Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067486.t1 | XP_013465620.1 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 9.90E-246 | 859 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067486.t1 | Q9S9N4 | 82.6 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 5.4e-200 | 698.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067486.t1 | G7ZYX9 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 7.1e-246 | 859.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene054723 | MS.gene067486 | PPI |
MS.gene067486 | MS.gene063967 | PPI |
MS.gene063969 | MS.gene067486 | PPI |
MS.gene98061 | MS.gene067486 | PPI |
MS.gene067486 | MS.gene046935 | PPI |
MS.gene40181 | MS.gene067486 | PPI |
MS.gene40853 | MS.gene067486 | PPI |
MS.gene92350 | MS.gene067486 | PPI |
MS.gene024949 | MS.gene067486 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067486.t1 | MTR_2g105270 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
MS.gene067486.t1 | MTR_2g105270 | 99.731 | 372 | 1 | 0 | 1 | 372 | 1 | 372 | 0.0 | 754 |
MS.gene067486.t1 | MTR_2g105270 | 99.440 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 0.0 | 724 |
MS.gene067486.t1 | MTR_5g045590 | 52.941 | 425 | 152 | 5 | 31 | 447 | 20 | 404 | 8.47e-143 | 414 |
MS.gene067486.t1 | MTR_5g005240 | 46.018 | 452 | 199 | 9 | 24 | 446 | 8 | 443 | 1.38e-115 | 346 |
MS.gene067486.t1 | MTR_1g076210 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
MS.gene067486.t1 | MTR_1g093280 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
MS.gene067486.t1 | MTR_1g040495 | 43.846 | 390 | 171 | 7 | 51 | 437 | 15 | 359 | 1.28e-98 | 300 |
MS.gene067486.t1 | MTR_1g106065 | 41.135 | 423 | 216 | 9 | 41 | 445 | 11 | 418 | 2.67e-94 | 291 |
MS.gene067486.t1 | MTR_8g088670 | 42.647 | 408 | 193 | 9 | 43 | 446 | 50 | 420 | 2.57e-93 | 288 |
MS.gene067486.t1 | MTR_8g094880 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
MS.gene067486.t1 | MTR_8g094905 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
MS.gene067486.t1 | MTR_7g096170 | 45.771 | 402 | 173 | 7 | 43 | 438 | 17 | 379 | 3.74e-91 | 281 |
MS.gene067486.t1 | MTR_7g096170 | 46.114 | 386 | 164 | 6 | 43 | 423 | 17 | 363 | 1.34e-87 | 272 |
MS.gene067486.t1 | MTR_7g096170 | 45.946 | 333 | 137 | 5 | 43 | 371 | 17 | 310 | 5.70e-70 | 224 |
MS.gene067486.t1 | MTR_8g088670 | 42.089 | 316 | 148 | 6 | 43 | 357 | 50 | 331 | 1.01e-64 | 212 |
MS.gene067486.t1 | MTR_8g088670 | 41.250 | 320 | 153 | 6 | 43 | 361 | 50 | 335 | 1.11e-64 | 212 |
MS.gene067486.t1 | MTR_7g096170 | 49.237 | 262 | 107 | 5 | 179 | 438 | 45 | 282 | 3.44e-60 | 198 |
MS.gene067486.t1 | MTR_1g040475 | 44.041 | 193 | 89 | 2 | 51 | 243 | 19 | 192 | 1.00e-42 | 150 |
MS.gene067486.t1 | MTR_1g076220 | 37.262 | 263 | 109 | 5 | 185 | 446 | 21 | 228 | 1.27e-40 | 145 |
MS.gene067486.t1 | MTR_1g093370 | 46.753 | 154 | 78 | 2 | 297 | 446 | 13 | 166 | 1.17e-34 | 127 |
MS.gene067486.t1 | MTR_2g059110 | 55.000 | 80 | 36 | 0 | 42 | 121 | 8 | 87 | 2.40e-23 | 94.4 |
MS.gene067486.t1 | MTR_2g059120 | 59.091 | 66 | 27 | 0 | 56 | 121 | 20 | 85 | 1.99e-19 | 83.6 |
MS.gene067486.t1 | MTR_1g040455 | 41.414 | 99 | 53 | 2 | 351 | 446 | 1 | 97 | 6.51e-18 | 79.3 |
MS.gene067486.t1 | MTR_1g055050 | 42.857 | 133 | 72 | 3 | 139 | 271 | 12 | 140 | 3.92e-17 | 81.3 |
MS.gene067486.t1 | MTR_8g098970 | 67.308 | 52 | 17 | 0 | 241 | 292 | 1 | 52 | 1.06e-16 | 74.7 |
MS.gene067486.t1 | MTR_2g100150 | 32.955 | 176 | 68 | 6 | 50 | 221 | 15 | 144 | 3.72e-15 | 73.6 |
MS.gene067486.t1 | MTR_2g084565 | 22.727 | 396 | 233 | 6 | 53 | 445 | 118 | 443 | 5.11e-14 | 73.9 |
MS.gene067486.t1 | MTR_8g098965 | 50.000 | 90 | 27 | 3 | 200 | 289 | 47 | 118 | 6.49e-14 | 68.9 |
MS.gene067486.t1 | MTR_3g020210 | 80.556 | 36 | 7 | 0 | 265 | 300 | 51 | 86 | 1.29e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067486.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene067486.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene067486.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene067486.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
MS.gene067486.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
MS.gene067486.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
MS.gene067486.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
MS.gene067486.t1 | AT3G19640 | 44.843 | 446 | 188 | 10 | 51 | 446 | 46 | 483 | 1.83e-114 | 345 |
MS.gene067486.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 27 | 395 | 1.20e-108 | 327 |
