Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92601.t1 | XP_013449941.1 | 99.3 | 272 | 2 | 0 | 1 | 272 | 55 | 326 | 1.10E-151 | 545.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92601.t1 | Q0WQX7 | 67.6 | 272 | 81 | 3 | 1 | 269 | 74 | 341 | 8.3e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92601.t1 | B7FIQ5 | 99.3 | 272 | 2 | 0 | 1 | 272 | 55 | 326 | 8.1e-152 | 545.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene92601 | 0.882218 | 1.25E-70 | -1.69E-46 |
| MS.gene056693 | MS.gene92601 | 0.829199 | 5.88E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30745 | MS.gene92601 | PPI |
| MS.gene86383 | MS.gene92601 | PPI |
| MS.gene36213 | MS.gene92601 | PPI |
| MS.gene92601 | MS.gene29030 | PPI |
| MS.gene35637 | MS.gene92601 | PPI |
| MS.gene92601 | MS.gene29113 | PPI |
| MS.gene89034 | MS.gene92601 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92601.t1 | MTR_7g498280 | 99.265 | 272 | 2 | 0 | 1 | 272 | 55 | 326 | 0.0 | 543 |
| MS.gene92601.t1 | MTR_1g101310 | 68.364 | 275 | 75 | 2 | 1 | 272 | 53 | 318 | 1.97e-134 | 382 |
| MS.gene92601.t1 | MTR_4g021755 | 67.279 | 272 | 82 | 2 | 1 | 269 | 62 | 329 | 4.32e-131 | 377 |
| MS.gene92601.t1 | MTR_2g097210 | 64.855 | 276 | 91 | 2 | 1 | 272 | 64 | 337 | 2.91e-120 | 349 |
| MS.gene92601.t1 | MTR_7g061780 | 62.595 | 262 | 92 | 3 | 1 | 260 | 46 | 303 | 3.92e-116 | 337 |
| MS.gene92601.t1 | MTR_2g097210 | 67.227 | 238 | 72 | 2 | 1 | 234 | 64 | 299 | 3.34e-103 | 303 |
| MS.gene92601.t1 | MTR_2g103600 | 57.255 | 255 | 101 | 3 | 1 | 248 | 51 | 304 | 1.37e-96 | 286 |
| MS.gene92601.t1 | MTR_3g073530 | 45.324 | 278 | 142 | 2 | 1 | 271 | 60 | 334 | 4.77e-72 | 226 |
| MS.gene92601.t1 | MTR_2g088290 | 35.581 | 267 | 115 | 7 | 1 | 266 | 1 | 211 | 2.85e-38 | 134 |
| MS.gene92601.t1 | MTR_2g088315 | 45.783 | 83 | 45 | 0 | 46 | 128 | 1 | 83 | 5.77e-20 | 82.4 |
| MS.gene92601.t1 | MTR_8g106030 | 35.714 | 140 | 77 | 2 | 115 | 253 | 99 | 226 | 6.95e-15 | 72.4 |
| MS.gene92601.t1 | MTR_0024s0260 | 27.168 | 173 | 119 | 3 | 51 | 217 | 206 | 377 | 3.59e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92601.t1 | AT5G07250 | 71.111 | 270 | 76 | 1 | 4 | 271 | 76 | 345 | 2.12e-138 | 394 |
| MS.gene92601.t1 | AT1G63120 | 70.632 | 269 | 77 | 1 | 1 | 269 | 51 | 317 | 1.77e-132 | 377 |
| MS.gene92601.t1 | AT2G29050 | 66.909 | 275 | 84 | 3 | 1 | 272 | 74 | 344 | 5.58e-132 | 379 |
| MS.gene92601.t1 | AT1G12750 | 64.074 | 270 | 96 | 1 | 1 | 269 | 38 | 307 | 4.00e-125 | 358 |
| MS.gene92601.t1 | AT1G12750 | 64.074 | 270 | 96 | 1 | 1 | 269 | 38 | 307 | 4.00e-125 | 358 |
| MS.gene92601.t1 | AT1G12750 | 64.074 | 270 | 96 | 1 | 1 | 269 | 38 | 307 | 4.00e-125 | 358 |
| MS.gene92601.t1 | AT1G12750 | 64.074 | 270 | 96 | 1 | 1 | 269 | 38 | 307 | 4.00e-125 | 358 |
| MS.gene92601.t1 | AT1G12750 | 64.074 | 270 | 96 | 1 | 1 | 269 | 38 | 307 | 4.00e-125 | 358 |
| MS.gene92601.t1 | AT3G53780 | 59.259 | 270 | 104 | 2 | 1 | 270 | 84 | 347 | 5.41e-118 | 343 |
| MS.gene92601.t1 | AT2G29050 | 60.289 | 277 | 74 | 5 | 1 | 245 | 74 | 346 | 3.22e-110 | 322 |
| MS.gene92601.t1 | AT3G53780 | 60.256 | 234 | 87 | 2 | 1 | 234 | 84 | 311 | 1.78e-100 | 296 |
| MS.gene92601.t1 | AT5G07250 | 57.407 | 270 | 66 | 2 | 4 | 271 | 76 | 298 | 6.36e-100 | 294 |
| MS.gene92601.t1 | AT3G53780 | 58.667 | 225 | 91 | 1 | 46 | 270 | 1 | 223 | 1.12e-97 | 287 |
| MS.gene92601.t1 | AT4G23070 | 57.090 | 268 | 110 | 2 | 1 | 267 | 49 | 312 | 1.13e-92 | 276 |
| MS.gene92601.t1 | AT1G52580 | 55.731 | 253 | 103 | 4 | 1 | 248 | 51 | 299 | 4.02e-91 | 272 |
| MS.gene92601.t1 | AT1G77860 | 44.086 | 279 | 143 | 3 | 1 | 271 | 66 | 339 | 4.06e-81 | 248 |
| MS.gene92601.t1 | AT1G77860 | 44.086 | 279 | 143 | 3 | 1 | 271 | 66 | 339 | 7.40e-81 | 249 |
| MS.gene92601.t1 | AT1G12750 | 67.097 | 155 | 51 | 0 | 1 | 155 | 38 | 192 | 2.02e-73 | 223 |
| MS.gene92601.t1 | AT1G12750 | 67.763 | 152 | 49 | 0 | 1 | 152 | 38 | 189 | 2.20e-73 | 223 |
| MS.gene92601.t1 | AT1G25290 | 33.974 | 156 | 101 | 2 | 50 | 204 | 157 | 311 | 1.46e-16 | 78.6 |
