Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90371.t1 | XP_013465620.1 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 9.90E-246 | 859 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90371.t1 | Q9S9N4 | 82.6 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 5.4e-200 | 698.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90371.t1 | G7ZYX9 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 7.1e-246 | 859.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90371 | MS.gene40853 | PPI |
| MS.gene90371 | MS.gene054723 | PPI |
| MS.gene92350 | MS.gene90371 | PPI |
| MS.gene90371 | MS.gene024949 | PPI |
| MS.gene90371 | MS.gene063967 | PPI |
| MS.gene90371 | MS.gene063969 | PPI |
| MS.gene90371 | MS.gene98061 | PPI |
| MS.gene90371 | MS.gene046935 | PPI |
| MS.gene90371 | MS.gene40181 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90371.t1 | MTR_2g105270 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene90371.t1 | MTR_2g105270 | 99.731 | 372 | 1 | 0 | 1 | 372 | 1 | 372 | 0.0 | 754 |
| MS.gene90371.t1 | MTR_2g105270 | 99.440 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 0.0 | 724 |
| MS.gene90371.t1 | MTR_5g045590 | 52.941 | 425 | 152 | 5 | 31 | 447 | 20 | 404 | 8.47e-143 | 414 |
| MS.gene90371.t1 | MTR_5g005240 | 46.018 | 452 | 199 | 9 | 24 | 446 | 8 | 443 | 1.38e-115 | 346 |
| MS.gene90371.t1 | MTR_1g076210 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
| MS.gene90371.t1 | MTR_1g093280 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
| MS.gene90371.t1 | MTR_1g040495 | 43.846 | 390 | 171 | 7 | 51 | 437 | 15 | 359 | 1.28e-98 | 300 |
| MS.gene90371.t1 | MTR_1g106065 | 41.135 | 423 | 216 | 9 | 41 | 445 | 11 | 418 | 2.67e-94 | 291 |
| MS.gene90371.t1 | MTR_8g088670 | 42.647 | 408 | 193 | 9 | 43 | 446 | 50 | 420 | 2.57e-93 | 288 |
| MS.gene90371.t1 | MTR_8g094880 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
| MS.gene90371.t1 | MTR_8g094905 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
| MS.gene90371.t1 | MTR_7g096170 | 45.771 | 402 | 173 | 7 | 43 | 438 | 17 | 379 | 3.74e-91 | 281 |
| MS.gene90371.t1 | MTR_7g096170 | 46.114 | 386 | 164 | 6 | 43 | 423 | 17 | 363 | 1.34e-87 | 272 |
| MS.gene90371.t1 | MTR_7g096170 | 45.946 | 333 | 137 | 5 | 43 | 371 | 17 | 310 | 5.70e-70 | 224 |
| MS.gene90371.t1 | MTR_8g088670 | 42.089 | 316 | 148 | 6 | 43 | 357 | 50 | 331 | 1.01e-64 | 212 |
| MS.gene90371.t1 | MTR_8g088670 | 41.250 | 320 | 153 | 6 | 43 | 361 | 50 | 335 | 1.11e-64 | 212 |
| MS.gene90371.t1 | MTR_7g096170 | 49.237 | 262 | 107 | 5 | 179 | 438 | 45 | 282 | 3.44e-60 | 198 |
| MS.gene90371.t1 | MTR_1g040475 | 44.041 | 193 | 89 | 2 | 51 | 243 | 19 | 192 | 1.00e-42 | 150 |
| MS.gene90371.t1 | MTR_1g076220 | 37.262 | 263 | 109 | 5 | 185 | 446 | 21 | 228 | 1.27e-40 | 145 |
| MS.gene90371.t1 | MTR_1g093370 | 46.753 | 154 | 78 | 2 | 297 | 446 | 13 | 166 | 1.17e-34 | 127 |
| MS.gene90371.t1 | MTR_2g059110 | 55.000 | 80 | 36 | 0 | 42 | 121 | 8 | 87 | 2.40e-23 | 94.4 |
| MS.gene90371.t1 | MTR_2g059120 | 59.091 | 66 | 27 | 0 | 56 | 121 | 20 | 85 | 1.99e-19 | 83.6 |
| MS.gene90371.t1 | MTR_1g040455 | 41.414 | 99 | 53 | 2 | 351 | 446 | 1 | 97 | 6.51e-18 | 79.3 |
| MS.gene90371.t1 | MTR_1g055050 | 42.857 | 133 | 72 | 3 | 139 | 271 | 12 | 140 | 3.92e-17 | 81.3 |
| MS.gene90371.t1 | MTR_8g098970 | 67.308 | 52 | 17 | 0 | 241 | 292 | 1 | 52 | 1.06e-16 | 74.7 |
| MS.gene90371.t1 | MTR_2g100150 | 32.955 | 176 | 68 | 6 | 50 | 221 | 15 | 144 | 3.72e-15 | 73.6 |
