AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92940.t1 MTR_7g111590 99.517 207 1 0 1 207 1 207 4.33e-152 420
MS.gene92940.t1 MTR_5g026750 99.034 207 2 0 1 207 1 207 2.15e-151 418
MS.gene92940.t1 MTR_1g022165 98.068 207 4 0 1 207 1 207 4.29e-150 415
MS.gene92940.t1 MTR_7g111590 98.551 207 1 1 1 207 1 205 1.17e-148 411
MS.gene92940.t1 MTR_8g071810 65.432 81 28 0 104 184 67 147 7.39e-28 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92940.t1 AT3G49010 87.435 191 24 0 2 192 1 191 2.80e-126 355
MS.gene92940.t1 AT3G49010 87.435 191 24 0 2 192 1 191 2.80e-126 355
MS.gene92940.t1 AT3G49010 87.435 191 24 0 2 192 1 191 2.80e-126 355
MS.gene92940.t1 AT3G49010 87.435 191 24 0 2 192 1 191 2.80e-126 355
MS.gene92940.t1 AT3G49010 87.435 191 24 0 2 192 1 191 2.80e-126 355
MS.gene92940.t1 AT3G49010 86.387 191 24 1 2 192 1 189 4.72e-123 347
MS.gene92940.t1 AT5G23900 85.484 186 27 0 2 187 1 186 1.67e-119 338
MS.gene92940.t1 AT3G48960 77.083 192 44 0 2 193 1 192 5.47e-109 311
MS.gene92940.t1 AT3G49010 61.257 191 21 1 2 192 1 138 4.02e-78 231

Find 59 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGTTTCATGTTGTATTTC+TGG 0.038558 5.4:+17671482 None:intergenic
AGATGAAATGAAGGCATTTA+AGG 0.173990 5.4:-17670155 MS.gene92940:CDS
CGTCTTCTTGTCTTTCTTGC+AGG 0.232556 5.4:+17671711 None:intergenic
TAGTTTCATGTTGTATTTCT+GGG 0.262590 5.4:+17671483 None:intergenic
TCGCCGCAAGAACCGATCTT+TGG 0.321210 5.4:-17670502 MS.gene92940:CDS
TTGACCTTGCGTGCACGTCT+TGG 0.342253 5.4:+17670420 None:intergenic
GCGAACAAACAAACGCCATT+TGG 0.357834 5.4:-17670110 MS.gene92940:CDS
CGAACAAACAAACGCCATTT+GGG 0.361720 5.4:-17670109 MS.gene92940:CDS
TGACCTTGCGTGCACGTCTT+GGG 0.387927 5.4:+17670421 None:intergenic
TGGGTCTGTCCATGAACAAT+AGG 0.402566 5.4:+17671502 None:intergenic
CCTCTCAGGCCTATTGTTCA+TGG 0.403035 5.4:-17671511 MS.gene92940:CDS
CTCGGCAGCCCTCTTCAGTC+TGG 0.408929 5.4:+17670084 None:intergenic
AGAGGTCCAGCTGTAGGCCT+TGG 0.411701 5.4:+17671529 None:intergenic
AGAAATACAACATGAAACTA+AGG 0.423714 5.4:-17671480 MS.gene92940:CDS
CTTCTCCCTTGAGGAGTTGA+AGG 0.436371 5.4:-17671446 MS.gene92940:intron
GTAGCATTTGCTAGTTCCTC+AGG 0.441712 5.4:+17670244 None:intergenic
TGCTTACGGAAGTGTTCGTT+AGG 0.456415 5.4:+17671768 None:intergenic
TCTTCAGTCTGGCACCCAAA+TGG 0.461938 5.4:+17670095 None:intergenic
GGCCTACAGCTGGACCTCTC+AGG 0.464622 5.4:-17671525 MS.gene92940:CDS
GATGGCTTCTCCCTCACAAT+TGG 0.470493 5.4:+17670199 None:intergenic
GAGGGCTGCCGAGGCAGAGA+AGG 0.474906 5.4:-17670074 MS.gene92940:CDS