| MS.gene92601.t1 | AT1G25290 | 32.716 | 162 | 102 | 2 | 50 | 204 | 157 | 318 | 1.28e-15 | 75.9 |
Find 67 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAACTACACTCACTTTAT+TGG | 0.122578 | 6.4:-34310415 | None:intergenic |
| ATTCGCCTTGAACAACAATT+TGG | 0.203114 | 6.4:+34309861 | MS.gene92601:CDS |
| AGGTTTACCAATATGTTCTA+TGG | 0.211456 | 6.4:+34311260 | MS.gene92601:CDS |
| TTCCTTCCCCGTCCTCAATT+TGG | 0.259184 | 6.4:+34311184 | MS.gene92601:CDS |
| GTCGACAATTTCGCTCATAT+TGG | 0.293364 | 6.4:+34311127 | MS.gene92601:CDS |
| AGCATCTCCGTTGGTGCTTC+CGG | 0.298447 | 6.4:+34310330 | MS.gene92601:CDS |
| CATGTGTTCCAACTTCTAAA+TGG | 0.341794 | 6.4:+34312177 | MS.gene92601:CDS |
| GGAATCGTTTACCTAGTATC+TGG | 0.345805 | 6.4:+34310267 | MS.gene92601:CDS |
| ATTGTCATCAATCTTGTGAT+TGG | 0.349416 | 6.4:+34311091 | MS.gene92601:CDS |
| GTTTACCTAGTATCTGGATT+TGG | 0.367101 | 6.4:+34310273 | MS.gene92601:CDS |
| GGAGACTTGTCTCATGCATT+TGG | 0.378901 | 6.4:+34309781 | MS.gene92601:CDS |
| TCACAACAGCATCCCACTTA+AGG | 0.382515 | 6.4:-34309743 | None:intergenic |
| TTCGCCTTGAACAACAATTT+GGG | 0.400132 | 6.4:+34309862 | MS.gene92601:CDS |
| AACCCTTACGTTTCAGAAGA+AGG | 0.412425 | 6.4:-34308230 | None:intergenic |
| TCGCATTTCCATTTAGAAGT+TGG | 0.417696 | 6.4:-34312185 | None:intergenic |
| ATGATCAGTCTGGTCTTCAT+TGG | 0.423207 | 6.4:+34309837 | MS.gene92601:CDS |
| CTCTCGTACTATTGATTGCC+TGG | 0.425859 | 6.4:+34311290 | MS.gene92601:CDS |
| TGGTTTAGTGATGCTATTGC+GGG | 0.429270 | 6.4:+34312112 | MS.gene92601:CDS |
| CGAACCCAAATTGTTGTTCA+AGG | 0.433969 | 6.4:-34309866 | None:intergenic |
| CACAACAGCATCCCACTTAA+GGG | 0.436258 | 6.4:-34309742 | None:intergenic |
| ACTCCAGTTTGTGATAAGTT+CGG | 0.447369 | 6.4:-34310385 | None:intergenic |
| CTTGAACAACAATTTGGGTT+CGG | 0.447883 | 6.4:+34309867 | MS.gene92601:CDS |
| ACACGCTGGAATCATTCATT+TGG | 0.450645 | 6.4:+34309806 | MS.gene92601:CDS |
| TACCTAGTATCTGGATTTGG+TGG | 0.452294 | 6.4:+34310276 | MS.gene92601:CDS |
| TTCCTGACAGGATTTCTCCT+TGG | 0.465293 | 6.4:+34311154 | MS.gene92601:CDS |
| GACAATTTCGCTCATATTGG+CGG | 0.473284 | 6.4:+34311130 | MS.gene92601:CDS |
| TTCCCCGTCCTCAATTTGGT+TGG | 0.484649 | 6.4:+34311188 | MS.gene92601:CDS |
| TTTCCGAACTTATCACAAAC+TGG | 0.485212 | 6.4:+34310382 | MS.gene92601:CDS |
| TAGAAGTTGGAACACATGTC+AGG | 0.485216 | 6.4:-34312172 | None:intergenic |
| GGTTTACCAATATGTTCTAT+GGG | 0.487504 | 6.4:+34311261 | MS.gene92601:CDS |
| TGGAAATTTGCAGTGAGGAT+AGG | 0.489071 | 6.4:+34310246 | MS.gene92601:intron |
| TTGAAAGAGAATCCTTTGCT+TGG | 0.490540 | 6.4:+34308206 | MS.gene92601:CDS |
| TTGAATGGTAGGTTATCCAT+TGG | 0.492130 | 6.4:+34312092 | MS.gene92601:intron |
| ACCTAGTATCTGGATTTGGT+GGG | 0.495725 | 6.4:+34310277 | MS.gene92601:CDS |
| AGCAAAGGATTCTCTTTCAA+AGG | 0.499402 | 6.4:-34308203 | None:intergenic |
| ATACAACCCATAGAACATAT+TGG | 0.500183 | 6.4:-34311267 | None:intergenic |
| GACTTGAGGCGAACACCAGC+AGG | 0.504828 | 6.4:-34311229 | None:intergenic |
| CATATTGGCGGATTCCTGAC+AGG | 0.508734 | 6.4:+34311142 | MS.gene92601:CDS |
| CAAAGATGGGAGCCCTTAAG+TGG | 0.512046 | 6.4:+34309730 | MS.gene92601:CDS |
| AACCAAGGAGAAATCCTGTC+AGG | 0.521407 | 6.4:-34311156 | None:intergenic |
| GGCAGCAAACATGATCAGTC+TGG | 0.524653 | 6.4:+34309827 | MS.gene92601:CDS |
| TTGTGAATCATCACCAAGGA+TGG | 0.525415 | 6.4:+34309760 | MS.gene92601:CDS |
| AAGAGCACCGGAAGCACCAA+CGG | 0.530069 | 6.4:-34310337 | None:intergenic |
| ATGAGACAAGTCTCCATCCT+TGG | 0.532446 | 6.4:-34309773 | None:intergenic |
| GCGCAGCGACATGTTCCTGC+TGG | 0.534637 | 6.4:+34311214 | MS.gene92601:CDS |
| GCGGATACGACCACTGCCAT+TGG | 0.539605 | 6.4:+34312141 | MS.gene92601:CDS |
| TAACCAACCAAATTGAGGAC+GGG | 0.543254 | 6.4:-34311191 | None:intergenic |
| TCCCACCAAATCCAGATACT+AGG | 0.555103 | 6.4:-34310278 | None:intergenic |
| TCGCCTCAAGTCTAAGTACA+AGG | 0.555196 | 6.4:+34311240 | MS.gene92601:CDS |
| TGTGATAAGTTCGGAAAGCA+TGG | 0.557185 | 6.4:-34310376 | None:intergenic |
| TGCGCTAACCAACCAAATTG+AGG | 0.558542 | 6.4:-34311196 | None:intergenic |
