Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94683.t1 | XP_013449167.2 | 98.8 | 427 | 5 | 0 | 1 | 427 | 1 | 427 | 3.20E-254 | 887.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94683.t1 | Q8LED3 | 62.7 | 421 | 151 | 2 | 13 | 427 | 14 | 434 | 2.3e-160 | 566.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94683.t1 | A0A396H185 | 98.8 | 427 | 5 | 0 | 1 | 427 | 1 | 427 | 2.3e-254 | 887.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene94683 | 0.80031 | 1.53E-48 | -1.69E-46 |
| MS.gene050376 | MS.gene94683 | 0.801615 | 8.28E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene94683 | 0.81009 | 1.37E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene94683 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene94683 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene94683 | 0.824165 | 9.36E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene94683 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene053164 | MS.gene94683 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene94683 | 0.818009 | 2.45E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene94683 | 0.801417 | 9.09E-49 | -1.69E-46 |
| MS.gene054805 | MS.gene94683 | 0.819537 | 1.10E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene94683 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene94683 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene94683 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene94683 | 0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene94683 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene058339 | MS.gene94683 | 0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene060652 | MS.gene94683 | 0.813314 | 2.72E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94683.t1 | MTR_7g068920 | 98.812 | 421 | 5 | 0 | 7 | 427 | 1 | 421 | 0.0 | 864 |
| MS.gene94683.t1 | MTR_4g016940 | 77.986 | 427 | 94 | 0 | 1 | 427 | 1 | 427 | 0.0 | 701 |
| MS.gene94683.t1 | MTR_8g463790 | 45.278 | 413 | 206 | 5 | 16 | 427 | 16 | 409 | 3.82e-129 | 379 |
| MS.gene94683.t1 | MTR_5g083260 | 42.019 | 426 | 235 | 6 | 3 | 427 | 10 | 424 | 1.91e-128 | 377 |
| MS.gene94683.t1 | MTR_3g070900 | 47.688 | 346 | 179 | 2 | 84 | 427 | 104 | 449 | 2.50e-125 | 370 |
| MS.gene94683.t1 | MTR_3g071650 | 40.000 | 425 | 254 | 1 | 3 | 427 | 7 | 430 | 2.57e-119 | 355 |
| MS.gene94683.t1 | MTR_5g082880 | 46.418 | 349 | 182 | 3 | 84 | 427 | 163 | 511 | 5.89e-119 | 356 |
| MS.gene94683.t1 | MTR_4g014430 | 46.532 | 346 | 180 | 4 | 83 | 427 | 105 | 446 | 5.29e-111 | 334 |
| MS.gene94683.t1 | MTR_4g014440 | 45.845 | 349 | 181 | 5 | 85 | 427 | 61 | 407 | 1.29e-110 | 332 |
| MS.gene94683.t1 | MTR_7g070060 | 43.343 | 353 | 192 | 5 | 81 | 427 | 59 | 409 | 1.02e-107 | 324 |
| MS.gene94683.t1 | MTR_1g112210 | 40.634 | 347 | 182 | 8 | 84 | 427 | 57 | 382 | 2.35e-89 | 276 |
| MS.gene94683.t1 | MTR_1g112210 | 40.634 | 347 | 169 | 9 | 84 | 427 | 57 | 369 | 4.79e-88 | 272 |
| MS.gene94683.t1 | MTR_1g050448 | 39.655 | 348 | 185 | 8 | 83 | 427 | 50 | 375 | 6.26e-86 | 267 |
| MS.gene94683.t1 | MTR_7g070060 | 44.068 | 295 | 157 | 5 | 139 | 427 | 15 | 307 | 9.17e-86 | 264 |
| MS.gene94683.t1 | MTR_3g464570 | 38.150 | 346 | 198 | 6 | 86 | 427 | 43 | 376 | 3.84e-85 | 265 |
| MS.gene94683.t1 | MTR_5g071350 | 37.883 | 359 | 197 | 10 | 82 | 427 | 54 | 399 | 8.52e-82 | 257 |
| MS.gene94683.t1 | MTR_3g049330 | 36.599 | 347 | 198 | 6 | 81 | 427 | 26 | 350 | 2.28e-81 | 254 |
| MS.gene94683.t1 | MTR_5g033800 | 36.842 | 380 | 207 | 12 | 64 | 427 | 121 | 483 | 2.60e-77 | 248 |
| MS.gene94683.t1 | MTR_7g109550 | 36.676 | 349 | 196 | 9 | 86 | 427 | 137 | 467 | 5.06e-76 | 244 |
| MS.gene94683.t1 | MTR_4g079700 | 36.550 | 342 | 192 | 7 | 86 | 427 | 47 | 363 | 4.75e-75 | 239 |
| MS.gene94683.t1 | MTR_7g093450 | 36.752 | 351 | 204 | 8 | 85 | 427 | 247 | 587 | 1.71e-74 | 244 |
| MS.gene94683.t1 | MTR_0136s0010 | 37.322 | 351 | 202 | 9 | 85 | 427 | 169 | 509 | 4.04e-74 | 241 |
| MS.gene94683.t1 | MTR_4g126950 | 35.613 | 351 | 208 | 7 | 84 | 427 | 107 | 446 | 5.03e-74 | 239 |
| MS.gene94683.t1 | MTR_5g034810 | 38.304 | 342 | 187 | 9 | 86 | 427 | 35 | 352 | 3.99e-73 | 233 |
| MS.gene94683.t1 | MTR_2g073510 | 36.127 | 346 | 198 | 7 | 83 | 427 | 30 | 353 | 4.86e-73 | 233 |
| MS.gene94683.t1 | MTR_2g091175 | 35.652 | 345 | 197 | 8 | 83 | 427 | 47 | 366 | 7.04e-73 | 233 |
| MS.gene94683.t1 | MTR_4g088030 | 35.362 | 345 | 199 | 7 | 83 | 427 | 30 | 350 | 1.99e-72 | 231 |
| MS.gene94683.t1 | MTR_4g121560 | 33.242 | 364 | 224 | 6 | 71 | 427 | 102 | 453 | 1.11e-71 | 233 |
| MS.gene94683.t1 | MTR_5g059400 | 32.187 | 407 | 241 | 11 | 32 | 427 | 133 | 515 | 2.37e-71 | 234 |
| MS.gene94683.t1 | MTR_1g116130 | 32.187 | 407 | 241 | 11 | 32 | 427 | 133 | 515 | 2.37e-71 | 234 |
