Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071246.t1 | XP_013465620.1 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 9.90E-246 | 859 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071246.t1 | Q9S9N4 | 82.6 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 5.4e-200 | 698.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071246.t1 | G7ZYX9 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 7.1e-246 | 859.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057130 | MS.gene071246 | -0.805435 | 1.34E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene063969 | MS.gene071246 | PPI |
MS.gene98061 | MS.gene071246 | PPI |
MS.gene071246 | MS.gene063967 | PPI |
MS.gene40181 | MS.gene071246 | PPI |
MS.gene40853 | MS.gene071246 | PPI |
MS.gene046935 | MS.gene071246 | PPI |
MS.gene92350 | MS.gene071246 | PPI |
MS.gene024949 | MS.gene071246 | PPI |
MS.gene054723 | MS.gene071246 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071246.t1 | MTR_2g105270 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
MS.gene071246.t1 | MTR_2g105270 | 99.731 | 372 | 1 | 0 | 1 | 372 | 1 | 372 | 0.0 | 754 |
MS.gene071246.t1 | MTR_2g105270 | 99.440 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 0.0 | 724 |
MS.gene071246.t1 | MTR_5g045590 | 52.941 | 425 | 152 | 5 | 31 | 447 | 20 | 404 | 8.47e-143 | 414 |
MS.gene071246.t1 | MTR_5g005240 | 46.018 | 452 | 199 | 9 | 24 | 446 | 8 | 443 | 1.38e-115 | 346 |
MS.gene071246.t1 | MTR_1g076210 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
MS.gene071246.t1 | MTR_1g093280 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
MS.gene071246.t1 | MTR_1g040495 | 43.846 | 390 | 171 | 7 | 51 | 437 | 15 | 359 | 1.28e-98 | 300 |
MS.gene071246.t1 | MTR_1g106065 | 41.135 | 423 | 216 | 9 | 41 | 445 | 11 | 418 | 2.67e-94 | 291 |
MS.gene071246.t1 | MTR_8g088670 | 42.647 | 408 | 193 | 9 | 43 | 446 | 50 | 420 | 2.57e-93 | 288 |
MS.gene071246.t1 | MTR_8g094880 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
MS.gene071246.t1 | MTR_8g094905 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
MS.gene071246.t1 | MTR_7g096170 | 45.771 | 402 | 173 | 7 | 43 | 438 | 17 | 379 | 3.74e-91 | 281 |
MS.gene071246.t1 | MTR_7g096170 | 46.114 | 386 | 164 | 6 | 43 | 423 | 17 | 363 | 1.34e-87 | 272 |
MS.gene071246.t1 | MTR_7g096170 | 45.946 | 333 | 137 | 5 | 43 | 371 | 17 | 310 | 5.70e-70 | 224 |
MS.gene071246.t1 | MTR_8g088670 | 42.089 | 316 | 148 | 6 | 43 | 357 | 50 | 331 | 1.01e-64 | 212 |
MS.gene071246.t1 | MTR_8g088670 | 41.250 | 320 | 153 | 6 | 43 | 361 | 50 | 335 | 1.11e-64 | 212 |
MS.gene071246.t1 | MTR_7g096170 | 49.237 | 262 | 107 | 5 | 179 | 438 | 45 | 282 | 3.44e-60 | 198 |
MS.gene071246.t1 | MTR_1g040475 | 44.041 | 193 | 89 | 2 | 51 | 243 | 19 | 192 | 1.00e-42 | 150 |
MS.gene071246.t1 | MTR_1g076220 | 37.262 | 263 | 109 | 5 | 185 | 446 | 21 | 228 | 1.27e-40 | 145 |
MS.gene071246.t1 | MTR_1g093370 | 46.753 | 154 | 78 | 2 | 297 | 446 | 13 | 166 | 1.17e-34 | 127 |
MS.gene071246.t1 | MTR_2g059110 | 55.000 | 80 | 36 | 0 | 42 | 121 | 8 | 87 | 2.40e-23 | 94.4 |
MS.gene071246.t1 | MTR_2g059120 | 59.091 | 66 | 27 | 0 | 56 | 121 | 20 | 85 | 1.99e-19 | 83.6 |
MS.gene071246.t1 | MTR_1g040455 | 41.414 | 99 | 53 | 2 | 351 | 446 | 1 | 97 | 6.51e-18 | 79.3 |
MS.gene071246.t1 | MTR_1g055050 | 42.857 | 133 | 72 | 3 | 139 | 271 | 12 | 140 | 3.92e-17 | 81.3 |
MS.gene071246.t1 | MTR_8g098970 | 67.308 | 52 | 17 | 0 | 241 | 292 | 1 | 52 | 1.06e-16 | 74.7 |
MS.gene071246.t1 | MTR_2g100150 | 32.955 | 176 | 68 | 6 | 50 | 221 | 15 | 144 | 3.72e-15 | 73.6 |
MS.gene071246.t1 | MTR_2g084565 | 22.727 | 396 | 233 | 6 | 53 | 445 | 118 | 443 | 5.11e-14 | 73.9 |
MS.gene071246.t1 | MTR_8g098965 | 50.000 | 90 | 27 | 3 | 200 | 289 | 47 | 118 | 6.49e-14 | 68.9 |
MS.gene071246.t1 | MTR_3g020210 | 80.556 | 36 | 7 | 0 | 265 | 300 | 51 | 86 | 1.29e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
MS.gene071246.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
MS.gene071246.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
MS.gene071246.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
MS.gene071246.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
MS.gene071246.t1 | AT3G19640 | 44.843 | 446 | 188 | 10 | 51 | 446 | 46 | 483 | 1.83e-114 | 345 |
MS.gene071246.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 27 | 395 | 1.20e-108 | 327 |
MS.gene071246.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 16 | 384 | 1.50e-108 | 326 |
