0% |
| AAATCAGCTTATGAAGTAGT+AGG | - | chr5.1:364073-364092 | MS.gene92350:CDS | 30.0% | |
| ATGTCACTAGATAAGTTCAA+GGG | - | chr5.1:363950-363969 | MS.gene92350:CDS | 30.0% | |
| CAAGGAAATGTTAAATAGGA+AGG | + | chr5.1:363638-363657 | None:intergenic | 30.0% | |
| GAAGATTAGTACTCTCAATT+TGG | - | chr5.1:363138-363157 | MS.gene92350:intron | 30.0% | |
| GATGTTGATGTTAATCAAAC+TGG | - | chr5.1:363361-363380 | MS.gene92350:intron | 30.0% | |
| TATGTCACTAGATAAGTTCA+AGG | - | chr5.1:363949-363968 | MS.gene92350:CDS | 30.0% | |
| TCAAAAAGTGAGAGATGAAT+TGG | - | chr5.1:363210-363229 | MS.gene92350:intron | 30.0% | |
| TTATCATGAACATCATGATC+AGG | + | chr5.1:363340-363359 | None:intergenic | 30.0% | |
| ! | AATTCTAGAGAGCAAATGTT+TGG | - | chr5.1:363463-363482 | MS.gene92350:intron | 30.0% |
| ! | CTCTTTGGATTGACTTATTT+GGG | + | chr5.1:364344-364363 | None:intergenic | 30.0% |
| ! | TCTCTTTGGATTGACTTATT+TGG | + | chr5.1:364345-364364 | None:intergenic | 30.0% |
| ! | TCTTTGGATTGACTTATTTG+GGG | + | chr5.1:364343-364362 | None:intergenic | 30.0% |
| ! | TTTTTGCTTTCTGATCTAGT+TGG | - | chr5.1:363741-363760 | MS.gene92350:intron | 30.0% |
| !! | GCTGATACTTTGTTATTTGT+TGG | - | chr5.1:364589-364608 | MS.gene92350:CDS | 30.0% |
| AAAAATAAGCCGATCCAAAC+GGG | - | chr5.1:364316-364335 | MS.gene92350:CDS | 35.0% | |
| AGCAACCACATACAAGAATA+TGG | + | chr5.1:364858-364877 | None:intergenic | 35.0% | |
| CAAAAATAAGCCGATCCAAA+CGG | - | chr5.1:364315-364334 | MS.gene92350:CDS | 35.0% | |
| CTTATTTCCACAAACTCACT+AGG | + | chr5.1:363861-363880 | None:intergenic | 35.0% | |
| GATAATCAGGAAGATTCTCA+CGG | - | chr5.1:362986-363005 | MS.gene92350:intron | 35.0% | |
| TGAGAATCTTCCTGATTATC+AGG | + | chr5.1:362986-363005 | None:intergenic | 35.0% | |
| ! | CAAAGTATCAGCAACAAAGA+AGG | + | chr5.1:364581-364600 | None:intergenic | 35.0% |
| ! | CACTTTATGGTTTGTACTTG+AGG | - | chr5.1:364122-364141 | MS.gene92350:CDS | 35.0% |
| ! | TGATGATGATGAAGATATGG+CGG | - | chr5.1:363243-363262 | MS.gene92350:intron | 35.0% |
| !! | GCTTGATGATGATGAAGATA+TGG | - | chr5.1:363240-363259 | MS.gene92350:intron | 35.0% |
| !! | GTTGTTGTTGCTGGTATTTT+TGG | - | chr5.1:364746-364765 | MS.gene92350:CDS | 35.0% |
| !! | GTTTGGTGCTTCGAATTTAA+GGG | - | chr5.1:363480-363499 | MS.gene92350:intron | 35.0% |
| !! | TGTTTGGTGCTTCGAATTTA+AGG | - | chr5.1:363479-363498 | MS.gene92350:intron | 35.0% |