CTTGTCTTCCTTCTCTGCCT+CGG 0.482926 5.4:+17670066 None:intergenic
TTCTTGTCTTTCTTGCAGGT+TGG 0.486579 5.4:+17671715 None:intergenic
TAAGATTACAGATGAAATGA+AGG 0.490511 5.4:-17670164 MS.gene92940:CDS
GAGGTCCAGCTGTAGGCCTT+GGG 0.492897 5.4:+17671530 None:intergenic
CTTGCAGACCTTCCAAAGAT+CGG 0.495670 5.4:+17670490 None:intergenic
TTATTTACAATGTAGGCTGC+AGG 0.497862 5.4:-17670570 MS.gene92940:intron
GCAAATGCTACACAGGTTCA+AGG 0.515568 5.4:-17670232 MS.gene92940:CDS
TCGACAGAAATGCCGATAGT+TGG 0.527583 5.4:+17670528 None:intergenic
AGAAAGACAAGAAGACGCTT+AGG 0.531399 5.4:-17671705 MS.gene92940:intron
TTCTTCAGCTCGTCAGAAGA+AGG 0.532934 5.4:-17671566 MS.gene92940:intron
ATGAAACTAAGGGCTGGTAA+AGG 0.560135 5.4:-17671469 MS.gene92940:CDS
AAGACGTGCACGCAAGGTCA+AGG 0.565249 5.4:-17670418 MS.gene92940:intron
TACAACATGAAACTAAGGGC+TGG 0.568361 5.4:-17671475 MS.gene92940:CDS
CTTCCCAAGACGTGCACGCA+AGG 0.568390 5.4:-17670424 MS.gene92940:CDS
TTCATACTTACCAATTGTGA+GGG 0.574179 5.4:-17670209 MS.gene92940:CDS
CAGACTGAAGAGGGCTGCCG+AGG 0.574750 5.4:-17670083 MS.gene92940:CDS
CGCAAGAACCGATCTTTGGA+AGG 0.577563 5.4:-17670498 MS.gene92940:CDS
GTCTGCAAGCCAACGTGCAG+AGG 0.583501 5.4:-17670476 MS.gene92940:CDS
TGGTAAAGGCTTCTCCCTTG+AGG 0.585769 5.4:-17671455 MS.gene92940:CDS
TCTTGGGAAGACTACCAACT+TGG 0.587079 5.4:+17670437 None:intergenic
GAAGACATACAAGGCCAAGT+TGG 0.587284 5.4:-17670451 MS.gene92940:CDS
CTTCCAAAGATCGGTTCTTG+CGG 0.587526 5.4:+17670499 None:intergenic
GTTCATACTTACCAATTGTG+AGG 0.591073 5.4:-17670210 MS.gene92940:CDS
ACGAACACTTCCGTAAGCAC+TGG 0.592021 5.4:-17671764 MS.gene92940:CDS
ATTTGGGTGCCAGACTGAAG+AGG 0.592370 5.4:-17670093 MS.gene92940:CDS
GGCTGGTGATTCCACTCCTG+AGG 0.595885 5.4:-17670260 MS.gene92940:CDS
GAAATACAACATGAAACTAA+GGG 0.596413 5.4:-17671479 MS.gene92940:CDS
ATCTTAACAAGCTCTACAGA+TGG 0.608105 5.4:+17670181 None:intergenic
TTTGGGTGCCAGACTGAAGA+GGG 0.608247 5.4:-17670092 MS.gene92940:CDS
ATTTGCTAGTTCCTCAGGAG+TGG 0.614969 5.4:+17670249 None:intergenic
TGTCTTCAGCCTCTGCACGT+TGG 0.625495 5.4:+17670467 None:intergenic
GCTTACGGAAGTGTTCGTTA+GGG 0.630904 5.4:+17671769 None:intergenic
GGAACTAGCAAATGCTACAC+AGG 0.641783 5.4:-17670239 MS.gene92940:CDS
GGCAAAACTATGTTAAGACA+TGG 0.642371 5.4:-17671743 MS.gene92940:CDS
GGCCTGAGAGGTCCAGCTGT+AGG 0.645171 5.4:+17671523 None:intergenic
CCATGAACAATAGGCCTGAG+AGG 0.663723 5.4:+17671511 None:intergenic
GCAGAGGCTGAAGACATACA+AGG 0.685449 5.4:-17670460 MS.gene92940:CDS