MS.gene071246.t1 | AT5G09690 | 49.482 | 386 | 150 | 8 | 39 | 421 | 27 | 370 | 1.52e-104 | 316 |
MS.gene071246.t1 | AT3G58970 | 41.805 | 421 | 190 | 9 | 41 | 446 | 54 | 434 | 1.32e-98 | 302 |
MS.gene071246.t1 | AT5G64560 | 45.985 | 411 | 186 | 5 | 39 | 446 | 15 | 392 | 5.64e-95 | 291 |
MS.gene071246.t1 | AT5G09690 | 49.143 | 350 | 130 | 5 | 39 | 384 | 16 | 321 | 4.17e-93 | 284 |
MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
MS.gene071246.t1 | AT5G09690 | 50.437 | 343 | 130 | 6 | 39 | 381 | 27 | 329 | 6.31e-93 | 285 |
MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 16 | 318 | 6.55e-93 | 284 |
MS.gene071246.t1 | AT5G09690 | 49.280 | 347 | 128 | 5 | 39 | 381 | 16 | 318 | 7.00e-93 | 284 |
MS.gene071246.t1 | AT5G64560 | 48.518 | 371 | 156 | 5 | 39 | 407 | 15 | 352 | 4.63e-91 | 281 |
MS.gene071246.t1 | AT5G09690 | 43.066 | 411 | 174 | 8 | 39 | 446 | 16 | 369 | 1.37e-87 | 272 |
MS.gene071246.t1 | AT5G09690 | 45.875 | 303 | 124 | 6 | 43 | 345 | 20 | 282 | 1.36e-67 | 218 |
MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
MS.gene071246.t1 | AT4G28580 | 36.430 | 409 | 208 | 11 | 43 | 446 | 46 | 407 | 8.05e-67 | 219 |
MS.gene071246.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
MS.gene071246.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
MS.gene071246.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
MS.gene071246.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
Find 111 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGTGGTGGCAGGAATATT+TGG | 0.196891 | 2.1:+708975 | MS.gene071246:CDS |
ATTATTTACCTTTCGAATTC+AGG | 0.197360 | 2.1:+706301 | MS.gene071246:CDS |
GAAGATCAGTACTCTAAATT+TGG | 0.251205 | 2.1:+708041 | MS.gene071246:CDS |
CATATTTATCAAGGGAATTC+AGG | 0.256762 | 2.1:-706131 | None:intergenic |
ACATTTGTGGTTGCAATCTT+TGG | 0.293975 | 2.1:+708954 | MS.gene071246:CDS |
CGCAAACTCCTGTTATTATA+AGG | 0.306482 | 2.1:-709049 | None:intergenic |
CAGTGGGTCCTTATAATAAC+AGG | 0.314280 | 2.1:+709041 | MS.gene071246:CDS |
GAGTGGTGGCAGGAATATTT+GGG | 0.321680 | 2.1:+708976 | MS.gene071246:CDS |
TTAAAAGCGGATGCAGGTTT+TGG | 0.321979 | 2.1:-705802 | None:intergenic |
TGTTGGTGTAGCTTCTTATA+GGG | 0.330077 | 2.1:-709126 | None:intergenic |
AATTCCTATTGCCTCTCCTT+TGG | 0.347908 | 2.1:-706248 | None:intergenic |
TGGGCGAGGTGGGCGAGGTC+TGG | 0.351158 | 2.1:+706202 | MS.gene071246:CDS |
AATTCGAAAGGTAAATAATC+AGG | 0.361564 | 2.1:-706297 | None:intergenic |
TGGGGTGGGCGAGGTGGGCG+AGG | 0.366635 | 2.1:+706197 | MS.gene071246:CDS |
ATCAATCGACCAACGGCCTC+TGG | 0.379573 | 2.1:+705838 | MS.gene071246:CDS |
AATTGAGGCTTATCCGTTGC+TGG | 0.393934 | 2.1:+708005 | MS.gene071246:CDS |
GCAGATGGGACATCAAATAA+TGG | 0.395904 | 2.1:-709014 | None:intergenic |
CCTTCTGAACTCTCCTAGTC+AGG | 0.408120 | 2.1:-708098 | None:intergenic |
ACTCACAACTGCAACATTTG+TGG | 0.415751 | 2.1:+708941 | MS.gene071246:CDS |
TTATTTACCTTTCGAATTCA+GGG | 0.417761 | 2.1:+706302 | MS.gene071246:CDS |
GGCAGCAGAGTTAGAAATTG+AGG | 0.418070 | 2.1:+707990 | MS.gene071246:intron |
TATGGATGATGATGGTGATA+TGG | 0.419241 | 2.1:+708236 | MS.gene071246:CDS |
TCCCTACCAAGGATTGTTGA+TGG | 0.421053 | 2.1:-706045 | None:intergenic |
AGATGAAATAGAGCAGCTTA+TGG | 0.421927 | 2.1:+708218 | MS.gene071246:CDS |
TCCTTTGGTTCATGTCAGAA+TGG | 0.426763 | 2.1:-706233 | None:intergenic |
CAACGACGGTTGACAACAGC+TGG | 0.431418 | 2.1:+706177 | MS.gene071246:CDS |
GACAACAGCTGGGGTGGGCG+AGG | 0.437325 | 2.1:+706188 | MS.gene071246:CDS |
TGGATCCGTGTTGACACATC+TGG | 0.446625 | 2.1:+705925 | MS.gene071246:CDS |
AGCCTCCGAGAGTGAGAGTC+AGG | 0.448161 | 2.1:-708387 | None:intergenic |
AGATTTCATCAACATTCAAC+TGG | 0.455223 | 2.1:+708667 | MS.gene071246:CDS |
GAGTCAGGTGGTGATGAAAC+AGG | 0.460932 | 2.1:-708372 | None:intergenic |
ACAGCTGGGGTGGGCGAGGT+GGG | 0.461601 | 2.1:+706192 | MS.gene071246:CDS |
GCAATCTTTGGAGTGGTGGC+AGG | 0.465654 | 2.1:+708966 | MS.gene071246:CDS |
ATCAAGTAGGCGAAGATCAC+GGG | 0.467040 | 2.1:-706007 | None:intergenic |
TTGTGAGTAAAAGCTCAAAC+TGG | 0.470435 | 2.1:-708926 | None:intergenic |
AACAGCTGGGGTGGGCGAGG+TGG | 0.471121 | 2.1:+706191 | MS.gene071246:CDS |
TGAACCAAAGGAGAGGCAAT+AGG | 0.472243 | 2.1:+706244 | MS.gene071246:CDS |
GTCTACCCATCAACAATCCT+TGG | 0.472976 | 2.1:+706039 | MS.gene071246:CDS |
ATTGCAATACATATTTATCA+AGG | 0.473828 | 2.1:-706140 | None:intergenic |
CAGGGCTCTTGAAGTTGCCC+TGG | 0.477339 | 2.1:+706320 | MS.gene071246:CDS |
AACAATCCTTGGTAGGGAAA+AGG | 0.485245 | 2.1:+706050 | MS.gene071246:CDS |
CTTACGTTAAAAGCGGATGC+AGG | 0.495617 | 2.1:-705808 | None:intergenic |
