Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071246.t1 | XP_013465620.1 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 9.90E-246 | 859 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071246.t1 | Q9S9N4 | 82.6 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 5.4e-200 | 698.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071246.t1 | G7ZYX9 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 7.1e-246 | 859.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057130 | MS.gene071246 | -0.805435 | 1.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063969 | MS.gene071246 | PPI |
| MS.gene98061 | MS.gene071246 | PPI |
| MS.gene071246 | MS.gene063967 | PPI |
| MS.gene40181 | MS.gene071246 | PPI |
| MS.gene40853 | MS.gene071246 | PPI |
| MS.gene046935 | MS.gene071246 | PPI |
| MS.gene92350 | MS.gene071246 | PPI |
| MS.gene024949 | MS.gene071246 | PPI |
| MS.gene054723 | MS.gene071246 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071246.t1 | MTR_2g105270 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene071246.t1 | MTR_2g105270 | 99.731 | 372 | 1 | 0 | 1 | 372 | 1 | 372 | 0.0 | 754 |
| MS.gene071246.t1 | MTR_2g105270 | 99.440 | 357 | 2 | 0 | 1 | 357 | 1 | 357 | 0.0 | 724 |
| MS.gene071246.t1 | MTR_5g045590 | 52.941 | 425 | 152 | 5 | 31 | 447 | 20 | 404 | 8.47e-143 | 414 |
| MS.gene071246.t1 | MTR_5g005240 | 46.018 | 452 | 199 | 9 | 24 | 446 | 8 | 443 | 1.38e-115 | 346 |
| MS.gene071246.t1 | MTR_1g076210 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
| MS.gene071246.t1 | MTR_1g093280 | 48.058 | 412 | 168 | 9 | 42 | 446 | 16 | 388 | 3.62e-101 | 307 |
| MS.gene071246.t1 | MTR_1g040495 | 43.846 | 390 | 171 | 7 | 51 | 437 | 15 | 359 | 1.28e-98 | 300 |
| MS.gene071246.t1 | MTR_1g106065 | 41.135 | 423 | 216 | 9 | 41 | 445 | 11 | 418 | 2.67e-94 | 291 |
| MS.gene071246.t1 | MTR_8g088670 | 42.647 | 408 | 193 | 9 | 43 | 446 | 50 | 420 | 2.57e-93 | 288 |
| MS.gene071246.t1 | MTR_8g094880 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
| MS.gene071246.t1 | MTR_8g094905 | 39.954 | 438 | 218 | 9 | 28 | 447 | 13 | 423 | 5.81e-93 | 287 |
| MS.gene071246.t1 | MTR_7g096170 | 45.771 | 402 | 173 | 7 | 43 | 438 | 17 | 379 | 3.74e-91 | 281 |
| MS.gene071246.t1 | MTR_7g096170 | 46.114 | 386 | 164 | 6 | 43 | 423 | 17 | 363 | 1.34e-87 | 272 |
| MS.gene071246.t1 | MTR_7g096170 | 45.946 | 333 | 137 | 5 | 43 | 371 | 17 | 310 | 5.70e-70 | 224 |
| MS.gene071246.t1 | MTR_8g088670 | 42.089 | 316 | 148 | 6 | 43 | 357 | 50 | 331 | 1.01e-64 | 212 |
| MS.gene071246.t1 | MTR_8g088670 | 41.250 | 320 | 153 | 6 | 43 | 361 | 50 | 335 | 1.11e-64 | 212 |
| MS.gene071246.t1 | MTR_7g096170 | 49.237 | 262 | 107 | 5 | 179 | 438 | 45 | 282 | 3.44e-60 | 198 |
| MS.gene071246.t1 | MTR_1g040475 | 44.041 | 193 | 89 | 2 | 51 | 243 | 19 | 192 | 1.00e-42 | 150 |
| MS.gene071246.t1 | MTR_1g076220 | 37.262 | 263 | 109 | 5 | 185 | 446 | 21 | 228 | 1.27e-40 | 145 |
| MS.gene071246.t1 | MTR_1g093370 | 46.753 | 154 | 78 | 2 | 297 | 446 | 13 | 166 | 1.17e-34 | 127 |
| MS.gene071246.t1 | MTR_2g059110 | 55.000 | 80 | 36 | 0 | 42 | 121 | 8 | 87 | 2.40e-23 | 94.4 |
| MS.gene071246.t1 | MTR_2g059120 | 59.091 | 66 | 27 | 0 | 56 | 121 | 20 | 85 | 1.99e-19 | 83.6 |
| MS.gene071246.t1 | MTR_1g040455 | 41.414 | 99 | 53 | 2 | 351 | 446 | 1 | 97 | 6.51e-18 | 79.3 |
| MS.gene071246.t1 | MTR_1g055050 | 42.857 | 133 | 72 | 3 | 139 | 271 | 12 | 140 | 3.92e-17 | 81.3 |
| MS.gene071246.t1 | MTR_8g098970 | 67.308 | 52 | 17 | 0 | 241 | 292 | 1 | 52 | 1.06e-16 | 74.7 |
| MS.gene071246.t1 | MTR_2g100150 | 32.955 | 176 | 68 | 6 | 50 | 221 | 15 | 144 | 3.72e-15 | 73.6 |
| MS.gene071246.t1 | MTR_2g084565 | 22.727 | 396 | 233 | 6 | 53 | 445 | 118 | 443 | 5.11e-14 | 73.9 |
| MS.gene071246.t1 | MTR_8g098965 | 50.000 | 90 | 27 | 3 | 200 | 289 | 47 | 118 | 6.49e-14 | 68.9 |
| MS.gene071246.t1 | MTR_3g020210 | 80.556 | 36 | 7 | 0 | 265 | 300 | 51 | 86 | 1.29e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene071246.t1 | AT1G16010 | 82.628 | 449 | 70 | 5 | 1 | 448 | 1 | 442 | 0.0 | 734 |
| MS.gene071246.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
| MS.gene071246.t1 | AT1G80900 | 79.955 | 449 | 83 | 4 | 1 | 448 | 1 | 443 | 0.0 | 715 |
| MS.gene071246.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
| MS.gene071246.t1 | AT2G03620 | 52.809 | 445 | 171 | 9 | 13 | 448 | 7 | 421 | 4.70e-139 | 405 |
| MS.gene071246.t1 | AT3G19640 | 44.843 | 446 | 188 | 10 | 51 | 446 | 46 | 483 | 1.83e-114 | 345 |
| MS.gene071246.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 27 | 395 | 1.20e-108 | 327 |