TTCAGCTCGTCAGAAGAAGG+CGG 0.701987 5.4:-17671563 MS.gene92940:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAACTCAATTAAAT+TGG + chr5.4:17670768-17670787 None:intergenic 10.0%
!!! TTTAATTGAGTTTTTTTTTA+AGG - chr5.4:17670769-17670788 MS.gene92940:intron 10.0%
!!! TTTGATTTATTTGATATAAT+GGG - chr5.4:17670255-17670274 MS.gene92940:CDS 10.0%
!!! TTTTGATTTATTTGATATAA+TGG - chr5.4:17670254-17670273 MS.gene92940:CDS 10.0%
!!! AGTTATATGCTTTTAATATA+TGG - chr5.4:17671471-17671490 MS.gene92940:CDS 15.0%
!!! TTCTATTTTATTTACAATGT+AGG - chr5.4:17671275-17671294 MS.gene92940:intron 15.0%
!! AAATTAGACAGAATTGAATA+TGG + chr5.4:17671127-17671146 None:intergenic 20.0%
!! GCATTATTCTTAATTTCTTA+TGG - chr5.4:17671551-17671570 MS.gene92940:CDS 20.0%
!!! AAACTAAAGTTGATTTTTGA+TGG + chr5.4:17670894-17670913 None:intergenic 20.0%
! AAATTGCAAGTCACTAAAAT+CGG - chr5.4:17670574-17670593 MS.gene92940:intron 25.0%
! AAGAAATAAACCATCGAAAA+AGG + chr5.4:17671250-17671269 None:intergenic 25.0%
! AGAAATACAACATGAAACTA+AGG - chr5.4:17670372-17670391 MS.gene92940:intron 25.0%
! ATAGATAAAAACACTCCATA+TGG + chr5.4:17670733-17670752 None:intergenic 25.0%
! GAAATACAACATGAAACTAA+GGG - chr5.4:17670373-17670392 MS.gene92940:intron 25.0%
! TAAGATTACAGATGAAATGA+AGG - chr5.4:17671688-17671707 MS.gene92940:intron 25.0%
! TAGTTTCATGTTGTATTTCT+GGG + chr5.4:17670372-17670391 None:intergenic 25.0%
! TGGTAGCAAAATTAAGAAAA+AGG + chr5.4:17671497-17671516 None:intergenic 25.0%
! TTAGTTTCATGTTGTATTTC+TGG + chr5.4:17670373-17670392 None:intergenic 25.0%
!!! ACAACTAAAGTTGATTTTGA+TGG + chr5.4:17670935-17670954 None:intergenic 25.0%
!!! TATGGAGTGTTTTTATCTAT+AGG - chr5.4:17670733-17670752 MS.gene92940:intron 25.0%
!!! TTTTACTTTACCTTTTTCGA+TGG - chr5.4:17671237-17671256 MS.gene92940:intron 25.0%
!!! TTTTTTTTAAGGTCTATGTC+TGG - chr5.4:17670780-17670799 MS.gene92940:intron 25.0%
AAGAAATCATGGATCATACA+AGG + chr5.4:17671013-17671032 None:intergenic 30.0%
AATTCCTGTACATCAATACA+TGG - chr5.4:17670644-17670663 MS.gene92940:intron 30.0%
AGATCACAACTGAGAATATT+CGG + chr5.4:17671101-17671120 None:intergenic 30.0%
AGCAATTCACTAAACTACAT+CGG + chr5.4:17670471-17670490 None:intergenic 30.0%
CGTTGCTGATAAATTTGTAA+AGG - chr5.4:17671518-17671537 MS.gene92940:CDS 30.0%
GATAAAAGAGTAAAAGACCT+TGG - chr5.4:17671159-17671178 MS.gene92940:intron 30.0%
GTGTATAAGCAAAGAAATCA+TGG + chr5.4:17671024-17671043 None:intergenic 30.0%
TACAAATTTATCAGCAACGA+TGG + chr5.4:17671517-17671536 None:intergenic 30.0%
TCGGAAAATCAAAATCACAT+AGG + chr5.4:17670452-17670471 None:intergenic 30.0%