| MS.gene94683.t1 | MTR_2g022560 | 37.534 | 365 | 195 | 10 | 79 | 427 | 90 | 437 | 3.76e-71 | 231 |
| MS.gene94683.t1 | MTR_4g087730 | 35.965 | 342 | 195 | 7 | 86 | 427 | 45 | 362 | 4.27e-71 | 228 |
| MS.gene94683.t1 | MTR_2g015720 | 35.072 | 345 | 199 | 8 | 83 | 427 | 39 | 358 | 8.23e-71 | 228 |
| MS.gene94683.t1 | MTR_7g070060 | 43.750 | 240 | 132 | 2 | 81 | 318 | 59 | 297 | 1.27e-70 | 225 |
| MS.gene94683.t1 | MTR_3g021060 | 35.429 | 350 | 194 | 10 | 82 | 427 | 42 | 363 | 6.24e-70 | 225 |
| MS.gene94683.t1 | MTR_1g111010 | 36.023 | 347 | 186 | 9 | 83 | 427 | 29 | 341 | 1.35e-69 | 224 |
| MS.gene94683.t1 | MTR_8g069790 | 36.158 | 354 | 203 | 9 | 84 | 427 | 176 | 516 | 1.76e-69 | 229 |
| MS.gene94683.t1 | MTR_3g021090 | 34.971 | 346 | 193 | 10 | 82 | 423 | 27 | 344 | 8.40e-69 | 224 |
| MS.gene94683.t1 | MTR_2g073500 | 35.429 | 350 | 189 | 9 | 84 | 427 | 27 | 345 | 2.06e-68 | 221 |
| MS.gene94683.t1 | MTR_3g035830 | 34.286 | 350 | 198 | 10 | 82 | 427 | 27 | 348 | 2.38e-68 | 221 |
| MS.gene94683.t1 | MTR_3g464570 | 37.722 | 281 | 160 | 5 | 151 | 427 | 3 | 272 | 1.14e-66 | 214 |
| MS.gene94683.t1 | MTR_3g090120 | 31.066 | 441 | 257 | 12 | 6 | 427 | 47 | 459 | 7.59e-66 | 218 |
| MS.gene94683.t1 | MTR_1g058380 | 32.477 | 428 | 219 | 14 | 25 | 427 | 12 | 394 | 1.32e-64 | 213 |
| MS.gene94683.t1 | MTR_7g094750 | 32.033 | 359 | 216 | 8 | 83 | 427 | 88 | 432 | 6.95e-63 | 209 |
| MS.gene94683.t1 | MTR_8g093530 | 31.909 | 351 | 210 | 6 | 84 | 427 | 88 | 416 | 1.57e-62 | 208 |
| MS.gene94683.t1 | MTR_5g033800 | 35.926 | 270 | 148 | 8 | 64 | 318 | 121 | 380 | 1.07e-48 | 170 |
| MS.gene94683.t1 | MTR_7g094750 | 31.687 | 243 | 157 | 3 | 83 | 318 | 88 | 328 | 1.84e-42 | 152 |
| MS.gene94683.t1 | MTR_5g035150 | 31.117 | 376 | 207 | 15 | 81 | 427 | 79 | 431 | 5.58e-42 | 154 |
| MS.gene94683.t1 | MTR_8g104970 | 30.685 | 365 | 215 | 14 | 84 | 427 | 118 | 465 | 6.43e-42 | 154 |
| MS.gene94683.t1 | MTR_5g035090 | 30.447 | 358 | 222 | 13 | 85 | 427 | 82 | 427 | 6.40e-40 | 148 |
| MS.gene94683.t1 | MTR_5g035080 | 28.906 | 384 | 215 | 15 | 75 | 427 | 64 | 420 | 6.43e-40 | 148 |
| MS.gene94683.t1 | MTR_8g099300 | 25.293 | 427 | 278 | 12 | 20 | 427 | 15 | 419 | 1.05e-37 | 142 |
| MS.gene94683.t1 | MTR_3g109840 | 29.891 | 368 | 207 | 14 | 86 | 427 | 73 | 415 | 1.57e-37 | 141 |
| MS.gene94683.t1 | MTR_6g016880 | 28.738 | 428 | 255 | 16 | 20 | 427 | 22 | 419 | 3.14e-37 | 140 |
| MS.gene94683.t1 | MTR_7g019120 | 28.829 | 444 | 264 | 19 | 7 | 427 | 6 | 420 | 5.72e-37 | 140 |
| MS.gene94683.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 86 | 427 | 264 | 609 | 6.34e-37 | 142 |
| MS.gene94683.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 86 | 427 | 334 | 679 | 1.03e-36 | 142 |
| MS.gene94683.t1 | MTR_5g035070 | 30.939 | 362 | 225 | 14 | 81 | 427 | 82 | 433 | 4.76e-36 | 137 |
| MS.gene94683.t1 | MTR_8g027900 | 27.198 | 364 | 230 | 12 | 83 | 427 | 208 | 555 | 9.51e-36 | 139 |
| MS.gene94683.t1 | MTR_6g016875 | 30.194 | 361 | 223 | 12 | 83 | 427 | 61 | 408 | 9.92e-35 | 134 |
| MS.gene94683.t1 | MTR_2g016060 | 29.223 | 373 | 204 | 15 | 87 | 427 | 56 | 400 | 1.36e-34 | 133 |
| MS.gene94683.t1 | MTR_6g061710 | 25.485 | 412 | 261 | 15 | 40 | 427 | 125 | 514 | 1.87e-34 | 134 |
| MS.gene94683.t1 | MTR_1g076690 | 25.753 | 365 | 231 | 14 | 86 | 427 | 223 | 570 | 5.36e-34 | 134 |
| MS.gene94683.t1 | MTR_8g093870 | 26.558 | 369 | 221 | 15 | 83 | 427 | 130 | 472 | 2.24e-32 | 128 |
| MS.gene94683.t1 | MTR_4g125060 | 27.596 | 366 | 215 | 13 | 86 | 427 | 132 | 471 | 3.45e-32 | 127 |
| MS.gene94683.t1 | MTR_4g125060 | 27.596 | 366 | 215 | 13 | 86 | 427 | 200 | 539 | 9.23e-32 | 127 |
| MS.gene94683.t1 | MTR_4g125060 | 27.793 | 367 | 213 | 14 | 86 | 427 | 171 | 510 | 1.18e-31 | 126 |
| MS.gene94683.t1 | MTR_4g092830 | 27.248 | 367 | 220 | 15 | 86 | 427 | 48 | 392 | 4.50e-31 | 124 |
| MS.gene94683.t1 | MTR_5g069320 | 28.763 | 299 | 143 | 8 | 133 | 420 | 147 | 386 | 1.62e-30 | 121 |
| MS.gene94683.t1 | MTR_6g007777 | 25.348 | 359 | 242 | 10 | 82 | 427 | 112 | 457 | 4.05e-30 | 121 |
| MS.gene94683.t1 | MTR_6g016240 | 26.446 | 363 | 233 | 12 | 84 | 427 | 69 | 416 | 3.09e-28 | 115 |
| MS.gene94683.t1 | MTR_7g019140 | 44.330 | 97 | 53 | 1 | 82 | 178 | 75 | 170 | 7.30e-22 | 92.4 |
| MS.gene94683.t1 | MTR_5g035120 | 45.556 | 90 | 48 | 1 | 86 | 175 | 75 | 163 | 9.64e-21 | 89.4 |
| MS.gene94683.t1 | MTR_2g022580 | 34.921 | 126 | 75 | 1 | 146 | 264 | 1 | 126 | 2.47e-16 | 75.5 |
| MS.gene94683.t1 | MTR_3g021150 | 34.906 | 106 | 61 | 2 | 284 | 386 | 6 | 106 | 1.88e-15 | 72.8 |
| MS.gene94683.t1 | MTR_5g035140 | 27.519 | 258 | 134 | 11 | 200 | 427 | 31 | 265 | 1.53e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94683.t1 | AT5G01360 | 64.371 | 421 | 144 | 2 | 13 | 427 | 14 | 434 | 0.0 | 568 |
| MS.gene94683.t1 | AT5G01360 | 70.339 | 354 | 104 | 1 | 75 | 427 | 25 | 378 | 0.0 | 546 |