MS.gene067486.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 16 | 384 | 1.50e-108 | 326 |
MS.gene067486.t1 | AT5G09690 | 49.482 | 386 | 150 | 8 | 39 | 421 | 27 | 370 | 1.52e-104 | 316 |
MS.gene067486.t1 | AT3G58970 | 41.805 | 421 | 190 | 9 | 41 | 446 | 54 | 434 | 1.32e-98 | 302 |
MS.gene067486.t1 | AT5G64560 | 45.985 | 411 | 186 | 5 | 39 | 446 | 15 | 392 | 5.64e-95 | 291 |
MS.gene067486.t1 | AT5G09690 | 49.143 | 350 | 130 | 5 | 39 | 384 | 16 | 321 | 4.17e-93 | 284 |
MS.gene067486.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
MS.gene067486.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
MS.gene067486.t1 | AT5G09690 | 50.437 | 343 | 130 | 6 | 39 | 381 | 27 | 329 | 6.31e-93 | 285 |
MS.gene067486.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 16 | 318 | 6.55e-93 | 284 |
MS.gene067486.t1 | AT5G09690 | 49.280 | 347 | 128 | 5 | 39 | 381 | 16 | 318 | 7.00e-93 | 284 |
MS.gene067486.t1 | AT5G64560 | 48.518 | 371 | 156 | 5 | 39 | 407 | 15 | 352 | 4.63e-91 | 281 |
MS.gene067486.t1 | AT5G09690 | 43.066 | 411 | 174 | 8 | 39 | 446 | 16 | 369 | 1.37e-87 | 272 |
MS.gene067486.t1 | AT5G09690 | 45.875 | 303 | 124 | 6 | 43 | 345 | 20 | 282 | 1.36e-67 | 218 |
MS.gene067486.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene067486.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene067486.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene067486.t1 | AT4G28580 | 36.430 | 409 | 208 | 11 | 43 | 446 | 46 | 407 | 8.05e-67 | 219 |
MS.gene067486.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
MS.gene067486.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
MS.gene067486.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
MS.gene067486.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
Find 109 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGTGGTGGCAGGAATATT+TGG | 0.196891 | 2.4:+428008 | MS.gene067486:CDS |
ATTATTTACCTTTCGAATTC+AGG | 0.197360 | 2.4:+425334 | MS.gene067486:CDS |
GAAGATCAGTACTCTAAATT+TGG | 0.251205 | 2.4:+427074 | MS.gene067486:CDS |
CATATTTATCAAGGGAATTC+AGG | 0.256762 | 2.4:-425164 | None:intergenic |
ACATTTGTGGTTGCAATCTT+TGG | 0.293975 | 2.4:+427987 | MS.gene067486:CDS |
CGCAAACTCCTGTTATTATA+AGG | 0.306482 | 2.4:-428082 | None:intergenic |
CAGTGGGTCCTTATAATAAC+AGG | 0.314280 | 2.4:+428074 | MS.gene067486:CDS |
GAGTGGTGGCAGGAATATTT+GGG | 0.321680 | 2.4:+428009 | MS.gene067486:CDS |
TTAAAAGCCGATGCAGGTTT+TGG | 0.323916 | 2.4:-424835 | None:intergenic |
TGTTGGTGTAGCTTCTTATA+GGG | 0.330077 | 2.4:-428159 | None:intergenic |
AATTCCTATTGCCTCTCCTT+TGG | 0.347908 | 2.4:-425281 | None:intergenic |
AATTCGAAAGGTAAATAATC+AGG | 0.361564 | 2.4:-425330 | None:intergenic |
ATCAATCGACCAACGGCCTC+TGG | 0.379573 | 2.4:+424871 | MS.gene067486:CDS |
AATTGAGGCTTATCCGTTGC+TGG | 0.393934 | 2.4:+427038 | MS.gene067486:CDS |
TGGGCGAGGTAGGCGAGGTC+TGG | 0.394330 | 2.4:+425235 | MS.gene067486:CDS |
GCAGATGGGACATCAAATAA+TGG | 0.395904 | 2.4:-428047 | None:intergenic |
CCTTCTGAACTCTCCTAGTC+AGG | 0.408120 | 2.4:-427131 | None:intergenic |
TTATTTACCTTTCGAATTCA+GGG | 0.417761 | 2.4:+425335 | MS.gene067486:CDS |
GGCAGCAGAGTTAGAAATTG+AGG | 0.418070 | 2.4:+427023 | MS.gene067486:intron |
TATGGATGATGATGGTGATA+TGG | 0.419241 | 2.4:+427269 | MS.gene067486:CDS |
TCCCTACCAAGGATTGTTGA+TGG | 0.421053 | 2.4:-425078 | None:intergenic |
AGATGAAATAGAGCAGCTTA+TGG | 0.421927 | 2.4:+427251 | MS.gene067486:CDS |
TCCTTTGGTTCATGTCAGAA+TGG | 0.426763 | 2.4:-425266 | None:intergenic |
CAACGACGGTTGACAACAGC+TGG | 0.431418 | 2.4:+425210 | MS.gene067486:CDS |
TGGATCCGTGTTGACACATC+TGG | 0.446625 | 2.4:+424958 | MS.gene067486:CDS |
AGCCTCCGAGAGTGAGAGTC+AGG | 0.448161 | 2.4:-427420 | None:intergenic |
GACAACAGCTGGGGTGGGCG+AGG | 0.452519 | 2.4:+425221 | MS.gene067486:CDS |
AGATTTCATCAACATTCAAC+TGG | 0.455223 | 2.4:+427700 | MS.gene067486:CDS |
GCTCACAACTGCAACATTTG+TGG | 0.456032 | 2.4:+427974 | MS.gene067486:CDS |
GAGTCAGGTGGTGATGAAAC+AGG | 0.460932 | 2.4:-427405 | None:intergenic |
GCAATCTTTGGAGTGGTGGC+AGG | 0.465654 | 2.4:+427999 | MS.gene067486:CDS |
ATCAAGTAGGCGAAGATCAC+GGG | 0.467040 | 2.4:-425040 | None:intergenic |
TTGTGAGCAAAAGCTCAAAC+TGG | 0.470688 | 2.4:-427959 | None:intergenic |
TGAACCAAAGGAGAGGCAAT+AGG | 0.472243 | 2.4:+425277 | MS.gene067486:CDS |
GTCTACCCATCAACAATCCT+TGG | 0.472976 | 2.4:+425072 | MS.gene067486:CDS |
ATTGCAATACATATTTATCA+AGG | 0.473828 | 2.4:-425173 | None:intergenic |
ACAGCTGGGGTGGGCGAGGT+AGG | 0.474531 | 2.4:+425225 | MS.gene067486:CDS |