TTCATACTTACCAATTGTGA+GGG - chr5.4:17671643-17671662 MS.gene92940:intron 30.0%
! AAATCCATGTATTGATGTAC+AGG + chr5.4:17670651-17670670 None:intergenic 30.0%
!! AGATGAAATGAAGGCATTTA+AGG - chr5.4:17671697-17671716 MS.gene92940:intron 30.0%
!! ATAGTGTTTTCACTTTTCAG+TGG + chr5.4:17671048-17671067 None:intergenic 30.0%
AAATCATGGATCATACAAGG+AGG + chr5.4:17671010-17671029 None:intergenic 35.0%
ATCTTAACAAGCTCTACAGA+TGG + chr5.4:17671674-17671693 None:intergenic 35.0%
CAGCCTGGAAATATAAAACA+GGG + chr5.4:17671577-17671596 None:intergenic 35.0%
GGCAAAACTATGTTAAGACA+TGG - chr5.4:17670109-17670128 MS.gene92940:CDS 35.0%
GTTCATACTTACCAATTGTG+AGG - chr5.4:17671642-17671661 MS.gene92940:intron 35.0%
TAAAAACACTCCATATGGAC+AGG + chr5.4:17670728-17670747 None:intergenic 35.0%
TATGTCTGGCATTAATCGTA+TGG - chr5.4:17670794-17670813 MS.gene92940:intron 35.0%
TTATTTACAATGTAGGCTGC+AGG - chr5.4:17671282-17671301 MS.gene92940:intron 35.0%
! AAAAAGCTTGCTCCAACTAT+CGG - chr5.4:17671312-17671331 MS.gene92940:intron 35.0%
! ATAGTTGGAGCAAGCTTTTT+GGG + chr5.4:17671312-17671331 None:intergenic 35.0%
! ATTTTACCTTCAACTCCTCA+AGG + chr5.4:17670415-17670434 None:intergenic 35.0%
! TTTTACCTTCAACTCCTCAA+GGG + chr5.4:17670414-17670433 None:intergenic 35.0%
!!! AACTGGTTTTGATGCTCTTT+TGG - chr5.4:17670517-17670536 MS.gene92940:CDS 35.0%
ACCATCAAGGTTTAGGTCTA+TGG - chr5.4:17670832-17670851 MS.gene92940:intron 40.0%
AGAAAGACAAGAAGACGCTT+AGG - chr5.4:17670147-17670166 MS.gene92940:CDS 40.0%
CCAGCCTGGAAATATAAAAC+AGG + chr5.4:17671578-17671597 None:intergenic 40.0%
CGAACAAACAAACGCCATTT+GGG - chr5.4:17671743-17671762 MS.gene92940:CDS 40.0%
GCTACGCATTATCAGAAAAC+TGG - chr5.4:17670500-17670519 MS.gene92940:CDS 40.0%
TACAACATGAAACTAAGGGC+TGG - chr5.4:17670377-17670396 MS.gene92940:intron 40.0%
TACTAGATGCACTCAAACCA+AGG + chr5.4:17671179-17671198 None:intergenic 40.0%
TGGTTTGAGTGCATCTAGTA+TGG - chr5.4:17671179-17671198 MS.gene92940:intron 40.0%
TTCTTGTCTTTCTTGCAGGT+TGG + chr5.4:17670140-17670159 None:intergenic 40.0%
TTTAAGAACCCTGACCATCA+AGG - chr5.4:17670819-17670838 MS.gene92940:intron 40.0%
! ATGAAACTAAGGGCTGGTAA+AGG - chr5.4:17670383-17670402 MS.gene92940:intron 40.0%
! CCTGTTTTATATTTCCAGGC+TGG - chr5.4:17671575-17671594 MS.gene92940:intron 40.0%
! GATAGTTGGAGCAAGCTTTT+TGG + chr5.4:17671313-17671332 None:intergenic 40.0%
! TGGCCCTGTTTTATATTTCC+AGG - chr5.4:17671571-17671590 MS.gene92940:intron 40.0%
!! CATAGTTTTGCCAGTGCTTA+CGG + chr5.4:17670101-17670120 None:intergenic 40.0%