| MS.gene94683.t1 | AT1G73140 | 48.442 | 353 | 174 | 3 | 76 | 427 | 60 | 405 | 1.76e-126 | 372 |
| MS.gene94683.t1 | AT3G55990 | 47.486 | 358 | 186 | 2 | 68 | 423 | 122 | 479 | 1.74e-125 | 372 |
| MS.gene94683.t1 | AT2G40150 | 47.989 | 348 | 173 | 2 | 84 | 423 | 69 | 416 | 3.47e-123 | 364 |
| MS.gene94683.t1 | AT2G40320 | 39.173 | 411 | 240 | 1 | 17 | 427 | 22 | 422 | 6.30e-119 | 353 |
| MS.gene94683.t1 | AT3G11030 | 44.348 | 345 | 191 | 1 | 84 | 427 | 104 | 448 | 3.77e-115 | 345 |
| MS.gene94683.t1 | AT2G40160 | 44.126 | 349 | 190 | 5 | 84 | 427 | 75 | 423 | 2.41e-110 | 332 |
| MS.gene94683.t1 | AT2G40160 | 44.348 | 345 | 187 | 5 | 84 | 423 | 75 | 419 | 4.25e-110 | 331 |
| MS.gene94683.t1 | AT5G01620 | 40.648 | 401 | 215 | 9 | 36 | 427 | 63 | 449 | 2.81e-108 | 327 |
| MS.gene94683.t1 | AT5G01620 | 40.648 | 401 | 215 | 9 | 36 | 427 | 63 | 449 | 2.81e-108 | 327 |
| MS.gene94683.t1 | AT5G01620 | 43.678 | 348 | 190 | 5 | 82 | 427 | 114 | 457 | 4.14e-107 | 324 |
| MS.gene94683.t1 | AT2G38320 | 42.618 | 359 | 198 | 5 | 75 | 427 | 48 | 404 | 7.87e-105 | 317 |
| MS.gene94683.t1 | AT2G38320 | 43.750 | 320 | 172 | 5 | 114 | 427 | 4 | 321 | 1.51e-94 | 287 |
| MS.gene94683.t1 | AT5G58600 | 37.571 | 354 | 204 | 8 | 79 | 427 | 59 | 400 | 5.51e-84 | 263 |
| MS.gene94683.t1 | AT2G30900 | 40.290 | 345 | 181 | 9 | 86 | 427 | 43 | 365 | 7.64e-83 | 259 |
| MS.gene94683.t1 | AT3G62390 | 38.068 | 352 | 195 | 9 | 84 | 427 | 136 | 472 | 8.90e-82 | 259 |
| MS.gene94683.t1 | AT3G54260 | 38.551 | 345 | 188 | 8 | 86 | 427 | 51 | 374 | 1.45e-81 | 256 |
| MS.gene94683.t1 | AT1G78710 | 36.705 | 346 | 196 | 7 | 82 | 427 | 34 | 356 | 1.40e-79 | 250 |
| MS.gene94683.t1 | AT3G12060 | 35.509 | 383 | 217 | 8 | 52 | 427 | 176 | 535 | 3.48e-78 | 253 |
| MS.gene94683.t1 | AT5G20590 | 36.676 | 349 | 204 | 6 | 86 | 427 | 141 | 479 | 3.58e-78 | 250 |
| MS.gene94683.t1 | AT2G34070 | 34.783 | 345 | 202 | 5 | 83 | 427 | 62 | 383 | 2.82e-77 | 245 |
| MS.gene94683.t1 | AT5G06700 | 35.677 | 384 | 222 | 9 | 52 | 427 | 228 | 594 | 4.54e-77 | 251 |
| MS.gene94683.t1 | AT2G42570 | 34.571 | 350 | 205 | 8 | 78 | 427 | 39 | 364 | 2.50e-76 | 242 |
| MS.gene94683.t1 | AT2G31110 | 34.985 | 343 | 199 | 8 | 85 | 427 | 44 | 362 | 4.92e-76 | 241 |
| MS.gene94683.t1 | AT5G49340 | 38.136 | 354 | 195 | 10 | 86 | 427 | 100 | 441 | 8.85e-76 | 243 |
| MS.gene94683.t1 | AT1G29050 | 34.783 | 345 | 201 | 6 | 83 | 427 | 58 | 378 | 5.93e-75 | 239 |
| MS.gene94683.t1 | AT3G14850 | 35.484 | 341 | 199 | 6 | 83 | 423 | 31 | 350 | 1.62e-72 | 232 |
| MS.gene94683.t1 | AT2G40160 | 44.958 | 238 | 128 | 3 | 84 | 318 | 75 | 312 | 2.67e-72 | 230 |
| MS.gene94683.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 79 | 427 | 49 | 396 | 1.52e-71 | 231 |
| MS.gene94683.t1 | AT1G48880 | 35.795 | 352 | 191 | 9 | 85 | 427 | 114 | 439 | 2.38e-71 | 231 |
| MS.gene94683.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 79 | 427 | 92 | 439 | 3.81e-71 | 231 |
| MS.gene94683.t1 | AT1G60790 | 33.512 | 373 | 217 | 10 | 71 | 427 | 175 | 532 | 1.67e-67 | 224 |
| MS.gene94683.t1 | AT3G06080 | 34.648 | 355 | 207 | 9 | 86 | 427 | 103 | 445 | 6.18e-63 | 210 |
| MS.gene94683.t1 | AT5G19160 | 33.894 | 357 | 210 | 7 | 86 | 427 | 99 | 444 | 1.94e-61 | 206 |
| MS.gene94683.t1 | AT5G06230 | 33.884 | 363 | 206 | 10 | 83 | 427 | 18 | 364 | 3.70e-60 | 200 |
| MS.gene94683.t1 | AT5G06230 | 33.884 | 363 | 206 | 10 | 83 | 427 | 59 | 405 | 9.77e-60 | 200 |
| MS.gene94683.t1 | AT3G62390 | 38.272 | 243 | 139 | 4 | 84 | 319 | 136 | 374 | 1.82e-57 | 194 |
| MS.gene94683.t1 | AT1G78710 | 31.214 | 346 | 162 | 8 | 82 | 427 | 27 | 296 | 3.89e-55 | 185 |
| MS.gene94683.t1 | AT2G30900 | 42.035 | 226 | 120 | 6 | 86 | 309 | 43 | 259 | 7.25e-54 | 181 |
| MS.gene94683.t1 | AT5G58600 | 38.174 | 241 | 140 | 5 | 79 | 318 | 59 | 291 | 7.51e-54 | 181 |
| MS.gene94683.t1 | AT3G11570 | 32.258 | 341 | 196 | 9 | 103 | 427 | 98 | 419 | 3.11e-53 | 184 |
| MS.gene94683.t1 | AT2G34070 | 32.472 | 271 | 161 | 4 | 157 | 427 | 1 | 249 | 8.94e-52 | 174 |
| MS.gene94683.t1 | AT2G31110 | 35.556 | 225 | 136 | 4 | 85 | 309 | 44 | 259 | 1.96e-51 | 174 |
| MS.gene94683.t1 | AT5G20590 | 36.667 | 240 | 143 | 3 | 86 | 318 | 141 | 378 | 4.44e-51 | 177 |
| MS.gene94683.t1 | AT5G19160 | 36.667 | 240 | 143 | 3 | 86 | 318 | 99 | 336 | 3.35e-47 | 166 |
| MS.gene94683.t1 | AT3G14850 | 32.959 | 267 | 159 | 5 | 157 | 423 | 1 | 247 | 4.35e-47 | 162 |
| MS.gene94683.t1 | AT3G06080 | 37.344 | 241 | 140 | 5 | 86 | 318 | 103 | 340 | 1.30e-45 | 161 |
| MS.gene94683.t1 | AT1G70230 | 28.169 | 355 | 228 | 9 | 82 | 427 | 75 | 411 | 8.35e-41 | 150 |
| MS.gene94683.t1 | AT5G64020 | 28.997 | 369 | 218 | 16 | 86 | 427 | 57 | 408 | 9.65e-41 | 150 |
| MS.gene94683.t1 | AT2G31110 | 33.621 | 232 | 131 | 7 | 196 | 427 | 6 | 214 | 5.27e-39 | 140 |