| MS.gene90371.t1 | MTR_2g084565 | 22.727 | 396 | 233 | 6 | 53 | 445 | 118 | 443 | 5.11e-14 | 73.9 |
| MS.gene90371.t1 | MTR_8g098965 | 50.000 | 90 | 27 | 3 | 200 | 289 | 47 | 118 | 6.49e-14 | 68.9 |
| MS.gene90371.t1 | MTR_3g020210 | 80.556 | 36 | 7 | 0 | 265 | 300 | 51 | 86 | 1.29e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90371.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene90371.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene90371.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene90371.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
| MS.gene90371.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
| MS.gene90371.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
| MS.gene90371.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
| MS.gene90371.t1 | AT3G19640 | 44.843 | 446 | 188 | 10 | 51 | 446 | 46 | 483 | 1.83e-114 | 345 |
| MS.gene90371.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 27 | 395 | 1.20e-108 | 327 |
| MS.gene90371.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 16 | 384 | 1.50e-108 | 326 |
| MS.gene90371.t1 | AT5G09690 | 49.482 | 386 | 150 | 8 | 39 | 421 | 27 | 370 | 1.52e-104 | 316 |
| MS.gene90371.t1 | AT3G58970 | 41.805 | 421 | 190 | 9 | 41 | 446 | 54 | 434 | 1.32e-98 | 302 |
| MS.gene90371.t1 | AT5G64560 | 45.985 | 411 | 186 | 5 | 39 | 446 | 15 | 392 | 5.64e-95 | 291 |
| MS.gene90371.t1 | AT5G09690 | 49.143 | 350 | 130 | 5 | 39 | 384 | 16 | 321 | 4.17e-93 | 284 |
| MS.gene90371.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
| MS.gene90371.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
| MS.gene90371.t1 | AT5G09690 | 50.437 | 343 | 130 | 6 | 39 | 381 | 27 | 329 | 6.31e-93 | 285 |
| MS.gene90371.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 16 | 318 | 6.55e-93 | 284 |
| MS.gene90371.t1 | AT5G09690 | 49.280 | 347 | 128 | 5 | 39 | 381 | 16 | 318 | 7.00e-93 | 284 |
| MS.gene90371.t1 | AT5G64560 | 48.518 | 371 | 156 | 5 | 39 | 407 | 15 | 352 | 4.63e-91 | 281 |
| MS.gene90371.t1 | AT5G09690 | 43.066 | 411 | 174 | 8 | 39 | 446 | 16 | 369 | 1.37e-87 | 272 |
| MS.gene90371.t1 | AT5G09690 | 45.875 | 303 | 124 | 6 | 43 | 345 | 20 | 282 | 1.36e-67 | 218 |
| MS.gene90371.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene90371.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene90371.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene90371.t1 | AT4G28580 | 36.430 | 409 | 208 | 11 | 43 | 446 | 46 | 407 | 8.05e-67 | 219 |
| MS.gene90371.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
| MS.gene90371.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
| MS.gene90371.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
| MS.gene90371.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
Find 0 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTTATATTATACATTAT+AGG | + | 15082:36195-36214 | None:intergenic | 10.0% |
| !!! | TTTTATGTATAATATAATGT+AGG | - | 15082:36040-36059 | MS.gene90371:intron | 10.0% |
| !! | AATGTATAATATAACTTATG+TGG | - | 15082:36197-36216 | MS.gene90371:intron | 15.0% |
| !! | ACAAAAAATACATAGAAAAA+AGG | - | 15082:36278-36297 | MS.gene90371:intron | 15.0% |
| !! | ATATAAGTTTGATATACAAA+AGG | + | 15082:35827-35846 | None:intergenic | 15.0% |
| !! | ATTTAATTGGAACAAATTAA+AGG | - | 15082:36091-36110 | MS.gene90371:intron | 15.0% |
| !! | GTTACAATTAAATAACTTAA+AGG | - | 15082:36151-36170 | MS.gene90371:intron | 15.0% |
