AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95053

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95053.t1 MTR_4g134580 94.595 296 13 2 80 374 72 365 0.0 532
MS.gene95053.t1 MTR_1g077020 42.324 241 82 5 117 357 5 188 1.69e-60 193
MS.gene95053.t1 MTR_5g020510 41.393 244 105 6 114 357 92 297 6.58e-53 177
MS.gene95053.t1 MTR_3g100650 40.574 244 104 5 112 355 71 273 4.99e-51 172
MS.gene95053.t1 MTR_5g065440 40.891 247 101 7 119 355 56 267 1.49e-49 168
MS.gene95053.t1 MTR_7g010300 70.312 64 19 0 293 356 220 283 4.12e-26 107
MS.gene95053.t1 MTR_6g012280 59.211 76 30 1 293 368 222 296 1.57e-24 102
MS.gene95053.t1 MTR_5g032600 73.077 52 14 0 119 170 76 127 1.57e-22 96.3
MS.gene95053.t1 MTR_8g467340 58.824 68 28 0 293 360 271 338 2.20e-22 97.8
MS.gene95053.t1 MTR_3g039810 57.534 73 29 1 104 174 1 73 3.64e-20 84.3
MS.gene95053.t1 MTR_8g069380 58.730 63 26 0 293 355 52 114 2.44e-19 83.2
MS.gene95053.t1 MTR_8g069080 53.731 67 29 1 106 170 52 118 2.69e-19 87.0
MS.gene95053.t1 MTR_2g076780 58.621 58 24 0 113 170 29 86 6.10e-19 85.5
MS.gene95053.t1 MTR_6g073013 54.098 61 27 1 293 352 101 161 1.08e-18 83.2
MS.gene95053.t1 MTR_6g073013 60.000 50 19 1 121 169 19 68 1.65e-14 71.6
MS.gene95053.t1 MTR_8g051480 59.677 62 24 1 294 355 68 128 5.39e-18 79.7
MS.gene95053.t1 MTR_6g012220 61.538 52 16 1 118 169 18 65 4.71e-14 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95053.t1 AT2G02540 47.390 249 90 5 109 355 75 284 3.52e-67 215
MS.gene95053.t1 AT2G02540 47.390 249 90 5 109 355 75 284 3.52e-67 215
MS.gene95053.t1 AT1G14440 48.374 246 67 7 118 355 87 280 1.04e-61 201
MS.gene95053.t1 AT1G14440 48.374 246 67 7 118 355 87 280 1.04e-61 201
MS.gene95053.t1 AT2G18350 37.102 283 101 8 87 357 45 262 1.08e-47 163
MS.gene95053.t1 AT1G69600 36.992 246 96 7 119 358 29 221 1.24e-42 149
MS.gene95053.t1 AT5G60480 31.356 236 96 7 117 350 33 204 1.09e-30 117
MS.gene95053.t1 AT1G75240 78.571 56 12 0 118 173 73 128 3.50e-26 107
MS.gene95053.t1 AT4G24660 64.516 62 22 0 294 355 158 219 8.77e-24 98.6
MS.gene95053.t1 AT4G24660 72.222 54 15 0 119 172 47 100 9.35e-23 95.5
MS.gene95053.t1 AT4G24660 56.164 73 32 0 294 366 158 230 4.83e-23 96.7
MS.gene95053.t1 AT4G24660 72.222 54 15 0 119 172 47 100 9.39e-23 95.9
MS.gene95053.t1 AT5G65410 60.317 63 25 0 292 354 190 252 1.23e-22 96.7
MS.gene95053.t1 AT5G65410 69.811 53 16 0 119 171 73 125 6.70e-21 92.0
MS.gene95053.t1 AT5G39760 51.220 82 38 1 293 372 200 281 2.67e-21 94.0
MS.gene95053.t1 AT5G15210 63.158 57 21 0 293 349 179 235 4.22e-21 92.4
MS.gene95053.t1 AT5G15210 61.818 55 19 1 118 170 53 107 6.74e-16 77.4
MS.gene95053.t1 AT1G74660 67.857 56 18 0 119 174 37 92 5.04e-21 87.0