| MS.gene94683.t1 | AT5G06230 | 32.669 | 251 | 150 | 5 | 83 | 318 | 59 | 305 | 1.25e-38 | 142 |
| MS.gene94683.t1 | AT2G14530 | 26.722 | 363 | 233 | 10 | 83 | 427 | 59 | 406 | 6.98e-37 | 139 |
| MS.gene94683.t1 | AT1G01430 | 27.348 | 362 | 236 | 12 | 83 | 427 | 96 | 447 | 1.21e-36 | 139 |
| MS.gene94683.t1 | AT2G37720 | 27.957 | 372 | 216 | 15 | 81 | 427 | 138 | 482 | 2.06e-36 | 139 |
| MS.gene94683.t1 | AT5G64470 | 27.401 | 354 | 231 | 13 | 86 | 427 | 55 | 394 | 4.55e-36 | 137 |
| MS.gene94683.t1 | AT5G15890 | 27.708 | 397 | 245 | 13 | 50 | 427 | 149 | 522 | 9.04e-35 | 135 |
| MS.gene94683.t1 | AT3G02440 | 28.134 | 359 | 224 | 13 | 86 | 427 | 135 | 476 | 4.48e-34 | 133 |
| MS.gene94683.t1 | AT3G02440 | 27.978 | 361 | 222 | 13 | 86 | 427 | 127 | 468 | 5.51e-34 | 132 |
| MS.gene94683.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 1.01e-33 | 132 |
| MS.gene94683.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 85 | 427 | 174 | 524 | 1.01e-33 | 132 |
| MS.gene94683.t1 | AT4G01080 | 24.432 | 352 | 244 | 10 | 83 | 424 | 88 | 427 | 5.87e-33 | 129 |
| MS.gene94683.t1 | AT5G64470 | 27.072 | 362 | 228 | 15 | 86 | 427 | 55 | 400 | 2.27e-32 | 127 |
| MS.gene94683.t1 | AT5G51640 | 26.329 | 395 | 240 | 16 | 59 | 427 | 119 | 488 | 2.85e-32 | 128 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 90 | 457 | 3.06e-31 | 124 |
| MS.gene94683.t1 | AT4G23790 | 26.400 | 375 | 229 | 14 | 80 | 427 | 73 | 427 | 3.38e-31 | 124 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 166 | 533 | 5.62e-31 | 125 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 6.14e-31 | 125 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 6.14e-31 | 125 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 6.14e-31 | 125 |
| MS.gene94683.t1 | AT5G20680 | 25.064 | 391 | 252 | 15 | 55 | 427 | 184 | 551 | 6.14e-31 | 125 |
| MS.gene94683.t1 | AT5G15900 | 27.322 | 366 | 223 | 14 | 84 | 427 | 65 | 409 | 8.40e-30 | 120 |
| MS.gene94683.t1 | AT5G15900 | 27.596 | 366 | 222 | 15 | 84 | 427 | 84 | 428 | 1.07e-29 | 120 |
| MS.gene94683.t1 | AT4G11090 | 25.333 | 375 | 231 | 14 | 80 | 427 | 73 | 425 | 2.98e-29 | 119 |
| MS.gene94683.t1 | AT3G28150 | 23.502 | 434 | 257 | 15 | 17 | 427 | 29 | 410 | 1.72e-26 | 110 |
| MS.gene94683.t1 | AT5G64470 | 27.509 | 269 | 177 | 11 | 86 | 343 | 55 | 316 | 1.00e-19 | 89.7 |
| MS.gene94683.t1 | AT5G64470 | 26.449 | 276 | 186 | 10 | 86 | 350 | 55 | 324 | 1.83e-19 | 89.4 |
Find 70 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAGACTTGGGCTAAT+TGG | 0.164498 | 7.3:-36272741 | MS.gene94683:CDS |
| GAAAATTGTCTTTCTATATA+TGG | 0.208909 | 7.3:+36273842 | None:intergenic |
| GCAACATTGCCAATGGAAAA+TGG | 0.220734 | 7.3:-36273910 | MS.gene94683:CDS |
| ACAAGGTTTAAACTTGAAAA+TGG | 0.231238 | 7.3:+36274365 | None:intergenic |
| AATATTTGATTCCATGTATC+TGG | 0.237560 | 7.3:+36271771 | None:intergenic |
| CTTGGCAAGGTGCAATCTTC+TGG | 0.242629 | 7.3:+36273767 | None:intergenic |
| TCTTCAGTGTATACTGAAAA+TGG | 0.259741 | 7.3:-36271870 | MS.gene94683:CDS |
| TTTAGTCTGGTGTTCTTTCT+AGG | 0.269729 | 7.3:+36274342 | None:intergenic |
| CCTTTCCTCATGATCCCTTC+TGG | 0.271041 | 7.3:-36274504 | None:intergenic |
| ATTCTACTGGGCCCCATATC+TGG | 0.307323 | 7.3:-36273303 | MS.gene94683:CDS |
| AACACTGACATACATTTCAT+TGG | 0.355620 | 7.3:-36273272 | MS.gene94683:CDS |
| TTTGAAGACTTGGGCTAATT+GGG | 0.366796 | 7.3:-36272740 | MS.gene94683:CDS |
| CATTTACCAGAAGTCAAGAT+TGG | 0.370501 | 7.3:-36272073 | MS.gene94683:intron |
| TGTAGATTGGCTTTATTGAT+TGG | 0.377295 | 7.3:+36273879 | None:intergenic |
| GTTACGTTGATGAATGTAAC+TGG | 0.382881 | 7.3:+36271924 | None:intergenic |
| ATATCAGAATATAGAATTGA+TGG | 0.401543 | 7.3:-36271897 | MS.gene94683:CDS |
| GGGAAAAGACTACTATTTGT+AGG | 0.402810 | 7.3:-36273608 | MS.gene94683:CDS |
| GTGTTAGACTCAACCAGATA+TGG | 0.402888 | 7.3:+36273290 | None:intergenic |
| ATGCTAGTATAGAATTCTAC+TGG | 0.404319 | 7.3:-36273316 | MS.gene94683:CDS |
| ACAAGTTAGCTTTGAAGACT+TGG | 0.409219 | 7.3:-36272750 | MS.gene94683:CDS |
| CAAATAGAGATGATAATGAT+AGG | 0.414378 | 7.3:+36274447 | None:intergenic |
| CAAGTTATGTCAGTGTAGAT+TGG | 0.416949 | 7.3:+36273866 | None:intergenic |
| ATTTACCAGAAGTCAAGATT+GGG | 0.419364 | 7.3:-36272072 | MS.gene94683:intron |
| CAACATTGCCAATGGAAAAT+GGG | 0.423964 | 7.3:-36273909 | MS.gene94683:CDS |
| TATGGTGGATGAGTGGTTCT+AGG | 0.424096 | 7.3:-36273157 | MS.gene94683:CDS |
| TTCACTTCAAAGAAATCAAT+GGG | 0.450238 | 7.3:-36273582 | MS.gene94683:CDS |
| TGCATACATTGGTGTTTGCC+TGG | 0.450244 | 7.3:-36271798 | MS.gene94683:CDS |
| CTGGTGTTCTTTCTAGGACA+AGG | 0.456429 | 7.3:+36274348 | None:intergenic |
| TCATTTAGCAATGGATTTGA+AGG | 0.461734 | 7.3:-36272802 | MS.gene94683:CDS |
| ATTCACTTCAAAGAAATCAA+TGG | 0.464902 | 7.3:-36273583 | MS.gene94683:CDS |