| !! | GTTATTTAATTGTAACAAAT+TGG | + | 15082:36147-36166 | None:intergenic | 15.0% |
| !! | TTCATTTATATAGAAAAAGA+AGG | - | 15082:36524-36543 | MS.gene90371:intron | 15.0% |
| !!! | GATGTATATTAAATTTTGTT+TGG | - | 15082:35337-35356 | MS.gene90371:CDS | 15.0% |
| !!! | TTCTTTTTCTATATAAATGA+AGG | + | 15082:36525-36544 | None:intergenic | 15.0% |
| !! | AAACTCAAGATCAAATAAAT+GGG | + | 15082:35781-35800 | None:intergenic | 20.0% |
| !! | ACTAATAACCAAAATACAAT+AGG | + | 15082:37470-37489 | None:intergenic | 20.0% |
| !! | ATTGCAATACATATTTATCA+AGG | + | 15082:34872-34891 | None:intergenic | 20.0% |
| !! | CAAGTTCATAATTAAATCAA+AGG | - | 15082:35108-35127 | MS.gene90371:CDS | 20.0% |
| !! | TACAATGTATGTATTATTAC+AGG | - | 15082:37610-37629 | MS.gene90371:CDS | 20.0% |
| !! | TCTTCATATTATTGTTCATT+TGG | - | 15082:36652-36671 | MS.gene90371:intron | 20.0% |
| !! | TGTTCCAATTAAATAACTTT+AGG | + | 15082:36085-36104 | None:intergenic | 20.0% |
| !! | TTGCAATACATATTTATCAA+GGG | + | 15082:34871-34890 | None:intergenic | 20.0% |
| !! | TTTCTATAGAATTGTTTACA+TGG | - | 15082:35223-35242 | MS.gene90371:CDS | 20.0% |
| !!! | TCTATAGAAATACAAGATTT+TGG | + | 15082:35213-35232 | None:intergenic | 20.0% |
| !!! | TTTTAACTGAAACAAGAAAA+TGG | + | 15082:37356-37375 | None:intergenic | 20.0% |
| ! | AAATACAATAGGATAACCTT+TGG | + | 15082:37459-37478 | None:intergenic | 25.0% |
| ! | AATTCGAAAGGTAAATAATC+AGG | + | 15082:35029-35048 | None:intergenic | 25.0% |
| ! | AGCAATTAACAATTTAACAG+TGG | - | 15082:36374-36393 | MS.gene90371:intron | 25.0% |
| ! | AGTTAATATAGATAACAGTG+TGG | + | 15082:37292-37311 | None:intergenic | 25.0% |
| ! | AGTTGAAAATGACAATTGAT+AGG | - | 15082:36882-36901 | MS.gene90371:intron | 25.0% |
| ! | ATTATTTACCTTTCGAATTC+AGG | - | 15082:35030-35049 | MS.gene90371:intron | 25.0% |
| ! | ATTCGAAAGGTAAATAATCA+GGG | + | 15082:35028-35047 | None:intergenic | 25.0% |
| ! | CAAACTCAAGATCAAATAAA+TGG | + | 15082:35782-35801 | None:intergenic | 25.0% |
| ! | GGTTCCTAAAGTTATTTAAT+TGG | - | 15082:36078-36097 | MS.gene90371:intron | 25.0% |
| ! | GTTAATATAGATAACAGTGT+GGG | + | 15082:37291-37310 | None:intergenic | 25.0% |
| ! | TAAAGTAAGTCAAGAATGAA+AGG | + | 15082:35166-35185 | None:intergenic | 25.0% |
| ! | TAAATAACTTAAAGGACCTA+TGG | - | 15082:36159-36178 | MS.gene90371:intron | 25.0% |
| ! | TATTATTACAGGATAATGTG+CGG | - | 15082:37621-37640 | MS.gene90371:CDS | 25.0% |
| ! | TCTATTTATCACTAACTTCT+AGG | + | 15082:36257-36276 | None:intergenic | 25.0% |
| ! | TGGTACGAAAAAAACTTAAA+GGG | - | 15082:36121-36140 | MS.gene90371:intron | 25.0% |
| ! | TTATTTACCTTTCGAATTCA+GGG | - | 15082:35031-35050 | MS.gene90371:intron | 25.0% |
| ! | TTCTCTATTCTATTTGCAAA+AGG | - | 15082:36698-36717 | MS.gene90371:intron | 25.0% |
| ! | TTGTAAAACATGTGAATATG+AGG | + | 15082:35934-35953 | None:intergenic | 25.0% |
| ! | TTTATATAGAAAAAGAAGGC+CGG | - | 15082:36528-36547 | MS.gene90371:intron | 25.0% |
| !! | AAGGTTATCCTATTGTATTT+TGG | - | 15082:37459-37478 | MS.gene90371:CDS | 25.0% |
| !! | AATCAAAGGCTATATTCTTT+TGG | - | 15082:35122-35141 | MS.gene90371:CDS | 25.0% |
| !! | ATATAACTTATGTGGTTTGT+TGG | - | 15082:36205-36224 | MS.gene90371:intron | 25.0% |
| !!! | GGGAAGTATTATCATATTTA+AGG | - | 15082:35272-35291 | MS.gene90371:CDS | 25.0% |
| AAACGGTGATAGATAAATTG+CGG | + | 15082:37333-37352 | None:intergenic | 30.0% | |
| AACAAATTAAAGGATGCAAG+TGG | - | 15082:36101-36120 | MS.gene90371:intron | 30.0% | |
| AATTTCTTTCCATCATACCA+TGG | + | 15082:36477-36496 | None:intergenic | 30.0% | |