TTGTAAATCTCGAGCAGATA+CGG | 0.500267 | 2.1:+706079 | MS.gene071246:CDS |
GAAATGTGCATGCAGCCTCC+AGG | 0.500840 | 2.1:-706338 | None:intergenic |
TATGGAGATCAGTCTATGGT+TGG | 0.502971 | 2.1:+708306 | MS.gene071246:CDS |
GGTGATGAAACAGGAGAGAC+TGG | 0.503084 | 2.1:-708363 | None:intergenic |
GAGATGGATGCACCATCAAC+CGG | 0.513341 | 2.1:-708336 | None:intergenic |
AGAAGAGCTTGAGCATTGCT+AGG | 0.517888 | 2.1:+708412 | MS.gene071246:CDS |
CTCCATAATGGCGGATCTCA+AGG | 0.518229 | 2.1:+705765 | None:intergenic |
GGCTCTTGAAGTTGCCCTGG+AGG | 0.521464 | 2.1:+706323 | MS.gene071246:CDS |
CCCTACCAAGGATTGTTGAT+GGG | 0.521728 | 2.1:-706044 | None:intergenic |
ATGTCCCATCTGCATTTCAG+TGG | 0.522155 | 2.1:+709024 | MS.gene071246:CDS |
ACGGTTGACAACAGCTGGGG+TGG | 0.531980 | 2.1:+706182 | MS.gene071246:CDS |
ATTCGAAAGGTAAATAATCA+GGG | 0.532696 | 2.1:-706296 | None:intergenic |
GTTGGATATAGACCGGTTGA+TGG | 0.535505 | 2.1:+708324 | MS.gene071246:CDS |
GTCTATGGTTGGATATAGAC+CGG | 0.535718 | 2.1:+708317 | MS.gene071246:CDS |
TGTGGTTCTTCAAGTACAGA+AGG | 0.542985 | 2.1:+709096 | MS.gene071246:CDS |
TGACACATCTGGAAACTCTC+AGG | 0.543785 | 2.1:+705936 | MS.gene071246:CDS |
TGTCCCATCTGCATTTCAGT+GGG | 0.554672 | 2.1:+709025 | MS.gene071246:CDS |
CTTATAATAACAGGAGTTTG+CGG | 0.555411 | 2.1:+709050 | MS.gene071246:CDS |
CACCACCTGACTCTCACTCT+CGG | 0.557224 | 2.1:+708382 | MS.gene071246:CDS |
GAGGTCAAGAAGCGAGGCCA+AGG | 0.561541 | 2.1:+705892 | MS.gene071246:CDS |
GATCAAGTAGGCGAAGATCA+CGG | 0.562420 | 2.1:-706008 | None:intergenic |
AGGAGAGACTGGAAGAGAGA+TGG | 0.565175 | 2.1:-708352 | None:intergenic |
CCCATCAACAATCCTTGGTA+GGG | 0.567511 | 2.1:+706044 | MS.gene071246:CDS |
GAGGCTTATCCGTTGCTGGA+TGG | 0.568522 | 2.1:+708009 | MS.gene071246:CDS |
TTGCAATACATATTTATCAA+GGG | 0.575605 | 2.1:-706139 | None:intergenic |
GGAGTCGACACGAGAGCATG+AGG | 0.579329 | 2.1:+708433 | MS.gene071246:CDS |
GGTTGCAATCTTTGGAGTGG+TGG | 0.579624 | 2.1:+708962 | MS.gene071246:CDS |
GTAGACTTGTTGCCCTGACT+AGG | 0.581008 | 2.1:+708085 | MS.gene071246:CDS |
TCAAGGAGTGGACGTTGTCG+AGG | 0.581652 | 2.1:+705873 | MS.gene071246:CDS |
TGGAAACTCTCAGGTCATTG+AGG | 0.582420 | 2.1:+705945 | MS.gene071246:CDS |
TTGAAAAGCTTGCCTTCCAG+AGG | 0.584149 | 2.1:-705854 | None:intergenic |
GTTGGTGTAGCTTCTTATAG+GGG | 0.584463 | 2.1:-709125 | None:intergenic |
AGGACCCACTGAAATGCAGA+TGG | 0.588506 | 2.1:-709029 | None:intergenic |
ACCCATCAACAATCCTTGGT+AGG | 0.588545 | 2.1:+706043 | MS.gene071246:CDS |
TACCGAGAAGAAAAGACGAA+TGG | 0.590299 | 2.1:+708272 | MS.gene071246:CDS |
ATCGACCAACGGCCTCTGGA+AGG | 0.591846 | 2.1:+705842 | MS.gene071246:CDS |
AAATGTGCATGCAGCCTCCA+GGG | 0.592181 | 2.1:-706337 | None:intergenic |
GCTTGCCTTCCAGAGGCCGT+TGG | 0.593665 | 2.1:-705847 | None:intergenic |
TGTGGTTGCAATCTTTGGAG+TGG | 0.599940 | 2.1:+708959 | MS.gene071246:CDS |
CCTGACTAGGAGAGTTCAGA+AGG | 0.604184 | 2.1:+708098 | MS.gene071246:CDS |
GTGTATTATTACAGCAGATG+AGG | 0.604721 | 2.1:+706101 | MS.gene071246:CDS |
ACCCTCTCTTACGTTAAAAG+CGG | 0.608315 | 2.1:-705815 | None:intergenic |
CGGTTGACAACAGCTGGGGT+GGG | 0.611309 | 2.1:+706183 | MS.gene071246:CDS |
AGTAGGCGAAGATCACGGGC+AGG | 0.615154 | 2.1:-706003 | None:intergenic |
GGATCCACGATTTAAGACCT+TGG | 0.615463 | 2.1:-705909 | None:intergenic |
AACGACGGTTGACAACAGCT+GGG | 0.618774 | 2.1:+706178 | MS.gene071246:CDS |
ACCATTCTGACATGAACCAA+AGG | 0.623235 | 2.1:+706232 | MS.gene071246:CDS |
TCAAGAGCCCTGAATTCGAA+AGG | 0.625788 | 2.1:-706309 | None:intergenic |
ATGTGATTGATCTTCAACGA+CGG | 0.626824 | 2.1:+706163 | MS.gene071246:CDS |
GAGCAGCTTATGGATGATGA+TGG | 0.627314 | 2.1:+708228 | MS.gene071246:CDS |
ATGCACATTTCTTGACACCC+AGG | 0.632838 | 2.1:+706350 | MS.gene071246:CDS |
AGACAAACACAGGATCAAGT+AGG | 0.642570 | 2.1:-706020 | None:intergenic |
CACTCTAAACAAGTTGACAT+CGG | 0.643907 | 2.1:+708530 | MS.gene071246:CDS |
CTTCTGAACTCTCCTAGTCA+GGG | 0.644832 | 2.1:-708097 | None:intergenic |
TTCGAAAGGTAAATAATCAG+GGG | 0.653361 | 2.1:-706295 | None:intergenic |
GATGTCAGTCCATCCAGCAA+CGG | 0.656707 | 2.1:-708018 | None:intergenic |
GAGGCCAAGGTCTTAAATCG+TGG | 0.657526 | 2.1:+705905 | MS.gene071246:CDS |
GTTGTCGAGGTCAAGAAGCG+AGG | 0.667662 | 2.1:+705886 | MS.gene071246:CDS |
CTCCGAGAGTGAGAGTCAGG+TGG | 0.667939 | 2.1:-708384 | None:intergenic |
AGAGGGTATCAATCGACCAA+CGG | 0.670365 | 2.1:+705831 | MS.gene071246:CDS |
GTTGATGGGTAGACAAACAC+AGG | 0.672622 | 2.1:-706030 | None:intergenic |
CACGGGCAGGAAGATCGCAA+CGG | 0.672945 | 2.1:-705990 | None:intergenic |