| GGTAGTGACACCAATGGCAG+TGG | 0.569166 | 6.4:-34312151 | None:intergenic |
| TTGGTTTAGTGATGCTATTG+CGG | 0.570398 | 6.4:+34312111 | MS.gene92601:CDS |
| CAATAGCATCACTAAACCAA+TGG | 0.573374 | 6.4:-34312108 | None:intergenic |
| TCAGAAGAAGGACCAAGCAA+AGG | 0.588996 | 6.4:-34308218 | None:intergenic |
| ATGCTATTGCGGGGTGAAAG+CGG | 0.592655 | 6.4:+34312122 | MS.gene92601:CDS |
| TCATGCATTTGGTTACACGC+TGG | 0.611101 | 6.4:+34309792 | MS.gene92601:CDS |
| AACCAAATTGAGGACGGGGA+AGG | 0.621571 | 6.4:-34311186 | None:intergenic |
| AACCAACCAAATTGAGGACG+GGG | 0.621889 | 6.4:-34311190 | None:intergenic |
| CTAACCAACCAAATTGAGGA+CGG | 0.637433 | 6.4:-34311192 | None:intergenic |
| AAACCTTGTACTTAGACTTG+AGG | 0.651465 | 6.4:-34311243 | None:intergenic |
| GGGGAAGGAAAATGAAACCA+AGG | 0.657876 | 6.4:-34311171 | None:intergenic |
| TGAGCGAAATTGTCGACATG+TGG | 0.659405 | 6.4:-34311121 | None:intergenic |
| AAAGATGGGAGCCCTTAAGT+GGG | 0.673831 | 6.4:+34309731 | MS.gene92601:CDS |
| ATGTCAGGTAGTGACACCAA+TGG | 0.701971 | 6.4:-34312157 | None:intergenic |
| GGTTTAGTGATGCTATTGCG+GGG | 0.740371 | 6.4:+34312113 | MS.gene92601:CDS |
| GCTGTTGTGAATCATCACCA+AGG | 0.777652 | 6.4:+34309756 | MS.gene92601:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTGTTAATTTTTGA+AGG | + | chr6.4:34309703-34309722 | MS.gene92601:intron | 10.0% |
| !! | AATGACAAAAGAAAAATTAT+TGG | - | chr6.4:34310723-34310742 | None:intergenic | 15.0% |
| !! | ACATTAAAACAAAAAAACAT+GGG | - | chr6.4:34309195-34309214 | None:intergenic | 15.0% |
| !! | AGTTAACAAAAATAAATAGT+TGG | - | chr6.4:34310692-34310711 | None:intergenic | 15.0% |
| !! | TAAAAGAAAATTCAAATCAA+AGG | - | chr6.4:34308921-34308940 | None:intergenic | 15.0% |
| !! | TAATATCATCGTTTAATAAT+AGG | - | chr6.4:34311625-34311644 | None:intergenic | 15.0% |
| !! | TTGATATAAAAATAAGATCA+AGG | - | chr6.4:34309537-34309556 | None:intergenic | 15.0% |
| !!! | ATTTTACACAAATATAGTAA+TGG | + | chr6.4:34310118-34310137 | MS.gene92601:intron | 15.0% |
| !!! | TTTGAATTTGTTTTAGATTA+GGG | + | chr6.4:34309449-34309468 | MS.gene92601:intron | 15.0% |
| !! | ACAACTAATGACAAAATTAT+AGG | - | chr6.4:34310792-34310811 | None:intergenic | 20.0% |
| !! | ACAATTTATAAAACCTCTAA+AGG | - | chr6.4:34311970-34311989 | None:intergenic | 20.0% |
| !! | ATCGTTTAATAATAGGAATT+TGG | - | chr6.4:34311618-34311637 | None:intergenic | 20.0% |
| !! | CACATTAAAACAAAAAAACA+TGG | - | chr6.4:34309196-34309215 | None:intergenic | 20.0% |
| !! | GTTATTATAATAAGTGCTTA+TGG | + | chr6.4:34308543-34308562 | MS.gene92601:intron | 20.0% |
| !! | TATAAAAATAAGATCAAGGT+AGG | - | chr6.4:34309533-34309552 | None:intergenic | 20.0% |
| !! | TATCAAAAACTAATATCTAG+TGG | + | chr6.4:34309356-34309375 | MS.gene92601:intron | 20.0% |
| !! | TATCTATTGTTAGGAAAATA+AGG | + | chr6.4:34311993-34312012 | MS.gene92601:intron | 20.0% |
| !! | TCGTTTAATAATAGGAATTT+GGG | - | chr6.4:34311617-34311636 | None:intergenic | 20.0% |
| !! | TGATTAAACATCTTATATCT+GGG | + | chr6.4:34310968-34310987 | MS.gene92601:intron | 20.0% |
| !! | TTGATTAAACATCTTATATC+TGG | + | chr6.4:34310967-34310986 | MS.gene92601:intron | 20.0% |
| !! | TTGTATTAAATAGCATATTG+CGG | + | chr6.4:34310023-34310042 | MS.gene92601:intron | 20.0% |
| !! | TTTGTGTAAAATTCACTAAA+TGG | - | chr6.4:34310110-34310129 | None:intergenic | 20.0% |
| !!! | ATATGACATGAATTATTTTG+AGG | + | chr6.4:34310747-34310766 | MS.gene92601:intron | 20.0% |
| !!! | CAAATTTCCAACAAATTTTT+TGG | - | chr6.4:34310236-34310255 | None:intergenic | 20.0% |
| !!! | CTAATCTAAAACAAATTCAA+AGG | - | chr6.4:34309450-34309469 | None:intergenic | 20.0% |
| !!! | CTTTGAATTTGTTTTAGATT+AGG | + | chr6.4:34309448-34309467 | MS.gene92601:intron | 20.0% |
| !!! | TAGTTACATGAAAATTTGTT+TGG | + | chr6.4:34309473-34309492 | MS.gene92601:intron | 20.0% |
| !!! | TGAAGTGAAAATTTCATTTT+TGG | + | chr6.4:34309125-34309144 | MS.gene92601:intron | 20.0% |
| !!! | TTGAATTTGTTTTAGATTAG+GGG | + | chr6.4:34309450-34309469 | MS.gene92601:intron | 20.0% |
| !!! | TTGAATTTTCTTTTAGCTTA+GGG | + | chr6.4:34308926-34308945 | MS.gene92601:intron | 20.0% |
| !!! | TTTGAATTTTCTTTTAGCTT+AGG | + | chr6.4:34308925-34308944 | MS.gene92601:intron | 20.0% |
| ! | AAATAAGTTGTTTAGCCAAA+CGG | - | chr6.4:34308504-34308523 | None:intergenic | 25.0% |
| ! | AACAACTTATTTGTAGCTTA+AGG | + | chr6.4:34308512-34308531 | MS.gene92601:intron | 25.0% |
| ! | AATTCATAAGTTCTCACAAA+CGG | - | chr6.4:34308381-34308400 | None:intergenic | 25.0% |
| ! | AATTGTCCTAGTAAAAATCT+TGG | + | chr6.4:34308131-34308150 | MS.gene92601:CDS | 25.0% |
| ! | AATTGTCGTTATCTATTGTT+AGG | + | chr6.4:34311984-34312003 | MS.gene92601:intron | 25.0% |
| ! | AATTTAAATGTGACCTTTAG+AGG | + | chr6.4:34311954-34311973 | MS.gene92601:intron | 25.0% |
| ! | ACCACATGTTAGTTAAATAA+AGG | + | chr6.4:34311858-34311877 | MS.gene92601:intron | 25.0% |
| ! | ACTAAACAGGGTTTAAATAA+AGG | - | chr6.4:34309401-34309420 | None:intergenic | 25.0% |
| ! | AGCAATACCAAAATCATTTA+AGG | - | chr6.4:34308473-34308492 | None:intergenic | 25.0% |
| ! | ATGTCAAATATCATCTATAG+TGG | - | chr6.4:34309999-34310018 | None:intergenic | 25.0% |
| ! | ATTAACTACACTCACTTTAT+TGG | - | chr6.4:34310418-34310437 | None:intergenic | 25.0% |
| ! | GCAATACCAAAATCATTTAA+GGG | - | chr6.4:34308472-34308491 | None:intergenic | 25.0% |
| ! | TAGTTACGACATAAATTATG+TGG | + | chr6.4:34308873-34308892 | MS.gene92601:intron | 25.0% |
| ! | TGCAATTAAAGCTACATATT+TGG | - | chr6.4:34308841-34308860 | None:intergenic | 25.0% |
| ! | TTAACATAAAAACCAGATCA+AGG | - | chr6.4:34309018-34309037 | None:intergenic | 25.0% |
| ! | TTAATAATAGGAATTTGGGA+CGG | - | chr6.4:34311613-34311632 | None:intergenic | 25.0% |
| ! | TTTCTGTATATTCTATAAGC+TGG | + | chr6.4:34308618-34308637 | MS.gene92601:intron | 25.0% |
| !! | ACGATTCGGAAAAAAATATT+TGG | + | chr6.4:34310878-34310897 | MS.gene92601:intron | 25.0% |
| !! | ATTTGTTTGGTTTAGTGAAT+TGG | + | chr6.4:34308963-34308982 | MS.gene92601:intron | 25.0% |
| !! | CTAAACCAAACAAATTTTCA+TGG | - | chr6.4:34308958-34308977 | None:intergenic | 25.0% |
| !! | CTTAAACATTTTATCTACAC+AGG | - | chr6.4:34309570-34309589 | None:intergenic | 25.0% |
| !! | TCAAAACCAAGATTTTTACT+AGG | - | chr6.4:34308140-34308159 | None:intergenic | 25.0% |
| !! | TCCTTTATTTAACTAACATG+TGG | - | chr6.4:34311862-34311881 | None:intergenic | 25.0% |
| !!! | AGTAAAAATCTTGGTTTTGA+TGG | + | chr6.4:34308140-34308159 | MS.gene92601:CDS | 25.0% |
| !!! | TGAATTTTCTTTTAGCTTAG+GGG | + | chr6.4:34308927-34308946 | MS.gene92601:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+AGG | + | chr6.4:34308446-34308465 | MS.gene92601:intron | 30.0% | |
| AATAAGTTGTTTAGCCAAAC+GGG | - | chr6.4:34308503-34308522 | None:intergenic | 30.0% | |
| ACCCGAATTGTATAAAAGTT+CGG | + | chr6.4:34311512-34311531 | MS.gene92601:intron | 30.0% | |
| ACCTACAAGATACAGAAAAA+TGG | - | chr6.4:34311043-34311062 | None:intergenic | 30.0% | |
| AGGTTGAACCAGTAAAAAAT+AGG | - | chr6.4:34308998-34309017 | None:intergenic | 30.0% | |
| AGGTTTACCAATATGTTCTA+TGG | + | chr6.4:34311260-34311279 | MS.gene92601:CDS | 30.0% | |
| ATAACTGAGTATCAGAGAAA+TGG | - | chr6.4:34310932-34310951 | None:intergenic | 30.0% | |
| ATAAGATTCTGTTGACGATT+CGG | + | chr6.4:34310864-34310883 | MS.gene92601:intron | 30.0% | |
| ATACAACCCATAGAACATAT+TGG | - | chr6.4:34311270-34311289 | None:intergenic | 30.0% | |
| ATCATGTATAGTCCTAAACA+AGG | - | chr6.4:34311412-34311431 | None:intergenic | 30.0% | |
| ATTGTCATCAATCTTGTGAT+TGG | + | chr6.4:34311091-34311110 | MS.gene92601:CDS | 30.0% | |
| CAAACACTTGACTGAATATT+AGG | + | chr6.4:34311649-34311668 | MS.gene92601:intron | 30.0% | |
| CATTAGCAACATAACTGTTA+GGG | + | chr6.4:34311334-34311353 | MS.gene92601:intron | 30.0% | |
| CTAATATTCAGTCAAGTGTT+TGG | - | chr6.4:34311651-34311670 | None:intergenic | 30.0% | |
| CTATTGTTAGGAAAATAAGG+TGG | + | chr6.4:34311996-34312015 | MS.gene92601:intron | 30.0% | |
| CTTGTACACATAAATTCATC+AGG | - | chr6.4:34310192-34310211 | None:intergenic | 30.0% | |
| GAGATTCATCTTAGTGAATT+GGG | - | chr6.4:34310632-34310651 | None:intergenic | 30.0% | |