| AGATTTCATCAACATTCAAC+TGG | - | 15082:37396-37415 | MS.gene90371:CDS | 30.0% | |
| ATACTAATCAAGCAAGCATA+TGG | + | 15082:36627-36646 | None:intergenic | 30.0% | |
| ATATACTTACCATGGTATGA+TGG | - | 15082:36465-36484 | MS.gene90371:intron | 30.0% | |
| ATTATGAACTTGTACTAACC+TGG | + | 15082:35100-35119 | None:intergenic | 30.0% | |
| CAAATCACAAATGAACTTGT+AGG | - | 15082:35296-35315 | MS.gene90371:CDS | 30.0% | |
| CAATATTAGCTCAGCAAATA+TGG | + | 15082:36910-36929 | None:intergenic | 30.0% | |
| CATATTTATCAAGGGAATTC+AGG | + | 15082:34863-34882 | None:intergenic | 30.0% | |
| CTGAAACAAGAAAATGGAAA+CGG | + | 15082:37350-37369 | None:intergenic | 30.0% | |
| CTTATAATAACAGGAGTTTG+CGG | - | 15082:37779-37798 | MS.gene90371:CDS | 30.0% | |
| GAAGATCAGTACTCTAAATT+TGG | - | 15082:36770-36789 | MS.gene90371:intron | 30.0% | |
| GTGGTACGAAAAAAACTTAA+AGG | - | 15082:36120-36139 | MS.gene90371:intron | 30.0% | |
| TAATGCAGTTACTCTAATAC+TGG | + | 15082:35384-35403 | None:intergenic | 30.0% | |
| TATAGGCTAAATTACACCAT+AGG | + | 15082:36178-36197 | None:intergenic | 30.0% | |
| TGTTTATTCTGGTGAAATGT+AGG | - | 15082:36347-36366 | MS.gene90371:intron | 30.0% | |
| TTATATAGAAAAAGAAGGCC+GGG | - | 15082:36529-36548 | MS.gene90371:intron | 30.0% | |
| TTATATCAAGGAACTCTGAT+TGG | - | 15082:35526-35545 | MS.gene90371:CDS | 30.0% | |
| TTATGAACTTGTACTAACCT+GGG | + | 15082:35099-35118 | None:intergenic | 30.0% | |
| TTCGAAAGGTAAATAATCAG+GGG | + | 15082:35027-35046 | None:intergenic | 30.0% | |
| TTTCTCATATTAGTCACCAA+AGG | - | 15082:37440-37459 | MS.gene90371:CDS | 30.0% | |
| ! | AGAAGGTGATGTTCATTTTA+TGG | - | 15082:36844-36863 | MS.gene90371:intron | 30.0% |
| ! | ATGGTATGATGGAAAGAAAT+TGG | - | 15082:36476-36495 | MS.gene90371:intron | 30.0% |
| ! | ATTTTATGGAGATCAGTCTA+TGG | - | 15082:37031-37050 | MS.gene90371:intron | 30.0% |
| ! | CACATGTTTTACAAAGCAAT+GGG | - | 15082:35940-35959 | MS.gene90371:intron | 30.0% |
| ! | GTATATTTTCTGCATTTGTG+TGG | - | 15082:37807-37826 | MS.gene90371:CDS | 30.0% |
| ! | TATTTGCTGAGCTAATATTG+TGG | - | 15082:36910-36929 | MS.gene90371:intron | 30.0% |
| ! | TCACATGTTTTACAAAGCAA+TGG | - | 15082:35939-35958 | MS.gene90371:intron | 30.0% |
| !! | CTCTAGAATGGTTTCTTTAT+AGG | - | 15082:35890-35909 | MS.gene90371:intron | 30.0% |
| !! | CTTACTTTAGAACAGAGAAA+TGG | - | 15082:35177-35196 | MS.gene90371:CDS | 30.0% |
| !! | TCATCTACTTTTCTTGTCAT+TGG | - | 15082:35853-35872 | MS.gene90371:intron | 30.0% |
| !! | TCTACTTGCTATGTTTATTC+TGG | - | 15082:36336-36355 | MS.gene90371:intron | 30.0% |
| !!! | CGAATGGAATTGTCATTTTA+TGG | - | 15082:37017-37036 | MS.gene90371:intron | 30.0% |
| AAACATGTGAATATGAGGTG+TGG | + | 15082:35929-35948 | None:intergenic | 35.0% | |
| AATAAATGGGTAACTGCACT+TGG | + | 15082:35768-35787 | None:intergenic | 35.0% | |
| ACATTTGTGGTTGCAATCTT+TGG | - | 15082:37683-37702 | MS.gene90371:CDS | 35.0% | |
| AGATGAAATAGAGCAGCTTA+TGG | - | 15082:36947-36966 | MS.gene90371:intron | 35.0% | |
| AGTACTAGTTGTGAATCTTG+TGG | + | 15082:35989-36008 | None:intergenic | 35.0% | |
| ATAAATGGGTAACTGCACTT+GGG | + | 15082:35767-35786 | None:intergenic | 35.0% | |
| ATGTGATTGATCTTCAACGA+CGG | - | 15082:34892-34911 | MS.gene90371:intron | 35.0% | |
| CATACAGACAACGCATAATT+GGG | - | 15082:37533-37552 | MS.gene90371:CDS | 35.0% | |
| CGCAAACTCCTGTTATTATA+AGG | + | 15082:37781-37800 | None:intergenic | 35.0% | |
| GAGACAAGCACTTTATATCA+AGG | - | 15082:35514-35533 | MS.gene90371:intron | 35.0% | |