| AGATTCTGATTATCAACATT+GGG | 0.465574 | 7.3:-36273798 | MS.gene94683:CDS |
| AAAGAAAAGGATAATAAAAG+TGG | 0.472940 | 7.3:-36273243 | MS.gene94683:CDS |
| GGAAAAGACTACTATTTGTA+GGG | 0.479501 | 7.3:-36273607 | MS.gene94683:CDS |
| TGTTAGACTCAACCAGATAT+GGG | 0.481344 | 7.3:+36273291 | None:intergenic |
| GAGATGATAATGATAGGAAA+AGG | 0.487294 | 7.3:+36274453 | None:intergenic |
| AATCAGAAATCTATGAAAAG+AGG | 0.494302 | 7.3:-36273521 | MS.gene94683:CDS |
| AAAGCTAACTTGTATGCTAC+TGG | 0.494526 | 7.3:+36272760 | None:intergenic |
| ATCAGAAATCTATGAAAAGA+GGG | 0.504271 | 7.3:-36273520 | MS.gene94683:CDS |
| CTATCAATCCAAACAAAACA+AGG | 0.508070 | 7.3:-36272708 | MS.gene94683:CDS |
| CAGATTCTGATTATCAACAT+TGG | 0.508716 | 7.3:-36273799 | MS.gene94683:CDS |
| TGCCTGGTGTTCCAGATACA+TGG | 0.510835 | 7.3:-36271782 | MS.gene94683:CDS |
| CAAGTTAGCTTTGAAGACTT+GGG | 0.522945 | 7.3:-36272749 | MS.gene94683:CDS |
| CTGATTATCAACATTGGGAG+TGG | 0.529866 | 7.3:-36273793 | MS.gene94683:CDS |
| ATGCAACATGGATTGATGAC+AGG | 0.540613 | 7.3:-36273955 | MS.gene94683:CDS |
| AGGTGATAAGAAAGTTGATG+AGG | 0.554872 | 7.3:-36273987 | MS.gene94683:CDS |
| CATTTAGCAATGGATTTGAA+GGG | 0.555614 | 7.3:-36272801 | MS.gene94683:CDS |
| TCATTGGAGATACAAAGAAA+AGG | 0.557285 | 7.3:-36273256 | MS.gene94683:CDS |
| TCATTCAGTCTTCAAAGTCA+AGG | 0.570752 | 7.3:-36273492 | MS.gene94683:intron |
| AATTGTTAAGTGAAGAAGAG+AGG | 0.575802 | 7.3:-36271842 | MS.gene94683:CDS |
| AGATGGGGTTCATTTAGCAA+TGG | 0.578823 | 7.3:-36272811 | MS.gene94683:CDS |
| GAAGAATGCAACATTGCCAA+TGG | 0.580954 | 7.3:-36273917 | MS.gene94683:CDS |
| TTCCATGTATCTGGAACACC+AGG | 0.581846 | 7.3:+36271780 | None:intergenic |
| TTTACCAGAAGTCAAGATTG+GGG | 0.598053 | 7.3:-36272071 | MS.gene94683:intron |
| CAGAAGATTGCACCTTGCCA+AGG | 0.600519 | 7.3:-36273766 | MS.gene94683:intron |
| GGAATAATGAAAATTCATAG+AGG | 0.600888 | 7.3:-36274483 | MS.gene94683:CDS |
| GAAAAGACTACTATTTGTAG+GGG | 0.609179 | 7.3:-36273606 | MS.gene94683:CDS |
| CAGTGTATACTGAAAATGGA+GGG | 0.619439 | 7.3:-36271866 | MS.gene94683:CDS |
| AAAATGCAGATTGCATACAT+TGG | 0.635099 | 7.3:-36271809 | MS.gene94683:CDS |
| ACCACTCATCCACCATACAT+AGG | 0.637859 | 7.3:+36273163 | None:intergenic |
| CAATGTCACCTACACACACA+AGG | 0.637869 | 7.3:-36272672 | MS.gene94683:intron |
| GAGAAAGACCTTGTGTGTGT+AGG | 0.641401 | 7.3:+36272664 | None:intergenic |
| GTTAGACTCAACCAGATATG+GGG | 0.642606 | 7.3:+36273292 | None:intergenic |
| TGCTAGTATAGAATTCTACT+GGG | 0.645271 | 7.3:-36273315 | MS.gene94683:CDS |
| GTGTGGAACTTACCTTGGCA+AGG | 0.655568 | 7.3:+36273754 | None:intergenic |
| TGATAAACGTATAATGAGTG+TGG | 0.658568 | 7.3:-36271976 | MS.gene94683:CDS |
| AGGAGATTGTAAATGCAACA+TGG | 0.660136 | 7.3:-36273967 | MS.gene94683:CDS |
| ACCTATGTATGGTGGATGAG+TGG | 0.661766 | 7.3:-36273164 | MS.gene94683:CDS |
| TATCAATCCAAACAAAACAA+GGG | 0.665595 | 7.3:-36272707 | MS.gene94683:CDS |
| TCAGTGTATACTGAAAATGG+AGG | 0.667022 | 7.3:-36271867 | MS.gene94683:CDS |
| TCAGAAATCTATGAAAAGAG+GGG | 0.685360 | 7.3:-36273519 | MS.gene94683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAGTGTATATTATA+AGG | + | chr7.3:36273651-36273670 | None:intergenic | 10.0% |
| !! | ATCATTGCATAAAAAATTTA+GGG | + | chr7.3:36272215-36272234 | None:intergenic | 15.0% |
| !! | CAATAAAAGTTATTACTTTA+AGG | - | chr7.3:36272849-36272868 | MS.gene94683:intron | 15.0% |
| !! | TTAATGATTTAATTCGAATA+GGG | + | chr7.3:36273145-36273164 | None:intergenic | 15.0% |
| !! | TTTAAAAAACCTTTAACAAA+CGG | + | chr7.3:36272051-36272070 | None:intergenic | 15.0% |
| !! | TTTAATGATTTAATTCGAAT+AGG | + | chr7.3:36273146-36273165 | None:intergenic | 15.0% |
| !!! | CAATTTTCTTGTATAAAAAA+TGG | - | chr7.3:36272423-36272442 | MS.gene94683:intron | 15.0% |
| !! | AAAGAAAAGGATAATAAAAG+TGG | - | chr7.3:36273007-36273026 | MS.gene94683:intron | 20.0% |
| !! | AGAAAATAACATAATTCAGT+CGG | + | chr7.3:36274016-36274035 | None:intergenic | 20.0% |
| !! | ATAGTACTAATATAGATACT+TGG | - | chr7.3:36272890-36272909 | MS.gene94683:intron | 20.0% |
| !! | ATATCAGAATATAGAATTGA+TGG | - | chr7.3:36274353-36274372 | MS.gene94683:CDS | 20.0% |
| !! | ATATTATAATGCAACAAAGA+AGG | + | chr7.3:36273950-36273969 | None:intergenic | 20.0% |
| !! | CATCATTGCATAAAAAATTT+AGG | + | chr7.3:36272216-36272235 | None:intergenic | 20.0% |
| !! | GAAAATTGTCTTTCTATATA+TGG | + | chr7.3:36272411-36272430 | None:intergenic | 20.0% |
| !!! | AGTTTTTCTTTTAACAATGT+TGG | - | chr7.3:36273851-36273870 | MS.gene94683:CDS | 20.0% |
| !!! | CTAGTTTATGAATTTTAGAT+GGG | - | chr7.3:36273423-36273442 | MS.gene94683:intron | 20.0% |
| !!! | TACATGGAATCAAATATTTT+TGG | - | chr7.3:36274484-36274503 | MS.gene94683:CDS | 20.0% |
| !!! | TAGTTTATGAATTTTAGATG+GGG | - | chr7.3:36273424-36273443 | MS.gene94683:intron | 20.0% |
| !!! | TCTAGTTTATGAATTTTAGA+TGG | - | chr7.3:36273422-36273441 | MS.gene94683:intron | 20.0% |