AACACTCCATATGGACAGGT+TGG + chr5.4:17670724-17670743 None:intergenic 45.0%
AACCCTGACCATCAAGGTTT+AGG - chr5.4:17670825-17670844 MS.gene92940:intron 45.0%
AAGTGACCAACCTGTCCATA+TGG - chr5.4:17670715-17670734 MS.gene92940:intron 45.0%
CGTCTTCTTGTCTTTCTTGC+AGG + chr5.4:17670144-17670163 None:intergenic 45.0%
CTTGCAGACCTTCCAAAGAT+CGG + chr5.4:17671365-17671384 None:intergenic 45.0%
GAAGACATACAAGGCCAAGT+TGG - chr5.4:17671401-17671420 MS.gene92940:intron 45.0%
GCAAATGCTACACAGGTTCA+AGG - chr5.4:17671620-17671639 MS.gene92940:intron 45.0%
GCCATAGACCTAAACCTTGA+TGG + chr5.4:17670836-17670855 None:intergenic 45.0%
GCGAACAAACAAACGCCATT+TGG - chr5.4:17671742-17671761 MS.gene92940:CDS 45.0%
GGAACTAGCAAATGCTACAC+AGG - chr5.4:17671613-17671632 MS.gene92940:intron 45.0%
TACCTGCGTACATTGGAGAT+TGG + chr5.4:17670987-17671006 None:intergenic 45.0%
TCAAGGTTTAGGTCTATGGC+TGG - chr5.4:17670836-17670855 MS.gene92940:intron 45.0%
TCGACAGAAATGCCGATAGT+TGG + chr5.4:17671327-17671346 None:intergenic 45.0%
TCTTGGGAAGACTACCAACT+TGG + chr5.4:17671418-17671437 None:intergenic 45.0%
TGGGTCTGTCCATGAACAAT+AGG + chr5.4:17670353-17670372 None:intergenic 45.0%
TTCTTCAGCTCGTCAGAAGA+AGG - chr5.4:17670286-17670305 MS.gene92940:intron 45.0%
! ACTTGACAACGGGTTTGTAC+AGG + chr5.4:17670699-17670718 None:intergenic 45.0%
! AGACCTAAACCTTGATGGTC+AGG + chr5.4:17670831-17670850 None:intergenic 45.0%
! ATTTGCTAGTTCCTCAGGAG+TGG + chr5.4:17671606-17671625 None:intergenic 45.0%
! CTTCCAAAGATCGGTTCTTG+CGG + chr5.4:17671356-17671375 None:intergenic 45.0%
! GACCTAAACCTTGATGGTCA+GGG + chr5.4:17670830-17670849 None:intergenic 45.0%
! GTAGCATTTGCTAGTTCCTC+AGG + chr5.4:17671611-17671630 None:intergenic 45.0%
!! ACAGGTTGGTCACTTGACAA+CGG + chr5.4:17670710-17670729 None:intergenic 45.0%
!! GCTTACGGAAGTGTTCGTTA+GGG + chr5.4:17670086-17670105 None:intergenic 45.0%
!! TGCTTACGGAAGTGTTCGTT+AGG + chr5.4:17670087-17670106 None:intergenic 45.0%
ACGAACACTTCCGTAAGCAC+TGG - chr5.4:17670088-17670107 MS.gene92940:CDS 50.0%
ATTTGGGTGCCAGACTGAAG+AGG - chr5.4:17671759-17671778 MS.gene92940:CDS 50.0%
CACCAATCTCCAATGTACGC+AGG - chr5.4:17670982-17671001 MS.gene92940:intron 50.0%
CCATGAACAATAGGCCTGAG+AGG + chr5.4:17670344-17670363 None:intergenic 50.0%
CCTCTCAGGCCTATTGTTCA+TGG - chr5.4:17670341-17670360 MS.gene92940:intron 50.0%
CGCAAGAACCGATCTTTGGA+AGG - chr5.4:17671354-17671373 MS.gene92940:intron 50.0%
CTTCTCCCTTGAGGAGTTGA+AGG - chr5.4:17670406-17670425 MS.gene92940:intron 50.0%