TATTATTACAGGATAATGTG+CGG | 0.676578 | 2.1:+708892 | MS.gene071246:intron |
GGACCCACTGAAATGCAGAT+GGG | 0.678111 | 2.1:-709028 | None:intergenic |
AGTTTCCAGATGTGTCAACA+CGG | 0.680366 | 2.1:-705930 | None:intergenic |
TAATGGCGGATCTCAAGGAG+CGG | 0.682101 | 2.1:+705770 | None:intergenic |
TCTGACATGAACCAAAGGAG+AGG | 0.687908 | 2.1:+706237 | MS.gene071246:CDS |
CACCTGACTCTCACTCTCGG+AGG | 0.701741 | 2.1:+708385 | MS.gene071246:CDS |
ACGACGGTTGACAACAGCTG+GGG | 0.707887 | 2.1:+706179 | MS.gene071246:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGTTATATTATACATTAT+AGG | - | chr2.1:707466-707485 | None:intergenic | 10.0% |
!!! | TTTTATGTATAATATAATGT+AGG | + | chr2.1:707311-707330 | MS.gene071246:intron | 10.0% |
!! | AATGTATAATATAACTTATG+TGG | + | chr2.1:707468-707487 | MS.gene071246:intron | 15.0% |
!! | ACAAAAAATACATAGAAAAA+AGG | + | chr2.1:707549-707568 | MS.gene071246:intron | 15.0% |
!! | ATATAAGTTTGATATACAAA+AGG | - | chr2.1:707098-707117 | None:intergenic | 15.0% |
!! | ATTTAATTGGAACAAATTAA+AGG | + | chr2.1:707362-707381 | MS.gene071246:intron | 15.0% |
!! | GTTACAATTAAATAACTTAA+AGG | + | chr2.1:707422-707441 | MS.gene071246:intron | 15.0% |
!! | GTTATTTAATTGTAACAAAT+TGG | - | chr2.1:707418-707437 | None:intergenic | 15.0% |
!! | TTCATTTATATAGAAAAAGA+AGG | + | chr2.1:707795-707814 | MS.gene071246:intron | 15.0% |
!!! | GATGTATATTAAATTTTGTT+TGG | + | chr2.1:706608-706627 | MS.gene071246:intron | 15.0% |
!!! | TTCTTTTTCTATATAAATGA+AGG | - | chr2.1:707796-707815 | None:intergenic | 15.0% |
!! | AAACTCAAGATCAAATAAAT+GGG | - | chr2.1:707052-707071 | None:intergenic | 20.0% |
!! | ACTAATAACCAAAATACAAT+AGG | - | chr2.1:708741-708760 | None:intergenic | 20.0% |
!! | ATTGCAATACATATTTATCA+AGG | - | chr2.1:706143-706162 | None:intergenic | 20.0% |
!! | CAAGTTCATAATTAAATCAA+AGG | + | chr2.1:706379-706398 | MS.gene071246:intron | 20.0% |
!! | TACAATGTATGTATTATTAC+AGG | + | chr2.1:708881-708900 | MS.gene071246:intron | 20.0% |
!! | TCTTCATATTATTGTTCATT+TGG | + | chr2.1:707923-707942 | MS.gene071246:intron | 20.0% |
!! | TGTTCCAATTAAATAACTTT+AGG | - | chr2.1:707356-707375 | None:intergenic | 20.0% |
!! | TTGCAATACATATTTATCAA+GGG | - | chr2.1:706142-706161 | None:intergenic | 20.0% |
!! | TTTCTATAGAATTGTTTACA+TGG | + | chr2.1:706494-706513 | MS.gene071246:intron | 20.0% |
!!! | TCTATAGAAATACAAGATTT+TGG | - | chr2.1:706484-706503 | None:intergenic | 20.0% |
!!! | TTTTAACTGAAACAAGAAAA+TGG | - | chr2.1:708627-708646 | None:intergenic | 20.0% |
! | AAATACAATAGGATAACCTT+TGG | - | chr2.1:708730-708749 | None:intergenic | 25.0% |
! | AATTCGAAAGGTAAATAATC+AGG | - | chr2.1:706300-706319 | None:intergenic | 25.0% |
! | AGCAATTAACAATTTAACAG+TGG | + | chr2.1:707645-707664 | MS.gene071246:intron | 25.0% |
! | AGTTAATATAGATAACAGTG+TGG | - | chr2.1:708563-708582 | None:intergenic | 25.0% |
! | AGTTGAAAATGACAATTGAT+AGG | + | chr2.1:708153-708172 | MS.gene071246:intron | 25.0% |
! | ATTATTTACCTTTCGAATTC+AGG | + | chr2.1:706301-706320 | MS.gene071246:CDS | 25.0% |
! | ATTCGAAAGGTAAATAATCA+GGG | - | chr2.1:706299-706318 | None:intergenic | 25.0% |
! | CAAACTCAAGATCAAATAAA+TGG | - | chr2.1:707053-707072 | None:intergenic | 25.0% |
! | GGTTCCTAAAGTTATTTAAT+TGG | + | chr2.1:707349-707368 | MS.gene071246:intron | 25.0% |
! | GTTAATATAGATAACAGTGT+GGG | - | chr2.1:708562-708581 | None:intergenic | 25.0% |
! | TAAAGTAAGTCAAGAATGAA+AGG | - | chr2.1:706437-706456 | None:intergenic | 25.0% |
! | TAAATAACTTAAAGGACCTA+TGG | + | chr2.1:707430-707449 | MS.gene071246:intron | 25.0% |
! | TATTATTACAGGATAATGTG+CGG | + | chr2.1:708892-708911 | MS.gene071246:intron | 25.0% |
! | TCTATTTATCACTAACTTCT+AGG | - | chr2.1:707528-707547 | None:intergenic | 25.0% |
! | TGGTACGAAAAAAACTTAAA+GGG | + | chr2.1:707392-707411 | MS.gene071246:intron | 25.0% |
! | TTATTTACCTTTCGAATTCA+GGG | + | chr2.1:706302-706321 | MS.gene071246:CDS | 25.0% |
! | TTCTCTATTCTATTTGCAAA+AGG | + | chr2.1:707969-707988 | MS.gene071246:intron | 25.0% |
! | TTGTAAAACATGTGAATATG+AGG | - | chr2.1:707205-707224 | None:intergenic | 25.0% |
! | TTTATATAGAAAAAGAAGGC+CGG | + | chr2.1:707799-707818 | MS.gene071246:intron | 25.0% |
!! | AAGGTTATCCTATTGTATTT+TGG | + | chr2.1:708730-708749 | MS.gene071246:intron | 25.0% |
!! | AATCAAAGGCTATATTCTTT+TGG | + | chr2.1:706393-706412 | MS.gene071246:intron | 25.0% |
!! | ATATAACTTATGTGGTTTGT+TGG | + | chr2.1:707476-707495 | MS.gene071246:intron | 25.0% |
!!! | GGGAAGTATTATCATATTTA+AGG | + | chr2.1:706543-706562 | MS.gene071246:intron | 25.0% |