| !!! | TTTTATACTCTTAAACCAAA+GGG | - | chr7.3:36273380-36273399 | MS.gene94683:intron | 20.0% |
| !!! | TTTTTATACTCTTAAACCAA+AGG | - | chr7.3:36273379-36273398 | MS.gene94683:intron | 20.0% |
| ! | AATATTTGATTCCATGTATC+TGG | + | chr7.3:36274482-36274501 | None:intergenic | 25.0% |
| ! | AATCAGAAATCTATGAAAAG+AGG | - | chr7.3:36272729-36272748 | MS.gene94683:CDS | 25.0% |
| ! | ACAAGGTTTAAACTTGAAAA+TGG | + | chr7.3:36271888-36271907 | None:intergenic | 25.0% |
| ! | AGATTCTGATTATCAACATT+GGG | - | chr7.3:36272452-36272471 | MS.gene94683:intron | 25.0% |
| ! | ATCAGAAATCTATGAAAAGA+GGG | - | chr7.3:36272730-36272749 | MS.gene94683:CDS | 25.0% |
| ! | ATCTCTGAATTATTGAATGT+CGG | - | chr7.3:36272160-36272179 | MS.gene94683:intron | 25.0% |
| ! | ATTCACTTCAAAGAAATCAA+TGG | - | chr7.3:36272667-36272686 | MS.gene94683:intron | 25.0% |
| ! | CATTGTTTAATACACTTACA+AGG | + | chr7.3:36272571-36272590 | None:intergenic | 25.0% |
| ! | CGAAAATAAAGATATAGTTG+TGG | + | chr7.3:36271960-36271979 | None:intergenic | 25.0% |
| ! | GCATTATAATATATGAAGCA+CGG | - | chr7.3:36273958-36273977 | MS.gene94683:CDS | 25.0% |
| ! | GGAATAATGAAAATTCATAG+AGG | - | chr7.3:36271767-36271786 | MS.gene94683:CDS | 25.0% |
| ! | GTAATCACAATTAACATGTT+TGG | + | chr7.3:36272530-36272549 | None:intergenic | 25.0% |
| ! | TATCAATCCAAACAAAACAA+GGG | - | chr7.3:36273543-36273562 | MS.gene94683:CDS | 25.0% |
| ! | TTCACTTCAAAGAAATCAAT+GGG | - | chr7.3:36272668-36272687 | MS.gene94683:intron | 25.0% |
| !! | AATGTCATGATTTTGAATTG+CGG | - | chr7.3:36273187-36273206 | MS.gene94683:CDS | 25.0% |
| !! | CAAATAGAGATGATAATGAT+AGG | + | chr7.3:36271806-36271825 | None:intergenic | 25.0% |
| !! | GAATTTTCATTATTCCAGAA+GGG | + | chr7.3:36271763-36271782 | None:intergenic | 25.0% |
| !! | TGAATTTTCATTATTCCAGA+AGG | + | chr7.3:36271764-36271783 | None:intergenic | 25.0% |
| !! | TTCATAGATTTCTGATTTTG+AGG | + | chr7.3:36272726-36272745 | None:intergenic | 25.0% |
| !! | TTGTTTTCAATACCTATGTA+TGG | - | chr7.3:36273075-36273094 | MS.gene94683:intron | 25.0% |
| !!! | TCTCTTCTAAAGTATTTTCT+TGG | - | chr7.3:36273607-36273626 | MS.gene94683:CDS | 25.0% |
| !!! | TTCATCATGGTTTTAAATTG+CGG | + | chr7.3:36273333-36273352 | None:intergenic | 25.0% |
| AAAATGCAGATTGCATACAT+TGG | - | chr7.3:36274441-36274460 | MS.gene94683:CDS | 30.0% | |
| AACACTGACATACATTTCAT+TGG | - | chr7.3:36272978-36272997 | MS.gene94683:intron | 30.0% | |
| AAGTAGACTAAATATTGCAG+TGG | + | chr7.3:36273731-36273750 | None:intergenic | 30.0% | |
| AATTGTTAAGTGAAGAAGAG+AGG | - | chr7.3:36274408-36274427 | MS.gene94683:CDS | 30.0% | |
| ATGCTAGTATAGAATTCTAC+TGG | - | chr7.3:36272934-36272953 | MS.gene94683:intron | 30.0% | |
| ATTTACCAGAAGTCAAGATT+GGG | - | chr7.3:36274178-36274197 | MS.gene94683:intron | 30.0% | |
| CAATTAACATGTTTGGACAT+TGG | + | chr7.3:36272523-36272542 | None:intergenic | 30.0% | |
| CAGATTCTGATTATCAACAT+TGG | - | chr7.3:36272451-36272470 | MS.gene94683:intron | 30.0% | |
| CATATTTCACCGCAATATAA+TGG | + | chr7.3:36273237-36273256 | None:intergenic | 30.0% | |
| CTATCAATCCAAACAAAACA+AGG | - | chr7.3:36273542-36273561 | MS.gene94683:CDS | 30.0% | |
| GAAAAGACTACTATTTGTAG+GGG | - | chr7.3:36272644-36272663 | MS.gene94683:intron | 30.0% | |
| GGAAAAGACTACTATTTGTA+GGG | - | chr7.3:36272643-36272662 | MS.gene94683:intron | 30.0% | |
| GTGAGTATTATAAATCTCAG+AGG | + | chr7.3:36273783-36273802 | None:intergenic | 30.0% | |
| TAGCACTCAAAAAACTTCAA+GGG | - | chr7.3:36272622-36272641 | MS.gene94683:intron | 30.0% | |
| TCAAAGAGAGAGCAAAAAAT+TGG | - | chr7.3:36273036-36273055 | MS.gene94683:intron | 30.0% | |
| TCAGAAATCTATGAAAAGAG+GGG | - | chr7.3:36272731-36272750 | MS.gene94683:CDS | 30.0% | |
| TCATTGGAGATACAAAGAAA+AGG | - | chr7.3:36272994-36273013 | MS.gene94683:intron | 30.0% | |
| TCATTGTTGAATGTTCATCA+TGG | + | chr7.3:36273346-36273365 | None:intergenic | 30.0% | |
| TCTTCAGTGTATACTGAAAA+TGG | - | chr7.3:36274380-36274399 | MS.gene94683:CDS | 30.0% | |
| TGATAAACGTATAATGAGTG+TGG | - | chr7.3:36274274-36274293 | MS.gene94683:intron | 30.0% | |
| TGCTAGTATAGAATTCTACT+GGG | - | chr7.3:36272935-36272954 | MS.gene94683:intron | 30.0% | |
| TTAAACCAAAGGGATGAAAA+TGG | - | chr7.3:36273390-36273409 | MS.gene94683:intron | 30.0% | |
| TTAGCACTCAAAAAACTTCA+AGG | - | chr7.3:36272621-36272640 | MS.gene94683:intron | 30.0% | |
| ! | AAATACCATTTTCATCCCTT+TGG | + | chr7.3:36273398-36273417 | None:intergenic | 30.0% |
| ! | AATTTAGGGTCCATTTGATA+CGG | + | chr7.3:36272201-36272220 | None:intergenic | 30.0% |
| ! | ATGGGAATCTTTTGTATGTT+TGG | - | chr7.3:36272686-36272705 | MS.gene94683:CDS | 30.0% |
| ! | CATTTAGCAATGGATTTGAA+GGG | - | chr7.3:36273449-36273468 | MS.gene94683:intron | 30.0% |
| ! | CTTTTGTATGTTTGGTAGAA+TGG | - | chr7.3:36272694-36272713 | MS.gene94683:CDS | 30.0% |