CTTGTCTTCCTTCTCTGCCT+CGG + chr5.4:17671789-17671808 None:intergenic 50.0%
GATGGCTTCTCCCTCACAAT+TGG + chr5.4:17671656-17671675 None:intergenic 50.0%
GCAGAGGCTGAAGACATACA+AGG - chr5.4:17671392-17671411 MS.gene92940:intron 50.0%
TCTTCAGTCTGGCACCCAAA+TGG + chr5.4:17671760-17671779 None:intergenic 50.0%
TGGTAAAGGCTTCTCCCTTG+AGG - chr5.4:17670397-17670416 MS.gene92940:intron 50.0%
TTCAGCTCGTCAGAAGAAGG+CGG - chr5.4:17670289-17670308 MS.gene92940:intron 50.0%
TTTGGGTGCCAGACTGAAGA+GGG - chr5.4:17671760-17671779 MS.gene92940:CDS 50.0%
! AGGCGGTGAAGATTTTCCCA+AGG - chr5.4:17670306-17670325 MS.gene92940:intron 50.0%
! ATTTTCCCAAGGCCTACAGC+TGG - chr5.4:17670317-17670336 MS.gene92940:intron 50.0%
!! AAGGAGGTACCTGCGTACAT+TGG + chr5.4:17670994-17671013 None:intergenic 50.0%
!! CAGGTTGGTCACTTGACAAC+GGG + chr5.4:17670709-17670728 None:intergenic 50.0%
AAGACGTGCACGCAAGGTCA+AGG - chr5.4:17671434-17671453 MS.gene92940:intron 55.0%
TCGCCGCAAGAACCGATCTT+TGG - chr5.4:17671350-17671369 MS.gene92940:intron 55.0%
TGACCTTGCGTGCACGTCTT+GGG + chr5.4:17671434-17671453 None:intergenic 55.0%
TGTCTTCAGCCTCTGCACGT+TGG + chr5.4:17671388-17671407 None:intergenic 55.0%
TTGACCTTGCGTGCACGTCT+TGG + chr5.4:17671435-17671454 None:intergenic 55.0%
AGAGGTCCAGCTGTAGGCCT+TGG + chr5.4:17670326-17670345 None:intergenic 60.0%
CAGGAGTGGAATCACCAGCC+TGG + chr5.4:17671592-17671611 None:intergenic 60.0%
CTTCCCAAGACGTGCACGCA+AGG - chr5.4:17671428-17671447 MS.gene92940:intron 60.0%
GAGGTCCAGCTGTAGGCCTT+GGG + chr5.4:17670325-17670344 None:intergenic 60.0%
GGCTGGTGATTCCACTCCTG+AGG - chr5.4:17671592-17671611 MS.gene92940:intron 60.0%
GTCTGCAAGCCAACGTGCAG+AGG - chr5.4:17671376-17671395 MS.gene92940:intron 60.0%
CAGACTGAAGAGGGCTGCCG+AGG - chr5.4:17671769-17671788 MS.gene92940:CDS 65.0%
CTCGGCAGCCCTCTTCAGTC+TGG + chr5.4:17671771-17671790 None:intergenic 65.0%
GGCCTACAGCTGGACCTCTC+AGG - chr5.4:17670327-17670346 MS.gene92940:intron 65.0%
GGCCTGAGAGGTCCAGCTGT+AGG + chr5.4:17670332-17670351 None:intergenic 65.0%
GAGGGCTGCCGAGGCAGAGA+AGG - chr5.4:17671778-17671797 MS.gene92940:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 17670060 17671814 17670060 ID=MS.gene92940
chr5.4 mRNA 17670060 17671814 17670060 ID=MS.gene92940.t1;Parent=MS.gene92940
chr5.4 exon 17671706 17671814 17671706 ID=MS.gene92940.t1.exon1;Parent=MS.gene92940.t1
chr5.4 CDS 17671706 17671814 17671706 ID=cds.MS.gene92940.t1;Parent=MS.gene92940.t1
chr5.4 exon 17671447 17671580 17671447 ID=MS.gene92940.t1.exon2;Parent=MS.gene92940.t1