AAACGGTGATAGATAAATTG+CGG | - | chr2.1:708604-708623 | None:intergenic | 30.0% | |
AACAAATTAAAGGATGCAAG+TGG | + | chr2.1:707372-707391 | MS.gene071246:intron | 30.0% | |
AATTTCTTTCCATCATACCA+TGG | - | chr2.1:707748-707767 | None:intergenic | 30.0% | |
AGATTTCATCAACATTCAAC+TGG | + | chr2.1:708667-708686 | MS.gene071246:CDS | 30.0% | |
ATACTAATCAAGCAAGCATA+TGG | - | chr2.1:707898-707917 | None:intergenic | 30.0% | |
ATATACTTACCATGGTATGA+TGG | + | chr2.1:707736-707755 | MS.gene071246:intron | 30.0% | |
ATTATGAACTTGTACTAACC+TGG | - | chr2.1:706371-706390 | None:intergenic | 30.0% | |
CAAATCACAAATGAACTTGT+AGG | + | chr2.1:706567-706586 | MS.gene071246:intron | 30.0% | |
CAATATTAGCTCAGCAAATA+TGG | - | chr2.1:708181-708200 | None:intergenic | 30.0% | |
CATATTTATCAAGGGAATTC+AGG | - | chr2.1:706134-706153 | None:intergenic | 30.0% | |
CTGAAACAAGAAAATGGAAA+CGG | - | chr2.1:708621-708640 | None:intergenic | 30.0% | |
CTTATAATAACAGGAGTTTG+CGG | + | chr2.1:709050-709069 | MS.gene071246:CDS | 30.0% | |
GAAGATCAGTACTCTAAATT+TGG | + | chr2.1:708041-708060 | MS.gene071246:CDS | 30.0% | |
GTGGTACGAAAAAAACTTAA+AGG | + | chr2.1:707391-707410 | MS.gene071246:intron | 30.0% | |
TAATGCAGTTACTCTAATAC+TGG | - | chr2.1:706655-706674 | None:intergenic | 30.0% | |
TATAGGCTAAATTACACCAT+AGG | - | chr2.1:707449-707468 | None:intergenic | 30.0% | |
TGTTTATTCTGGTGAAATGT+AGG | + | chr2.1:707618-707637 | MS.gene071246:intron | 30.0% | |
TTATATAGAAAAAGAAGGCC+GGG | + | chr2.1:707800-707819 | MS.gene071246:intron | 30.0% | |
TTATATCAAGGAACTCTGAT+TGG | + | chr2.1:706797-706816 | MS.gene071246:intron | 30.0% | |
TTATGAACTTGTACTAACCT+GGG | - | chr2.1:706370-706389 | None:intergenic | 30.0% | |
TTCGAAAGGTAAATAATCAG+GGG | - | chr2.1:706298-706317 | None:intergenic | 30.0% | |
TTTCTCATATTAGTCACCAA+AGG | + | chr2.1:708711-708730 | MS.gene071246:intron | 30.0% | |
! | AGAAGGTGATGTTCATTTTA+TGG | + | chr2.1:708115-708134 | MS.gene071246:intron | 30.0% |
! | ATGGTATGATGGAAAGAAAT+TGG | + | chr2.1:707747-707766 | MS.gene071246:intron | 30.0% |
! | ATTTTATGGAGATCAGTCTA+TGG | + | chr2.1:708302-708321 | MS.gene071246:CDS | 30.0% |
! | CACATGTTTTACAAAGCAAT+GGG | + | chr2.1:707211-707230 | MS.gene071246:intron | 30.0% |
! | GTATATTTTCTGCATTTGTG+TGG | + | chr2.1:709078-709097 | MS.gene071246:CDS | 30.0% |
! | TATTTGCTGAGCTAATATTG+TGG | + | chr2.1:708181-708200 | MS.gene071246:intron | 30.0% |
! | TCACATGTTTTACAAAGCAA+TGG | + | chr2.1:707210-707229 | MS.gene071246:intron | 30.0% |
!! | CTCTAGAATGGTTTCTTTAT+AGG | + | chr2.1:707161-707180 | MS.gene071246:intron | 30.0% |
!! | CTTACTTTAGAACAGAGAAA+TGG | + | chr2.1:706448-706467 | MS.gene071246:intron | 30.0% |
!! | TCATCTACTTTTCTTGTCAT+TGG | + | chr2.1:707124-707143 | MS.gene071246:intron | 30.0% |
!! | TCTACTTGCTATGTTTATTC+TGG | + | chr2.1:707607-707626 | MS.gene071246:intron | 30.0% |
!!! | CGAATGGAATTGTCATTTTA+TGG | + | chr2.1:708288-708307 | MS.gene071246:CDS | 30.0% |
AAACATGTGAATATGAGGTG+TGG | - | chr2.1:707200-707219 | None:intergenic | 35.0% | |
AATAAATGGGTAACTGCACT+TGG | - | chr2.1:707039-707058 | None:intergenic | 35.0% | |
ACATTTGTGGTTGCAATCTT+TGG | + | chr2.1:708954-708973 | MS.gene071246:CDS | 35.0% | |
AGATGAAATAGAGCAGCTTA+TGG | + | chr2.1:708218-708237 | MS.gene071246:CDS | 35.0% | |
AGTACTAGTTGTGAATCTTG+TGG | - | chr2.1:707260-707279 | None:intergenic | 35.0% | |
ATAAATGGGTAACTGCACTT+GGG | - | chr2.1:707038-707057 | None:intergenic | 35.0% | |
ATGTGATTGATCTTCAACGA+CGG | + | chr2.1:706163-706182 | MS.gene071246:CDS | 35.0% | |
CATACAGACAACGCATAATT+GGG | + | chr2.1:708804-708823 | MS.gene071246:intron | 35.0% | |
CGCAAACTCCTGTTATTATA+AGG | - | chr2.1:709052-709071 | None:intergenic | 35.0% | |
GAGACAAGCACTTTATATCA+AGG | + | chr2.1:706785-706804 | MS.gene071246:intron | 35.0% | |
GCAACAGAATATTCTAGACT+CGG | - | chr2.1:706943-706962 | None:intergenic | 35.0% | |
GGTGACTAATATGAGAAAGA+AGG | - | chr2.1:708709-708728 | None:intergenic | 35.0% | |
GTGTATTATTACAGCAGATG+AGG | + | chr2.1:706101-706120 | MS.gene071246:CDS | 35.0% | |
TAGATAAATTGCGGTGAAGT+TGG | - | chr2.1:708595-708614 | None:intergenic | 35.0% | |
TCATACAGACAACGCATAAT+TGG | + | chr2.1:708803-708822 | MS.gene071246:intron | 35.0% | |
TGAGTTTCTGCATGCAATAT+GGG | + | chr2.1:706523-706542 | MS.gene071246:intron | 35.0% | |
TGGAGGATATATACTTACCA+TGG | + | chr2.1:707728-707747 | MS.gene071246:intron | 35.0% | |
TGGTAAGTATATATCCTCCA+TGG | - | chr2.1:707728-707747 | None:intergenic | 35.0% | |
TGTAGGCTAAATTACACTAG+AGG | + | chr2.1:707328-707347 | MS.gene071246:intron | 35.0% | |
TTAGAGAAAGCCAGTATGTA+TGG | + | chr2.1:706969-706988 | MS.gene071246:intron | 35.0% | |
TTGAGTTTCTGCATGCAATA+TGG | + | chr2.1:706522-706541 | MS.gene071246:intron | 35.0% | |
TTGTAAATCTCGAGCAGATA+CGG | + | chr2.1:706079-706098 | MS.gene071246:CDS | 35.0% | |
TTGTGAGTAAAAGCTCAAAC+TGG | - | chr2.1:708929-708948 | None:intergenic | 35.0% | |
! | CACTCTAAACAAGTTGACAT+CGG | + | chr2.1:708530-708549 | MS.gene071246:CDS | 35.0% |
! | GAGTCTAGAATATTCTGTTG+CGG | + | chr2.1:706942-706961 | MS.gene071246:intron | 35.0% |
! | TCTTTTTGTGCCATACATAC+TGG | - | chr2.1:706982-707001 | None:intergenic | 35.0% |
! | TGTTGGTGGAAAAATTCACT+AGG | + | chr2.1:707493-707512 | MS.gene071246:intron | 35.0% |
! | TTCCATTCGTCTTTTCTTCT+CGG | - | chr2.1:708277-708296 | None:intergenic | 35.0% |
!! | TAACTTATGTGGTTTGTTGG+TGG | + | chr2.1:707479-707498 | MS.gene071246:intron | 35.0% |
!! | TATGGATGATGATGGTGATA+TGG | + | chr2.1:708236-708255 | MS.gene071246:CDS | 35.0% |
!! | TCTACTTTTCTTGTCATTGG+TGG | + | chr2.1:707127-707146 | MS.gene071246:intron | 35.0% |
AACAATCCTTGGTAGGGAAA+AGG | + | chr2.1:706050-706069 | MS.gene071246:CDS | 40.0% | |
AATTCCTATTGCCTCTCCTT+TGG | - | chr2.1:706251-706270 | None:intergenic | 40.0% | |
ACCATTCTGACATGAACCAA+AGG | + | chr2.1:706232-706251 | MS.gene071246:CDS | 40.0% | |
ACCCTCTCTTACGTTAAAAG+CGG | - | chr2.1:705818-705837 | None:intergenic | 40.0% | |
ACTCACAACTGCAACATTTG+TGG | + | chr2.1:708941-708960 | MS.gene071246:CDS | 40.0% | |
AGACAAACACAGGATCAAGT+AGG | - | chr2.1:706023-706042 | None:intergenic | 40.0% | |
AGTTTCCAGATGTGTCAACA+CGG | - | chr2.1:705933-705952 | None:intergenic | 40.0% | |
CAGTGGGTCCTTATAATAAC+AGG | + | chr2.1:709041-709060 | MS.gene071246:CDS | 40.0% | |
GCAGATGGGACATCAAATAA+TGG | - | chr2.1:709017-709036 | None:intergenic | 40.0% | |
GCAGTCTGTAACTGTCTAAA+AGG | - | chr2.1:706748-706767 | None:intergenic | 40.0% | |
GCATTCTGTTACCACAAAAG+AGG | - | chr2.1:706921-706940 | None:intergenic | 40.0% | |
GCTAATATTGTGGATGTGTC+AGG | + | chr2.1:708191-708210 | MS.gene071246:intron | 40.0% | |
GTCTATGGTTGGATATAGAC+CGG | + | chr2.1:708317-708336 | MS.gene071246:CDS | 40.0% | |
GTTACCACAAAAGAGGTTTC+TGG | - | chr2.1:706914-706933 | None:intergenic | 40.0% | |
GTTGTCTGTATGAGTATGTG+TGG | - | chr2.1:708796-708815 | None:intergenic | 40.0% | |
TAAATGGGTAACTGCACTTG+GGG | - | chr2.1:707037-707056 | None:intergenic | 40.0% | |
TACAGACTGCTTTCTGTTCA+CGG | + | chr2.1:706758-706777 | MS.gene071246:intron | 40.0% | |
TACCGAGAAGAAAAGACGAA+TGG | + | chr2.1:708272-708291 | MS.gene071246:CDS | 40.0% | |
TATGGAGATCAGTCTATGGT+TGG | + | chr2.1:708306-708325 | MS.gene071246:CDS | 40.0% | |
TCTCTGGCATCAAATCAACT+TGG | - | chr2.1:707699-707718 | None:intergenic | 40.0% | |
TGTGGTTCTTCAAGTACAGA+AGG | + | chr2.1:709096-709115 | MS.gene071246:CDS | 40.0% | |
TTGAAATCATCCCAAGCAAC+AGG | - | chr2.1:707291-707310 | None:intergenic | 40.0% | |
TTTCACAGGATTTCTTGTCC+CGG | - | chr2.1:707821-707840 | None:intergenic | 40.0% | |
! | ATAGCCAGAAACCTCTTTTG+TGG | + | chr2.1:706907-706926 | MS.gene071246:intron | 40.0% |
! | GCACATCAACACATTTTCAC+AGG | - | chr2.1:707835-707854 | None:intergenic | 40.0% |
! | TCCTTTGGTTCATGTCAGAA+TGG | - | chr2.1:706236-706255 | None:intergenic | 40.0% |
! | TTAAAAGCGGATGCAGGTTT+TGG | - | chr2.1:705805-705824 | None:intergenic | 40.0% |
! | TTCGTCTTTTCTTCTCGGTA+AGG | - | chr2.1:708272-708291 | None:intergenic | 40.0% |
!! | ATCCGCTTTTAACGTAAGAG+AGG | + | chr2.1:705813-705832 | MS.gene071246:CDS | 40.0% |
!! | TCCGCTTTTAACGTAAGAGA+GGG | + | chr2.1:705814-705833 | MS.gene071246:CDS | 40.0% |
AAATTCCGTGAGAGATGCAC+AGG | - | chr2.1:707588-707607 | None:intergenic | 45.0% | |
AATTGAGGCTTATCCGTTGC+TGG | + | chr2.1:708005-708024 | MS.gene071246:CDS | 45.0% | |
ACAGACAACGCATAATTGGG+AGG | + | chr2.1:708807-708826 | MS.gene071246:intron | 45.0% | |
ACCCATCAACAATCCTTGGT+AGG | + | chr2.1:706043-706062 | MS.gene071246:CDS | 45.0% | |
ACTATTCTGTGCCTGTTGCT+TGG | + | chr2.1:707277-707296 | MS.gene071246:intron | 45.0% | |
AGACAACGCATAATTGGGAG+GGG | + | chr2.1:708809-708828 | MS.gene071246:intron | 45.0% | |
ATCAAGTAGGCGAAGATCAC+GGG | - | chr2.1:706010-706029 | None:intergenic | 45.0% | |
ATGCACATTTCTTGACACCC+AGG | + | chr2.1:706350-706369 | MS.gene071246:CDS | 45.0% | |
ATGTCCCATCTGCATTTCAG+TGG | + | chr2.1:709024-709043 | MS.gene071246:CDS | 45.0% | |
CAGACAACGCATAATTGGGA+GGG | + | chr2.1:708808-708827 | MS.gene071246:intron | 45.0% | |
CCCATCAACAATCCTTGGTA+GGG | + | chr2.1:706044-706063 | MS.gene071246:CDS | 45.0% | |
CCCTACCAAGGATTGTTGAT+GGG | - | chr2.1:706047-706066 | None:intergenic | 45.0% | |
CTTACGTTAAAAGCGGATGC+AGG | - | chr2.1:705811-705830 | None:intergenic | 45.0% | |
CTTCTGAACTCTCCTAGTCA+GGG | - | chr2.1:708100-708119 | None:intergenic | 45.0% | |
GAGCAGCTTATGGATGATGA+TGG | + | chr2.1:708228-708247 | MS.gene071246:CDS | 45.0% | |
GAGTGGTGGCAGGAATATTT+GGG | + | chr2.1:708976-708995 | MS.gene071246:CDS | 45.0% | |
GATCAAGTAGGCGAAGATCA+CGG | - | chr2.1:706011-706030 | None:intergenic | 45.0% | |
GGCAGCAGAGTTAGAAATTG+AGG | + | chr2.1:707990-708009 | MS.gene071246:intron | 45.0% | |
GTCTACCCATCAACAATCCT+TGG | + | chr2.1:706039-706058 | MS.gene071246:CDS | 45.0% | |
GTTGGATATAGACCGGTTGA+TGG | + | chr2.1:708324-708343 | MS.gene071246:CDS | 45.0% | |
TCAAGAGCCCTGAATTCGAA+AGG | - | chr2.1:706312-706331 | None:intergenic | 45.0% | |
TCCCTACCAAGGATTGTTGA+TGG | - | chr2.1:706048-706067 | None:intergenic | 45.0% | |
TCTGACATGAACCAAAGGAG+AGG | + | chr2.1:706237-706256 | MS.gene071246:CDS | 45.0% | |
TGAACCAAAGGAGAGGCAAT+AGG | + | chr2.1:706244-706263 | MS.gene071246:CDS | 45.0% | |
TGACACATCTGGAAACTCTC+AGG | + | chr2.1:705936-705955 | MS.gene071246:CDS | 45.0% | |
TGGAAACTCTCAGGTCATTG+AGG | + | chr2.1:705945-705964 | MS.gene071246:CDS | 45.0% | |
TGTCCCATCTGCATTTCAGT+GGG | + | chr2.1:709025-709044 | MS.gene071246:CDS | 45.0% | |
TTGAAAAGCTTGCCTTCCAG+AGG | - | chr2.1:705857-705876 | None:intergenic | 45.0% | |
! | AGAAGAGCTTGAGCATTGCT+AGG | + | chr2.1:708412-708431 | MS.gene071246:CDS | 45.0% |
! | CAATAGCCTTTTCCCTACCA+AGG | - | chr2.1:706059-706078 | None:intergenic | 45.0% |
! | CTAATACTGGCCTCAATCAG+TGG | - | chr2.1:706642-706661 | None:intergenic | 45.0% |
! | CTATTCTGTGCCTGTTGCTT+GGG | + | chr2.1:707278-707297 | MS.gene071246:intron | 45.0% |
! | GGATCCACGATTTAAGACCT+TGG | - | chr2.1:705912-705931 | None:intergenic | 45.0% |
! | GTTGATGGGTAGACAAACAC+AGG | - | chr2.1:706033-706052 | None:intergenic | 45.0% |
! | TCTGGAAGGCAAGCTTTTCA+AGG | + | chr2.1:705856-705875 | MS.gene071246:CDS | 45.0% |
! | TGTGGTTGCAATCTTTGGAG+TGG | + | chr2.1:708959-708978 | MS.gene071246:CDS | 45.0% |
!! | AAGGCAAGCTTTTCAAGGAG+TGG | + | chr2.1:705861-705880 | MS.gene071246:CDS | 45.0% |
!! | ACCATTCTAGAGTGCGAAAC+AGG | - | chr2.1:707153-707172 | None:intergenic | 45.0% |
!! | AGAGGGTATCAATCGACCAA+CGG | + | chr2.1:705831-705850 | MS.gene071246:CDS | 45.0% |
AAATGTGCATGCAGCCTCCA+GGG | - | chr2.1:706340-706359 | None:intergenic | 50.0% | |
AACGACGGTTGACAACAGCT+GGG | + | chr2.1:706178-706197 | MS.gene071246:CDS | 50.0% | |
AACGAGAACCGAGAAGAGCT+AGG | - | chr2.1:706864-706883 | None:intergenic | 50.0% | |
ACGAGAACCGAGAAGAGCTA+GGG | - | chr2.1:706863-706882 | None:intergenic | 50.0% | |
ACTGCTTTCTGTTCACGGTC+AGG | + | chr2.1:706763-706782 | MS.gene071246:intron | 50.0% | |
AGGACCCACTGAAATGCAGA+TGG | - | chr2.1:709032-709051 | None:intergenic | 50.0% | |
AGGAGAGACTGGAAGAGAGA+TGG | - | chr2.1:708355-708374 | None:intergenic | 50.0% | |
CCTGACTAGGAGAGTTCAGA+AGG | + | chr2.1:708098-708117 | MS.gene071246:CDS | 50.0% | |
CCTTCTGAACTCTCCTAGTC+AGG | - | chr2.1:708101-708120 | None:intergenic | 50.0% | |
CGAGAAGAGCTAGGGAGAAA+GGG | - | chr2.1:706855-706874 | None:intergenic | 50.0% | |
GACAACGCATAATTGGGAGG+GGG | + | chr2.1:708810-708829 | MS.gene071246:intron | 50.0% | |
GAGATGGATGCACCATCAAC+CGG | - | chr2.1:708339-708358 | None:intergenic | 50.0% | |
GAGGCCAAGGTCTTAAATCG+TGG | + | chr2.1:705905-705924 | MS.gene071246:CDS | 50.0% | |
GATGTCAGTCCATCCAGCAA+CGG | - | chr2.1:708021-708040 | None:intergenic | 50.0% | |
GGACCCACTGAAATGCAGAT+GGG | - | chr2.1:709031-709050 | None:intergenic | 50.0% | |
GGAGTGGTGGCAGGAATATT+TGG | + | chr2.1:708975-708994 | MS.gene071246:CDS | 50.0% | |
GGTGATGAAACAGGAGAGAC+TGG | - | chr2.1:708366-708385 | None:intergenic | 50.0% | |
GTGAACCTGTGCATCTCTCA+CGG | + | chr2.1:707580-707599 | MS.gene071246:intron | 50.0% | |
! | CCTTTCTCCCTAGCTCTTCT+CGG | + | chr2.1:706853-706872 | MS.gene071246:intron | 50.0% |
! | GAGTCAGGTGGTGATGAAAC+AGG | - | chr2.1:708375-708394 | None:intergenic | 50.0% |
! | GCCTGTTTCGCACTCTAGAA+TGG | + | chr2.1:707149-707168 | MS.gene071246:intron | 50.0% |
! | GGATCTGTGTCCACTGATTG+AGG | + | chr2.1:706629-706648 | MS.gene071246:intron | 50.0% |
! | TGGATCCGTGTTGACACATC+TGG | + | chr2.1:705925-705944 | MS.gene071246:CDS | 50.0% |
!! | AAAGCGGATGCAGGTTTTGG+TGG | - | chr2.1:705802-705821 | None:intergenic | 50.0% |
!! | AAGCGGATGCAGGTTTTGGT+GGG | - | chr2.1:705801-705820 | None:intergenic | 50.0% |
!! | GGTTGCAATCTTTGGAGTGG+TGG | + | chr2.1:708962-708981 | MS.gene071246:CDS | 50.0% |
!! | GTAGACTTGTTGCCCTGACT+AGG | + | chr2.1:708085-708104 | MS.gene071246:CDS | 50.0% |
AACGCATAATTGGGAGGGGG+AGG | + | chr2.1:708813-708832 | MS.gene071246:intron | 55.0% | |
ACGACGGTTGACAACAGCTG+GGG | + | chr2.1:706179-706198 | MS.gene071246:CDS | 55.0% | |
ACGCATAATTGGGAGGGGGA+GGG | + | chr2.1:708814-708833 | MS.gene071246:intron | 55.0% | |
ATCAATCGACCAACGGCCTC+TGG | + | chr2.1:705838-705857 | MS.gene071246:CDS | 55.0% | |
CAACGACGGTTGACAACAGC+TGG | + | chr2.1:706177-706196 | MS.gene071246:CDS | 55.0% | |
CACCACCTGACTCTCACTCT+CGG | + | chr2.1:708382-708401 | MS.gene071246:CDS | 55.0% | |
CCGAGAAGAGCTAGGGAGAA+AGG | - | chr2.1:706856-706875 | None:intergenic | 55.0% | |
GAAATGTGCATGCAGCCTCC+AGG | - | chr2.1:706341-706360 | None:intergenic | 55.0% | |
GAGGCTTATCCGTTGCTGGA+TGG | + | chr2.1:708009-708028 | MS.gene071246:CDS | 55.0% | |
GATGCCAGAGACATCGACCA+TGG | + | chr2.1:707708-707727 | MS.gene071246:intron | 55.0% | |
GGGTAACTGCACTTGGGGAT+GGG | - | chr2.1:707032-707051 | None:intergenic | 55.0% | |
GTTGTCGAGGTCAAGAAGCG+AGG | + | chr2.1:705886-705905 | MS.gene071246:CDS | 55.0% | |
TCAAGGAGTGGACGTTGTCG+AGG | + | chr2.1:705873-705892 | MS.gene071246:CDS | 55.0% | |
TCCTCCATGGTCGATGTCTC+TGG | - | chr2.1:707715-707734 | None:intergenic | 55.0% | |
TGGGTAACTGCACTTGGGGA+TGG | - | chr2.1:707033-707052 | None:intergenic | 55.0% | |
!! | GCAATCTTTGGAGTGGTGGC+AGG | + | chr2.1:708966-708985 | MS.gene071246:CDS | 55.0% |
ACGGTTGACAACAGCTGGGG+TGG | + | chr2.1:706182-706201 | MS.gene071246:CDS | 60.0% | |
AGCCTCCGAGAGTGAGAGTC+AGG | - | chr2.1:708390-708409 | None:intergenic | 60.0% | |
AGTAGGCGAAGATCACGGGC+AGG | - | chr2.1:706006-706025 | None:intergenic | 60.0% | |
ATCGACCAACGGCCTCTGGA+AGG | + | chr2.1:705842-705861 | MS.gene071246:CDS | 60.0% | |
CACCTGACTCTCACTCTCGG+AGG | + | chr2.1:708385-708404 | MS.gene071246:CDS | 60.0% | |
CACGGGCAGGAAGATCGCAA+CGG | - | chr2.1:705993-706012 | None:intergenic | 60.0% | |
CAGGGCTCTTGAAGTTGCCC+TGG | + | chr2.1:706320-706339 | MS.gene071246:CDS | 60.0% | |
CGGTTGACAACAGCTGGGGT+GGG | + | chr2.1:706183-706202 | MS.gene071246:CDS | 60.0% | |
CTCCGAGAGTGAGAGTCAGG+TGG | - | chr2.1:708387-708406 | None:intergenic | 60.0% | |
GAGGTCAAGAAGCGAGGCCA+AGG | + | chr2.1:705892-705911 | MS.gene071246:CDS | 60.0% | |
GCCAGAGACATCGACCATGG+AGG | + | chr2.1:707711-707730 | MS.gene071246:intron | 60.0% | |
GGCTCTTGAAGTTGCCCTGG+AGG | + | chr2.1:706323-706342 | MS.gene071246:CDS | 60.0% | |
! | GGAGTCGACACGAGAGCATG+AGG | + | chr2.1:708433-708452 | MS.gene071246:CDS | 60.0% |
GCTTGCCTTCCAGAGGCCGT+TGG | - | chr2.1:705850-705869 | None:intergenic | 65.0% | |
AACAGCTGGGGTGGGCGAGG+TGG | + | chr2.1:706191-706210 | MS.gene071246:CDS | 70.0% | |
ACAGCTGGGGTGGGCGAGGT+GGG | + | chr2.1:706192-706211 | MS.gene071246:CDS | 70.0% | |
GACAACAGCTGGGGTGGGCG+AGG | + | chr2.1:706188-706207 | MS.gene071246:CDS | 70.0% | |
TGGGCGAGGTGGGCGAGGTC+TGG | + | chr2.1:706202-706221 | MS.gene071246:CDS | 75.0% | |
! | TGGGGTGGGCGAGGTGGGCG+AGG | + | chr2.1:706197-706216 | MS.gene071246:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 705772 | 709133 | 705772 | ID=MS.gene071246 |
chr2.1 | mRNA | 705772 | 709133 | 705772 | ID=MS.gene071246.t1;Parent=MS.gene071246 |
chr2.1 | exon | 705772 | 706371 | 705772 | ID=MS.gene071246.t1.exon1;Parent=MS.gene071246.t1 |
chr2.1 | CDS | 705772 | 706371 | 705772 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
chr2.1 | exon | 707991 | 708119 | 707991 | ID=MS.gene071246.t1.exon2;Parent=MS.gene071246.t1 |
chr2.1 | CDS | 707991 | 708119 | 707991 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
chr2.1 | exon | 708213 | 708551 | 708213 | ID=MS.gene071246.t1.exon3;Parent=MS.gene071246.t1 |
chr2.1 | CDS | 708213 | 708551 | 708213 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
chr2.1 | exon | 708641 | 708688 | 708641 | ID=MS.gene071246.t1.exon4;Parent=MS.gene071246.t1 |
chr2.1 | CDS | 708641 | 708688 | 708641 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
chr2.1 | exon | 708903 | 709133 | 708903 | ID=MS.gene071246.t1.exon5;Parent=MS.gene071246.t1 |
chr2.1 | CDS | 708903 | 709133 | 708903 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
Gene Sequence |
Protein sequence |