| GCAACAGAATATTCTAGACT+CGG | + | 15082:35672-35691 | None:intergenic | 35.0% | |
| GGTGACTAATATGAGAAAGA+AGG | + | 15082:37438-37457 | None:intergenic | 35.0% | |
| GTGTATTATTACAGCAGATG+AGG | - | 15082:34830-34849 | MS.gene90371:intron | 35.0% | |
| TAGATAAATTGCGGTGAAGT+TGG | + | 15082:37324-37343 | None:intergenic | 35.0% | |
| TCATACAGACAACGCATAAT+TGG | - | 15082:37532-37551 | MS.gene90371:CDS | 35.0% | |
| TGAGTTTCTGCATGCAATAT+GGG | - | 15082:35252-35271 | MS.gene90371:CDS | 35.0% | |
| TGGAGGATATATACTTACCA+TGG | - | 15082:36457-36476 | MS.gene90371:intron | 35.0% | |
| TGGTAAGTATATATCCTCCA+TGG | + | 15082:36457-36476 | None:intergenic | 35.0% | |
| TGTAGGCTAAATTACACTAG+AGG | - | 15082:36057-36076 | MS.gene90371:intron | 35.0% | |
| TTAGAGAAAGCCAGTATGTA+TGG | - | 15082:35698-35717 | MS.gene90371:intron | 35.0% | |
| TTGAGTTTCTGCATGCAATA+TGG | - | 15082:35251-35270 | MS.gene90371:CDS | 35.0% | |
| TTGTAAATCTCGAGCAGATA+CGG | - | 15082:34808-34827 | MS.gene90371:intron | 35.0% | |
| TTGTGAGTAAAAGCTCAAAC+TGG | + | 15082:37658-37677 | None:intergenic | 35.0% | |
| ! | CACTCTAAACAAGTTGACAT+CGG | - | 15082:37259-37278 | MS.gene90371:intron | 35.0% |
| ! | GAGTCTAGAATATTCTGTTG+CGG | - | 15082:35671-35690 | MS.gene90371:intron | 35.0% |
| ! | TCTTTTTGTGCCATACATAC+TGG | + | 15082:35711-35730 | None:intergenic | 35.0% |
| ! | TGTTGGTGGAAAAATTCACT+AGG | - | 15082:36222-36241 | MS.gene90371:intron | 35.0% |
| ! | TTCCATTCGTCTTTTCTTCT+CGG | + | 15082:37006-37025 | None:intergenic | 35.0% |
| !! | TAACTTATGTGGTTTGTTGG+TGG | - | 15082:36208-36227 | MS.gene90371:intron | 35.0% |
| !! | TATGGATGATGATGGTGATA+TGG | - | 15082:36965-36984 | MS.gene90371:intron | 35.0% |
| !! | TCTACTTTTCTTGTCATTGG+TGG | - | 15082:35856-35875 | MS.gene90371:intron | 35.0% |
| AACAATCCTTGGTAGGGAAA+AGG | - | 15082:34779-34798 | MS.gene90371:intron | 40.0% | |
| AATTCCTATTGCCTCTCCTT+TGG | + | 15082:34980-34999 | None:intergenic | 40.0% | |
| ACCATTCTGACATGAACCAA+AGG | - | 15082:34961-34980 | MS.gene90371:CDS | 40.0% | |
| ACCCTCTCTTACGTTAAAAG+CGG | + | 15082:34547-34566 | None:intergenic | 40.0% | |
| ACTCACAACTGCAACATTTG+TGG | - | 15082:37670-37689 | MS.gene90371:CDS | 40.0% | |
| AGACAAACACAGGATCAAGT+AGG | + | 15082:34752-34771 | None:intergenic | 40.0% | |
| AGTTTCCAGATGTGTCAACA+CGG | + | 15082:34662-34681 | None:intergenic | 40.0% | |
| CAGTGGGTCCTTATAATAAC+AGG | - | 15082:37770-37789 | MS.gene90371:CDS | 40.0% | |
| GCAGATGGGACATCAAATAA+TGG | + | 15082:37746-37765 | None:intergenic | 40.0% | |
| GCAGTCTGTAACTGTCTAAA+AGG | + | 15082:35477-35496 | None:intergenic | 40.0% | |
| GCATTCTGTTACCACAAAAG+AGG | + | 15082:35650-35669 | None:intergenic | 40.0% | |
| GCTAATATTGTGGATGTGTC+AGG | - | 15082:36920-36939 | MS.gene90371:intron | 40.0% | |
| GTCTATGGTTGGATATAGAC+CGG | - | 15082:37046-37065 | MS.gene90371:intron | 40.0% | |
| GTTACCACAAAAGAGGTTTC+TGG | + | 15082:35643-35662 | None:intergenic | 40.0% | |
| GTTGTCTGTATGAGTATGTG+TGG | + | 15082:37525-37544 | None:intergenic | 40.0% | |
| TAAATGGGTAACTGCACTTG+GGG | + | 15082:35766-35785 | None:intergenic | 40.0% | |
| TACAGACTGCTTTCTGTTCA+CGG | - | 15082:35487-35506 | MS.gene90371:intron | 40.0% | |
| TACCGAGAAGAAAAGACGAA+TGG | - | 15082:37001-37020 | MS.gene90371:intron | 40.0% | |
| TATGGAGATCAGTCTATGGT+TGG | - | 15082:37035-37054 | MS.gene90371:intron | 40.0% | |
| TCTCTGGCATCAAATCAACT+TGG | + | 15082:36428-36447 | None:intergenic | 40.0% | |
| TGTGGTTCTTCAAGTACAGA+AGG | - | 15082:37825-37844 | MS.gene90371:CDS | 40.0% | |
| TTGAAATCATCCCAAGCAAC+AGG | + | 15082:36020-36039 | None:intergenic | 40.0% | |
| TTTCACAGGATTTCTTGTCC+CGG | + | 15082:36550-36569 | None:intergenic | 40.0% | |
| ! | ATAGCCAGAAACCTCTTTTG+TGG | - | 15082:35636-35655 | MS.gene90371:intron | 40.0% |
| ! | GCACATCAACACATTTTCAC+AGG | + | 15082:36564-36583 | None:intergenic | 40.0% |
| ! | TCCTTTGGTTCATGTCAGAA+TGG | + | 15082:34965-34984 | None:intergenic | 40.0% |
| ! | TTAAAAGCGGATGCAGGTTT+TGG | + | 15082:34534-34553 | None:intergenic | 40.0% |
| ! | TTCGTCTTTTCTTCTCGGTA+AGG | + | 15082:37001-37020 | None:intergenic | 40.0% |
| !! | ATCCGCTTTTAACGTAAGAG+AGG | - | 15082:34542-34561 | MS.gene90371:CDS | 40.0% |
| !! | TCCGCTTTTAACGTAAGAGA+GGG | - | 15082:34543-34562 | MS.gene90371:CDS | 40.0% |
| AAATTCCGTGAGAGATGCAC+AGG | + | 15082:36317-36336 | None:intergenic | 45.0% | |
| AATTGAGGCTTATCCGTTGC+TGG | - | 15082:36734-36753 | MS.gene90371:intron | 45.0% | |
| ACAGACAACGCATAATTGGG+AGG | - | 15082:37536-37555 | MS.gene90371:CDS | 45.0% | |
| ACCCATCAACAATCCTTGGT+AGG | - | 15082:34772-34791 | MS.gene90371:intron | 45.0% | |
| ACTATTCTGTGCCTGTTGCT+TGG | - | 15082:36006-36025 | MS.gene90371:intron | 45.0% | |
| AGACAACGCATAATTGGGAG+GGG | - | 15082:37538-37557 | MS.gene90371:CDS | 45.0% | |
| ATCAAGTAGGCGAAGATCAC+GGG | + | 15082:34739-34758 | None:intergenic | 45.0% | |
| ATGCACATTTCTTGACACCC+AGG | - | 15082:35079-35098 | MS.gene90371:intron | 45.0% | |
| ATGTCCCATCTGCATTTCAG+TGG | - | 15082:37753-37772 | MS.gene90371:CDS | 45.0% | |
| CAGACAACGCATAATTGGGA+GGG | - | 15082:37537-37556 | MS.gene90371:CDS | 45.0% | |
| CCCATCAACAATCCTTGGTA+GGG | - | 15082:34773-34792 | MS.gene90371:intron | 45.0% | |
| CCCTACCAAGGATTGTTGAT+GGG | + | 15082:34776-34795 | None:intergenic | 45.0% | |
| CTTACGTTAAAAGCGGATGC+AGG | + | 15082:34540-34559 | None:intergenic | 45.0% | |
| CTTCTGAACTCTCCTAGTCA+GGG | + | 15082:36829-36848 | None:intergenic | 45.0% | |
| GAGCAGCTTATGGATGATGA+TGG | - | 15082:36957-36976 | MS.gene90371:intron | 45.0% | |
| GAGTGGTGGCAGGAATATTT+GGG | - | 15082:37705-37724 | MS.gene90371:CDS | 45.0% | |
| GATCAAGTAGGCGAAGATCA+CGG | + | 15082:34740-34759 | None:intergenic | 45.0% | |
| GGCAGCAGAGTTAGAAATTG+AGG | - | 15082:36719-36738 | MS.gene90371:intron | 45.0% | |
| GTCTACCCATCAACAATCCT+TGG | - | 15082:34768-34787 | MS.gene90371:intron | 45.0% | |
| GTTGGATATAGACCGGTTGA+TGG | - | 15082:37053-37072 | MS.gene90371:intron | 45.0% | |
| TCAAGAGCCCTGAATTCGAA+AGG | + | 15082:35041-35060 | None:intergenic | 45.0% | |
| TCCCTACCAAGGATTGTTGA+TGG | + | 15082:34777-34796 | None:intergenic | 45.0% | |
| TCTGACATGAACCAAAGGAG+AGG | - | 15082:34966-34985 | MS.gene90371:CDS | 45.0% | |
| TGAACCAAAGGAGAGGCAAT+AGG | - | 15082:34973-34992 | MS.gene90371:CDS | 45.0% | |
| TGACACATCTGGAAACTCTC+AGG | - | 15082:34665-34684 | MS.gene90371:CDS | 45.0% | |
| TGGAAACTCTCAGGTCATTG+AGG | - | 15082:34674-34693 | MS.gene90371:CDS | 45.0% | |
| TGTCCCATCTGCATTTCAGT+GGG | - | 15082:37754-37773 | MS.gene90371:CDS | 45.0% | |
| TTGAAAAGCTTGCCTTCCAG+AGG | + | 15082:34586-34605 | None:intergenic | 45.0% | |
| ! | AGAAGAGCTTGAGCATTGCT+AGG | - | 15082:37141-37160 | MS.gene90371:intron | 45.0% |
| ! | CAATAGCCTTTTCCCTACCA+AGG | + | 15082:34788-34807 | None:intergenic | 45.0% |
| ! | CTAATACTGGCCTCAATCAG+TGG | + | 15082:35371-35390 | None:intergenic | 45.0% |
| ! | CTATTCTGTGCCTGTTGCTT+GGG | - | 15082:36007-36026 | MS.gene90371:intron | 45.0% |
| ! | GGATCCACGATTTAAGACCT+TGG | + | 15082:34641-34660 | None:intergenic | 45.0% |
| ! | GTTGATGGGTAGACAAACAC+AGG | + | 15082:34762-34781 | None:intergenic | 45.0% |
| ! | TCTGGAAGGCAAGCTTTTCA+AGG | - | 15082:34585-34604 | MS.gene90371:CDS | 45.0% |
| ! | TGTGGTTGCAATCTTTGGAG+TGG | - | 15082:37688-37707 | MS.gene90371:CDS | 45.0% |
| !! | AAGGCAAGCTTTTCAAGGAG+TGG | - | 15082:34590-34609 | MS.gene90371:CDS | 45.0% |
| !! | ACCATTCTAGAGTGCGAAAC+AGG | + | 15082:35882-35901 | None:intergenic | 45.0% |
| !! | AGAGGGTATCAATCGACCAA+CGG | - | 15082:34560-34579 | MS.gene90371:CDS | 45.0% |
| AAATGTGCATGCAGCCTCCA+GGG | + | 15082:35069-35088 | None:intergenic | 50.0% | |
| AACGACGGTTGACAACAGCT+GGG | - | 15082:34907-34926 | MS.gene90371:intron | 50.0% | |
| AACGAGAACCGAGAAGAGCT+AGG | + | 15082:35593-35612 | None:intergenic | 50.0% | |
| ACGAGAACCGAGAAGAGCTA+GGG | + | 15082:35592-35611 | None:intergenic | 50.0% | |
| ACTGCTTTCTGTTCACGGTC+AGG | - | 15082:35492-35511 | MS.gene90371:intron | 50.0% | |
| AGGACCCACTGAAATGCAGA+TGG | + | 15082:37761-37780 | None:intergenic | 50.0% | |
| AGGAGAGACTGGAAGAGAGA+TGG | + | 15082:37084-37103 | None:intergenic | 50.0% | |
| CCTGACTAGGAGAGTTCAGA+AGG | - | 15082:36827-36846 | MS.gene90371:intron | 50.0% | |
| CCTTCTGAACTCTCCTAGTC+AGG | + | 15082:36830-36849 | None:intergenic | 50.0% | |
| CGAGAAGAGCTAGGGAGAAA+GGG | + | 15082:35584-35603 | None:intergenic | 50.0% | |
| GACAACGCATAATTGGGAGG+GGG | - | 15082:37539-37558 | MS.gene90371:CDS | 50.0% | |
| GAGATGGATGCACCATCAAC+CGG | + | 15082:37068-37087 | None:intergenic | 50.0% | |
| GAGGCCAAGGTCTTAAATCG+TGG | - | 15082:34634-34653 | MS.gene90371:CDS | 50.0% | |
| GATGTCAGTCCATCCAGCAA+CGG | + | 15082:36750-36769 | None:intergenic | 50.0% | |
| GGACCCACTGAAATGCAGAT+GGG | + | 15082:37760-37779 | None:intergenic | 50.0% | |
| GGAGTGGTGGCAGGAATATT+TGG | - | 15082:37704-37723 | MS.gene90371:CDS | 50.0% | |
| GGTGATGAAACAGGAGAGAC+TGG | + | 15082:37095-37114 | None:intergenic | 50.0% | |
| GTGAACCTGTGCATCTCTCA+CGG | - | 15082:36309-36328 | MS.gene90371:intron | 50.0% | |
| ! | CCTTTCTCCCTAGCTCTTCT+CGG | - | 15082:35582-35601 | MS.gene90371:CDS | 50.0% |
| ! | GAGTCAGGTGGTGATGAAAC+AGG | + | 15082:37104-37123 | None:intergenic | 50.0% |
| ! | GCCTGTTTCGCACTCTAGAA+TGG | - | 15082:35878-35897 | MS.gene90371:intron | 50.0% |
| ! | GGATCTGTGTCCACTGATTG+AGG | - | 15082:35358-35377 | MS.gene90371:CDS | 50.0% |
| ! | TGGATCCGTGTTGACACATC+TGG | - | 15082:34654-34673 | MS.gene90371:CDS | 50.0% |
| !! | AAAGCGGATGCAGGTTTTGG+TGG | + | 15082:34531-34550 | None:intergenic | 50.0% |
| !! | AAGCGGATGCAGGTTTTGGT+GGG | + | 15082:34530-34549 | None:intergenic | 50.0% |
| !! | GGTTGCAATCTTTGGAGTGG+TGG | - | 15082:37691-37710 | MS.gene90371:CDS | 50.0% |
| !! | GTAGACTTGTTGCCCTGACT+AGG | - | 15082:36814-36833 | MS.gene90371:intron | 50.0% |
| AACGCATAATTGGGAGGGGG+AGG | - | 15082:37542-37561 | MS.gene90371:CDS | 55.0% | |
| ACGACGGTTGACAACAGCTG+GGG | - | 15082:34908-34927 | MS.gene90371:intron | 55.0% | |
| ACGCATAATTGGGAGGGGGA+GGG | - | 15082:37543-37562 | MS.gene90371:CDS | 55.0% | |
| ATCAATCGACCAACGGCCTC+TGG | - | 15082:34567-34586 | MS.gene90371:CDS | 55.0% | |
| CAACGACGGTTGACAACAGC+TGG | - | 15082:34906-34925 | MS.gene90371:intron | 55.0% | |
| CACCACCTGACTCTCACTCT+CGG | - | 15082:37111-37130 | MS.gene90371:intron | 55.0% | |
| CCGAGAAGAGCTAGGGAGAA+AGG | + | 15082:35585-35604 | None:intergenic | 55.0% | |
| GAAATGTGCATGCAGCCTCC+AGG | + | 15082:35070-35089 | None:intergenic | 55.0% | |
| GAGGCTTATCCGTTGCTGGA+TGG | - | 15082:36738-36757 | MS.gene90371:intron | 55.0% | |
| GATGCCAGAGACATCGACCA+TGG | - | 15082:36437-36456 | MS.gene90371:intron | 55.0% | |
| GGGTAACTGCACTTGGGGAT+GGG | + | 15082:35761-35780 | None:intergenic | 55.0% | |
| GTTGTCGAGGTCAAGAAGCG+AGG | - | 15082:34615-34634 | MS.gene90371:CDS | 55.0% | |
| TCAAGGAGTGGACGTTGTCG+AGG | - | 15082:34602-34621 | MS.gene90371:CDS | 55.0% | |
| TCCTCCATGGTCGATGTCTC+TGG | + | 15082:36444-36463 | None:intergenic | 55.0% | |
| TGGGTAACTGCACTTGGGGA+TGG | + | 15082:35762-35781 | None:intergenic | 55.0% | |
| !! | GCAATCTTTGGAGTGGTGGC+AGG | - | 15082:37695-37714 | MS.gene90371:CDS | 55.0% |
| ACGGTTGACAACAGCTGGGG+TGG | - | 15082:34911-34930 | MS.gene90371:intron | 60.0% | |
| AGCCTCCGAGAGTGAGAGTC+AGG | + | 15082:37119-37138 | None:intergenic | 60.0% | |
| AGTAGGCGAAGATCACGGGC+AGG | + | 15082:34735-34754 | None:intergenic | 60.0% | |
| ATCGACCAACGGCCTCTGGA+AGG | - | 15082:34571-34590 | MS.gene90371:CDS | 60.0% | |
| CACCTGACTCTCACTCTCGG+AGG | - | 15082:37114-37133 | MS.gene90371:intron | 60.0% | |
| CACGGGCAGGAAGATCGCAA+CGG | + | 15082:34722-34741 | None:intergenic | 60.0% | |
| CAGGGCTCTTGAAGTTGCCC+TGG | - | 15082:35049-35068 | MS.gene90371:intron | 60.0% | |
| CGGTTGACAACAGCTGGGGT+GGG | - | 15082:34912-34931 | MS.gene90371:intron | 60.0% | |
| CTCCGAGAGTGAGAGTCAGG+TGG | + | 15082:37116-37135 | None:intergenic | 60.0% | |
| GAGGTCAAGAAGCGAGGCCA+AGG | - | 15082:34621-34640 | MS.gene90371:CDS | 60.0% | |
| GCCAGAGACATCGACCATGG+AGG | - | 15082:36440-36459 | MS.gene90371:intron | 60.0% | |
| GGCTCTTGAAGTTGCCCTGG+AGG | - | 15082:35052-35071 | MS.gene90371:intron | 60.0% | |
| ! | GGAGTCGACACGAGAGCATG+AGG | - | 15082:37162-37181 | MS.gene90371:intron | 60.0% |
| GCTTGCCTTCCAGAGGCCGT+TGG | + | 15082:34579-34598 | None:intergenic | 65.0% | |
| AACAGCTGGGGTGGGCGAGG+TGG | - | 15082:34920-34939 | MS.gene90371:intron | 70.0% | |
| ACAGCTGGGGTGGGCGAGGT+GGG | - | 15082:34921-34940 | MS.gene90371:intron | 70.0% | |
| GACAACAGCTGGGGTGGGCG+AGG | - | 15082:34917-34936 | MS.gene90371:intron | 70.0% | |
| TGGGCGAGGTGGGCGAGGTC+TGG | - | 15082:34931-34950 | MS.gene90371:intron | 75.0% | |
| ! | TGGGGTGGGCGAGGTGGGCG+AGG | - | 15082:34926-34945 | MS.gene90371:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15082 | gene | 34501 | 37862 | 34501 | ID=MS.gene90371 |
| 15082 | mRNA | 34501 | 37862 | 34501 | ID=MS.gene90371.t1;Parent=MS.gene90371 |
| 15082 | exon | 37263 | 37862 | 37263 | ID=MS.gene90371.t1.exon1;Parent=MS.gene90371.t1 |
| 15082 | CDS | 37263 | 37862 | 37263 | ID=cds.MS.gene90371.t1;Parent=MS.gene90371.t1 |
| 15082 | exon | 35515 | 35643 | 35515 | ID=MS.gene90371.t1.exon2;Parent=MS.gene90371.t1 |
| 15082 | CDS | 35515 | 35643 | 35515 | ID=cds.MS.gene90371.t1;Parent=MS.gene90371.t1 |
| 15082 | exon | 35083 | 35421 | 35083 | ID=MS.gene90371.t1.exon3;Parent=MS.gene90371.t1 |
| 15082 | CDS | 35083 | 35421 | 35083 | ID=cds.MS.gene90371.t1;Parent=MS.gene90371.t1 |
| 15082 | exon | 34946 | 34993 | 34946 | ID=MS.gene90371.t1.exon4;Parent=MS.gene90371.t1 |
| 15082 | CDS | 34946 | 34993 | 34946 | ID=cds.MS.gene90371.t1;Parent=MS.gene90371.t1 |
| 15082 | exon | 34501 | 34731 | 34501 | ID=MS.gene90371.t1.exon5;Parent=MS.gene90371.t1 |
| 15082 | CDS | 34501 | 34731 | 34501 | ID=cds.MS.gene90371.t1;Parent=MS.gene90371.t1 |
| Gene Sequence |
| Protein sequence |