| MS.gene071246.t1 | AT5G09690 | 47.689 | 411 | 170 | 8 | 39 | 446 | 16 | 384 | 1.50e-108 | 326 |
| MS.gene071246.t1 | AT5G09690 | 49.482 | 386 | 150 | 8 | 39 | 421 | 27 | 370 | 1.52e-104 | 316 |
| MS.gene071246.t1 | AT3G58970 | 41.805 | 421 | 190 | 9 | 41 | 446 | 54 | 434 | 1.32e-98 | 302 |
| MS.gene071246.t1 | AT5G64560 | 45.985 | 411 | 186 | 5 | 39 | 446 | 15 | 392 | 5.64e-95 | 291 |
| MS.gene071246.t1 | AT5G09690 | 49.143 | 350 | 130 | 5 | 39 | 384 | 16 | 321 | 4.17e-93 | 284 |
| MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
| MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 27 | 329 | 4.37e-93 | 285 |
| MS.gene071246.t1 | AT5G09690 | 50.437 | 343 | 130 | 6 | 39 | 381 | 27 | 329 | 6.31e-93 | 285 |
| MS.gene071246.t1 | AT5G09690 | 49.429 | 350 | 123 | 6 | 39 | 381 | 16 | 318 | 6.55e-93 | 284 |
| MS.gene071246.t1 | AT5G09690 | 49.280 | 347 | 128 | 5 | 39 | 381 | 16 | 318 | 7.00e-93 | 284 |
| MS.gene071246.t1 | AT5G64560 | 48.518 | 371 | 156 | 5 | 39 | 407 | 15 | 352 | 4.63e-91 | 281 |
| MS.gene071246.t1 | AT5G09690 | 43.066 | 411 | 174 | 8 | 39 | 446 | 16 | 369 | 1.37e-87 | 272 |
| MS.gene071246.t1 | AT5G09690 | 45.875 | 303 | 124 | 6 | 43 | 345 | 20 | 282 | 1.36e-67 | 218 |
| MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene071246.t1 | AT5G09690 | 45.603 | 307 | 127 | 6 | 39 | 345 | 27 | 293 | 1.82e-67 | 218 |
| MS.gene071246.t1 | AT4G28580 | 36.430 | 409 | 208 | 11 | 43 | 446 | 46 | 407 | 8.05e-67 | 219 |
| MS.gene071246.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
| MS.gene071246.t1 | AT5G09720 | 40.532 | 301 | 128 | 6 | 51 | 344 | 20 | 276 | 7.74e-59 | 195 |
| MS.gene071246.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
| MS.gene071246.t1 | AT5G22830 | 25.558 | 403 | 208 | 12 | 53 | 445 | 133 | 453 | 2.83e-16 | 81.3 |
Find 111 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTGGTGGCAGGAATATT+TGG | 0.196891 | 2.1:+708975 | MS.gene071246:CDS |
| ATTATTTACCTTTCGAATTC+AGG | 0.197360 | 2.1:+706301 | MS.gene071246:CDS |
| GAAGATCAGTACTCTAAATT+TGG | 0.251205 | 2.1:+708041 | MS.gene071246:CDS |
| CATATTTATCAAGGGAATTC+AGG | 0.256762 | 2.1:-706131 | None:intergenic |
| ACATTTGTGGTTGCAATCTT+TGG | 0.293975 | 2.1:+708954 | MS.gene071246:CDS |
| CGCAAACTCCTGTTATTATA+AGG | 0.306482 | 2.1:-709049 | None:intergenic |
| CAGTGGGTCCTTATAATAAC+AGG | 0.314280 | 2.1:+709041 | MS.gene071246:CDS |
| GAGTGGTGGCAGGAATATTT+GGG | 0.321680 | 2.1:+708976 | MS.gene071246:CDS |
| TTAAAAGCGGATGCAGGTTT+TGG | 0.321979 | 2.1:-705802 | None:intergenic |
| TGTTGGTGTAGCTTCTTATA+GGG | 0.330077 | 2.1:-709126 | None:intergenic |
| AATTCCTATTGCCTCTCCTT+TGG | 0.347908 | 2.1:-706248 | None:intergenic |
| TGGGCGAGGTGGGCGAGGTC+TGG | 0.351158 | 2.1:+706202 | MS.gene071246:CDS |
| AATTCGAAAGGTAAATAATC+AGG | 0.361564 | 2.1:-706297 | None:intergenic |
| TGGGGTGGGCGAGGTGGGCG+AGG | 0.366635 | 2.1:+706197 | MS.gene071246:CDS |
| ATCAATCGACCAACGGCCTC+TGG | 0.379573 | 2.1:+705838 | MS.gene071246:CDS |
| AATTGAGGCTTATCCGTTGC+TGG | 0.393934 | 2.1:+708005 | MS.gene071246:CDS |
| GCAGATGGGACATCAAATAA+TGG | 0.395904 | 2.1:-709014 | None:intergenic |
| CCTTCTGAACTCTCCTAGTC+AGG | 0.408120 | 2.1:-708098 | None:intergenic |
| ACTCACAACTGCAACATTTG+TGG | 0.415751 | 2.1:+708941 | MS.gene071246:CDS |
| TTATTTACCTTTCGAATTCA+GGG | 0.417761 | 2.1:+706302 | MS.gene071246:CDS |
| GGCAGCAGAGTTAGAAATTG+AGG | 0.418070 | 2.1:+707990 | MS.gene071246:intron |
| TATGGATGATGATGGTGATA+TGG | 0.419241 | 2.1:+708236 | MS.gene071246:CDS |
| TCCCTACCAAGGATTGTTGA+TGG | 0.421053 | 2.1:-706045 | None:intergenic |
| AGATGAAATAGAGCAGCTTA+TGG | 0.421927 | 2.1:+708218 | MS.gene071246:CDS |
| TCCTTTGGTTCATGTCAGAA+TGG | 0.426763 | 2.1:-706233 | None:intergenic |
| CAACGACGGTTGACAACAGC+TGG | 0.431418 | 2.1:+706177 | MS.gene071246:CDS |
| GACAACAGCTGGGGTGGGCG+AGG | 0.437325 | 2.1:+706188 | MS.gene071246:CDS |
| TGGATCCGTGTTGACACATC+TGG | 0.446625 | 2.1:+705925 | MS.gene071246:CDS |
| AGCCTCCGAGAGTGAGAGTC+AGG | 0.448161 | 2.1:-708387 | None:intergenic |
| AGATTTCATCAACATTCAAC+TGG | 0.455223 | 2.1:+708667 | MS.gene071246:CDS |
| GAGTCAGGTGGTGATGAAAC+AGG | 0.460932 | 2.1:-708372 | None:intergenic |
| ACAGCTGGGGTGGGCGAGGT+GGG | 0.461601 | 2.1:+706192 | MS.gene071246:CDS |
| GCAATCTTTGGAGTGGTGGC+AGG | 0.465654 | 2.1:+708966 | MS.gene071246:CDS |
| ATCAAGTAGGCGAAGATCAC+GGG | 0.467040 | 2.1:-706007 | None:intergenic |
| TTGTGAGTAAAAGCTCAAAC+TGG | 0.470435 | 2.1:-708926 | None:intergenic |
| AACAGCTGGGGTGGGCGAGG+TGG | 0.471121 | 2.1:+706191 | MS.gene071246:CDS |
| TGAACCAAAGGAGAGGCAAT+AGG | 0.472243 | 2.1:+706244 | MS.gene071246:CDS |
| GTCTACCCATCAACAATCCT+TGG | 0.472976 | 2.1:+706039 | MS.gene071246:CDS |