| ! | GAGATGATAATGATAGGAAA+AGG | + | chr7.3:36271800-36271819 | None:intergenic | 30.0% |
| ! | GTTAAAAACCCATTTTCCAT+TGG | + | chr7.3:36272352-36272371 | None:intergenic | 30.0% |
| ! | TCATTTAGCAATGGATTTGA+AGG | - | chr7.3:36273448-36273467 | MS.gene94683:intron | 30.0% |
| ! | TTTTCAATACCTATGTATGG+TGG | - | chr7.3:36273078-36273097 | MS.gene94683:intron | 30.0% |
| ! | TTTTTACGATCCGTATCAAA+TGG | - | chr7.3:36272188-36272207 | MS.gene94683:intron | 30.0% |
| !! | AGACTTACTTGATTTTAGTC+TGG | + | chr7.3:36271924-36271943 | None:intergenic | 30.0% |
| !! | AGTGAGAAAAAAGAAGCATT+GGG | - | chr7.3:36274241-36274260 | MS.gene94683:intron | 30.0% |
| !! | GAATTTGTTTAAGCCTTGTT+TGG | + | chr7.3:36272830-36272849 | None:intergenic | 30.0% |
| !! | TGTAGATTGGCTTTATTGAT+TGG | + | chr7.3:36272374-36272393 | None:intergenic | 30.0% |
| !! | TTAAGCCTTGTTTGGATAAA+CGG | + | chr7.3:36272822-36272841 | None:intergenic | 30.0% |
| AACTGCTTCGAATGAAAAGT+TGG | - | chr7.3:36272098-36272117 | MS.gene94683:intron | 35.0% | |
| ACACTTACAAGGCTAAAAGA+TGG | + | chr7.3:36272560-36272579 | None:intergenic | 35.0% | |
| AGGAGATTGTAAATGCAACA+TGG | - | chr7.3:36272283-36272302 | MS.gene94683:intron | 35.0% | |
| AGTCAATGTAGCCACAATTA+CGG | - | chr7.3:36273266-36273285 | MS.gene94683:CDS | 35.0% | |
| ATACTTGGATGTGTTGTAAC+AGG | - | chr7.3:36272905-36272924 | MS.gene94683:intron | 35.0% | |
| ATAGTGCTCAACAAATCTCT+AGG | + | chr7.3:36274120-36274139 | None:intergenic | 35.0% | |
| ATCACCTGCATTAGACTTAA+TGG | - | chr7.3:36273818-36273837 | MS.gene94683:CDS | 35.0% | |
| CAACATTGCCAATGGAAAAT+GGG | - | chr7.3:36272341-36272360 | MS.gene94683:intron | 35.0% | |
| CAAGTTATGTCAGTGTAGAT+TGG | + | chr7.3:36272387-36272406 | None:intergenic | 35.0% | |
| CAATTGCAGCCACAATATAA+CGG | + | chr7.3:36273300-36273319 | None:intergenic | 35.0% | |
| CAGTGTATACTGAAAATGGA+GGG | - | chr7.3:36274384-36274403 | MS.gene94683:CDS | 35.0% | |
| CATGTAGAAAATTGCTTGCA+AGG | - | chr7.3:36273876-36273895 | MS.gene94683:CDS | 35.0% | |
| CATTTACCAGAAGTCAAGAT+TGG | - | chr7.3:36274177-36274196 | MS.gene94683:intron | 35.0% | |
| GGGAAAAGACTACTATTTGT+AGG | - | chr7.3:36272642-36272661 | MS.gene94683:intron | 35.0% | |
| TCAGTGTATACTGAAAATGG+AGG | - | chr7.3:36274383-36274402 | MS.gene94683:CDS | 35.0% | |
| TCATTCAGTCTTCAAAGTCA+AGG | - | chr7.3:36272758-36272777 | MS.gene94683:CDS | 35.0% | |
| TGATGAGTAGGAATTGTACT+CGG | - | chr7.3:36273755-36273774 | MS.gene94683:intron | 35.0% | |
| TGTTAGACTCAACCAGATAT+GGG | + | chr7.3:36272962-36272981 | None:intergenic | 35.0% | |
| TTAAGTCTAATGCAGGTGAT+TGG | + | chr7.3:36273818-36273837 | None:intergenic | 35.0% | |
| TTTACCAGAAGTCAAGATTG+GGG | - | chr7.3:36274179-36274198 | MS.gene94683:intron | 35.0% | |
| TTTAGCCGTTTATCCAAACA+AGG | - | chr7.3:36272814-36272833 | MS.gene94683:intron | 35.0% | |
| TTTAGTCTGGTGTTCTTTCT+AGG | + | chr7.3:36271911-36271930 | None:intergenic | 35.0% | |
| TTTCACCGCAATATAATGGT+TGG | + | chr7.3:36273233-36273252 | None:intergenic | 35.0% | |
| TTTGAAGACTTGGGCTAATT+GGG | - | chr7.3:36273510-36273529 | MS.gene94683:CDS | 35.0% | |
| ! | AAAGCTAACTTGTATGCTAC+TGG | + | chr7.3:36273493-36273512 | None:intergenic | 35.0% |
| ! | AGTTCTCATCCGTTTGTTAA+AGG | - | chr7.3:36272039-36272058 | MS.gene94683:CDS | 35.0% |
| ! | CAGTGAGAAAAAAGAAGCAT+TGG | - | chr7.3:36274240-36274259 | MS.gene94683:intron | 35.0% |
| ! | CTTGCAAGCAATTTTCTACA+TGG | + | chr7.3:36273878-36273897 | None:intergenic | 35.0% |
| ! | GTTACGTTGATGAATGTAAC+TGG | + | chr7.3:36274329-36274348 | None:intergenic | 35.0% |
| ! | TGTATGCAATCTGCATTTTG+TGG | + | chr7.3:36274440-36274459 | None:intergenic | 35.0% |
| !! | ACAAGTTAGCTTTGAAGACT+TGG | - | chr7.3:36273500-36273519 | MS.gene94683:CDS | 35.0% |
| !! | AGGTGATAAGAAAGTTGATG+AGG | - | chr7.3:36272263-36272282 | MS.gene94683:intron | 35.0% |
| !! | CAAGTTAGCTTTGAAGACTT+GGG | - | chr7.3:36273501-36273520 | MS.gene94683:CDS | 35.0% |
| !! | GTGAGAAAAAAGAAGCATTG+GGG | - | chr7.3:36274242-36274261 | MS.gene94683:intron | 35.0% |
| !!! | AAGAAGACCCTTGTTTTGTT+TGG | + | chr7.3:36273553-36273572 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGAGTGCTAACAC+TGG | + | chr7.3:36272618-36272637 | None:intergenic | 35.0% |
| !!! | CAATGCTTCTTTTTTCTCAC+TGG | + | chr7.3:36274242-36274261 | None:intergenic | 35.0% |
| !!! | GTCTACTTTTTGTGATGAGT+AGG | - | chr7.3:36273743-36273762 | MS.gene94683:intron | 35.0% |
| AGATGGGGTTCATTTAGCAA+TGG | - | chr7.3:36273439-36273458 | MS.gene94683:intron | 40.0% | |
| AGCAAAAAATTGGACAGGAG+TGG | - | chr7.3:36273046-36273065 | MS.gene94683:intron | 40.0% | |
| ATGATGCACAGATACAGACA+CGG | + | chr7.3:36274088-36274107 | None:intergenic | 40.0% | |
| CAACTTTCTTATCACCTGCT+AGG | + | chr7.3:36272260-36272279 | None:intergenic | 40.0% | |
| CTGATTATCAACATTGGGAG+TGG | - | chr7.3:36272457-36272476 | MS.gene94683:intron | 40.0% | |
| GAAGAATGCAACATTGCCAA+TGG | - | chr7.3:36272333-36272352 | MS.gene94683:intron | 40.0% | |
| GAGAGAGCAAAAAATTGGAC+AGG | - | chr7.3:36273041-36273060 | MS.gene94683:intron | 40.0% | |
| GCAACATTGCCAATGGAAAA+TGG | - | chr7.3:36272340-36272359 | MS.gene94683:intron | 40.0% | |
| GCTTCCATTAAGTCTAATGC+AGG | + | chr7.3:36273825-36273844 | None:intergenic | 40.0% | |
| GTGTTAGACTCAACCAGATA+TGG | + | chr7.3:36272963-36272982 | None:intergenic | 40.0% | |
| GTTAGACTCAACCAGATATG+GGG | + | chr7.3:36272961-36272980 | None:intergenic | 40.0% | |
| TGTATTGTGATTGTCCTAGC+AGG | - | chr7.3:36272243-36272262 | MS.gene94683:intron | 40.0% | |
| TTGAATTGCGGTTGTAGTTG+CGG | - | chr7.3:36273199-36273218 | MS.gene94683:CDS | 40.0% | |
| ! | ATGCAACATGGATTGATGAC+AGG | - | chr7.3:36272295-36272314 | MS.gene94683:intron | 40.0% |
| ! | CGTATGCTACTTGACTCTAA+AGG | - | chr7.3:36271978-36271997 | MS.gene94683:CDS | 40.0% |
| ! | CTTTGAAGACTTGGGCTAAT+TGG | - | chr7.3:36273509-36273528 | MS.gene94683:CDS | 40.0% |
| !! | AAAAAGAAGCATTGGGGAAC+TGG | - | chr7.3:36274248-36274267 | MS.gene94683:intron | 40.0% |
| ACCACTCATCCACCATACAT+AGG | + | chr7.3:36273090-36273109 | None:intergenic | 45.0% | |
| CAATGTCACCTACACACACA+AGG | - | chr7.3:36273578-36273597 | MS.gene94683:CDS | 45.0% | |
| CATGTTTGGACATTGGAGTG+TGG | + | chr7.3:36272516-36272535 | None:intergenic | 45.0% | |
| CGCTGCCAACCATTATATTG+CGG | - | chr7.3:36273225-36273244 | MS.gene94683:CDS | 45.0% | |
| GAGAAAGACCTTGTGTGTGT+AGG | + | chr7.3:36273589-36273608 | None:intergenic | 45.0% | |
| GTTGTGAGGCCGTTATATTG+TGG | - | chr7.3:36273288-36273307 | MS.gene94683:CDS | 45.0% | |
| GTTTCCCCAATCTTGACTTC+TGG | + | chr7.3:36274186-36274205 | None:intergenic | 45.0% | |
| TAGCCACAATTACGGTTGTG+AGG | - | chr7.3:36273274-36273293 | MS.gene94683:CDS | 45.0% | |
| TTGGAGTGTGGAACTTACCT+TGG | + | chr7.3:36272504-36272523 | None:intergenic | 45.0% | |
| ! | TGCATACATTGGTGTTTGCC+TGG | - | chr7.3:36274452-36274471 | MS.gene94683:CDS | 45.0% |
| ! | TTCCATGTATCTGGAACACC+AGG | + | chr7.3:36274473-36274492 | None:intergenic | 45.0% |
| !! | ACCTATGTATGGTGGATGAG+TGG | - | chr7.3:36273086-36273105 | MS.gene94683:intron | 45.0% |
| !! | CTGGTGTTCTTTCTAGGACA+AGG | + | chr7.3:36271905-36271924 | None:intergenic | 45.0% |
| !! | TATGGTGGATGAGTGGTTCT+AGG | - | chr7.3:36273093-36273112 | MS.gene94683:intron | 45.0% |
| ATTCTACTGGGCCCCATATC+TGG | - | chr7.3:36272947-36272966 | MS.gene94683:intron | 50.0% | |
| CAGAAGATTGCACCTTGCCA+AGG | - | chr7.3:36272484-36272503 | MS.gene94683:intron | 50.0% | |
| CTTGGCAAGGTGCAATCTTC+TGG | + | chr7.3:36272486-36272505 | None:intergenic | 50.0% | |
| GTGTGGAACTTACCTTGGCA+AGG | + | chr7.3:36272499-36272518 | None:intergenic | 50.0% | |
| TGCCTGGTGTTCCAGATACA+TGG | - | chr7.3:36274468-36274487 | MS.gene94683:CDS | 50.0% | |
| TGTGGCTGCAATTGCGATTG+TGG | - | chr7.3:36273306-36273325 | MS.gene94683:CDS | 50.0% | |
| CACGGACACCAGACATGACA+CGG | + | chr7.3:36274070-36274089 | None:intergenic | 55.0% | |
| CGGCCTCACAACCGTAATTG+TGG | + | chr7.3:36273280-36273299 | None:intergenic | 55.0% | |
| GTCAGTGTCCGTGTCATGTC+TGG | - | chr7.3:36274059-36274078 | MS.gene94683:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 36271755 | 36274517 | 36271755 | ID=MS.gene94683 |
| chr7.3 | mRNA | 36271755 | 36274517 | 36271755 | ID=MS.gene94683.t1;Parent=MS.gene94683 |
| chr7.3 | exon | 36274337 | 36274517 | 36274337 | ID=MS.gene94683.t1.exon1;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36274337 | 36274517 | 36274337 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| chr7.3 | exon | 36273767 | 36274007 | 36273767 | ID=MS.gene94683.t1.exon2;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36273767 | 36274007 | 36273767 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| chr7.3 | exon | 36273493 | 36273664 | 36273493 | ID=MS.gene94683.t1.exon3;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36273493 | 36273664 | 36273493 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| chr7.3 | exon | 36273146 | 36273345 | 36273146 | ID=MS.gene94683.t1.exon4;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36273146 | 36273345 | 36273146 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| chr7.3 | exon | 36272673 | 36272831 | 36272673 | ID=MS.gene94683.t1.exon5;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36272673 | 36272831 | 36272673 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| chr7.3 | exon | 36271755 | 36272085 | 36271755 | ID=MS.gene94683.t1.exon6;Parent=MS.gene94683.t1 |
| chr7.3 | CDS | 36271755 | 36272085 | 36271755 | ID=cds.MS.gene94683.t1;Parent=MS.gene94683.t1 |
| Gene Sequence |
| Protein sequence |