CAGGGCTCTTGAAGTTGCCC+TGG | 0.477339 | 2.4:+425353 | MS.gene067486:CDS |
AACAATCCTTGGTAGGGAAA+AGG | 0.485245 | 2.4:+425083 | MS.gene067486:CDS |
CTTACGTTAAAAGCCGATGC+AGG | 0.496781 | 2.4:-424841 | None:intergenic |
TTGTAAATCTCGAGCAGATA+CGG | 0.500267 | 2.4:+425112 | MS.gene067486:CDS |
GAAATGTGCATGCAGCCTCC+AGG | 0.500840 | 2.4:-425371 | None:intergenic |
TATGGAGATCAGTCTATGGT+TGG | 0.502971 | 2.4:+427339 | MS.gene067486:CDS |
GGTGATGAAACAGGAGAGAC+TGG | 0.503084 | 2.4:-427396 | None:intergenic |
GAGATGGATGCACCATCAAC+CGG | 0.513341 | 2.4:-427369 | None:intergenic |
AGAAGAGCTTGAGCATTGCT+AGG | 0.517888 | 2.4:+427445 | MS.gene067486:CDS |
CTCCATAATGGCGGATCTCA+AGG | 0.518229 | 2.4:+424798 | None:intergenic |
GGCTCTTGAAGTTGCCCTGG+AGG | 0.521464 | 2.4:+425356 | MS.gene067486:CDS |
CCCTACCAAGGATTGTTGAT+GGG | 0.521728 | 2.4:-425077 | None:intergenic |
ATGTCCCATCTGCATTTCAG+TGG | 0.522155 | 2.4:+428057 | MS.gene067486:CDS |
ACGGTTGACAACAGCTGGGG+TGG | 0.531980 | 2.4:+425215 | MS.gene067486:CDS |
ATTCGAAAGGTAAATAATCA+GGG | 0.532696 | 2.4:-425329 | None:intergenic |
GTTGGATATAGACCGGTTGA+TGG | 0.535505 | 2.4:+427357 | MS.gene067486:CDS |
GTCTATGGTTGGATATAGAC+CGG | 0.535718 | 2.4:+427350 | MS.gene067486:CDS |
TGGGGTGGGCGAGGTAGGCG+AGG | 0.540560 | 2.4:+425230 | MS.gene067486:CDS |
TGACACATCTGGAAACTCTC+AGG | 0.543785 | 2.4:+424969 | MS.gene067486:CDS |
TGTCCCATCTGCATTTCAGT+GGG | 0.554672 | 2.4:+428058 | MS.gene067486:CDS |
CTTATAATAACAGGAGTTTG+CGG | 0.555411 | 2.4:+428083 | MS.gene067486:CDS |
CACCACCTGACTCTCACTCT+CGG | 0.557224 | 2.4:+427415 | MS.gene067486:CDS |
GAGGTCAAGAAGCGAGGCCA+AGG | 0.561541 | 2.4:+424925 | MS.gene067486:CDS |
GATCAAGTAGGCGAAGATCA+CGG | 0.562420 | 2.4:-425041 | None:intergenic |
AGGAGAGACTGGAAGAGAGA+TGG | 0.565175 | 2.4:-427385 | None:intergenic |
CCCATCAACAATCCTTGGTA+GGG | 0.567511 | 2.4:+425077 | MS.gene067486:CDS |
GAGGCTTATCCGTTGCTGGA+TGG | 0.568522 | 2.4:+427042 | MS.gene067486:CDS |
TTGCAATACATATTTATCAA+GGG | 0.575605 | 2.4:-425172 | None:intergenic |
GGAGTCGACACGAGAGCATG+AGG | 0.579329 | 2.4:+427466 | MS.gene067486:CDS |
GGTTGCAATCTTTGGAGTGG+TGG | 0.579624 | 2.4:+427995 | MS.gene067486:CDS |
GTAGACTTGTTGCCCTGACT+AGG | 0.581008 | 2.4:+427118 | MS.gene067486:CDS |
TCAAGGAGTGGACGTTGTCG+AGG | 0.581652 | 2.4:+424906 | MS.gene067486:CDS |
TGGAAACTCTCAGGTCATTG+AGG | 0.582420 | 2.4:+424978 | MS.gene067486:CDS |
TTGAAAAGCTTGCCTTCCAG+AGG | 0.584149 | 2.4:-424887 | None:intergenic |
GTTGGTGTAGCTTCTTATAG+GGG | 0.584463 | 2.4:-428158 | None:intergenic |
AGGACCCACTGAAATGCAGA+TGG | 0.588506 | 2.4:-428062 | None:intergenic |
ACCCATCAACAATCCTTGGT+AGG | 0.588545 | 2.4:+425076 | MS.gene067486:CDS |
TACCGAGAAGAAAAGACGAA+TGG | 0.590299 | 2.4:+427305 | MS.gene067486:CDS |
ATCGACCAACGGCCTCTGGA+AGG | 0.591846 | 2.4:+424875 | MS.gene067486:CDS |
AAATGTGCATGCAGCCTCCA+GGG | 0.592181 | 2.4:-425370 | None:intergenic |
GCTTGCCTTCCAGAGGCCGT+TGG | 0.593665 | 2.4:-424880 | None:intergenic |
TGTGGTTGCAATCTTTGGAG+TGG | 0.599940 | 2.4:+427992 | MS.gene067486:CDS |
CCTGACTAGGAGAGTTCAGA+AGG | 0.604184 | 2.4:+427131 | MS.gene067486:CDS |
GTGTATTATTACAGCAGATG+AGG | 0.604721 | 2.4:+425134 | MS.gene067486:CDS |
CGGTTGACAACAGCTGGGGT+GGG | 0.611309 | 2.4:+425216 | MS.gene067486:CDS |
AGTAGGCGAAGATCACGGGC+AGG | 0.615154 | 2.4:-425036 | None:intergenic |
GGATCCACGATTTAAGACCT+TGG | 0.615463 | 2.4:-424942 | None:intergenic |
AACGACGGTTGACAACAGCT+GGG | 0.618774 | 2.4:+425211 | MS.gene067486:CDS |
ACCATTCTGACATGAACCAA+AGG | 0.623235 | 2.4:+425265 | MS.gene067486:CDS |
ACTCCCACCAAAACCTGCAT+CGG | 0.625380 | 2.4:+424828 | MS.gene067486:CDS |
TCAAGAGCCCTGAATTCGAA+AGG | 0.625788 | 2.4:-425342 | None:intergenic |
ATGTGATTGATCTTCAACGA+CGG | 0.626824 | 2.4:+425196 | MS.gene067486:CDS |
GAGCAGCTTATGGATGATGA+TGG | 0.627314 | 2.4:+427261 | MS.gene067486:CDS |
ATGCACATTTCTTGACACCC+AGG | 0.632838 | 2.4:+425383 | MS.gene067486:CDS |
AGACAAACACAGGATCAAGT+AGG | 0.642570 | 2.4:-425053 | None:intergenic |
CTTCTGAACTCTCCTAGTCA+GGG | 0.644832 | 2.4:-427130 | None:intergenic |
TTCGAAAGGTAAATAATCAG+GGG | 0.653361 | 2.4:-425328 | None:intergenic |
GATGTCAGTCCATCCAGCAA+CGG | 0.656707 | 2.4:-427051 | None:intergenic |
GAGGCCAAGGTCTTAAATCG+TGG | 0.657526 | 2.4:+424938 | MS.gene067486:CDS |
CACTCTAAACAAGTTGACAT+CGG | 0.667151 | 2.4:+427563 | MS.gene067486:CDS |
GTTGTCGAGGTCAAGAAGCG+AGG | 0.667662 | 2.4:+424919 | MS.gene067486:CDS |
CTCCGAGAGTGAGAGTCAGG+TGG | 0.667939 | 2.4:-427417 | None:intergenic |