| ATTGCAATACATATTTATCA+AGG | 0.473828 | 2.1:-706140 | None:intergenic |
| CAGGGCTCTTGAAGTTGCCC+TGG | 0.477339 | 2.1:+706320 | MS.gene071246:CDS |
| AACAATCCTTGGTAGGGAAA+AGG | 0.485245 | 2.1:+706050 | MS.gene071246:CDS |
| CTTACGTTAAAAGCGGATGC+AGG | 0.495617 | 2.1:-705808 | None:intergenic |
| TTGTAAATCTCGAGCAGATA+CGG | 0.500267 | 2.1:+706079 | MS.gene071246:CDS |
| GAAATGTGCATGCAGCCTCC+AGG | 0.500840 | 2.1:-706338 | None:intergenic |
| TATGGAGATCAGTCTATGGT+TGG | 0.502971 | 2.1:+708306 | MS.gene071246:CDS |
| GGTGATGAAACAGGAGAGAC+TGG | 0.503084 | 2.1:-708363 | None:intergenic |
| GAGATGGATGCACCATCAAC+CGG | 0.513341 | 2.1:-708336 | None:intergenic |
| AGAAGAGCTTGAGCATTGCT+AGG | 0.517888 | 2.1:+708412 | MS.gene071246:CDS |
| CTCCATAATGGCGGATCTCA+AGG | 0.518229 | 2.1:+705765 | None:intergenic |
| GGCTCTTGAAGTTGCCCTGG+AGG | 0.521464 | 2.1:+706323 | MS.gene071246:CDS |
| CCCTACCAAGGATTGTTGAT+GGG | 0.521728 | 2.1:-706044 | None:intergenic |
| ATGTCCCATCTGCATTTCAG+TGG | 0.522155 | 2.1:+709024 | MS.gene071246:CDS |
| ACGGTTGACAACAGCTGGGG+TGG | 0.531980 | 2.1:+706182 | MS.gene071246:CDS |
| ATTCGAAAGGTAAATAATCA+GGG | 0.532696 | 2.1:-706296 | None:intergenic |
| GTTGGATATAGACCGGTTGA+TGG | 0.535505 | 2.1:+708324 | MS.gene071246:CDS |
| GTCTATGGTTGGATATAGAC+CGG | 0.535718 | 2.1:+708317 | MS.gene071246:CDS |
| TGTGGTTCTTCAAGTACAGA+AGG | 0.542985 | 2.1:+709096 | MS.gene071246:CDS |
| TGACACATCTGGAAACTCTC+AGG | 0.543785 | 2.1:+705936 | MS.gene071246:CDS |
| TGTCCCATCTGCATTTCAGT+GGG | 0.554672 | 2.1:+709025 | MS.gene071246:CDS |
| CTTATAATAACAGGAGTTTG+CGG | 0.555411 | 2.1:+709050 | MS.gene071246:CDS |
| CACCACCTGACTCTCACTCT+CGG | 0.557224 | 2.1:+708382 | MS.gene071246:CDS |
| GAGGTCAAGAAGCGAGGCCA+AGG | 0.561541 | 2.1:+705892 | MS.gene071246:CDS |
| GATCAAGTAGGCGAAGATCA+CGG | 0.562420 | 2.1:-706008 | None:intergenic |
| AGGAGAGACTGGAAGAGAGA+TGG | 0.565175 | 2.1:-708352 | None:intergenic |
| CCCATCAACAATCCTTGGTA+GGG | 0.567511 | 2.1:+706044 | MS.gene071246:CDS |
| GAGGCTTATCCGTTGCTGGA+TGG | 0.568522 | 2.1:+708009 | MS.gene071246:CDS |
| TTGCAATACATATTTATCAA+GGG | 0.575605 | 2.1:-706139 | None:intergenic |
| GGAGTCGACACGAGAGCATG+AGG | 0.579329 | 2.1:+708433 | MS.gene071246:CDS |
| GGTTGCAATCTTTGGAGTGG+TGG | 0.579624 | 2.1:+708962 | MS.gene071246:CDS |
| GTAGACTTGTTGCCCTGACT+AGG | 0.581008 | 2.1:+708085 | MS.gene071246:CDS |
| TCAAGGAGTGGACGTTGTCG+AGG | 0.581652 | 2.1:+705873 | MS.gene071246:CDS |
| TGGAAACTCTCAGGTCATTG+AGG | 0.582420 | 2.1:+705945 | MS.gene071246:CDS |
| TTGAAAAGCTTGCCTTCCAG+AGG | 0.584149 | 2.1:-705854 | None:intergenic |
| GTTGGTGTAGCTTCTTATAG+GGG | 0.584463 | 2.1:-709125 | None:intergenic |
| AGGACCCACTGAAATGCAGA+TGG | 0.588506 | 2.1:-709029 | None:intergenic |
| ACCCATCAACAATCCTTGGT+AGG | 0.588545 | 2.1:+706043 | MS.gene071246:CDS |
| TACCGAGAAGAAAAGACGAA+TGG | 0.590299 | 2.1:+708272 | MS.gene071246:CDS |
| ATCGACCAACGGCCTCTGGA+AGG | 0.591846 | 2.1:+705842 | MS.gene071246:CDS |
| AAATGTGCATGCAGCCTCCA+GGG | 0.592181 | 2.1:-706337 | None:intergenic |
| GCTTGCCTTCCAGAGGCCGT+TGG | 0.593665 | 2.1:-705847 | None:intergenic |
| TGTGGTTGCAATCTTTGGAG+TGG | 0.599940 | 2.1:+708959 | MS.gene071246:CDS |
| CCTGACTAGGAGAGTTCAGA+AGG | 0.604184 | 2.1:+708098 | MS.gene071246:CDS |
| GTGTATTATTACAGCAGATG+AGG | 0.604721 | 2.1:+706101 | MS.gene071246:CDS |
| ACCCTCTCTTACGTTAAAAG+CGG | 0.608315 | 2.1:-705815 | None:intergenic |
| CGGTTGACAACAGCTGGGGT+GGG | 0.611309 | 2.1:+706183 | MS.gene071246:CDS |
| AGTAGGCGAAGATCACGGGC+AGG | 0.615154 | 2.1:-706003 | None:intergenic |
| GGATCCACGATTTAAGACCT+TGG | 0.615463 | 2.1:-705909 | None:intergenic |
| AACGACGGTTGACAACAGCT+GGG | 0.618774 | 2.1:+706178 | MS.gene071246:CDS |
| ACCATTCTGACATGAACCAA+AGG | 0.623235 | 2.1:+706232 | MS.gene071246:CDS |
| TCAAGAGCCCTGAATTCGAA+AGG | 0.625788 | 2.1:-706309 | None:intergenic |
| ATGTGATTGATCTTCAACGA+CGG | 0.626824 | 2.1:+706163 | MS.gene071246:CDS |
| GAGCAGCTTATGGATGATGA+TGG | 0.627314 | 2.1:+708228 | MS.gene071246:CDS |
| ATGCACATTTCTTGACACCC+AGG | 0.632838 | 2.1:+706350 | MS.gene071246:CDS |
| AGACAAACACAGGATCAAGT+AGG | 0.642570 | 2.1:-706020 | None:intergenic |
| CACTCTAAACAAGTTGACAT+CGG | 0.643907 | 2.1:+708530 | MS.gene071246:CDS |
| CTTCTGAACTCTCCTAGTCA+GGG | 0.644832 | 2.1:-708097 | None:intergenic |
| TTCGAAAGGTAAATAATCAG+GGG | 0.653361 | 2.1:-706295 | None:intergenic |
| GATGTCAGTCCATCCAGCAA+CGG | 0.656707 | 2.1:-708018 | None:intergenic |
| GAGGCCAAGGTCTTAAATCG+TGG | 0.657526 | 2.1:+705905 | MS.gene071246:CDS |
| GTTGTCGAGGTCAAGAAGCG+AGG | 0.667662 | 2.1:+705886 | MS.gene071246:CDS |
| CTCCGAGAGTGAGAGTCAGG+TGG | 0.667939 | 2.1:-708384 | None:intergenic |