| !!! | GTGTTTTTAACTTGTTGGAC+TGG | + | chr5.1:363697-363716 | None:intergenic | 35.0% |
| AATACCAGCAACAACAACGA+AGG | + | chr5.1:364744-364763 | None:intergenic | 40.0% | |
| ACAGAACCATCTTCTCCAAA+TGG | - | chr5.1:364682-364701 | MS.gene92350:CDS | 40.0% | |
| ATCGGTACTAAGAGTCTCTT+TGG | + | chr5.1:364359-364378 | None:intergenic | 40.0% | |
| ATGCTATCCTAGTGAGTTTG+TGG | - | chr5.1:363851-363870 | MS.gene92350:intron | 40.0% | |
| ATGGGATGAGAGAGTTTATG+TGG | - | chr5.1:364807-364826 | MS.gene92350:CDS | 40.0% | |
| CACTCTCAATAAGCTCTCAA+CGG | - | chr5.1:363609-363628 | MS.gene92350:intron | 40.0% | |
| CAGAACCATCTTCTCCAAAT+GGG | - | chr5.1:364683-364702 | MS.gene92350:CDS | 40.0% | |
| CTCTTGAACGAAAGGAGTAA+CGG | + | chr5.1:362915-362934 | None:intergenic | 40.0% | |
| GAAGTCAATTTATCAAGCGC+AGG | + | chr5.1:363118-363137 | None:intergenic | 40.0% | |
| GAAGTCACTTCAACAGCAAT+TGG | - | chr5.1:363282-363301 | MS.gene92350:intron | 40.0% | |
| GAGAAGAAGAACTTCGTTTG+CGG | + | chr5.1:362876-362895 | None:intergenic | 40.0% | |
| GATGTTAATCAAACTGGACC+AGG | - | chr5.1:363367-363386 | MS.gene92350:intron | 40.0% | |
| GCTTACTTTGTTCAGATCGA+CGG | - | chr5.1:363586-363605 | MS.gene92350:intron | 40.0% | |
| TGGGACCATATTCTTGTATG+TGG | - | chr5.1:364850-364869 | MS.gene92350:CDS | 40.0% | |
| TTCAACAGTGTCTTCATCAG+AGG | + | chr5.1:363314-363333 | None:intergenic | 40.0% | |
| ! | AGAGAGTTTATGTGGACTGT+TGG | - | chr5.1:364815-364834 | MS.gene92350:CDS | 40.0% |
| ! | TGAAGCAGCTTGTAGTGTTT+TGG | - | chr5.1:363057-363076 | MS.gene92350:intron | 40.0% |
| AAGGTACAAGCGTTCGTCAA+TGG | - | chr5.1:362666-362685 | MS.gene92350:CDS | 45.0% | |
| AATCAGGAAGATTCTCACGG+CGG | - | chr5.1:362989-363008 | MS.gene92350:intron | 45.0% | |
| AATGGGAGTCATGTTGACCA+CGG | - | chr5.1:364700-364719 | MS.gene92350:CDS | 45.0% | |
| AGGAGAGGTGAATTATGAGG+AGG | - | chr5.1:363426-363445 | MS.gene92350:intron | 45.0% | |
| AGGAGGAGAGGTGAATTATG+AGG | - | chr5.1:363423-363442 | MS.gene92350:intron | 45.0% | |
| CACCACTAAGCTTGATGTTG+AGG | - | chr5.1:363543-363562 | MS.gene92350:intron | 45.0% | |
| CTCAACATCAAGCTTAGTGG+TGG | + | chr5.1:363545-363564 | None:intergenic | 45.0% | |
| CTCCTCAACATCAAGCTTAG+TGG | + | chr5.1:363548-363567 | None:intergenic | 45.0% | |
| GCTTGAAGCTCTTGAACGAA+AGG | + | chr5.1:362923-362942 | None:intergenic | 45.0% | |