chr5.4 CDS 17671447 17671580 17671447 ID=cds.MS.gene92940.t1;Parent=MS.gene92940.t1
chr5.4 exon 17670419 17670577 17670419 ID=MS.gene92940.t1.exon3;Parent=MS.gene92940.t1
chr5.4 CDS 17670419 17670577 17670419 ID=cds.MS.gene92940.t1;Parent=MS.gene92940.t1
chr5.4 exon 17670060 17670281 17670060 ID=MS.gene92940.t1.exon4;Parent=MS.gene92940.t1
chr5.4 CDS 17670060 17670281 17670060 ID=cds.MS.gene92940.t1;Parent=MS.gene92940.t1
Gene Sequence

>MS.gene92940

ATGGTGAAGCATAACAATGTTATCCCTAACGAACACTTCCGTAAGCACTGGCAAAACTATGTTAAGACATGGTTTAACCAACCTGCAAGAAAGACAAGAAGACGCTTAGGTAATAATTATCTCTATAATAGTATTCATATTGATTTTTGATTGATTCAGTTGTATGTATTGAAAATTGTGAGTAAAAATGTTAATTTTGATTTATTTGATATAATGGGTTGTTGCATTCTTCAGCTCGTCAGAAGAAGGCGGTGAAGATTTTCCCAAGGCCTACAGCTGGACCTCTCAGGCCTATTGTTCATGGACAGACCCAGAAATACAACATGAAACTAAGGGCTGGTAAAGGCTTCTCCCTTGAGGAGTTGAAGGTAAAATATTTGTGACTTTAACCTATGTGATTTTGATTTTCCGATGTAGTTTAGTGAATTGCTACGTGAATTGCTACGCATTATCAGAAAACTGGTTTTGATGCTCTTTTGGAGATTTAAAGAAAAAATAGAAGTGTTTGTTTACAAAATTGCAAGTCACTAAAATCGGTTATTGAAAATTATTTTCAAGAGAAGCTACTCAAAACAGCTTCTCTTAATTCCTGTACATCAATACATGGATTTGCGATTGCAAAATTTTCTCTTAATTCCTGTACAAACCCGTTGTCAAGTGACCAACCTGTCCATATGGAGTGTTTTTATCTATAGGATAAGCTAGCCAATTTAATTGAGTTTTTTTTTAAGGTCTATGTCTGGCATTAATCGTATGGCGTTTAAGAACCCTGACCATCAAGGTTTAGGTCTATGGCTGGTTTTAAGAGCTTTTTATTCTTATCTAGCATGACCATCAAAAATCAACTTTAGTTTAATTCTTATCTAGCATGACCATCAAAATCAACTTTAGTTGTTACAGTACAATTATACTTATGATATTACACCAATCTCCAATGTACGCAGGTACCTCCTTGTATGATCCATGATTTCTTTGCTTATACACTCCACTGAAAAGTGAAAACACTATCATATCATAGACAGTTTGAGACTGAGTTCTCCGAATATTCTCAGTTGTGATCTATTCCATATTCAATTCTGTCTAATTTTAGCTTCAAGATGATAAAAGAGTAAAAGACCTTGGTTTGAGTGCATCTAGTATGGAATACAACTATGTTTTGTACTGTGATGTTCTGCTATTTTACTTTACCTTTTTCGATGGTTTATTTCTTATTTCTTCTATTTTATTTACAATGTAGGCTGCAGGTATTCCCAAAAAGCTTGCTCCAACTATCGGCATTTCTGTCGATCATCGCCGCAAGAACCGATCTTTGGAAGGTCTGCAAGCCAACGTGCAGAGGCTGAAGACATACAAGGCCAAGTTGGTAGTCTTCCCAAGACGTGCACGCAAGGTCAAGGTAAATACAAATTGTAGTTATATGCTTTTAATATATGGCCTTTTTCTTAATTTTGCTACCATCGTTGCTGATAAATTTGTAAAGGAAAAAGTTGTGCATTATTCTTAATTTCTTATGGCCCTGTTTTATATTTCCAGGCTGGTGATTCCACTCCTGAGGAACTAGCAAATGCTACACAGGTTCAAGGTTCATACTTACCAATTGTGAGGGAGAAGCCATCTGTAGAGCTTGTTAAGATTACAGATGAAATGAAGGCATTTAAGGCTTATTACAAGCTTCGTCTTGAGCGAACAAACAAACGCCATTTGGGTGCCAGACTGAAGAGGGCTGCCGAGGCAGAGAAGGAAGACAAGAAGTGA

Protein sequence

>MS.gene92940.t1

MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTQKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKVKAGDSTPEELANATQVQGSYLPIVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHLGARLKRAAEAEKEDKK