Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93996.t1 | GAU18717.1 | 87.3 | 79 | 10 | 0 | 1 | 79 | 177 | 255 | 5.80E-28 | 133.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93996.t1 | A0A2Z6MKM3 | 87.3 | 79 | 10 | 0 | 1 | 79 | 177 | 255 | 4.1e-28 | 133.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene93996 | 0.80932 | 2.01E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene93996 | 0.810705 | 1.01E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene93996 | 0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene93996 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene051613 | MS.gene93996 | 0.801312 | 9.55E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene93996 | 0.806969 | 6.36E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene93996 | 0.811633 | 6.35E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene93996 | 0.821502 | 3.90E-53 | -1.69E-46 |
| MS.gene053202 | MS.gene93996 | 0.818017 | 2.44E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene93996 | 0.828827 | 7.24E-55 | -1.69E-46 |
| MS.gene054405 | MS.gene93996 | 0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene93996 | 0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene93996 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene055725 | MS.gene93996 | 0.808372 | 3.20E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene93996 | 0.801926 | 7.15E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene93996 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene93996 | 0.809897 | 1.51E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene93996 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene05925 | MS.gene93996 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene93996 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene93996 | 0.816079 | 6.65E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene93996 | 0.805851 | 1.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93996.t1 | MTR_8g088840 | 93.590 | 78 | 5 | 0 | 1 | 78 | 179 | 256 | 6.15e-44 | 147 |
| MS.gene93996.t1 | MTR_8g088840 | 93.590 | 78 | 5 | 0 | 1 | 78 | 179 | 256 | 6.82e-44 | 147 |
| MS.gene93996.t1 | MTR_8g088800 | 78.205 | 78 | 17 | 0 | 1 | 78 | 152 | 229 | 1.24e-35 | 125 |
| MS.gene93996.t1 | MTR_4g049650 | 76.923 | 78 | 18 | 0 | 1 | 78 | 177 | 254 | 3.79e-34 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93996.t1 | AT1G61000 | 51.282 | 78 | 38 | 0 | 1 | 78 | 174 | 251 | 1.20e-21 | 87.4 |
Find 16 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACATCTGTTTATTGTTC+AGG | 0.250147 | 3.1:+26127415 | None:intergenic |
| AATGATACCTGTACTTTATC+AGG | 0.298393 | 3.1:+26126959 | None:intergenic |
| AAGGGAAATGCCTTCTGTTC+AGG | 0.323153 | 3.1:-26127481 | None:intergenic |
| GACTGTGGAAATGGATGATA+AGG | 0.411995 | 3.1:-26127361 | MS.gene93996:intron |
| TTCTGGTGCTGAATATAAAC+TGG | 0.412690 | 3.1:-26127032 | MS.gene93996:CDS |
| GAAGGAGAGGACTGTGGAAA+TGG | 0.440042 | 3.1:-26127370 | MS.gene93996:CDS |
| AAGTACTATAAAGAAATTGA+AGG | 0.472617 | 3.1:-26127388 | MS.gene93996:CDS |
| AATGCCTTCTGTTCAGGAGG+TGG | 0.532743 | 3.1:-26127475 | MS.gene93996:CDS |
| GTACAAAATGTTCAAGAGCA+TGG | 0.533679 | 3.1:-26127010 | MS.gene93996:CDS |
| GCATCCACCTCCTGAACAGA+AGG | 0.551705 | 3.1:+26127471 | None:intergenic |
| ACTATCAAATACTATTCCAT+CGG | 0.594477 | 3.1:+26124679 | None:intergenic |
| CTATAAAGAAATTGAAGGAG+AGG | 0.594531 | 3.1:-26127383 | MS.gene93996:CDS |
| GAAATTGAAGGAGAGGACTG+TGG | 0.597307 | 3.1:-26127376 | MS.gene93996:CDS |
| TCAATCGCCTGATAAAGTAC+AGG | 0.611191 | 3.1:-26126966 | MS.gene93996:intron |
| GGAAATGCCTTCTGTTCAGG+AGG | 0.641002 | 3.1:-26127478 | None:intergenic |
| TATACAGCTAGATTCGCCGA+TGG | 0.689447 | 3.1:-26124695 | MS.gene93996:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATTATGTAATATGA+AGG | + | chr3.1:26125567-26125586 | None:intergenic | 10.0% |
| !! | TTTATTGTATTAAAAAATTG+TGG | - | chr3.1:26125581-26125600 | MS.gene93996:intron | 10.0% |
| !! | ATAATTAAGATGAAACTAAT+TGG | + | chr3.1:26126936-26126955 | None:intergenic | 15.0% |
| !! | ATATATATTAATTCATGTGT+TGG | - | chr3.1:26125036-26125055 | MS.gene93996:intron | 15.0% |
| !! | ATGTTTATGTGAATAATTAA+TGG | - | chr3.1:26124934-26124953 | MS.gene93996:intron | 15.0% |
| !!! | ATATTGTAAATGTGTTTTAT+TGG | - | chr3.1:26125334-26125353 | MS.gene93996:intron | 15.0% |
| !!! | CGATACTATTTATTTTTTTA+TGG | - | chr3.1:26127319-26127338 | MS.gene93996:intron | 15.0% |
| !!! | GTATAATACAAAAATTTTAG+AGG | - | chr3.1:26126250-26126269 | MS.gene93996:intron | 15.0% |
| !!! | TCGTTTTCTTTTAATTATTT+AGG | - | chr3.1:26127226-26127245 | MS.gene93996:intron | 15.0% |
| !! | AAATAAGCAGGATTATAATT+TGG | + | chr3.1:26126503-26126522 | None:intergenic | 20.0% |
| !! | AAGTACTATAAAGAAATTGA+AGG | - | chr3.1:26124776-26124795 | MS.gene93996:intron | 20.0% |
| !! | AATAAGCAGGATTATAATTT+GGG | + | chr3.1:26126502-26126521 | None:intergenic | 20.0% |
| !! | TAAAAAGATTATCAACAGTT+AGG | - | chr3.1:26126216-26126235 | MS.gene93996:intron | 20.0% |
| !! | TAGTTAAGTAGTTATTTAAG+AGG | - | chr3.1:26125723-26125742 | MS.gene93996:intron | 20.0% |
| !! | TTTATGTGAATAATTAATGG+TGG | - | chr3.1:26124937-26124956 | MS.gene93996:intron | 20.0% |
| !!! | CATTGAGTTCATTTTATTTA+TGG | - | chr3.1:26126456-26126475 | MS.gene93996:intron | 20.0% |
| !!! | TAATTATTATGATGTTTTCC+TGG | - | chr3.1:26126949-26126968 | MS.gene93996:intron | 20.0% |
| !!! | TATTTAAGAGGTTAGTTAAT+TGG | - | chr3.1:26125735-26125754 | MS.gene93996:intron | 20.0% |
| !!! | TTAGTAGATTTTTCATGAAA+AGG | - | chr3.1:26125769-26125788 | MS.gene93996:intron | 20.0% |
| !!! | TTTTATTTCTTGCTACATTT+TGG | - | chr3.1:26127112-26127131 | MS.gene93996:intron | 20.0% |
| ! | AATCTTTACTTCTTGATGTT+GGG | - | chr3.1:26124869-26124888 | MS.gene93996:intron | 25.0% |
| ! | ATCAAAATGAGAAAATAAGC+AGG | + | chr3.1:26126515-26126534 | None:intergenic | 25.0% |
| ! | ATGAAGGACATAAATTATGT+TGG | + | chr3.1:26125551-26125570 | None:intergenic | 25.0% |
| ! | ATGAGAAAAAGGAATTTGAA+TGG | + | chr3.1:26126766-26126785 | None:intergenic | 25.0% |
| ! | ATTCAAACATGCGTTAAAAT+TGG | - | chr3.1:26126042-26126061 | MS.gene93996:intron | 25.0% |
| ! | GACAACAACGAAATTATATT+TGG | + | chr3.1:26127300-26127319 | None:intergenic | 25.0% |
| ! | TAATCTTTACTTCTTGATGT+TGG | - | chr3.1:26124868-26124887 | MS.gene93996:intron | 25.0% |
| ! | TTACTCTATGAATAAGTTTC+CGG | + | chr3.1:26126180-26126199 | None:intergenic | 25.0% |
| !! | AAGTTAAAATGTCATTTGAG+TGG | - | chr3.1:26126702-26126721 | MS.gene93996:intron | 25.0% |
| !! | AGGTTAGTTAATTGGTTAAT+GGG | - | chr3.1:26125743-26125762 | MS.gene93996:intron | 25.0% |
| !! | AGTTAAAATGTCATTTGAGT+GGG | - | chr3.1:26126703-26126722 | MS.gene93996:intron | 25.0% |
| !! | ATGAGCTATTCTTTTATGTT+GGG | + | chr3.1:26125648-26125667 | None:intergenic | 25.0% |
| !! | TATGAGCTATTCTTTTATGT+TGG | + | chr3.1:26125649-26125668 | None:intergenic | 25.0% |
| !!! | ATAGTTCTAAATTGCGATTA+CGG | + | chr3.1:26126358-26126377 | None:intergenic | 25.0% |
| !!! | CATTTTGATACTTGATATCA+TGG | - | chr3.1:26126526-26126545 | MS.gene93996:intron | 25.0% |
| !!! | TGAATAATTAATGGTGGATT+AGG | - | chr3.1:26124943-26124962 | MS.gene93996:intron | 25.0% |
| !!! | TTTTTTATGGTGTTTCCTTT+AGG | - | chr3.1:26127332-26127351 | MS.gene93996:intron | 25.0% |
| AAACTAATTGGAACCAATGA+AGG | + | chr3.1:26126924-26126943 | None:intergenic | 30.0% | |
| AACAAATTCAGATGTGTCAA+AGG | - | chr3.1:26125796-26125815 | MS.gene93996:intron | 30.0% | |
| AAGTCTTGATTCATGAAAAG+AGG | + | chr3.1:26126994-26127013 | None:intergenic | 30.0% | |
| AATATGCAGATTGATGTATG+AGG | - | chr3.1:26126398-26126417 | MS.gene93996:intron | 30.0% | |
| AATATTGTTAGACGAAGGTT+AGG | + | chr3.1:26126627-26126646 | None:intergenic | 30.0% | |
| AATCATAATCCAGACATCAT+TGG | - | chr3.1:26126896-26126915 | MS.gene93996:intron | 30.0% | |
| AATGATACCTGTACTTTATC+AGG | + | chr3.1:26125208-26125227 | None:intergenic | 30.0% | |
| ATCGAGTTTAGTAAAATCAC+TGG | + | chr3.1:26126018-26126037 | None:intergenic | 30.0% | |
| ATCTTTACTTCTTGATGTTG+GGG | - | chr3.1:26124870-26124889 | MS.gene93996:intron | 30.0% | |
| ATGACATCTGTTTATTGTTC+AGG | + | chr3.1:26124752-26124771 | None:intergenic | 30.0% | |
| ATTAGAGGTTCATAATCATG+TGG | - | chr3.1:26126644-26126663 | MS.gene93996:intron | 30.0% | |
| CAACGAAATTATATTTGGAC+TGG | + | chr3.1:26127295-26127314 | None:intergenic | 30.0% | |
| CACATTTACAATATTCACAC+AGG | + | chr3.1:26125328-26125347 | None:intergenic | 30.0% | |
| CTATAAAGAAATTGAAGGAG+AGG | - | chr3.1:26124781-26124800 | MS.gene93996:intron | 30.0% | |
| TAGATCACACTTTAATCTCT+CGG | + | chr3.1:26126740-26126759 | None:intergenic | 30.0% | |
| TCGAGTTTAGTAAAATCACT+GGG | + | chr3.1:26126017-26126036 | None:intergenic | 30.0% | |
| ! | GAGGTTAGTTAATTGGTTAA+TGG | - | chr3.1:26125742-26125761 | MS.gene93996:intron | 30.0% |
| ! | GTAATCGCAATTTAGAACTA+TGG | - | chr3.1:26126357-26126376 | MS.gene93996:intron | 30.0% |
| ! | GTTAAAATGTCATTTGAGTG+GGG | - | chr3.1:26126704-26126723 | MS.gene93996:intron | 30.0% |
| ! | TACAGGTATCATTTTCATGT+TGG | - | chr3.1:26125215-26125234 | MS.gene93996:intron | 30.0% |
| ! | TCTTTTCATGAATCAAGACT+TGG | - | chr3.1:26126993-26127012 | MS.gene93996:CDS | 30.0% |
| ! | TTAATTCATGTGTTGGTACT+TGG | - | chr3.1:26125043-26125062 | MS.gene93996:intron | 30.0% |
| !! | AATTGTGATTTTAGCCGTAT+TGG | - | chr3.1:26126291-26126310 | MS.gene93996:intron | 30.0% |
| !! | ATGTGTTATTTACACATGAG+AGG | + | chr3.1:26126831-26126850 | None:intergenic | 30.0% |
| !! | TGTGTTATTTACACATGAGA+GGG | + | chr3.1:26126830-26126849 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTGTTGTAGTGTT+AGG | - | chr3.1:26127130-26127149 | MS.gene93996:intron | 30.0% |
| ACAATATTCACACAGGAAGA+TGG | + | chr3.1:26125321-26125340 | None:intergenic | 35.0% | |
| ACACCAAAGTCACAACATAA+TGG | - | chr3.1:26125677-26125696 | MS.gene93996:intron | 35.0% | |
| ACATCAATAAGCTCTCCTAA+AGG | + | chr3.1:26127350-26127369 | None:intergenic | 35.0% | |
| ACGGCAAAATACATCCAATA+CGG | + | chr3.1:26126308-26126327 | None:intergenic | 35.0% | |
| CAATATTCACACAGGAAGAT+GGG | + | chr3.1:26125320-26125339 | None:intergenic | 35.0% | |
| CATTGCGGACAATTATATCA+CGG | + | chr3.1:26126327-26126346 | None:intergenic | 35.0% | |
| CCAAAATGCACGACTAAATT+GGG | + | chr3.1:26126867-26126886 | None:intergenic | 35.0% | |
| CCTCTAATATTGTTAGACGA+AGG | + | chr3.1:26126632-26126651 | None:intergenic | 35.0% | |
| CCTTCGTCTAACAATATTAG+AGG | - | chr3.1:26126629-26126648 | MS.gene93996:intron | 35.0% | |
| GTACAAAATGTTCAAGAGCA+TGG | - | chr3.1:26125154-26125173 | MS.gene93996:intron | 35.0% | |
| GTATAGTGTAACTTCTGCTT+TGG | - | chr3.1:26127081-26127100 | MS.gene93996:intron | 35.0% | |
| TTAGGAGTAGATCTCTAATG+TGG | - | chr3.1:26127160-26127179 | MS.gene93996:intron | 35.0% | |
| TTCCAGTCAAATCAATCGTT+GGG | + | chr3.1:26127202-26127221 | None:intergenic | 35.0% | |
| ! | CAGAAATCTGAGGTAACAAA+AGG | + | chr3.1:26125117-26125136 | None:intergenic | 35.0% |
| ! | CATATTTTGTTCATGAGACC+AGG | + | chr3.1:26126970-26126989 | None:intergenic | 35.0% |
| ! | CTTTTGTTACCTCAGATTTC+TGG | - | chr3.1:26125115-26125134 | MS.gene93996:intron | 35.0% |
| ! | TAATTAGAGTACCTTTGTGC+AGG | - | chr3.1:26126080-26126099 | MS.gene93996:intron | 35.0% |
| ! | TTCTGGTGCTGAATATAAAC+TGG | - | chr3.1:26125132-26125151 | MS.gene93996:intron | 35.0% |
| !! | ACTCTGATTTTGGCACAATT+TGG | - | chr3.1:26125969-26125988 | MS.gene93996:intron | 35.0% |
| !!! | ATCATCCTGTTTCTGCATTT+TGG | - | chr3.1:26126551-26126570 | MS.gene93996:intron | 35.0% |
| !!! | TGGGGTTTTTGAGTAGTATA+TGG | - | chr3.1:26124888-26124907 | MS.gene93996:intron | 35.0% |
| ACAGGACAAACTTTGCTCTT+AGG | + | chr3.1:26126154-26126173 | None:intergenic | 40.0% | |
| AGAGGAGAGCAACTCTAATT+TGG | - | chr3.1:26126111-26126130 | MS.gene93996:intron | 40.0% | |
| AGGACAAACTTTGCTCTTAG+GGG | + | chr3.1:26126152-26126171 | None:intergenic | 40.0% | |
| AGTACCTTTGTGCAGGATTA+TGG | - | chr3.1:26126087-26126106 | MS.gene93996:intron | 40.0% | |
| ATCACACTTTAATCTCTCGG+AGG | + | chr3.1:26126737-26126756 | None:intergenic | 40.0% | |
| ATGAAGGAACCAATGATGTC+TGG | + | chr3.1:26126908-26126927 | None:intergenic | 40.0% | |
| CAACATAATGGCTGCTTGAT+AGG | - | chr3.1:26125689-26125708 | MS.gene93996:intron | 40.0% | |
| CAGCCATTATGTTGTGACTT+TGG | + | chr3.1:26125683-26125702 | None:intergenic | 40.0% | |
| CAGGACAAACTTTGCTCTTA+GGG | + | chr3.1:26126153-26126172 | None:intergenic | 40.0% | |
| GACTGTGGAAATGGATGATA+AGG | - | chr3.1:26124803-26124822 | MS.gene93996:intron | 40.0% | |
| GATCTCTAATGTGGAGCAAT+AGG | - | chr3.1:26127169-26127188 | MS.gene93996:intron | 40.0% | |
| GCCAAAATGCACGACTAAAT+TGG | + | chr3.1:26126868-26126887 | None:intergenic | 40.0% | |
| GTAGTGTTAGGCTAACTCTT+AGG | - | chr3.1:26127142-26127161 | MS.gene93996:intron | 40.0% | |
| GTTAATGTTAGCATGTGCAC+CGG | + | chr3.1:26125431-26125450 | None:intergenic | 40.0% | |
| GTTCCAGTCAAATCAATCGT+TGG | + | chr3.1:26127203-26127222 | None:intergenic | 40.0% | |
| TAATTGTCCGCAATGTCACT+AGG | - | chr3.1:26126332-26126351 | MS.gene93996:intron | 40.0% | |
| TATTCAGCACCAGAAATCTG+AGG | + | chr3.1:26125127-26125146 | None:intergenic | 40.0% | |
| TCAATCGCCTGATAAAGTAC+AGG | - | chr3.1:26125198-26125217 | MS.gene93996:intron | 40.0% | |
| TCTTCCATAATCCTGCACAA+AGG | + | chr3.1:26126094-26126113 | None:intergenic | 40.0% | |
| TGAATAAGTTTCCGGCATAC+AGG | + | chr3.1:26126172-26126191 | None:intergenic | 40.0% | |
| TGCACGTTACATAACTGACA+GGG | + | chr3.1:26124977-26124996 | None:intergenic | 40.0% | |
| TGCTTCTCTCTCTTGATGAA+TGG | - | chr3.1:26126787-26126806 | MS.gene93996:intron | 40.0% | |
| TGGTAACCACATAGAGGTAA+GGG | + | chr3.1:26125364-26125383 | None:intergenic | 40.0% | |
| TTTGTGCAGGATTATGGAAG+AGG | - | chr3.1:26126093-26126112 | MS.gene93996:intron | 40.0% | |
| ! | CCCAATTTAGTCGTGCATTT+TGG | - | chr3.1:26126864-26126883 | MS.gene93996:intron | 40.0% |
| ! | GAGAGAAGCACATGAGAAAA+AGG | + | chr3.1:26126777-26126796 | None:intergenic | 40.0% |
| ! | TATGTTACAGCAAGCTTGCT+AGG | + | chr3.1:26125469-26125488 | None:intergenic | 40.0% |
| !! | GACATCATTGGTTCCTTCAT+TGG | - | chr3.1:26126908-26126927 | MS.gene93996:intron | 40.0% |
| !! | TAGAGGTCTCTAAAACTGCA+CGG | - | chr3.1:26126267-26126286 | MS.gene93996:intron | 40.0% |
| ACAAACTTTGCTCTTAGGGG+TGG | + | chr3.1:26126149-26126168 | None:intergenic | 45.0% | |
| ACACATGAGAGGGTAAAGTG+TGG | + | chr3.1:26126820-26126839 | None:intergenic | 45.0% | |
| ATTACGGCCTAGTGACATTG+CGG | + | chr3.1:26126342-26126361 | None:intergenic | 45.0% | |
| ATTCACACAGGAAGATGGGT+TGG | + | chr3.1:26125316-26125335 | None:intergenic | 45.0% | |
| GAAATTGAAGGAGAGGACTG+TGG | - | chr3.1:26124788-26124807 | MS.gene93996:intron | 45.0% | |
| GCAAAGTTTGTCCTGTATGC+CGG | - | chr3.1:26126158-26126177 | MS.gene93996:intron | 45.0% | |
| GTGCACGTTACATAACTGAC+AGG | + | chr3.1:26124978-26124997 | None:intergenic | 45.0% | |
| GTGGTAACCACATAGAGGTA+AGG | + | chr3.1:26125365-26125384 | None:intergenic | 45.0% | |
| TATACAGCTAGATTCGCCGA+TGG | - | chr3.1:26127469-26127488 | MS.gene93996:CDS | 45.0% | |
| TGCAGCCAAAATGCAGAAAC+AGG | + | chr3.1:26126559-26126578 | None:intergenic | 45.0% | |
| TTGTGCACAGTCATAGCAAG+TGG | + | chr3.1:26125891-26125910 | None:intergenic | 45.0% | |
| ! | CATACGCGAGACTCTGATTT+TGG | - | chr3.1:26125959-26125978 | MS.gene93996:intron | 45.0% |
| ! | CTTGCTATGACTGTGCACAA+AGG | - | chr3.1:26125891-26125910 | MS.gene93996:intron | 45.0% |
| !! | GACCCAACGATTGATTTGAC+TGG | - | chr3.1:26127197-26127216 | MS.gene93996:intron | 45.0% |
| !!! | CTTCTTGTTTTGCTAAGCGC+AGG | + | chr3.1:26125495-26125514 | None:intergenic | 45.0% |
| ACCTTCTCTTGGGTAGTGAC+CGG | - | chr3.1:26125409-26125428 | MS.gene93996:intron | 50.0% | |
| CAGTCATAGCAAGTGGCACA+AGG | + | chr3.1:26125884-26125903 | None:intergenic | 50.0% | |
| CCACTGTGGTAACCACATAG+AGG | + | chr3.1:26125370-26125389 | None:intergenic | 50.0% | |
| CCTCTATGTGGTTACCACAG+TGG | - | chr3.1:26125367-26125386 | MS.gene93996:intron | 50.0% | |
| GAAGGAGAGGACTGTGGAAA+TGG | - | chr3.1:26124794-26124813 | MS.gene93996:intron | 50.0% | |
| GCGACTCACAACCTTCTCTT+GGG | - | chr3.1:26125399-26125418 | MS.gene93996:intron | 50.0% | |
| ACCGGTCACTACCCAAGAGA+AGG | + | chr3.1:26125413-26125432 | None:intergenic | 55.0% | |
| CGCGACTCACAACCTTCTCT+TGG | - | chr3.1:26125398-26125417 | MS.gene93996:intron | 55.0% | |
| GCATCCACCTCCTGAACAGA+AGG | + | chr3.1:26124696-26124715 | None:intergenic | 55.0% | |
| GGACTGCCCTTACCTCTATG+TGG | - | chr3.1:26125355-26125374 | MS.gene93996:intron | 55.0% | |
| ! | GTCGCGAGAGTTTTCCACTG+TGG | + | chr3.1:26125384-26125403 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 26124690 | 26127496 | 26124690 | ID=MS.gene93996 |
| chr3.1 | mRNA | 26124690 | 26127496 | 26124690 | ID=MS.gene93996.t1;Parent=MS.gene93996 |
| chr3.1 | exon | 26127362 | 26127496 | 26127362 | ID=MS.gene93996.t1.exon1;Parent=MS.gene93996.t1 |
| chr3.1 | CDS | 26127362 | 26127496 | 26127362 | ID=cds.MS.gene93996.t1;Parent=MS.gene93996.t1 |
| chr3.1 | exon | 26126967 | 26127056 | 26126967 | ID=MS.gene93996.t1.exon2;Parent=MS.gene93996.t1 |
| chr3.1 | CDS | 26126967 | 26127056 | 26126967 | ID=cds.MS.gene93996.t1;Parent=MS.gene93996.t1 |
| chr3.1 | exon | 26124819 | 26124832 | 26124819 | ID=MS.gene93996.t1.exon3;Parent=MS.gene93996.t1 |
| chr3.1 | CDS | 26124819 | 26124832 | 26124819 | ID=cds.MS.gene93996.t1;Parent=MS.gene93996.t1 |
| chr3.1 | exon | 26124690 | 26124723 | 26124690 | ID=MS.gene93996.t1.exon4;Parent=MS.gene93996.t1 |
| chr3.1 | CDS | 26124690 | 26124723 | 26124690 | ID=cds.MS.gene93996.t1;Parent=MS.gene93996.t1 |
| Gene Sequence |
| Protein sequence |