| GGTGAATTATGAGGAGGATG+AGG | - | chr5.1:363432-363451 | MS.gene92350:intron | 45.0% | |
| GTACCTTTCTTCCGAATTGC+CGG | + | chr5.1:362653-362672 | None:intergenic | 45.0% | |
| TCCAGCGCAACGAATTCAAA+CGG | + | chr5.1:363028-363047 | None:intergenic | 45.0% | |
| TCCCAGTAATCGCAACCAAA+CGG | + | chr5.1:363186-363205 | None:intergenic | 45.0% | |
| TCGAATTTAAGGGATAGCCG+CGG | - | chr5.1:363490-363509 | MS.gene92350:intron | 45.0% | |
| TCGTCAGATTAAGAGCCGTT+TGG | - | chr5.1:363168-363187 | MS.gene92350:intron | 45.0% | |
| TCTTCCTGATTATCAGGACG+AGG | + | chr5.1:362980-362999 | None:intergenic | 45.0% | |
| TGACTCCCATTTGGAGAAGA+TGG | + | chr5.1:364691-364710 | None:intergenic | 45.0% | |
| TGCTCTTTCTCTTCCGAGAA+CGG | + | chr5.1:362816-362835 | None:intergenic | 45.0% | |
| TGCTGAGATATCGTTGGAAG+CGG | - | chr5.1:363390-363409 | MS.gene92350:intron | 45.0% | |
| TGGTCAACATGACTCCCATT+TGG | + | chr5.1:364700-364719 | None:intergenic | 45.0% | |
| TTTCTTCCGAATTGCCGGTA+CGG | + | chr5.1:362648-362667 | None:intergenic | 45.0% | |
| TTTGGTTGCGATTACTGGGA+GGG | - | chr5.1:363186-363205 | MS.gene92350:intron | 45.0% | |
| ! | ATATCGTTGGAAGCGGGTTT+AGG | - | chr5.1:363397-363416 | MS.gene92350:intron | 45.0% |
| ! | ATGGTTTGTACTTGAGGCCT+TGG | - | chr5.1:364128-364147 | MS.gene92350:CDS | 45.0% |
| ! | GACTTGATGGTCTGTACTTG+AGG | - | chr5.1:364393-364412 | MS.gene92350:CDS | 45.0% |
| ! | GAGTTTATGTGGACTGTTGG+CGG | - | chr5.1:364818-364837 | MS.gene92350:CDS | 45.0% |
| ! | GATAAGTTCAAGGGCCCTTT+TGG | - | chr5.1:363959-363978 | MS.gene92350:CDS | 45.0% |
| ! | GGTTGTCTTGTTGAAGCTGA+GGG | - | chr5.1:364610-364629 | MS.gene92350:CDS | 45.0% |
| ! | TGAACGAAAGGAGTAACGGA+AGG | + | chr5.1:362911-362930 | None:intergenic | 45.0% |
| ! | TGGTTGTCTTGTTGAAGCTG+AGG | - | chr5.1:364609-364628 | MS.gene92350:CDS | 45.0% |
| ! | TGTATGTGGTTGCTATTGCC+TGG | - | chr5.1:364864-364883 | MS.gene92350:CDS | 45.0% |
| ! | TTCGTGATGACGAAGAATCC+TGG | + | chr5.1:362945-362964 | None:intergenic | 45.0% |
| !! | GGAGTATGTTGATGACACAG+AGG | - | chr5.1:364631-364650 | MS.gene92350:CDS | 45.0% |
| ACCATCAAGTCTTCTCCTCG+CGG | + | chr5.1:364384-364403 | None:intergenic | 50.0% | |
| AGCAAAGACGCTGGAACAAG+AGG | - | chr5.1:363087-363106 | MS.gene92350:intron | 50.0% | |
| AGCCGTTTGGTTGCGATTAC+TGG | - | chr5.1:363181-363200 | MS.gene92350:intron | 50.0% | |
| AGTCTTCTCCTCGCGGTAAT+CGG | + | chr5.1:364377-364396 | None:intergenic | 50.0% | |
| ATGGTCTGTACTTGAGGCCT+TGG | - | chr5.1:364399-364418 | MS.gene92350:CDS | 50.0% | |
| ATTATCAGGACGAGGAGCAG+TGG | + | chr5.1:362972-362991 | None:intergenic | 50.0% | |
| GCCGTTTGGTTGCGATTACT+GGG | - | chr5.1:363182-363201 | MS.gene92350:intron | 50.0% | |
| GCTGAGATATCGTTGGAAGC+GGG | - | chr5.1:363391-363410 | MS.gene92350:intron | 50.0% | |
| GTTTGGTTGCGATTACTGGG+AGG | - | chr5.1:363185-363204 | MS.gene92350:intron | 50.0% | |
| TACAAGCGTTCGTCAATGGC+TGG | - | chr5.1:362670-362689 | MS.gene92350:CDS | 50.0% | |
| TCCAACGATATCTCAGCACC+TGG | + | chr5.1:363388-363407 | None:intergenic | 50.0% | |
| TCCGTTTGAATTCGTTGCGC+TGG | - | chr5.1:363024-363043 | MS.gene92350:intron | 50.0% | |
| TCGTTCAAGAGCTTCAAGCC+AGG | - | chr5.1:362924-362943 | MS.gene92350:intron | 50.0% | |
| TCTTTCTCTTCCGAGAACGG+TGG | + | chr5.1:362813-362832 | None:intergenic | 50.0% | |
| TGAGGAGCTTGAGATGCTCT+TGG | - | chr5.1:363561-363580 | MS.gene92350:intron | 50.0% | |
| TGCTCCTCGTCCTGATAATC+AGG | - | chr5.1:362973-362992 | MS.gene92350:intron | 50.0% | |
| ! | ACCATAAAGTGCTCTCCGCT+CGG | + | chr5.1:364113-364132 | None:intergenic | 50.0% |
| ! | AGTGCCTTCGTTGTTGTTGC+TGG | - | chr5.1:364737-364756 | MS.gene92350:CDS | 50.0% |
| ! | ATTTGGGGTCCCGTTTGGAT+CGG | + | chr5.1:364328-364347 | None:intergenic | 50.0% |
| ! | CGTCAATGGCTGGTTGTTGA+CGG | - | chr5.1:362680-362699 | MS.gene92350:CDS | 50.0% |
| ! | GACTTATTTGGGGTCCCGTT+TGG | + | chr5.1:364333-364352 | None:intergenic | 50.0% |
| ! | GTACCGGCAATTCGGAAGAA+AGG | - | chr5.1:362647-362666 | MS.gene92350:CDS | 50.0% |
| ! | GTTCAAGGGCCCTTTTGGAT+TGG | - | chr5.1:363964-363983 | MS.gene92350:CDS | 50.0% |
| ! | TTTATGTGGACTGTTGGCGG+CGG | - | chr5.1:364821-364840 | MS.gene92350:CDS | 50.0% |
| !! | ACCAGGTGCTGAGATATCGT+TGG | - | chr5.1:363384-363403 | MS.gene92350:intron | 50.0% |
| !! | TCTTAGTACCGATTACCGCG+AGG | - | chr5.1:364366-364385 | MS.gene92350:CDS | 50.0% |
| AACGTCACCGGTAACGCCAA+CGG | - | chr5.1:362590-362609 | MS.gene92350:CDS | 55.0% | |
| ACCGCGAGGAGAAGACTTGA+TGG | - | chr5.1:364380-364399 | MS.gene92350:CDS | 55.0% | |
| ACTTACCACCAGAGTTGCCG+TGG | + | chr5.1:364720-364739 | None:intergenic | 55.0% | |
| AGGATTCGAAGGTCACGTGC+AGG | + | chr5.1:362767-362786 | None:intergenic | 55.0% | |
| ATCGCTACCGTTGGCGTTAC+CGG | + | chr5.1:362600-362619 | None:intergenic | 55.0% | |
| CAAGCGTTTGTGCTTGCACC+AGG | + | chr5.1:364885-364904 | None:intergenic | 55.0% | |
| CATGTTGACCACGGCAACTC+TGG | - | chr5.1:364709-364728 | MS.gene92350:CDS | 55.0% | |
| CTCGATTACCTGTGCTTCGC+CGG | + | chr5.1:362708-362727 | None:intergenic | 55.0% | |
| CTCTTCCGAGAACGGTGGAA+GGG | + | chr5.1:362808-362827 | None:intergenic | 55.0% | |
| GAAGCACAGGTAATCGAGGC+CGG | - | chr5.1:362710-362729 | MS.gene92350:CDS | 55.0% | |
| GGAGAGTGAAGCAAAGACGC+TGG | - | chr5.1:363078-363097 | MS.gene92350:intron | 55.0% | |
| GGATTCGAAGGTCACGTGCA+GGG | + | chr5.1:362766-362785 | None:intergenic | 55.0% | |
| GTGCAAGCACAAACGCTTGC+TGG | - | chr5.1:364886-364905 | MS.gene92350:CDS | 55.0% | |
| TAGTGCTTGCACGTGTTCCG+CGG | + | chr5.1:363510-363529 | None:intergenic | 55.0% | |
| TCCTACCCTTCCACCGTTCT+CGG | - | chr5.1:362800-362819 | MS.gene92350:CDS | 55.0% | |
| TCTCTTCCGAGAACGGTGGA+AGG | + | chr5.1:362809-362828 | None:intergenic | 55.0% | |
| TGCACGTGACCTTCGAATCC+TGG | - | chr5.1:362766-362785 | MS.gene92350:CDS | 55.0% | |
| TGGAAGGGTAGGAGAGGAGA+GGG | + | chr5.1:362793-362812 | None:intergenic | 55.0% | |
| ! | ACGCATGATGGCGTGCTTTC+CGG | + | chr5.1:362732-362751 | None:intergenic | 55.0% |
| ! | TCGTTGGAAGCGGGTTTAGG+AGG | - | chr5.1:363400-363419 | MS.gene92350:intron | 55.0% |
| ! | TTGGAAGCGGGTTTAGGAGG+AGG | - | chr5.1:363403-363422 | MS.gene92350:intron | 55.0% |
| !! | ACCGAGCGGAGAGCACTTTA+TGG | - | chr5.1:364109-364128 | MS.gene92350:CDS | 55.0% |
| AACGGTAGCGATGACCGGTG+GGG | - | chr5.1:362608-362627 | MS.gene92350:CDS | 60.0% | |
| ACGCCAACGGTAGCGATGAC+CGG | - | chr5.1:362603-362622 | MS.gene92350:CDS | 60.0% | |
| AGTGCTCTCCGCTCGGTAGT+CGG | + | chr5.1:364106-364125 | None:intergenic | 60.0% | |
| CAACGGTAGCGATGACCGGT+GGG | - | chr5.1:362607-362626 | MS.gene92350:CDS | 60.0% | |
| CACGCCATCATGCGTCGTAC+CGG | - | chr5.1:362737-362756 | MS.gene92350:CDS | 60.0% | |
| CGGCGAAGCACAGGTAATCG+AGG | - | chr5.1:362706-362725 | MS.gene92350:CDS | 60.0% | |
| CTTCCGAATTGCCGGTACGG+CGG | + | chr5.1:362645-362664 | None:intergenic | 60.0% | |
| GAACGGTGGAAGGGTAGGAG+AGG | + | chr5.1:362799-362818 | None:intergenic | 60.0% | |
| GGAGAGGGTCCAGGATTCGA+AGG | + | chr5.1:362778-362797 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGAGGAGGAG+AGG | - | chr5.1:363411-363430 | MS.gene92350:intron | 60.0% | |
| GTGGAAGGGTAGGAGAGGAG+AGG | + | chr5.1:362794-362813 | None:intergenic | 60.0% | |
| GTTGACCACGGCAACTCTGG+TGG | - | chr5.1:364712-364731 | MS.gene92350:CDS | 60.0% | |
| TCCGAGAACGGTGGAAGGGT+AGG | + | chr5.1:362804-362823 | None:intergenic | 60.0% | |
| TTCGAAGGTCACGTGCAGGG+AGG | + | chr5.1:362763-362782 | None:intergenic | 60.0% | |
| ! | GAAGCGGGTTTAGGAGGAGG+AGG | - | chr5.1:363406-363425 | MS.gene92350:intron | 60.0% |
| ! | TGGCTGGTTGTTGACGGCAC+CGG | - | chr5.1:362686-362705 | MS.gene92350:CDS | 60.0% |
| !! | GACGAGTACCGACTACCGAG+CGG | - | chr5.1:364095-364114 | MS.gene92350:CDS | 60.0% |
| AAGGTCACGTGCAGGGAGGC+CGG | + | chr5.1:362759-362778 | None:intergenic | 65.0% | |
| CCAACGGTAGCGATGACCGG+TGG | - | chr5.1:362606-362625 | MS.gene92350:CDS | 65.0% | |
| CCACCGGTCATCGCTACCGT+TGG | + | chr5.1:362609-362628 | None:intergenic | 65.0% | |
| GAGGCCGGTACGACGCATGA+TGG | + | chr5.1:362744-362763 | None:intergenic | 65.0% | |
| GGTAGGAGAGGAGAGGGTCC+AGG | + | chr5.1:362787-362806 | None:intergenic | 65.0% | |
| AACAGCTGCCGCCGCCGTAC+CGG | - | chr5.1:362631-362650 | MS.gene92350:CDS | 70.0% | |
| ACTGTTGGCGGCGGCACTGC+TGG | - | chr5.1:364830-364849 | MS.gene92350:CDS | 70.0% | |
| CCGAATTGCCGGTACGGCGG+CGG | + | chr5.1:362642-362661 | None:intergenic | 70.0% | |
| CTGTTGGCGGCGGCACTGCT+GGG | - | chr5.1:364831-364850 | MS.gene92350:CDS | 70.0% | |
| ! | CCGCCGCCGTACCGGCAATT+CGG | - | chr5.1:362639-362658 | MS.gene92350:CDS | 70.0% |
| !! | TGACGGCACCGGCGAAGCAC+AGG | - | chr5.1:362697-362716 | MS.gene92350:CDS | 70.0% |
| CGGCGGCAGCTGTTCCCCAC+CGG | + | chr5.1:362625-362644 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 362581 | 364913 | 362581 | ID=MS.gene92350 |
| chr5.1 | mRNA | 362581 | 364913 | 362581 | ID=MS.gene92350.t1;Parent=MS.gene92350 |
| chr5.1 | exon | 363864 | 364913 | 363864 | ID=MS.gene92350.t1.exon1;Parent=MS.gene92350.t1 |
| chr5.1 | CDS | 363864 | 364913 | 363864 | ID=cds.MS.gene92350.t1;Parent=MS.gene92350.t1 |
| chr5.1 | exon | 362581 | 362868 | 362581 | ID=MS.gene92350.t1.exon2;Parent=MS.gene92350.t1 |
| chr5.1 | CDS | 362581 | 362868 | 362581 | ID=cds.MS.gene92350.t1;Parent=MS.gene92350.t1 |
| Gene Sequence |
| Protein sequence |