| GCATGATTATCTACTAAACA+GGG | - | chr6.4:34309413-34309432 | None:intergenic | 30.0% | |
| GGTTTACCAATATGTTCTAT+GGG | + | chr6.4:34311261-34311280 | MS.gene92601:CDS | 30.0% | |
| GTATCTAATGTGTATCATTC+TGG | + | chr6.4:34310583-34310602 | MS.gene92601:intron | 30.0% | |
| GTTGTGACCAAAAAATTTGT+TGG | + | chr6.4:34310226-34310245 | MS.gene92601:intron | 30.0% | |
| TAACAGTTATGTTGCTAATG+AGG | - | chr6.4:34311334-34311353 | None:intergenic | 30.0% | |
| TAGAGAATCACACTTAAATG+TGG | + | chr6.4:34309292-34309311 | MS.gene92601:intron | 30.0% | |
| TATGTTATAGTACTTCGACT+TGG | + | chr6.4:34309041-34309060 | MS.gene92601:intron | 30.0% | |
| TCATGTATAGTCCTAAACAA+GGG | - | chr6.4:34311411-34311430 | None:intergenic | 30.0% | |
| TCATTAGCAACATAACTGTT+AGG | + | chr6.4:34311333-34311352 | MS.gene92601:intron | 30.0% | |
| TGCATGATTATCTACTAAAC+AGG | - | chr6.4:34309414-34309433 | None:intergenic | 30.0% | |
| TTACGACATAAATTATGTGG+TGG | + | chr6.4:34308876-34308895 | MS.gene92601:intron | 30.0% | |
| TTGGTTTAGTGAATTGGATT+TGG | + | chr6.4:34308969-34308988 | MS.gene92601:intron | 30.0% | |
| ! | ACCGAACTTTTATACAATTC+GGG | - | chr6.4:34311516-34311535 | None:intergenic | 30.0% |
| ! | ATTTGTTTGGTTCACTGAAT+TGG | + | chr6.4:34309486-34309505 | MS.gene92601:intron | 30.0% |
| ! | CACCGAACTTTTATACAATT+CGG | - | chr6.4:34311517-34311536 | None:intergenic | 30.0% |
| ! | CTTCACAGTTTGATTCTTTT+CGG | - | chr6.4:34311702-34311721 | None:intergenic | 30.0% |
| ! | CTTTTACCAAACTGTTGTAA+TGG | - | chr6.4:34311463-34311482 | None:intergenic | 30.0% |
| ! | GTTTAGGACTATACATGATT+CGG | + | chr6.4:34311413-34311432 | MS.gene92601:intron | 30.0% |
| ! | TGGTTCCATGAAAATTTGTT+TGG | + | chr6.4:34308950-34308969 | MS.gene92601:intron | 30.0% |
| !! | ACCATTTTTCTGTATCTTGT+AGG | + | chr6.4:34311039-34311058 | MS.gene92601:intron | 30.0% |
| !! | ATGATTTTGGTATTGCTTTC+AGG | + | chr6.4:34308476-34308495 | MS.gene92601:intron | 30.0% |
| !! | ATTAGATACTCGTATCGATT+AGG | - | chr6.4:34310572-34310591 | None:intergenic | 30.0% |
| !! | ATTTTAGTCGAAAACTGTCA+TGG | + | chr6.4:34309246-34309265 | MS.gene92601:intron | 30.0% |
| !! | TTTTGAAGGCTAACAAAGAT+GGG | + | chr6.4:34309717-34309736 | MS.gene92601:intron | 30.0% |
| !! | TTTTTGAAGGCTAACAAAGA+TGG | + | chr6.4:34309716-34309735 | MS.gene92601:intron | 30.0% |
| !!! | CTTGTGTTTTGAAGTTTCTT+GGG | + | chr6.4:34308165-34308184 | MS.gene92601:CDS | 30.0% |
| AAACCTTGTACTTAGACTTG+AGG | - | chr6.4:34311246-34311265 | None:intergenic | 35.0% | |
| AAATCATTTAAGGGCCTGTT+TGG | - | chr6.4:34308463-34308482 | None:intergenic | 35.0% | |
| ACACTTAAATGTGGTTGTTG+TGG | + | chr6.4:34309301-34309320 | MS.gene92601:intron | 35.0% | |
| ACTCCAGTTTGTGATAAGTT+CGG | - | chr6.4:34310388-34310407 | None:intergenic | 35.0% | |
| ACTGAACCATTACAACAGTT+TGG | + | chr6.4:34311454-34311473 | MS.gene92601:intron | 35.0% | |
| ACTGTTGTAATGGTTCAGTT+TGG | - | chr6.4:34311453-34311472 | None:intergenic | 35.0% | |
| AGCAAAGGATTCTCTTTCAA+AGG | - | chr6.4:34308206-34308225 | None:intergenic | 35.0% | |
| ATAAGTTGTTTAGCCAAACG+GGG | - | chr6.4:34308502-34308521 | None:intergenic | 35.0% | |
| ATTCGCCTTGAACAACAATT+TGG | + | chr6.4:34309861-34309880 | MS.gene92601:CDS | 35.0% | |
| CATGTGTTCCAACTTCTAAA+TGG | + | chr6.4:34312177-34312196 | MS.gene92601:CDS | 35.0% | |
| CGAAAAGAATCAAACTGTGA+AGG | + | chr6.4:34311700-34311719 | MS.gene92601:intron | 35.0% | |
| CGAGATTCATCTTAGTGAAT+TGG | - | chr6.4:34310633-34310652 | None:intergenic | 35.0% | |
| CTGAAAAGACTAAACTGTGA+CGG | - | chr6.4:34311764-34311783 | None:intergenic | 35.0% | |
| GCATGATATCTTGTGTAGTA+CGG | + | chr6.4:34309642-34309661 | MS.gene92601:intron | 35.0% | |
| GGTAAAAGCTGAACTGTTAA+TGG | + | chr6.4:34311475-34311494 | MS.gene92601:intron | 35.0% | |
| GTTAGCAGTAAAAGTAGTTC+AGG | - | chr6.4:34311566-34311585 | None:intergenic | 35.0% | |
| GTTTACCTAGTATCTGGATT+TGG | + | chr6.4:34310273-34310292 | MS.gene92601:CDS | 35.0% | |
| GTTTAGTGAATTGGATTTGG+AGG | + | chr6.4:34308972-34308991 | MS.gene92601:intron | 35.0% | |
| TAGTACGGTAGCATAGATTT+AGG | + | chr6.4:34309657-34309676 | MS.gene92601:intron | 35.0% | |
| TATTTGTAGCTTAAGGCACA+AGG | + | chr6.4:34308519-34308538 | MS.gene92601:intron | 35.0% | |
| TCGCATTTCCATTTAGAAGT+TGG | - | chr6.4:34312188-34312207 | None:intergenic | 35.0% | |
| TTCGCCTTGAACAACAATTT+GGG | + | chr6.4:34309862-34309881 | MS.gene92601:CDS | 35.0% | |
| TTGAAAGAGAATCCTTTGCT+TGG | + | chr6.4:34308206-34308225 | MS.gene92601:CDS | 35.0% | |
| TTGAATGGTAGGTTATCCAT+TGG | + | chr6.4:34312092-34312111 | MS.gene92601:intron | 35.0% | |
| TTGGTTCACTGAATTGGATA+TGG | + | chr6.4:34309492-34309511 | MS.gene92601:intron | 35.0% | |
| TTTCCGAACTTATCACAAAC+TGG | + | chr6.4:34310382-34310401 | MS.gene92601:CDS | 35.0% | |
| TTTGTTGGAAATTTGCAGTG+AGG | + | chr6.4:34310241-34310260 | MS.gene92601:intron | 35.0% | |
| ! | AAAGTAGTTCAGGTTAGGTT+CGG | - | chr6.4:34311556-34311575 | None:intergenic | 35.0% |
| ! | AACAGGCCCTTAAATGATTT+TGG | + | chr6.4:34308463-34308482 | MS.gene92601:intron | 35.0% |
| ! | CACTGTATTCGTTTGTTGAA+TGG | + | chr6.4:34312077-34312096 | MS.gene92601:intron | 35.0% |
| ! | CAGTAAAAGTAGTTCAGGTT+AGG | - | chr6.4:34311561-34311580 | None:intergenic | 35.0% |
| ! | CTTGAACAACAATTTGGGTT+CGG | + | chr6.4:34309867-34309886 | MS.gene92601:CDS | 35.0% |
| ! | GTATTCGTTTGTTGAATGGT+AGG | + | chr6.4:34312081-34312100 | MS.gene92601:intron | 35.0% |
| ! | TAAACCAGTAACCCTTGTTT+AGG | + | chr6.4:34311397-34311416 | MS.gene92601:intron | 35.0% |
| ! | TGGTTTAACGGTTCTGTTTT+TGG | + | chr6.4:34311791-34311810 | MS.gene92601:intron | 35.0% |
| ! | TTCAGTGCAGTTTGGTTTAA+CGG | + | chr6.4:34311779-34311798 | MS.gene92601:intron | 35.0% |
| !! | AATTCAAAGGCACTTCTACT+AGG | - | chr6.4:34309437-34309456 | None:intergenic | 35.0% |
| !! | ATTAGAAAAAGCATCTCCGT+TGG | + | chr6.4:34310321-34310340 | MS.gene92601:CDS | 35.0% |
| !! | TTAGTCTTTTCAGTGCAGTT+TGG | + | chr6.4:34311771-34311790 | MS.gene92601:intron | 35.0% |
| !!! | ATTTTCTTTTAGCTTAGGGG+TGG | + | chr6.4:34308930-34308949 | MS.gene92601:intron | 35.0% |
| !!! | GCTTGTGTTTTGAAGTTTCT+TGG | + | chr6.4:34308164-34308183 | MS.gene92601:CDS | 35.0% |
| !!! | TTCACGAGTTCAGTTTTGTT+CGG | - | chr6.4:34311738-34311757 | None:intergenic | 35.0% |
| !!! | TTTGGAGGCCTATTTTTTAC+TGG | + | chr6.4:34308987-34309006 | MS.gene92601:intron | 35.0% |
| AACCCTTACGTTTCAGAAGA+AGG | - | chr6.4:34308233-34308252 | None:intergenic | 40.0% | |
| ACAAATAAGCCAATCCAGAC+AGG | + | chr6.4:34308753-34308772 | MS.gene92601:intron | 40.0% | |
| ACACGCTGGAATCATTCATT+TGG | + | chr6.4:34309806-34309825 | MS.gene92601:CDS | 40.0% | |
| ATAGTGGCACTAAAGTGTAG+CGG | - | chr6.4:34309983-34310002 | None:intergenic | 40.0% | |
| ATATCTAGTGGCCTAGATTG+CGG | + | chr6.4:34309368-34309387 | MS.gene92601:intron | 40.0% | |
| ATTCGAGAAAGGAACTTACC+AGG | - | chr6.4:34311311-34311330 | None:intergenic | 40.0% | |
| ATTTAAGGGCCTGTTTGGAT+TGG | - | chr6.4:34308458-34308477 | None:intergenic | 40.0% | |
| CACAGAGCGATAATTAGACA+TGG | - | chr6.4:34310456-34310475 | None:intergenic | 40.0% | |
| CCTTTCAGTGTCGTCAATTA+CGG | + | chr6.4:34309928-34309947 | MS.gene92601:intron | 40.0% | |
| CTAACCAACCAAATTGAGGA+CGG | - | chr6.4:34311195-34311214 | None:intergenic | 40.0% | |
| CTTTAATTGCAATCGCACTC+TGG | + | chr6.4:34308850-34308869 | MS.gene92601:intron | 40.0% | |
| CTTTAATTGTAGACGCGCTT+TGG | + | chr6.4:34309324-34309343 | MS.gene92601:intron | 40.0% | |
| GACAATTTCGCTCATATTGG+CGG | + | chr6.4:34311130-34311149 | MS.gene92601:CDS | 40.0% | |
| GGAATCGTTTACCTAGTATC+TGG | + | chr6.4:34310267-34310286 | MS.gene92601:CDS | 40.0% | |
| GGTAAATAAGCTTTGCAGAC+AGG | - | chr6.4:34310171-34310190 | None:intergenic | 40.0% | |
| GTCGACAATTTCGCTCATAT+TGG | + | chr6.4:34311127-34311146 | MS.gene92601:CDS | 40.0% | |
| TAACCAACCAAATTGAGGAC+GGG | - | chr6.4:34311194-34311213 | None:intergenic | 40.0% | |
| TACCTAGTATCTGGATTTGG+TGG | + | chr6.4:34310276-34310295 | MS.gene92601:CDS | 40.0% | |
| TAGAAGTTGGAACACATGTC+AGG | - | chr6.4:34312175-34312194 | None:intergenic | 40.0% | |
| TAGTCCTAAACAAGGGTTAC+TGG | - | chr6.4:34311404-34311423 | None:intergenic | 40.0% | |
| TCCCTCTACTTTACTGAACA+AGG | - | chr6.4:34311365-34311384 | None:intergenic | 40.0% | |
| TCTACTCGCATAAGTGTACT+GGG | - | chr6.4:34308728-34308747 | None:intergenic | 40.0% | |
| TGCTAATGAGGATTCGAGAA+AGG | - | chr6.4:34311322-34311341 | None:intergenic | 40.0% | |
| TGGAAATTTGCAGTGAGGAT+AGG | + | chr6.4:34310246-34310265 | MS.gene92601:intron | 40.0% | |
| TGTGATAAGTTCGGAAAGCA+TGG | - | chr6.4:34310379-34310398 | None:intergenic | 40.0% | |
| TGTTCAGTAAAGTAGAGGGA+GGG | + | chr6.4:34311365-34311384 | MS.gene92601:intron | 40.0% | |
| TTACGGATCGGTGAAAATAG+CGG | + | chr6.4:34309945-34309964 | MS.gene92601:intron | 40.0% | |
| TTGTGAATCATCACCAAGGA+TGG | + | chr6.4:34309760-34309779 | MS.gene92601:CDS | 40.0% | |
| TTGTTCAGTAAAGTAGAGGG+AGG | + | chr6.4:34311364-34311383 | MS.gene92601:intron | 40.0% | |
| ! | AAGAAGTCCAAAAAGAGCAC+CGG | - | chr6.4:34310352-34310371 | None:intergenic | 40.0% |
| ! | ACCTAGTATCTGGATTTGGT+GGG | + | chr6.4:34310277-34310296 | MS.gene92601:CDS | 40.0% |
| ! | ATGATCAGTCTGGTCTTCAT+TGG | + | chr6.4:34309837-34309856 | MS.gene92601:CDS | 40.0% |
| ! | CGAACCCAAATTGTTGTTCA+AGG | - | chr6.4:34309869-34309888 | None:intergenic | 40.0% |
| ! | GCCTTGTTCAGTAAAGTAGA+GGG | + | chr6.4:34311361-34311380 | MS.gene92601:intron | 40.0% |
| ! | TTGGATTCACGCTTTGAATC+TGG | + | chr6.4:34310897-34310916 | MS.gene92601:intron | 40.0% |
| !! | AGCCTTGTTCAGTAAAGTAG+AGG | + | chr6.4:34311360-34311379 | MS.gene92601:intron | 40.0% |
| !! | ATACATGATTCGGTTCAGGT+AGG | + | chr6.4:34311423-34311442 | MS.gene92601:intron | 40.0% |
| !! | GACTATACATGATTCGGTTC+AGG | + | chr6.4:34311419-34311438 | MS.gene92601:intron | 40.0% |
| !! | GTCCTTCTTCTGAAACGTAA+GGG | + | chr6.4:34308228-34308247 | MS.gene92601:intron | 40.0% |
| !! | TGTATAAAAGTTCGGTGCAC+CGG | + | chr6.4:34311520-34311539 | MS.gene92601:intron | 40.0% |
| !! | TTACTGGTTCAACCTTGATC+TGG | + | chr6.4:34309003-34309022 | MS.gene92601:intron | 40.0% |
| AAAGATGGGAGCCCTTAAGT+GGG | + | chr6.4:34309731-34309750 | MS.gene92601:CDS | 45.0% | |
| AAATTATGTGGTGGCCCAGA+TGG | + | chr6.4:34308885-34308904 | MS.gene92601:intron | 45.0% | |
| AACCAACCAAATTGAGGACG+GGG | - | chr6.4:34311193-34311212 | None:intergenic | 45.0% | |
| AACCAAGGAGAAATCCTGTC+AGG | - | chr6.4:34311159-34311178 | None:intergenic | 45.0% | |
| ACCAGTGTTGTCAAATAGCG+AGG | - | chr6.4:34310086-34310105 | None:intergenic | 45.0% | |
| ACTCGCGTTATAACACGAGT+TGG | - | chr6.4:34311827-34311846 | None:intergenic | 45.0% | |
| ATAGCGAGGCTATAGTGAAG+CGG | - | chr6.4:34310072-34310091 | None:intergenic | 45.0% | |
| ATGAGACAAGTCTCCATCCT+TGG | - | chr6.4:34309776-34309795 | None:intergenic | 45.0% | |
| ATGTCAGGTAGTGACACCAA+TGG | - | chr6.4:34312160-34312179 | None:intergenic | 45.0% | |
| CACAACAGCATCCCACTTAA+GGG | - | chr6.4:34309745-34309764 | None:intergenic | 45.0% | |
| CAGTGTCGTCAATTACGGAT+CGG | + | chr6.4:34309933-34309952 | MS.gene92601:intron | 45.0% | |
| CCGTAATTGACGACACTGAA+AGG | - | chr6.4:34309931-34309950 | None:intergenic | 45.0% | |
| GCTGTTGTGAATCATCACCA+AGG | + | chr6.4:34309756-34309775 | MS.gene92601:CDS | 45.0% | |
| GGAGACTTGTCTCATGCATT+TGG | + | chr6.4:34309781-34309800 | MS.gene92601:CDS | 45.0% | |
| GGGGAAGGAAAATGAAACCA+AGG | - | chr6.4:34311174-34311193 | None:intergenic | 45.0% | |
| GTCTACTCGCATAAGTGTAC+TGG | - | chr6.4:34308729-34308748 | None:intergenic | 45.0% | |
| TAATCACGACGCAGCTATGA+TGG | - | chr6.4:34308790-34308809 | None:intergenic | 45.0% | |
| TAGGTTCGGAAACACAGAAC+CGG | - | chr6.4:34311542-34311561 | None:intergenic | 45.0% | |
| TCACAACAGCATCCCACTTA+AGG | - | chr6.4:34309746-34309765 | None:intergenic | 45.0% | |
| TCAGAAGAAGGACCAAGCAA+AGG | - | chr6.4:34308221-34308240 | None:intergenic | 45.0% | |
| TCATGCATTTGGTTACACGC+TGG | + | chr6.4:34309792-34309811 | MS.gene92601:CDS | 45.0% | |
| TCCCACCAAATCCAGATACT+AGG | - | chr6.4:34310281-34310300 | None:intergenic | 45.0% | |
| TCGCCTCAAGTCTAAGTACA+AGG | + | chr6.4:34311240-34311259 | MS.gene92601:CDS | 45.0% | |
| TGAGCGAAATTGTCGACATG+TGG | - | chr6.4:34311124-34311143 | None:intergenic | 45.0% | |
| TGCGCTAACCAACCAAATTG+AGG | - | chr6.4:34311199-34311218 | None:intergenic | 45.0% | |
| TGGGACGGTTCAGTTCAAAA+AGG | - | chr6.4:34311598-34311617 | None:intergenic | 45.0% | |
| TTCCTGACAGGATTTCTCCT+TGG | + | chr6.4:34311154-34311173 | MS.gene92601:CDS | 45.0% | |
| ! | CTCTCGTACTATTGATTGCC+TGG | + | chr6.4:34311290-34311309 | MS.gene92601:CDS | 45.0% |
| ! | GGTGCTCTTTTTGGACTTCT+TGG | + | chr6.4:34310351-34310370 | MS.gene92601:CDS | 45.0% |
| !! | GGTCCTTCTTCTGAAACGTA+AGG | + | chr6.4:34308227-34308246 | MS.gene92601:intron | 45.0% |
| AACCAAATTGAGGACGGGGA+AGG | - | chr6.4:34311189-34311208 | None:intergenic | 50.0% | |
| AAGGTTAGCGACCGCAATCT+AGG | - | chr6.4:34309382-34309401 | None:intergenic | 50.0% | |
| ATGCTATTGCGGGGTGAAAG+CGG | + | chr6.4:34312122-34312141 | MS.gene92601:CDS | 50.0% | |
| CAAAGATGGGAGCCCTTAAG+TGG | + | chr6.4:34309730-34309749 | MS.gene92601:CDS | 50.0% | |
| GCCTCGCTATTTGACAACAC+TGG | + | chr6.4:34310082-34310101 | MS.gene92601:intron | 50.0% | |
| GGCAGCAAACATGATCAGTC+TGG | + | chr6.4:34309827-34309846 | MS.gene92601:CDS | 50.0% | |
| TATTGCTTTCAGGCCCCGTT+TGG | + | chr6.4:34308486-34308505 | MS.gene92601:intron | 50.0% | |
| TTCCCCGTCCTCAATTTGGT+TGG | + | chr6.4:34311188-34311207 | MS.gene92601:CDS | 50.0% | |
| TTCCTTCCCCGTCCTCAATT+TGG | + | chr6.4:34311184-34311203 | MS.gene92601:CDS | 50.0% | |
| ! | TCCAACTAGCCTGTCTGGAT+TGG | - | chr6.4:34308765-34308784 | None:intergenic | 50.0% |
| ! | TGGTTTCCAACTAGCCTGTC+TGG | - | chr6.4:34308770-34308789 | None:intergenic | 50.0% |
| !! | CATATTGGCGGATTCCTGAC+AGG | + | chr6.4:34311142-34311161 | MS.gene92601:CDS | 50.0% |
| AAAGGTTCGCGACCACCATC+TGG | - | chr6.4:34308903-34308922 | None:intergenic | 55.0% | |
| AAGGTTCGCGACCACCATCT+GGG | - | chr6.4:34308902-34308921 | None:intergenic | 55.0% | |
| GCCAATCCAGACAGGCTAGT+TGG | + | chr6.4:34308761-34308780 | MS.gene92601:intron | 55.0% | |
| GGTAGTGACACCAATGGCAG+TGG | - | chr6.4:34312154-34312173 | None:intergenic | 55.0% | |
| TTATGTGGTGGCCCAGATGG+TGG | + | chr6.4:34308888-34308907 | MS.gene92601:intron | 55.0% | |
| ! | AGCATCTCCGTTGGTGCTTC+CGG | + | chr6.4:34310330-34310349 | MS.gene92601:CDS | 55.0% |
| ! | GGTGCTTCCGGTGCTCTTTT+TGG | + | chr6.4:34310342-34310361 | MS.gene92601:CDS | 55.0% |
| !! | AAGAGCACCGGAAGCACCAA+CGG | - | chr6.4:34310340-34310359 | None:intergenic | 55.0% |
| GACTTGAGGCGAACACCAGC+AGG | - | chr6.4:34311232-34311251 | None:intergenic | 60.0% | |
| GCGGATACGACCACTGCCAT+TGG | + | chr6.4:34312141-34312160 | MS.gene92601:CDS | 60.0% | |
| GCGCAGCGACATGTTCCTGC+TGG | + | chr6.4:34311214-34311233 | MS.gene92601:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 34308119 | 34312217 | 34308119 | ID=MS.gene92601 |
| chr6.4 | mRNA | 34308119 | 34312217 | 34308119 | ID=MS.gene92601.t1;Parent=MS.gene92601 |
| chr6.4 | exon | 34308119 | 34308243 | 34308119 | ID=MS.gene92601.t1.exon1;Parent=MS.gene92601.t1 |
| chr6.4 | CDS | 34308119 | 34308243 | 34308119 | ID=cds.MS.gene92601.t1;Parent=MS.gene92601.t1 |
| chr6.4 | exon | 34309725 | 34309888 | 34309725 | ID=MS.gene92601.t1.exon2;Parent=MS.gene92601.t1 |
| chr6.4 | CDS | 34309725 | 34309888 | 34309725 | ID=cds.MS.gene92601.t1;Parent=MS.gene92601.t1 |
| chr6.4 | exon | 34310259 | 34310422 | 34310259 | ID=MS.gene92601.t1.exon3;Parent=MS.gene92601.t1 |
| chr6.4 | CDS | 34310259 | 34310422 | 34310259 | ID=cds.MS.gene92601.t1;Parent=MS.gene92601.t1 |
| chr6.4 | exon | 34311061 | 34311311 | 34311061 | ID=MS.gene92601.t1.exon4;Parent=MS.gene92601.t1 |
| chr6.4 | CDS | 34311061 | 34311311 | 34311061 | ID=cds.MS.gene92601.t1;Parent=MS.gene92601.t1 |
| chr6.4 | exon | 34312103 | 34312217 | 34312103 | ID=MS.gene92601.t1.exon5;Parent=MS.gene92601.t1 |
| chr6.4 | CDS | 34312103 | 34312217 | 34312103 | ID=cds.MS.gene92601.t1;Parent=MS.gene92601.t1 |
| Gene Sequence |
| Protein sequence |