AGAGGGTATCAATCGACCAA+CGG | 0.670365 | 2.4:+424864 | MS.gene067486:CDS |
GTTGATGGGTAGACAAACAC+AGG | 0.672622 | 2.4:-425063 | None:intergenic |
CACGGGCAGGAAGATCGCAA+CGG | 0.672945 | 2.4:-425023 | None:intergenic |
TATTATTACAGGATAATGTG+CGG | 0.676578 | 2.4:+427925 | MS.gene067486:intron |
GGACCCACTGAAATGCAGAT+GGG | 0.678111 | 2.4:-428061 | None:intergenic |
AGTTTCCAGATGTGTCAACA+CGG | 0.680366 | 2.4:-424963 | None:intergenic |
TAATGGCGGATCTCAAGGAG+CGG | 0.682101 | 2.4:+424803 | None:intergenic |
TCTGACATGAACCAAAGGAG+AGG | 0.687908 | 2.4:+425270 | MS.gene067486:CDS |
CACCTGACTCTCACTCTCGG+AGG | 0.701741 | 2.4:+427418 | MS.gene067486:CDS |
ACGACGGTTGACAACAGCTG+GGG | 0.707887 | 2.4:+425212 | MS.gene067486:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGTTATATTATACATTAT+AGG | - | chr2.4:426499-426518 | None:intergenic | 10.0% |
!!! | TTTTATGTATAATATAATGT+AGG | + | chr2.4:426344-426363 | MS.gene067486:intron | 10.0% |
!! | AATGTATAATATAACTTATG+TGG | + | chr2.4:426501-426520 | MS.gene067486:intron | 15.0% |
!! | ACAAAAAATACATAGAAAAA+AGG | + | chr2.4:426582-426601 | MS.gene067486:intron | 15.0% |
!! | ATATAAGTTTGATATACAAA+AGG | - | chr2.4:426131-426150 | None:intergenic | 15.0% |
!! | ATTTAATTGGAACAAATTAA+AGG | + | chr2.4:426395-426414 | MS.gene067486:intron | 15.0% |
!! | GTTACAATTAAATAACTTAA+AGG | + | chr2.4:426455-426474 | MS.gene067486:intron | 15.0% |
!! | GTTATTTAATTGTAACAAAT+TGG | - | chr2.4:426451-426470 | None:intergenic | 15.0% |
!! | TTCATTTATATAGAAAAAGA+AGG | + | chr2.4:426828-426847 | MS.gene067486:intron | 15.0% |
!!! | GATGTATATTAAATTTTGTT+TGG | + | chr2.4:425641-425660 | MS.gene067486:intron | 15.0% |
!!! | TTCTTTTTCTATATAAATGA+AGG | - | chr2.4:426829-426848 | None:intergenic | 15.0% |
!! | AAACTCAAGATCAAATAAAT+GGG | - | chr2.4:426085-426104 | None:intergenic | 20.0% |
!! | ACTAATAACCAAAATACAAT+AGG | - | chr2.4:427774-427793 | None:intergenic | 20.0% |
!! | ATTGCAATACATATTTATCA+AGG | - | chr2.4:425176-425195 | None:intergenic | 20.0% |
!! | CAAGTTCATAATTAAATCAA+AGG | + | chr2.4:425412-425431 | MS.gene067486:intron | 20.0% |
!! | TACAATGTATGTATTATTAC+AGG | + | chr2.4:427914-427933 | MS.gene067486:intron | 20.0% |
!! | TCTTCATATTATTGTTCATT+TGG | + | chr2.4:426956-426975 | MS.gene067486:intron | 20.0% |
!! | TGTTCCAATTAAATAACTTT+AGG | - | chr2.4:426389-426408 | None:intergenic | 20.0% |
!! | TTGCAATACATATTTATCAA+GGG | - | chr2.4:425175-425194 | None:intergenic | 20.0% |
!! | TTTCTATAGAATTGTTTACA+TGG | + | chr2.4:425527-425546 | MS.gene067486:intron | 20.0% |
!!! | TCTATAGAAATACAAGATTT+TGG | - | chr2.4:425517-425536 | None:intergenic | 20.0% |
!!! | TTTTAACTGAAACAAGAAAA+TGG | - | chr2.4:427660-427679 | None:intergenic | 20.0% |
! | AAATACAATAGGATAACCTT+TGG | - | chr2.4:427763-427782 | None:intergenic | 25.0% |
! | AATTCGAAAGGTAAATAATC+AGG | - | chr2.4:425333-425352 | None:intergenic | 25.0% |
! | AGCAATTAACAATTTAACAG+TGG | + | chr2.4:426678-426697 | MS.gene067486:intron | 25.0% |
! | AGTTAATATAGATAACAGTG+TGG | - | chr2.4:427596-427615 | None:intergenic | 25.0% |
! | AGTTGAAAATGACAATTGAT+AGG | + | chr2.4:427186-427205 | MS.gene067486:intron | 25.0% |
! | ATTATTTACCTTTCGAATTC+AGG | + | chr2.4:425334-425353 | MS.gene067486:CDS | 25.0% |
! | ATTCGAAAGGTAAATAATCA+GGG | - | chr2.4:425332-425351 | None:intergenic | 25.0% |
! | CAAACTCAAGATCAAATAAA+TGG | - | chr2.4:426086-426105 | None:intergenic | 25.0% |
! | GGTTCCTAAAGTTATTTAAT+TGG | + | chr2.4:426382-426401 | MS.gene067486:intron | 25.0% |
! | GTTAATATAGATAACAGTGT+GGG | - | chr2.4:427595-427614 | None:intergenic | 25.0% |
! | TAAATAACTTAAAGGACCTA+TGG | + | chr2.4:426463-426482 | MS.gene067486:intron | 25.0% |
! | TATTATTACAGGATAATGTG+CGG | + | chr2.4:427925-427944 | MS.gene067486:intron | 25.0% |
! | TCTATTTATCACTAACTTCT+AGG | - | chr2.4:426561-426580 | None:intergenic | 25.0% |
! | TGGTACGAAAAAAACTTAAA+GGG | + | chr2.4:426425-426444 | MS.gene067486:intron | 25.0% |
! | TTATTTACCTTTCGAATTCA+GGG | + | chr2.4:425335-425354 | MS.gene067486:CDS | 25.0% |
! | TTCTCTATTCTATTTGCAAA+AGG | + | chr2.4:427002-427021 | MS.gene067486:intron | 25.0% |
! | TTGTAAAACATGTGAATATG+AGG | - | chr2.4:426238-426257 | None:intergenic | 25.0% |
! | TTTATATAGAAAAAGAAGGC+CGG | + | chr2.4:426832-426851 | MS.gene067486:intron | 25.0% |
!! | AAGGTTATCCTATTGTATTT+TGG | + | chr2.4:427763-427782 | MS.gene067486:intron | 25.0% |
!! | AATCAAAGGCTATATTCTTT+TGG | + | chr2.4:425426-425445 | MS.gene067486:intron | 25.0% |
!! | ATATAACTTATGTGGTTTGT+TGG | + | chr2.4:426509-426528 | MS.gene067486:intron | 25.0% |
!!! | GGGAAGTATTATCATATTTA+AGG | + | chr2.4:425576-425595 | MS.gene067486:intron | 25.0% |
AAACGGTGATAGATAAATTG+TGG | - | chr2.4:427637-427656 | None:intergenic | 30.0% | |
AACAAATTAAAGGATGCAAG+TGG | + | chr2.4:426405-426424 | MS.gene067486:intron | 30.0% | |
AATTTCTTTCCATCATACCA+TGG | - | chr2.4:426781-426800 | None:intergenic | 30.0% | |
AGATTTCATCAACATTCAAC+TGG | + | chr2.4:427700-427719 | MS.gene067486:CDS | 30.0% | |
ATACTAATCAAGCAAGCATA+TGG | - | chr2.4:426931-426950 | None:intergenic | 30.0% | |
ATATACTTACCATGGTATGA+TGG | + | chr2.4:426769-426788 | MS.gene067486:intron | 30.0% | |
ATTATGAACTTGTACTAACC+TGG | - | chr2.4:425404-425423 | None:intergenic | 30.0% | |
CAAATCACAAATGAACTTGT+AGG | + | chr2.4:425600-425619 | MS.gene067486:intron | 30.0% | |
CAATATTAGCTCAGCAAATA+TGG | - | chr2.4:427214-427233 | None:intergenic | 30.0% | |
CATATTTATCAAGGGAATTC+AGG | - | chr2.4:425167-425186 | None:intergenic | 30.0% | |
CTGAAACAAGAAAATGGAAA+CGG | - | chr2.4:427654-427673 | None:intergenic | 30.0% | |
CTTATAATAACAGGAGTTTG+CGG | + | chr2.4:428083-428102 | MS.gene067486:CDS | 30.0% | |
GAAGATCAGTACTCTAAATT+TGG | + | chr2.4:427074-427093 | MS.gene067486:CDS | 30.0% | |
GTGGTACGAAAAAAACTTAA+AGG | + | chr2.4:426424-426443 | MS.gene067486:intron | 30.0% | |
TAATGCAGTTACTCTAATAC+TGG | - | chr2.4:425688-425707 | None:intergenic | 30.0% | |
TAGATAAATTGTGGTGAAGT+TGG | - | chr2.4:427628-427647 | None:intergenic | 30.0% | |
TATAGGCTAAATTACACCAT+AGG | - | chr2.4:426482-426501 | None:intergenic | 30.0% | |
TGTTTATTCTGGTGAAATGT+AGG | + | chr2.4:426651-426670 | MS.gene067486:intron | 30.0% | |
TTATATAGAAAAAGAAGGCC+GGG | + | chr2.4:426833-426852 | MS.gene067486:intron | 30.0% | |
TTATATCAAGGAACTCTGAT+TGG | + | chr2.4:425830-425849 | MS.gene067486:intron | 30.0% | |
TTATGAACTTGTACTAACCT+GGG | - | chr2.4:425403-425422 | None:intergenic | 30.0% | |
TTCGAAAGGTAAATAATCAG+GGG | - | chr2.4:425331-425350 | None:intergenic | 30.0% | |
TTTCTCATATTAGTCACCAA+AGG | + | chr2.4:427744-427763 | MS.gene067486:intron | 30.0% | |
! | AGAAGGTGATGTTCATTTTA+TGG | + | chr2.4:427148-427167 | MS.gene067486:intron | 30.0% |
! | ATGGTATGATGGAAAGAAAT+TGG | + | chr2.4:426780-426799 | MS.gene067486:intron | 30.0% |
! | ATTTTATGGAGATCAGTCTA+TGG | + | chr2.4:427335-427354 | MS.gene067486:CDS | 30.0% |
! | CACATGTTTTACAAAGCAAT+GGG | + | chr2.4:426244-426263 | MS.gene067486:intron | 30.0% |
! | GTATATTTTCTGCATTTGTG+TGG | + | chr2.4:428111-428130 | MS.gene067486:CDS | 30.0% |
! | TATTTGCTGAGCTAATATTG+TGG | + | chr2.4:427214-427233 | MS.gene067486:intron | 30.0% |
! | TCACATGTTTTACAAAGCAA+TGG | + | chr2.4:426243-426262 | MS.gene067486:intron | 30.0% |
!! | CTCTAGAATGGTTTCTTTAT+AGG | + | chr2.4:426194-426213 | MS.gene067486:intron | 30.0% |
!! | CTTACTTTAGAACAGAGAAA+TGG | + | chr2.4:425481-425500 | MS.gene067486:intron | 30.0% |
!! | TCATCTACTTTTCTTGTCAT+TGG | + | chr2.4:426157-426176 | MS.gene067486:intron | 30.0% |
!! | TCTACTTGCTATGTTTATTC+TGG | + | chr2.4:426640-426659 | MS.gene067486:intron | 30.0% |
!!! | CGAATGGAATTGTCATTTTA+TGG | + | chr2.4:427321-427340 | MS.gene067486:CDS | 30.0% |
AAACATGTGAATATGAGGTG+TGG | - | chr2.4:426233-426252 | None:intergenic | 35.0% | |
AATAAATGGGTAACTGCACT+TGG | - | chr2.4:426072-426091 | None:intergenic | 35.0% | |
ACATTTGTGGTTGCAATCTT+TGG | + | chr2.4:427987-428006 | MS.gene067486:CDS | 35.0% | |
AGATGAAATAGAGCAGCTTA+TGG | + | chr2.4:427251-427270 | MS.gene067486:CDS | 35.0% | |
AGTACTAGTTGTGAATCTTG+TGG | - | chr2.4:426293-426312 | None:intergenic | 35.0% | |
ATAAATGGGTAACTGCACTT+GGG | - | chr2.4:426071-426090 | None:intergenic | 35.0% | |
ATGTGATTGATCTTCAACGA+CGG | + | chr2.4:425196-425215 | MS.gene067486:CDS | 35.0% | |
CATACAGACAACGCATAATT+GGG | + | chr2.4:427837-427856 | MS.gene067486:intron | 35.0% | |
CGCAAACTCCTGTTATTATA+AGG | - | chr2.4:428085-428104 | None:intergenic | 35.0% | |
GAGACAAGCACTTTATATCA+AGG | + | chr2.4:425818-425837 | MS.gene067486:intron | 35.0% | |
GCAACAGAATATTCTAGACT+CGG | - | chr2.4:425976-425995 | None:intergenic | 35.0% | |
GGTGACTAATATGAGAAAGA+AGG | - | chr2.4:427742-427761 | None:intergenic | 35.0% | |
GTGTATTATTACAGCAGATG+AGG | + | chr2.4:425134-425153 | MS.gene067486:CDS | 35.0% | |
TCATACAGACAACGCATAAT+TGG | + | chr2.4:427836-427855 | MS.gene067486:intron | 35.0% | |
TGAGTTTCTGCATGCAATAT+GGG | + | chr2.4:425556-425575 | MS.gene067486:intron | 35.0% | |
TGGAGGATATATACTTACCA+TGG | + | chr2.4:426761-426780 | MS.gene067486:intron | 35.0% | |
TGGTAAGTATATATCCTCCA+TGG | - | chr2.4:426761-426780 | None:intergenic | 35.0% | |
TGTAGGCTAAATTACACTAG+AGG | + | chr2.4:426361-426380 | MS.gene067486:intron | 35.0% | |
TTAGAGAAAGCCAGTATGTA+TGG | + | chr2.4:426002-426021 | MS.gene067486:intron | 35.0% | |
TTGAGTTTCTGCATGCAATA+TGG | + | chr2.4:425555-425574 | MS.gene067486:intron | 35.0% | |
TTGTAAATCTCGAGCAGATA+CGG | + | chr2.4:425112-425131 | MS.gene067486:CDS | 35.0% | |
! | CACTCTAAACAAGTTGACAT+CGG | + | chr2.4:427563-427582 | MS.gene067486:CDS | 35.0% |
! | GAGTCTAGAATATTCTGTTG+CGG | + | chr2.4:425975-425994 | MS.gene067486:intron | 35.0% |
! | TCTTTTTGTGCCATACATAC+TGG | - | chr2.4:426015-426034 | None:intergenic | 35.0% |
! | TGTTGGTGGAAAAATTCACT+AGG | + | chr2.4:426526-426545 | MS.gene067486:intron | 35.0% |
! | TTCCATTCGTCTTTTCTTCT+CGG | - | chr2.4:427310-427329 | None:intergenic | 35.0% |
!! | TAACTTATGTGGTTTGTTGG+TGG | + | chr2.4:426512-426531 | MS.gene067486:intron | 35.0% |
!! | TATGGATGATGATGGTGATA+TGG | + | chr2.4:427269-427288 | MS.gene067486:CDS | 35.0% |
!! | TCTACTTTTCTTGTCATTGG+TGG | + | chr2.4:426160-426179 | MS.gene067486:intron | 35.0% |
AACAATCCTTGGTAGGGAAA+AGG | + | chr2.4:425083-425102 | MS.gene067486:CDS | 40.0% | |
AATTCCTATTGCCTCTCCTT+TGG | - | chr2.4:425284-425303 | None:intergenic | 40.0% | |
ACCATTCTGACATGAACCAA+AGG | + | chr2.4:425265-425284 | MS.gene067486:CDS | 40.0% | |
AGACAAACACAGGATCAAGT+AGG | - | chr2.4:425056-425075 | None:intergenic | 40.0% | |
AGTTTCCAGATGTGTCAACA+CGG | - | chr2.4:424966-424985 | None:intergenic | 40.0% | |
CAGTGGGTCCTTATAATAAC+AGG | + | chr2.4:428074-428093 | MS.gene067486:CDS | 40.0% | |
GCAGATGGGACATCAAATAA+TGG | - | chr2.4:428050-428069 | None:intergenic | 40.0% | |
GCAGTCTGTAACTGTCTAAA+AGG | - | chr2.4:425781-425800 | None:intergenic | 40.0% | |
GCATTCTGTTACCACAAAAG+AGG | - | chr2.4:425954-425973 | None:intergenic | 40.0% | |
GCTAATATTGTGGATGTGTC+AGG | + | chr2.4:427224-427243 | MS.gene067486:intron | 40.0% | |
GTCTATGGTTGGATATAGAC+CGG | + | chr2.4:427350-427369 | MS.gene067486:CDS | 40.0% | |
GTTACCACAAAAGAGGTTTC+TGG | - | chr2.4:425947-425966 | None:intergenic | 40.0% | |
GTTGTCTGTATGAGTATGTG+TGG | - | chr2.4:427829-427848 | None:intergenic | 40.0% | |
TAAATGGGTAACTGCACTTG+GGG | - | chr2.4:426070-426089 | None:intergenic | 40.0% | |
TACAGACTGCTTTCTGTTCA+CGG | + | chr2.4:425791-425810 | MS.gene067486:intron | 40.0% | |
TACCGAGAAGAAAAGACGAA+TGG | + | chr2.4:427305-427324 | MS.gene067486:CDS | 40.0% | |
TATGGAGATCAGTCTATGGT+TGG | + | chr2.4:427339-427358 | MS.gene067486:CDS | 40.0% | |
TCTCTGGCATCAAATCAACT+TGG | - | chr2.4:426732-426751 | None:intergenic | 40.0% | |
TTGAAATCATCCCAAGCAAC+AGG | - | chr2.4:426324-426343 | None:intergenic | 40.0% | |
TTGTGAGCAAAAGCTCAAAC+TGG | - | chr2.4:427962-427981 | None:intergenic | 40.0% | |
TTTCACAGGATTTCTTGTCC+CGG | - | chr2.4:426854-426873 | None:intergenic | 40.0% | |
! | ATAGCCAGAAACCTCTTTTG+TGG | + | chr2.4:425940-425959 | MS.gene067486:intron | 40.0% |
! | GCACATCAACACATTTTCAC+AGG | - | chr2.4:426868-426887 | None:intergenic | 40.0% |
! | TCCTTTGGTTCATGTCAGAA+TGG | - | chr2.4:425269-425288 | None:intergenic | 40.0% |
! | TCGGCTTTTAACGTAAGAGA+GGG | + | chr2.4:424847-424866 | MS.gene067486:CDS | 40.0% |
! | TTAAAAGCCGATGCAGGTTT+TGG | - | chr2.4:424838-424857 | None:intergenic | 40.0% |
! | TTCGTCTTTTCTTCTCGGTA+AGG | - | chr2.4:427305-427324 | None:intergenic | 40.0% |
!! | ATCGGCTTTTAACGTAAGAG+AGG | + | chr2.4:424846-424865 | MS.gene067486:CDS | 40.0% |
AAATTCCGTGAGAGATGCAC+AGG | - | chr2.4:426621-426640 | None:intergenic | 45.0% | |
AATTGAGGCTTATCCGTTGC+TGG | + | chr2.4:427038-427057 | MS.gene067486:CDS | 45.0% | |
ACAGACAACGCATAATTGGG+AGG | + | chr2.4:427840-427859 | MS.gene067486:intron | 45.0% | |
ACCCATCAACAATCCTTGGT+AGG | + | chr2.4:425076-425095 | MS.gene067486:CDS | 45.0% | |
ACTATTCTGTGCCTGTTGCT+TGG | + | chr2.4:426310-426329 | MS.gene067486:intron | 45.0% | |
AGACAACGCATAATTGGGAG+GGG | + | chr2.4:427842-427861 | MS.gene067486:intron | 45.0% | |
ATCAAGTAGGCGAAGATCAC+GGG | - | chr2.4:425043-425062 | None:intergenic | 45.0% | |
ATGCACATTTCTTGACACCC+AGG | + | chr2.4:425383-425402 | MS.gene067486:CDS | 45.0% | |
ATGTCCCATCTGCATTTCAG+TGG | + | chr2.4:428057-428076 | MS.gene067486:CDS | 45.0% | |
CAGACAACGCATAATTGGGA+GGG | + | chr2.4:427841-427860 | MS.gene067486:intron | 45.0% | |
CCCATCAACAATCCTTGGTA+GGG | + | chr2.4:425077-425096 | MS.gene067486:CDS | 45.0% | |
CCCTACCAAGGATTGTTGAT+GGG | - | chr2.4:425080-425099 | None:intergenic | 45.0% | |
CTTACGTTAAAAGCCGATGC+AGG | - | chr2.4:424844-424863 | None:intergenic | 45.0% | |
CTTCTGAACTCTCCTAGTCA+GGG | - | chr2.4:427133-427152 | None:intergenic | 45.0% | |
GAGCAGCTTATGGATGATGA+TGG | + | chr2.4:427261-427280 | MS.gene067486:CDS | 45.0% | |
GAGTGGTGGCAGGAATATTT+GGG | + | chr2.4:428009-428028 | MS.gene067486:CDS | 45.0% | |
GATCAAGTAGGCGAAGATCA+CGG | - | chr2.4:425044-425063 | None:intergenic | 45.0% | |
GCTCACAACTGCAACATTTG+TGG | + | chr2.4:427974-427993 | MS.gene067486:CDS | 45.0% | |
GGCAGCAGAGTTAGAAATTG+AGG | + | chr2.4:427023-427042 | MS.gene067486:intron | 45.0% | |
GTCTACCCATCAACAATCCT+TGG | + | chr2.4:425072-425091 | MS.gene067486:CDS | 45.0% | |
GTTGGATATAGACCGGTTGA+TGG | + | chr2.4:427357-427376 | MS.gene067486:CDS | 45.0% | |
TCAAGAGCCCTGAATTCGAA+AGG | - | chr2.4:425345-425364 | None:intergenic | 45.0% | |
TCCCTACCAAGGATTGTTGA+TGG | - | chr2.4:425081-425100 | None:intergenic | 45.0% | |
TCTGACATGAACCAAAGGAG+AGG | + | chr2.4:425270-425289 | MS.gene067486:CDS | 45.0% | |
TGAACCAAAGGAGAGGCAAT+AGG | + | chr2.4:425277-425296 | MS.gene067486:CDS | 45.0% | |
TGACACATCTGGAAACTCTC+AGG | + | chr2.4:424969-424988 | MS.gene067486:CDS | 45.0% | |
TGGAAACTCTCAGGTCATTG+AGG | + | chr2.4:424978-424997 | MS.gene067486:CDS | 45.0% | |
TGTCCCATCTGCATTTCAGT+GGG | + | chr2.4:428058-428077 | MS.gene067486:CDS | 45.0% | |
TTGAAAAGCTTGCCTTCCAG+AGG | - | chr2.4:424890-424909 | None:intergenic | 45.0% | |
! | AGAAGAGCTTGAGCATTGCT+AGG | + | chr2.4:427445-427464 | MS.gene067486:CDS | 45.0% |
! | CAATAGCCTTTTCCCTACCA+AGG | - | chr2.4:425092-425111 | None:intergenic | 45.0% |
! | CTAATACTGGCCTCAATCAG+TGG | - | chr2.4:425675-425694 | None:intergenic | 45.0% |
! | CTATTCTGTGCCTGTTGCTT+GGG | + | chr2.4:426311-426330 | MS.gene067486:intron | 45.0% |
! | GCATGTTTCGCACTCTAGAA+TGG | + | chr2.4:426182-426201 | MS.gene067486:intron | 45.0% |
! | GGATCCACGATTTAAGACCT+TGG | - | chr2.4:424945-424964 | None:intergenic | 45.0% |
! | GTTGATGGGTAGACAAACAC+AGG | - | chr2.4:425066-425085 | None:intergenic | 45.0% |
! | TCTGGAAGGCAAGCTTTTCA+AGG | + | chr2.4:424889-424908 | MS.gene067486:CDS | 45.0% |
! | TGTGGTTGCAATCTTTGGAG+TGG | + | chr2.4:427992-428011 | MS.gene067486:CDS | 45.0% |
!! | AAGGCAAGCTTTTCAAGGAG+TGG | + | chr2.4:424894-424913 | MS.gene067486:CDS | 45.0% |
!! | AGAGGGTATCAATCGACCAA+CGG | + | chr2.4:424864-424883 | MS.gene067486:CDS | 45.0% |
AAATGTGCATGCAGCCTCCA+GGG | - | chr2.4:425373-425392 | None:intergenic | 50.0% | |
AACGACGGTTGACAACAGCT+GGG | + | chr2.4:425211-425230 | MS.gene067486:CDS | 50.0% | |
AACGAGAACCGAGAAGAGCT+AGG | - | chr2.4:425897-425916 | None:intergenic | 50.0% | |
ACGAGAACCGAGAAGAGCTA+GGG | - | chr2.4:425896-425915 | None:intergenic | 50.0% | |
ACTCCCACCAAAACCTGCAT+CGG | + | chr2.4:424828-424847 | MS.gene067486:CDS | 50.0% | |
ACTGCTTTCTGTTCACGGTC+AGG | + | chr2.4:425796-425815 | MS.gene067486:intron | 50.0% | |
AGGACCCACTGAAATGCAGA+TGG | - | chr2.4:428065-428084 | None:intergenic | 50.0% | |
AGGAGAGACTGGAAGAGAGA+TGG | - | chr2.4:427388-427407 | None:intergenic | 50.0% | |
CCTGACTAGGAGAGTTCAGA+AGG | + | chr2.4:427131-427150 | MS.gene067486:CDS | 50.0% | |
CCTTCTGAACTCTCCTAGTC+AGG | - | chr2.4:427134-427153 | None:intergenic | 50.0% | |
CGAGAAGAGCTAGGGAGAAA+GGG | - | chr2.4:425888-425907 | None:intergenic | 50.0% | |
GACAACGCATAATTGGGAGG+GGG | + | chr2.4:427843-427862 | MS.gene067486:intron | 50.0% | |
GAGATGGATGCACCATCAAC+CGG | - | chr2.4:427372-427391 | None:intergenic | 50.0% | |
GAGGCCAAGGTCTTAAATCG+TGG | + | chr2.4:424938-424957 | MS.gene067486:CDS | 50.0% | |
GATGTCAGTCCATCCAGCAA+CGG | - | chr2.4:427054-427073 | None:intergenic | 50.0% | |
GGACCCACTGAAATGCAGAT+GGG | - | chr2.4:428064-428083 | None:intergenic | 50.0% | |
GGAGTGGTGGCAGGAATATT+TGG | + | chr2.4:428008-428027 | MS.gene067486:CDS | 50.0% | |
GGTGATGAAACAGGAGAGAC+TGG | - | chr2.4:427399-427418 | None:intergenic | 50.0% | |
GTGAACCTGTGCATCTCTCA+CGG | + | chr2.4:426613-426632 | MS.gene067486:intron | 50.0% | |
! | CCTTTCTCCCTAGCTCTTCT+CGG | + | chr2.4:425886-425905 | MS.gene067486:intron | 50.0% |
! | GAGTCAGGTGGTGATGAAAC+AGG | - | chr2.4:427408-427427 | None:intergenic | 50.0% |
! | GGATCTGTGTCCACTGATTG+AGG | + | chr2.4:425662-425681 | MS.gene067486:intron | 50.0% |
! | TGGATCCGTGTTGACACATC+TGG | + | chr2.4:424958-424977 | MS.gene067486:CDS | 50.0% |
!! | AAAGCCGATGCAGGTTTTGG+TGG | - | chr2.4:424835-424854 | None:intergenic | 50.0% |
!! | AAGCCGATGCAGGTTTTGGT+GGG | - | chr2.4:424834-424853 | None:intergenic | 50.0% |
!! | GGTTGCAATCTTTGGAGTGG+TGG | + | chr2.4:427995-428014 | MS.gene067486:CDS | 50.0% |
!! | GTAGACTTGTTGCCCTGACT+AGG | + | chr2.4:427118-427137 | MS.gene067486:CDS | 50.0% |
AACGCATAATTGGGAGGGGG+AGG | + | chr2.4:427846-427865 | MS.gene067486:intron | 55.0% | |
ACGACGGTTGACAACAGCTG+GGG | + | chr2.4:425212-425231 | MS.gene067486:CDS | 55.0% | |
ACGCATAATTGGGAGGGGGA+GGG | + | chr2.4:427847-427866 | MS.gene067486:intron | 55.0% | |
ATCAATCGACCAACGGCCTC+TGG | + | chr2.4:424871-424890 | MS.gene067486:CDS | 55.0% | |
CAACGACGGTTGACAACAGC+TGG | + | chr2.4:425210-425229 | MS.gene067486:CDS | 55.0% | |
CACCACCTGACTCTCACTCT+CGG | + | chr2.4:427415-427434 | MS.gene067486:CDS | 55.0% | |
CCGAGAAGAGCTAGGGAGAA+AGG | - | chr2.4:425889-425908 | None:intergenic | 55.0% | |
GAAATGTGCATGCAGCCTCC+AGG | - | chr2.4:425374-425393 | None:intergenic | 55.0% | |
GAGGCTTATCCGTTGCTGGA+TGG | + | chr2.4:427042-427061 | MS.gene067486:CDS | 55.0% | |
GATGCCAGAGACATCGACCA+TGG | + | chr2.4:426741-426760 | MS.gene067486:intron | 55.0% | |
GGGTAACTGCACTTGGGGAT+GGG | - | chr2.4:426065-426084 | None:intergenic | 55.0% | |
GTTGTCGAGGTCAAGAAGCG+AGG | + | chr2.4:424919-424938 | MS.gene067486:CDS | 55.0% | |
TCAAGGAGTGGACGTTGTCG+AGG | + | chr2.4:424906-424925 | MS.gene067486:CDS | 55.0% | |
TCCTCCATGGTCGATGTCTC+TGG | - | chr2.4:426748-426767 | None:intergenic | 55.0% | |
TGGGTAACTGCACTTGGGGA+TGG | - | chr2.4:426066-426085 | None:intergenic | 55.0% | |
!! | GCAATCTTTGGAGTGGTGGC+AGG | + | chr2.4:427999-428018 | MS.gene067486:CDS | 55.0% |
ACGGTTGACAACAGCTGGGG+TGG | + | chr2.4:425215-425234 | MS.gene067486:CDS | 60.0% | |
AGCCTCCGAGAGTGAGAGTC+AGG | - | chr2.4:427423-427442 | None:intergenic | 60.0% | |
AGTAGGCGAAGATCACGGGC+AGG | - | chr2.4:425039-425058 | None:intergenic | 60.0% | |
ATCGACCAACGGCCTCTGGA+AGG | + | chr2.4:424875-424894 | MS.gene067486:CDS | 60.0% | |
CACCTGACTCTCACTCTCGG+AGG | + | chr2.4:427418-427437 | MS.gene067486:CDS | 60.0% | |
CACGGGCAGGAAGATCGCAA+CGG | - | chr2.4:425026-425045 | None:intergenic | 60.0% | |
CAGGGCTCTTGAAGTTGCCC+TGG | + | chr2.4:425353-425372 | MS.gene067486:CDS | 60.0% | |
CGGTTGACAACAGCTGGGGT+GGG | + | chr2.4:425216-425235 | MS.gene067486:CDS | 60.0% | |
CTCCGAGAGTGAGAGTCAGG+TGG | - | chr2.4:427420-427439 | None:intergenic | 60.0% | |
GAGGTCAAGAAGCGAGGCCA+AGG | + | chr2.4:424925-424944 | MS.gene067486:CDS | 60.0% | |
GCCAGAGACATCGACCATGG+AGG | + | chr2.4:426744-426763 | MS.gene067486:intron | 60.0% | |
GGCTCTTGAAGTTGCCCTGG+AGG | + | chr2.4:425356-425375 | MS.gene067486:CDS | 60.0% | |
! | GGAGTCGACACGAGAGCATG+AGG | + | chr2.4:427466-427485 | MS.gene067486:CDS | 60.0% |
GCTTGCCTTCCAGAGGCCGT+TGG | - | chr2.4:424883-424902 | None:intergenic | 65.0% | |
ACAGCTGGGGTGGGCGAGGT+AGG | + | chr2.4:425225-425244 | MS.gene067486:CDS | 70.0% | |
GACAACAGCTGGGGTGGGCG+AGG | + | chr2.4:425221-425240 | MS.gene067486:CDS | 70.0% | |
TGGGCGAGGTAGGCGAGGTC+TGG | + | chr2.4:425235-425254 | MS.gene067486:CDS | 70.0% | |
TGGGGTGGGCGAGGTAGGCG+AGG | + | chr2.4:425230-425249 | MS.gene067486:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 424805 | 428166 | 424805 | ID=MS.gene067486 |
chr2.4 | mRNA | 424805 | 428166 | 424805 | ID=MS.gene067486.t1;Parent=MS.gene067486 |
chr2.4 | exon | 424805 | 425404 | 424805 | ID=MS.gene067486.t1.exon1;Parent=MS.gene067486.t1 |
chr2.4 | CDS | 424805 | 425404 | 424805 | ID=cds.MS.gene067486.t1;Parent=MS.gene067486.t1 |
chr2.4 | exon | 427024 | 427152 | 427024 | ID=MS.gene067486.t1.exon2;Parent=MS.gene067486.t1 |
chr2.4 | CDS | 427024 | 427152 | 427024 | ID=cds.MS.gene067486.t1;Parent=MS.gene067486.t1 |
chr2.4 | exon | 427246 | 427584 | 427246 | ID=MS.gene067486.t1.exon3;Parent=MS.gene067486.t1 |
chr2.4 | CDS | 427246 | 427584 | 427246 | ID=cds.MS.gene067486.t1;Parent=MS.gene067486.t1 |
chr2.4 | exon | 427674 | 427721 | 427674 | ID=MS.gene067486.t1.exon4;Parent=MS.gene067486.t1 |
chr2.4 | CDS | 427674 | 427721 | 427674 | ID=cds.MS.gene067486.t1;Parent=MS.gene067486.t1 |
chr2.4 | exon | 427936 | 428166 | 427936 | ID=MS.gene067486.t1.exon5;Parent=MS.gene067486.t1 |
chr2.4 | CDS | 427936 | 428166 | 427936 | ID=cds.MS.gene067486.t1;Parent=MS.gene067486.t1 |
Gene Sequence |
Protein sequence |