| AGAGGGTATCAATCGACCAA+CGG | 0.670365 | 2.1:+705831 | MS.gene071246:CDS |
| GTTGATGGGTAGACAAACAC+AGG | 0.672622 | 2.1:-706030 | None:intergenic |
| CACGGGCAGGAAGATCGCAA+CGG | 0.672945 | 2.1:-705990 | None:intergenic |
| TATTATTACAGGATAATGTG+CGG | 0.676578 | 2.1:+708892 | MS.gene071246:intron |
| GGACCCACTGAAATGCAGAT+GGG | 0.678111 | 2.1:-709028 | None:intergenic |
| AGTTTCCAGATGTGTCAACA+CGG | 0.680366 | 2.1:-705930 | None:intergenic |
| TAATGGCGGATCTCAAGGAG+CGG | 0.682101 | 2.1:+705770 | None:intergenic |
| TCTGACATGAACCAAAGGAG+AGG | 0.687908 | 2.1:+706237 | MS.gene071246:CDS |
| CACCTGACTCTCACTCTCGG+AGG | 0.701741 | 2.1:+708385 | MS.gene071246:CDS |
| ACGACGGTTGACAACAGCTG+GGG | 0.707887 | 2.1:+706179 | MS.gene071246:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTTATATTATACATTAT+AGG | - | chr2.1:707466-707485 | None:intergenic | 10.0% |
| !!! | TTTTATGTATAATATAATGT+AGG | + | chr2.1:707311-707330 | MS.gene071246:intron | 10.0% |
| !! | AATGTATAATATAACTTATG+TGG | + | chr2.1:707468-707487 | MS.gene071246:intron | 15.0% |
| !! | ACAAAAAATACATAGAAAAA+AGG | + | chr2.1:707549-707568 | MS.gene071246:intron | 15.0% |
| !! | ATATAAGTTTGATATACAAA+AGG | - | chr2.1:707098-707117 | None:intergenic | 15.0% |
| !! | ATTTAATTGGAACAAATTAA+AGG | + | chr2.1:707362-707381 | MS.gene071246:intron | 15.0% |
| !! | GTTACAATTAAATAACTTAA+AGG | + | chr2.1:707422-707441 | MS.gene071246:intron | 15.0% |
| !! | GTTATTTAATTGTAACAAAT+TGG | - | chr2.1:707418-707437 | None:intergenic | 15.0% |
| !! | TTCATTTATATAGAAAAAGA+AGG | + | chr2.1:707795-707814 | MS.gene071246:intron | 15.0% |
| !!! | GATGTATATTAAATTTTGTT+TGG | + | chr2.1:706608-706627 | MS.gene071246:intron | 15.0% |
| !!! | TTCTTTTTCTATATAAATGA+AGG | - | chr2.1:707796-707815 | None:intergenic | 15.0% |
| !! | AAACTCAAGATCAAATAAAT+GGG | - | chr2.1:707052-707071 | None:intergenic | 20.0% |
| !! | ACTAATAACCAAAATACAAT+AGG | - | chr2.1:708741-708760 | None:intergenic | 20.0% |
| !! | ATTGCAATACATATTTATCA+AGG | - | chr2.1:706143-706162 | None:intergenic | 20.0% |
| !! | CAAGTTCATAATTAAATCAA+AGG | + | chr2.1:706379-706398 | MS.gene071246:intron | 20.0% |
| !! | TACAATGTATGTATTATTAC+AGG | + | chr2.1:708881-708900 | MS.gene071246:intron | 20.0% |
| !! | TCTTCATATTATTGTTCATT+TGG | + | chr2.1:707923-707942 | MS.gene071246:intron | 20.0% |
| !! | TGTTCCAATTAAATAACTTT+AGG | - | chr2.1:707356-707375 | None:intergenic | 20.0% |
| !! | TTGCAATACATATTTATCAA+GGG | - | chr2.1:706142-706161 | None:intergenic | 20.0% |
| !! | TTTCTATAGAATTGTTTACA+TGG | + | chr2.1:706494-706513 | MS.gene071246:intron | 20.0% |
| !!! | TCTATAGAAATACAAGATTT+TGG | - | chr2.1:706484-706503 | None:intergenic | 20.0% |
| !!! | TTTTAACTGAAACAAGAAAA+TGG | - | chr2.1:708627-708646 | None:intergenic | 20.0% |
| ! | AAATACAATAGGATAACCTT+TGG | - | chr2.1:708730-708749 | None:intergenic | 25.0% |
| ! | AATTCGAAAGGTAAATAATC+AGG | - | chr2.1:706300-706319 | None:intergenic | 25.0% |
| ! | AGCAATTAACAATTTAACAG+TGG | + | chr2.1:707645-707664 | MS.gene071246:intron | 25.0% |
| ! | AGTTAATATAGATAACAGTG+TGG | - | chr2.1:708563-708582 | None:intergenic | 25.0% |
| ! | AGTTGAAAATGACAATTGAT+AGG | + | chr2.1:708153-708172 | MS.gene071246:intron | 25.0% |
| ! | ATTATTTACCTTTCGAATTC+AGG | + | chr2.1:706301-706320 | MS.gene071246:CDS | 25.0% |
| ! | ATTCGAAAGGTAAATAATCA+GGG | - | chr2.1:706299-706318 | None:intergenic | 25.0% |
| ! | CAAACTCAAGATCAAATAAA+TGG | - | chr2.1:707053-707072 | None:intergenic | 25.0% |
| ! | GGTTCCTAAAGTTATTTAAT+TGG | + | chr2.1:707349-707368 | MS.gene071246:intron | 25.0% |
| ! | GTTAATATAGATAACAGTGT+GGG | - | chr2.1:708562-708581 | None:intergenic | 25.0% |
| ! | TAAAGTAAGTCAAGAATGAA+AGG | - | chr2.1:706437-706456 | None:intergenic | 25.0% |
| ! | TAAATAACTTAAAGGACCTA+TGG | + | chr2.1:707430-707449 | MS.gene071246:intron | 25.0% |
| ! | TATTATTACAGGATAATGTG+CGG | + | chr2.1:708892-708911 | MS.gene071246:intron | 25.0% |
| ! | TCTATTTATCACTAACTTCT+AGG | - | chr2.1:707528-707547 | None:intergenic | 25.0% |
| ! | TGGTACGAAAAAAACTTAAA+GGG | + | chr2.1:707392-707411 | MS.gene071246:intron | 25.0% |
| ! | TTATTTACCTTTCGAATTCA+GGG | + | chr2.1:706302-706321 | MS.gene071246:CDS | 25.0% |
| ! | TTCTCTATTCTATTTGCAAA+AGG | + | chr2.1:707969-707988 | MS.gene071246:intron | 25.0% |
| ! | TTGTAAAACATGTGAATATG+AGG | - | chr2.1:707205-707224 | None:intergenic | 25.0% |
| ! | TTTATATAGAAAAAGAAGGC+CGG | + | chr2.1:707799-707818 | MS.gene071246:intron | 25.0% |
| !! | AAGGTTATCCTATTGTATTT+TGG | + | chr2.1:708730-708749 | MS.gene071246:intron | 25.0% |
| !! | AATCAAAGGCTATATTCTTT+TGG | + | chr2.1:706393-706412 | MS.gene071246:intron | 25.0% |
| !! | ATATAACTTATGTGGTTTGT+TGG | + | chr2.1:707476-707495 | MS.gene071246:intron | 25.0% |
| !!! | GGGAAGTATTATCATATTTA+AGG | + | chr2.1:706543-706562 | MS.gene071246:intron | 25.0% |
| AAACGGTGATAGATAAATTG+CGG | - | chr2.1:708604-708623 | None:intergenic | 30.0% | |
| AACAAATTAAAGGATGCAAG+TGG | + | chr2.1:707372-707391 | MS.gene071246:intron | 30.0% | |
| AATTTCTTTCCATCATACCA+TGG | - | chr2.1:707748-707767 | None:intergenic | 30.0% | |
| AGATTTCATCAACATTCAAC+TGG | + | chr2.1:708667-708686 | MS.gene071246:CDS | 30.0% | |
| ATACTAATCAAGCAAGCATA+TGG | - | chr2.1:707898-707917 | None:intergenic | 30.0% | |
| ATATACTTACCATGGTATGA+TGG | + | chr2.1:707736-707755 | MS.gene071246:intron | 30.0% | |
| ATTATGAACTTGTACTAACC+TGG | - | chr2.1:706371-706390 | None:intergenic | 30.0% | |
| CAAATCACAAATGAACTTGT+AGG | + | chr2.1:706567-706586 | MS.gene071246:intron | 30.0% | |
| CAATATTAGCTCAGCAAATA+TGG | - | chr2.1:708181-708200 | None:intergenic | 30.0% | |
| CATATTTATCAAGGGAATTC+AGG | - | chr2.1:706134-706153 | None:intergenic | 30.0% | |
| CTGAAACAAGAAAATGGAAA+CGG | - | chr2.1:708621-708640 | None:intergenic | 30.0% | |
| CTTATAATAACAGGAGTTTG+CGG | + | chr2.1:709050-709069 | MS.gene071246:CDS | 30.0% | |
| GAAGATCAGTACTCTAAATT+TGG | + | chr2.1:708041-708060 | MS.gene071246:CDS | 30.0% | |
| GTGGTACGAAAAAAACTTAA+AGG | + | chr2.1:707391-707410 | MS.gene071246:intron | 30.0% | |
| TAATGCAGTTACTCTAATAC+TGG | - | chr2.1:706655-706674 | None:intergenic | 30.0% | |
| TATAGGCTAAATTACACCAT+AGG | - | chr2.1:707449-707468 | None:intergenic | 30.0% | |
| TGTTTATTCTGGTGAAATGT+AGG | + | chr2.1:707618-707637 | MS.gene071246:intron | 30.0% | |
| TTATATAGAAAAAGAAGGCC+GGG | + | chr2.1:707800-707819 | MS.gene071246:intron | 30.0% | |
| TTATATCAAGGAACTCTGAT+TGG | + | chr2.1:706797-706816 | MS.gene071246:intron | 30.0% | |
| TTATGAACTTGTACTAACCT+GGG | - | chr2.1:706370-706389 | None:intergenic | 30.0% | |
| TTCGAAAGGTAAATAATCAG+GGG | - | chr2.1:706298-706317 | None:intergenic | 30.0% | |
| TTTCTCATATTAGTCACCAA+AGG | + | chr2.1:708711-708730 | MS.gene071246:intron | 30.0% | |
| ! | AGAAGGTGATGTTCATTTTA+TGG | + | chr2.1:708115-708134 | MS.gene071246:intron | 30.0% |
| ! | ATGGTATGATGGAAAGAAAT+TGG | + | chr2.1:707747-707766 | MS.gene071246:intron | 30.0% |
| ! | ATTTTATGGAGATCAGTCTA+TGG | + | chr2.1:708302-708321 | MS.gene071246:CDS | 30.0% |
| ! | CACATGTTTTACAAAGCAAT+GGG | + | chr2.1:707211-707230 | MS.gene071246:intron | 30.0% |
| ! | GTATATTTTCTGCATTTGTG+TGG | + | chr2.1:709078-709097 | MS.gene071246:CDS | 30.0% |
| ! | TATTTGCTGAGCTAATATTG+TGG | + | chr2.1:708181-708200 | MS.gene071246:intron | 30.0% |
| ! | TCACATGTTTTACAAAGCAA+TGG | + | chr2.1:707210-707229 | MS.gene071246:intron | 30.0% |
| !! | CTCTAGAATGGTTTCTTTAT+AGG | + | chr2.1:707161-707180 | MS.gene071246:intron | 30.0% |
| !! | CTTACTTTAGAACAGAGAAA+TGG | + | chr2.1:706448-706467 | MS.gene071246:intron | 30.0% |
| !! | TCATCTACTTTTCTTGTCAT+TGG | + | chr2.1:707124-707143 | MS.gene071246:intron | 30.0% |
| !! | TCTACTTGCTATGTTTATTC+TGG | + | chr2.1:707607-707626 | MS.gene071246:intron | 30.0% |
| !!! | CGAATGGAATTGTCATTTTA+TGG | + | chr2.1:708288-708307 | MS.gene071246:CDS | 30.0% |
| AAACATGTGAATATGAGGTG+TGG | - | chr2.1:707200-707219 | None:intergenic | 35.0% | |
| AATAAATGGGTAACTGCACT+TGG | - | chr2.1:707039-707058 | None:intergenic | 35.0% | |
| ACATTTGTGGTTGCAATCTT+TGG | + | chr2.1:708954-708973 | MS.gene071246:CDS | 35.0% | |
| AGATGAAATAGAGCAGCTTA+TGG | + | chr2.1:708218-708237 | MS.gene071246:CDS | 35.0% | |
| AGTACTAGTTGTGAATCTTG+TGG | - | chr2.1:707260-707279 | None:intergenic | 35.0% | |
| ATAAATGGGTAACTGCACTT+GGG | - | chr2.1:707038-707057 | None:intergenic | 35.0% | |
| ATGTGATTGATCTTCAACGA+CGG | + | chr2.1:706163-706182 | MS.gene071246:CDS | 35.0% | |
| CATACAGACAACGCATAATT+GGG | + | chr2.1:708804-708823 | MS.gene071246:intron | 35.0% | |
| CGCAAACTCCTGTTATTATA+AGG | - | chr2.1:709052-709071 | None:intergenic | 35.0% | |
| GAGACAAGCACTTTATATCA+AGG | + | chr2.1:706785-706804 | MS.gene071246:intron | 35.0% | |
| GCAACAGAATATTCTAGACT+CGG | - | chr2.1:706943-706962 | None:intergenic | 35.0% | |
| GGTGACTAATATGAGAAAGA+AGG | - | chr2.1:708709-708728 | None:intergenic | 35.0% | |
| GTGTATTATTACAGCAGATG+AGG | + | chr2.1:706101-706120 | MS.gene071246:CDS | 35.0% | |
| TAGATAAATTGCGGTGAAGT+TGG | - | chr2.1:708595-708614 | None:intergenic | 35.0% | |
| TCATACAGACAACGCATAAT+TGG | + | chr2.1:708803-708822 | MS.gene071246:intron | 35.0% | |
| TGAGTTTCTGCATGCAATAT+GGG | + | chr2.1:706523-706542 | MS.gene071246:intron | 35.0% | |
| TGGAGGATATATACTTACCA+TGG | + | chr2.1:707728-707747 | MS.gene071246:intron | 35.0% | |
| TGGTAAGTATATATCCTCCA+TGG | - | chr2.1:707728-707747 | None:intergenic | 35.0% | |
| TGTAGGCTAAATTACACTAG+AGG | + | chr2.1:707328-707347 | MS.gene071246:intron | 35.0% | |
| TTAGAGAAAGCCAGTATGTA+TGG | + | chr2.1:706969-706988 | MS.gene071246:intron | 35.0% | |
| TTGAGTTTCTGCATGCAATA+TGG | + | chr2.1:706522-706541 | MS.gene071246:intron | 35.0% | |
| TTGTAAATCTCGAGCAGATA+CGG | + | chr2.1:706079-706098 | MS.gene071246:CDS | 35.0% | |
| TTGTGAGTAAAAGCTCAAAC+TGG | - | chr2.1:708929-708948 | None:intergenic | 35.0% | |
| ! | CACTCTAAACAAGTTGACAT+CGG | + | chr2.1:708530-708549 | MS.gene071246:CDS | 35.0% |
| ! | GAGTCTAGAATATTCTGTTG+CGG | + | chr2.1:706942-706961 | MS.gene071246:intron | 35.0% |
| ! | TCTTTTTGTGCCATACATAC+TGG | - | chr2.1:706982-707001 | None:intergenic | 35.0% |
| ! | TGTTGGTGGAAAAATTCACT+AGG | + | chr2.1:707493-707512 | MS.gene071246:intron | 35.0% |
| ! | TTCCATTCGTCTTTTCTTCT+CGG | - | chr2.1:708277-708296 | None:intergenic | 35.0% |
| !! | TAACTTATGTGGTTTGTTGG+TGG | + | chr2.1:707479-707498 | MS.gene071246:intron | 35.0% |
| !! | TATGGATGATGATGGTGATA+TGG | + | chr2.1:708236-708255 | MS.gene071246:CDS | 35.0% |
| !! | TCTACTTTTCTTGTCATTGG+TGG | + | chr2.1:707127-707146 | MS.gene071246:intron | 35.0% |
| AACAATCCTTGGTAGGGAAA+AGG | + | chr2.1:706050-706069 | MS.gene071246:CDS | 40.0% | |
| AATTCCTATTGCCTCTCCTT+TGG | - | chr2.1:706251-706270 | None:intergenic | 40.0% | |
| ACCATTCTGACATGAACCAA+AGG | + | chr2.1:706232-706251 | MS.gene071246:CDS | 40.0% | |
| ACCCTCTCTTACGTTAAAAG+CGG | - | chr2.1:705818-705837 | None:intergenic | 40.0% | |
| ACTCACAACTGCAACATTTG+TGG | + | chr2.1:708941-708960 | MS.gene071246:CDS | 40.0% | |
| AGACAAACACAGGATCAAGT+AGG | - | chr2.1:706023-706042 | None:intergenic | 40.0% | |
| AGTTTCCAGATGTGTCAACA+CGG | - | chr2.1:705933-705952 | None:intergenic | 40.0% | |
| CAGTGGGTCCTTATAATAAC+AGG | + | chr2.1:709041-709060 | MS.gene071246:CDS | 40.0% | |
| GCAGATGGGACATCAAATAA+TGG | - | chr2.1:709017-709036 | None:intergenic | 40.0% | |
| GCAGTCTGTAACTGTCTAAA+AGG | - | chr2.1:706748-706767 | None:intergenic | 40.0% | |
| GCATTCTGTTACCACAAAAG+AGG | - | chr2.1:706921-706940 | None:intergenic | 40.0% | |
| GCTAATATTGTGGATGTGTC+AGG | + | chr2.1:708191-708210 | MS.gene071246:intron | 40.0% | |
| GTCTATGGTTGGATATAGAC+CGG | + | chr2.1:708317-708336 | MS.gene071246:CDS | 40.0% | |
| GTTACCACAAAAGAGGTTTC+TGG | - | chr2.1:706914-706933 | None:intergenic | 40.0% | |
| GTTGTCTGTATGAGTATGTG+TGG | - | chr2.1:708796-708815 | None:intergenic | 40.0% | |
| TAAATGGGTAACTGCACTTG+GGG | - | chr2.1:707037-707056 | None:intergenic | 40.0% | |
| TACAGACTGCTTTCTGTTCA+CGG | + | chr2.1:706758-706777 | MS.gene071246:intron | 40.0% | |
| TACCGAGAAGAAAAGACGAA+TGG | + | chr2.1:708272-708291 | MS.gene071246:CDS | 40.0% | |
| TATGGAGATCAGTCTATGGT+TGG | + | chr2.1:708306-708325 | MS.gene071246:CDS | 40.0% | |
| TCTCTGGCATCAAATCAACT+TGG | - | chr2.1:707699-707718 | None:intergenic | 40.0% | |
| TGTGGTTCTTCAAGTACAGA+AGG | + | chr2.1:709096-709115 | MS.gene071246:CDS | 40.0% | |
| TTGAAATCATCCCAAGCAAC+AGG | - | chr2.1:707291-707310 | None:intergenic | 40.0% | |
| TTTCACAGGATTTCTTGTCC+CGG | - | chr2.1:707821-707840 | None:intergenic | 40.0% | |
| ! | ATAGCCAGAAACCTCTTTTG+TGG | + | chr2.1:706907-706926 | MS.gene071246:intron | 40.0% |
| ! | GCACATCAACACATTTTCAC+AGG | - | chr2.1:707835-707854 | None:intergenic | 40.0% |
| ! | TCCTTTGGTTCATGTCAGAA+TGG | - | chr2.1:706236-706255 | None:intergenic | 40.0% |
| ! | TTAAAAGCGGATGCAGGTTT+TGG | - | chr2.1:705805-705824 | None:intergenic | 40.0% |
| ! | TTCGTCTTTTCTTCTCGGTA+AGG | - | chr2.1:708272-708291 | None:intergenic | 40.0% |
| !! | ATCCGCTTTTAACGTAAGAG+AGG | + | chr2.1:705813-705832 | MS.gene071246:CDS | 40.0% |
| !! | TCCGCTTTTAACGTAAGAGA+GGG | + | chr2.1:705814-705833 | MS.gene071246:CDS | 40.0% |
| AAATTCCGTGAGAGATGCAC+AGG | - | chr2.1:707588-707607 | None:intergenic | 45.0% | |
| AATTGAGGCTTATCCGTTGC+TGG | + | chr2.1:708005-708024 | MS.gene071246:CDS | 45.0% | |
| ACAGACAACGCATAATTGGG+AGG | + | chr2.1:708807-708826 | MS.gene071246:intron | 45.0% | |
| ACCCATCAACAATCCTTGGT+AGG | + | chr2.1:706043-706062 | MS.gene071246:CDS | 45.0% | |
| ACTATTCTGTGCCTGTTGCT+TGG | + | chr2.1:707277-707296 | MS.gene071246:intron | 45.0% | |
| AGACAACGCATAATTGGGAG+GGG | + | chr2.1:708809-708828 | MS.gene071246:intron | 45.0% | |
| ATCAAGTAGGCGAAGATCAC+GGG | - | chr2.1:706010-706029 | None:intergenic | 45.0% | |
| ATGCACATTTCTTGACACCC+AGG | + | chr2.1:706350-706369 | MS.gene071246:CDS | 45.0% | |
| ATGTCCCATCTGCATTTCAG+TGG | + | chr2.1:709024-709043 | MS.gene071246:CDS | 45.0% | |
| CAGACAACGCATAATTGGGA+GGG | + | chr2.1:708808-708827 | MS.gene071246:intron | 45.0% | |
| CCCATCAACAATCCTTGGTA+GGG | + | chr2.1:706044-706063 | MS.gene071246:CDS | 45.0% | |
| CCCTACCAAGGATTGTTGAT+GGG | - | chr2.1:706047-706066 | None:intergenic | 45.0% | |
| CTTACGTTAAAAGCGGATGC+AGG | - | chr2.1:705811-705830 | None:intergenic | 45.0% | |
| CTTCTGAACTCTCCTAGTCA+GGG | - | chr2.1:708100-708119 | None:intergenic | 45.0% | |
| GAGCAGCTTATGGATGATGA+TGG | + | chr2.1:708228-708247 | MS.gene071246:CDS | 45.0% | |
| GAGTGGTGGCAGGAATATTT+GGG | + | chr2.1:708976-708995 | MS.gene071246:CDS | 45.0% | |
| GATCAAGTAGGCGAAGATCA+CGG | - | chr2.1:706011-706030 | None:intergenic | 45.0% | |
| GGCAGCAGAGTTAGAAATTG+AGG | + | chr2.1:707990-708009 | MS.gene071246:intron | 45.0% | |
| GTCTACCCATCAACAATCCT+TGG | + | chr2.1:706039-706058 | MS.gene071246:CDS | 45.0% | |
| GTTGGATATAGACCGGTTGA+TGG | + | chr2.1:708324-708343 | MS.gene071246:CDS | 45.0% | |
| TCAAGAGCCCTGAATTCGAA+AGG | - | chr2.1:706312-706331 | None:intergenic | 45.0% | |
| TCCCTACCAAGGATTGTTGA+TGG | - | chr2.1:706048-706067 | None:intergenic | 45.0% | |
| TCTGACATGAACCAAAGGAG+AGG | + | chr2.1:706237-706256 | MS.gene071246:CDS | 45.0% | |
| TGAACCAAAGGAGAGGCAAT+AGG | + | chr2.1:706244-706263 | MS.gene071246:CDS | 45.0% | |
| TGACACATCTGGAAACTCTC+AGG | + | chr2.1:705936-705955 | MS.gene071246:CDS | 45.0% | |
| TGGAAACTCTCAGGTCATTG+AGG | + | chr2.1:705945-705964 | MS.gene071246:CDS | 45.0% | |
| TGTCCCATCTGCATTTCAGT+GGG | + | chr2.1:709025-709044 | MS.gene071246:CDS | 45.0% | |
| TTGAAAAGCTTGCCTTCCAG+AGG | - | chr2.1:705857-705876 | None:intergenic | 45.0% | |
| ! | AGAAGAGCTTGAGCATTGCT+AGG | + | chr2.1:708412-708431 | MS.gene071246:CDS | 45.0% |
| ! | CAATAGCCTTTTCCCTACCA+AGG | - | chr2.1:706059-706078 | None:intergenic | 45.0% |
| ! | CTAATACTGGCCTCAATCAG+TGG | - | chr2.1:706642-706661 | None:intergenic | 45.0% |
| ! | CTATTCTGTGCCTGTTGCTT+GGG | + | chr2.1:707278-707297 | MS.gene071246:intron | 45.0% |
| ! | GGATCCACGATTTAAGACCT+TGG | - | chr2.1:705912-705931 | None:intergenic | 45.0% |
| ! | GTTGATGGGTAGACAAACAC+AGG | - | chr2.1:706033-706052 | None:intergenic | 45.0% |
| ! | TCTGGAAGGCAAGCTTTTCA+AGG | + | chr2.1:705856-705875 | MS.gene071246:CDS | 45.0% |
| ! | TGTGGTTGCAATCTTTGGAG+TGG | + | chr2.1:708959-708978 | MS.gene071246:CDS | 45.0% |
| !! | AAGGCAAGCTTTTCAAGGAG+TGG | + | chr2.1:705861-705880 | MS.gene071246:CDS | 45.0% |
| !! | ACCATTCTAGAGTGCGAAAC+AGG | - | chr2.1:707153-707172 | None:intergenic | 45.0% |
| !! | AGAGGGTATCAATCGACCAA+CGG | + | chr2.1:705831-705850 | MS.gene071246:CDS | 45.0% |
| AAATGTGCATGCAGCCTCCA+GGG | - | chr2.1:706340-706359 | None:intergenic | 50.0% | |
| AACGACGGTTGACAACAGCT+GGG | + | chr2.1:706178-706197 | MS.gene071246:CDS | 50.0% | |
| AACGAGAACCGAGAAGAGCT+AGG | - | chr2.1:706864-706883 | None:intergenic | 50.0% | |
| ACGAGAACCGAGAAGAGCTA+GGG | - | chr2.1:706863-706882 | None:intergenic | 50.0% | |
| ACTGCTTTCTGTTCACGGTC+AGG | + | chr2.1:706763-706782 | MS.gene071246:intron | 50.0% | |
| AGGACCCACTGAAATGCAGA+TGG | - | chr2.1:709032-709051 | None:intergenic | 50.0% | |
| AGGAGAGACTGGAAGAGAGA+TGG | - | chr2.1:708355-708374 | None:intergenic | 50.0% | |
| CCTGACTAGGAGAGTTCAGA+AGG | + | chr2.1:708098-708117 | MS.gene071246:CDS | 50.0% | |
| CCTTCTGAACTCTCCTAGTC+AGG | - | chr2.1:708101-708120 | None:intergenic | 50.0% | |
| CGAGAAGAGCTAGGGAGAAA+GGG | - | chr2.1:706855-706874 | None:intergenic | 50.0% | |
| GACAACGCATAATTGGGAGG+GGG | + | chr2.1:708810-708829 | MS.gene071246:intron | 50.0% | |
| GAGATGGATGCACCATCAAC+CGG | - | chr2.1:708339-708358 | None:intergenic | 50.0% | |
| GAGGCCAAGGTCTTAAATCG+TGG | + | chr2.1:705905-705924 | MS.gene071246:CDS | 50.0% | |
| GATGTCAGTCCATCCAGCAA+CGG | - | chr2.1:708021-708040 | None:intergenic | 50.0% | |
| GGACCCACTGAAATGCAGAT+GGG | - | chr2.1:709031-709050 | None:intergenic | 50.0% | |
| GGAGTGGTGGCAGGAATATT+TGG | + | chr2.1:708975-708994 | MS.gene071246:CDS | 50.0% | |
| GGTGATGAAACAGGAGAGAC+TGG | - | chr2.1:708366-708385 | None:intergenic | 50.0% | |
| GTGAACCTGTGCATCTCTCA+CGG | + | chr2.1:707580-707599 | MS.gene071246:intron | 50.0% | |
| ! | CCTTTCTCCCTAGCTCTTCT+CGG | + | chr2.1:706853-706872 | MS.gene071246:intron | 50.0% |
| ! | GAGTCAGGTGGTGATGAAAC+AGG | - | chr2.1:708375-708394 | None:intergenic | 50.0% |
| ! | GCCTGTTTCGCACTCTAGAA+TGG | + | chr2.1:707149-707168 | MS.gene071246:intron | 50.0% |
| ! | GGATCTGTGTCCACTGATTG+AGG | + | chr2.1:706629-706648 | MS.gene071246:intron | 50.0% |
| ! | TGGATCCGTGTTGACACATC+TGG | + | chr2.1:705925-705944 | MS.gene071246:CDS | 50.0% |
| !! | AAAGCGGATGCAGGTTTTGG+TGG | - | chr2.1:705802-705821 | None:intergenic | 50.0% |
| !! | AAGCGGATGCAGGTTTTGGT+GGG | - | chr2.1:705801-705820 | None:intergenic | 50.0% |
| !! | GGTTGCAATCTTTGGAGTGG+TGG | + | chr2.1:708962-708981 | MS.gene071246:CDS | 50.0% |
| !! | GTAGACTTGTTGCCCTGACT+AGG | + | chr2.1:708085-708104 | MS.gene071246:CDS | 50.0% |
| AACGCATAATTGGGAGGGGG+AGG | + | chr2.1:708813-708832 | MS.gene071246:intron | 55.0% | |
| ACGACGGTTGACAACAGCTG+GGG | + | chr2.1:706179-706198 | MS.gene071246:CDS | 55.0% | |
| ACGCATAATTGGGAGGGGGA+GGG | + | chr2.1:708814-708833 | MS.gene071246:intron | 55.0% | |
| ATCAATCGACCAACGGCCTC+TGG | + | chr2.1:705838-705857 | MS.gene071246:CDS | 55.0% | |
| CAACGACGGTTGACAACAGC+TGG | + | chr2.1:706177-706196 | MS.gene071246:CDS | 55.0% | |
| CACCACCTGACTCTCACTCT+CGG | + | chr2.1:708382-708401 | MS.gene071246:CDS | 55.0% | |
| CCGAGAAGAGCTAGGGAGAA+AGG | - | chr2.1:706856-706875 | None:intergenic | 55.0% | |
| GAAATGTGCATGCAGCCTCC+AGG | - | chr2.1:706341-706360 | None:intergenic | 55.0% | |
| GAGGCTTATCCGTTGCTGGA+TGG | + | chr2.1:708009-708028 | MS.gene071246:CDS | 55.0% | |
| GATGCCAGAGACATCGACCA+TGG | + | chr2.1:707708-707727 | MS.gene071246:intron | 55.0% | |
| GGGTAACTGCACTTGGGGAT+GGG | - | chr2.1:707032-707051 | None:intergenic | 55.0% | |
| GTTGTCGAGGTCAAGAAGCG+AGG | + | chr2.1:705886-705905 | MS.gene071246:CDS | 55.0% | |
| TCAAGGAGTGGACGTTGTCG+AGG | + | chr2.1:705873-705892 | MS.gene071246:CDS | 55.0% | |
| TCCTCCATGGTCGATGTCTC+TGG | - | chr2.1:707715-707734 | None:intergenic | 55.0% | |
| TGGGTAACTGCACTTGGGGA+TGG | - | chr2.1:707033-707052 | None:intergenic | 55.0% | |
| !! | GCAATCTTTGGAGTGGTGGC+AGG | + | chr2.1:708966-708985 | MS.gene071246:CDS | 55.0% |
| ACGGTTGACAACAGCTGGGG+TGG | + | chr2.1:706182-706201 | MS.gene071246:CDS | 60.0% | |
| AGCCTCCGAGAGTGAGAGTC+AGG | - | chr2.1:708390-708409 | None:intergenic | 60.0% | |
| AGTAGGCGAAGATCACGGGC+AGG | - | chr2.1:706006-706025 | None:intergenic | 60.0% | |
| ATCGACCAACGGCCTCTGGA+AGG | + | chr2.1:705842-705861 | MS.gene071246:CDS | 60.0% | |
| CACCTGACTCTCACTCTCGG+AGG | + | chr2.1:708385-708404 | MS.gene071246:CDS | 60.0% | |
| CACGGGCAGGAAGATCGCAA+CGG | - | chr2.1:705993-706012 | None:intergenic | 60.0% | |
| CAGGGCTCTTGAAGTTGCCC+TGG | + | chr2.1:706320-706339 | MS.gene071246:CDS | 60.0% | |
| CGGTTGACAACAGCTGGGGT+GGG | + | chr2.1:706183-706202 | MS.gene071246:CDS | 60.0% | |
| CTCCGAGAGTGAGAGTCAGG+TGG | - | chr2.1:708387-708406 | None:intergenic | 60.0% | |
| GAGGTCAAGAAGCGAGGCCA+AGG | + | chr2.1:705892-705911 | MS.gene071246:CDS | 60.0% | |
| GCCAGAGACATCGACCATGG+AGG | + | chr2.1:707711-707730 | MS.gene071246:intron | 60.0% | |
| GGCTCTTGAAGTTGCCCTGG+AGG | + | chr2.1:706323-706342 | MS.gene071246:CDS | 60.0% | |
| ! | GGAGTCGACACGAGAGCATG+AGG | + | chr2.1:708433-708452 | MS.gene071246:CDS | 60.0% |
| GCTTGCCTTCCAGAGGCCGT+TGG | - | chr2.1:705850-705869 | None:intergenic | 65.0% | |
| AACAGCTGGGGTGGGCGAGG+TGG | + | chr2.1:706191-706210 | MS.gene071246:CDS | 70.0% | |
| ACAGCTGGGGTGGGCGAGGT+GGG | + | chr2.1:706192-706211 | MS.gene071246:CDS | 70.0% | |
| GACAACAGCTGGGGTGGGCG+AGG | + | chr2.1:706188-706207 | MS.gene071246:CDS | 70.0% | |
| TGGGCGAGGTGGGCGAGGTC+TGG | + | chr2.1:706202-706221 | MS.gene071246:CDS | 75.0% | |
| ! | TGGGGTGGGCGAGGTGGGCG+AGG | + | chr2.1:706197-706216 | MS.gene071246:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 705772 | 709133 | 705772 | ID=MS.gene071246 |
| chr2.1 | mRNA | 705772 | 709133 | 705772 | ID=MS.gene071246.t1;Parent=MS.gene071246 |
| chr2.1 | exon | 705772 | 706371 | 705772 | ID=MS.gene071246.t1.exon1;Parent=MS.gene071246.t1 |
| chr2.1 | CDS | 705772 | 706371 | 705772 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
| chr2.1 | exon | 707991 | 708119 | 707991 | ID=MS.gene071246.t1.exon2;Parent=MS.gene071246.t1 |
| chr2.1 | CDS | 707991 | 708119 | 707991 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
| chr2.1 | exon | 708213 | 708551 | 708213 | ID=MS.gene071246.t1.exon3;Parent=MS.gene071246.t1 |
| chr2.1 | CDS | 708213 | 708551 | 708213 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
| chr2.1 | exon | 708641 | 708688 | 708641 | ID=MS.gene071246.t1.exon4;Parent=MS.gene071246.t1 |
| chr2.1 | CDS | 708641 | 708688 | 708641 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
| chr2.1 | exon | 708903 | 709133 | 708903 | ID=MS.gene071246.t1.exon5;Parent=MS.gene071246.t1 |
| chr2.1 | CDS | 708903 | 709133 | 708903 | ID=cds.MS.gene071246.t1;Parent=MS.gene071246.t1 |
| Gene Sequence |
| Protein sequence |