MS.gene95053.t1 AT1G74660 66.667 57 19 0 119 175 37 93 5.61e-21 87.4
MS.gene95053.t1 AT3G28917 66.667 57 18 1 119 174 31 87 1.71e-20 85.9
MS.gene95053.t1 AT3G28920 60.000 60 24 0 293 352 192 251 2.67e-20 90.9
MS.gene95053.t1 AT3G50890 65.455 55 19 0 119 173 58 112 6.60e-20 88.6
MS.gene95053.t1 AT3G50890 47.368 57 30 0 298 354 186 242 1.97e-14 72.8
MS.gene95053.t1 AT1G18835 63.158 57 18 1 119 175 24 77 8.42e-17 75.5
MS.gene95053.t1 AT5G42780 60.784 51 18 1 121 171 64 112 3.86e-13 68.9
MS.gene95053.t1 AT5G42780 42.424 66 38 0 287 352 173 238 7.73e-13 68.2

Find 88 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCATTAACTGAAGGGTTT+TGG 0.183475 8.2:+260751 None:intergenic
TTATTATTATTGTGGTTTAT+TGG 0.190415 8.2:+260948 None:intergenic
TATTATTATTGTGGTTTATT+GGG 0.222211 8.2:+260949 None:intergenic
CCCCAAAACCCTTCAGTTAA+TGG 0.254181 8.2:-260753 MS.gene95053:CDS
GGTTTATTGGGATTGGTATT+GGG 0.275275 8.2:+260961 None:intergenic
CCTGATCAGGCTCTTGGTCT+TGG 0.311106 8.2:-260375 MS.gene95053:CDS
TGGTTTATTGGGATTGGTAT+TGG 0.332251 8.2:+260960 None:intergenic
CTCTTCTTGTTCATCAGATT+CGG 0.338219 8.2:+260212 None:intergenic
AATGGTTCCTTGTTCACCAC+TGG 0.354032 8.2:+260560 None:intergenic
GTTGCTGCTGATGCTGTATT+AGG 0.369444 8.2:+260330 None:intergenic
CCTCTTCCTGATCAGGCTCT+TGG 0.375629 8.2:-260381 MS.gene95053:CDS
GTATTGGGATTTCTCCATCT+TGG 0.385212 8.2:+260976 None:intergenic
CATGTTACCTCTTCCTGATC+AGG 0.387160 8.2:-260388 MS.gene95053:CDS
CCTTCAACTTCAACTTCAAC+AGG 0.390687 8.2:-260437 MS.gene95053:CDS
CCTGTTGAAGTTGAAGTTGA+AGG 0.398274 8.2:+260437 None:intergenic
TGGTGTAGTGGAGGAGGATG+AGG 0.421641 8.2:+260846 None:intergenic
GATTTCTCCATCTTGGCTGT+TGG 0.421739 8.2:+260983 None:intergenic
ACTACTACTGCCACTGGTAC+TGG 0.429757 8.2:+260777 None:intergenic
TTATTGTGGTTTATTGGGAT+TGG 0.433341 8.2:+260954 None:intergenic
AGAGCAGTTGAGTGCTTCAA+TGG 0.440838 8.2:+260542 None:intergenic
AATAATTATGGTACTAGTAA+TGG 0.445222 8.2:-260912 MS.gene95053:CDS
AAAGAAGAGTGCTCAAGGTT+TGG 0.446033 8.2:-259984 MS.gene95053:CDS
GAAGGTATGTTGTAGTTGAA+TGG 0.452483 8.2:+260234 None:intergenic
CCTGATCCTCAGTCTCACCT+TGG 0.455452 8.2:+260481 None:intergenic
CCAAGACCAAGAGCCTGATC+AGG 0.460517 8.2:+260375 None:intergenic
CCAAGGTGAGACTGAGGATC+AGG 0.460530 8.2:-260481 MS.gene95053:CDS
AACTGATGACGATTTCTTGT+AGG 0.461489 8.2:+260665 None:intergenic
TAGTGATGAAGAAAAGGTTC+AGG 0.467781 8.2:-260125 MS.gene95053:CDS
CAACAGTTCTGCCAAGAGAT+TGG 0.479137 8.2:-260012 MS.gene95053:CDS
TAGGAGTAGAGTGGTGGTGT+TGG 0.483759 8.2:+260349 None:intergenic
AATACAGCATCAGCAGCAAC+AGG 0.487107 8.2:-260327 MS.gene95053:CDS
AGGAGGTAGTGATGAAGAAA+AGG 0.488273 8.2:-260131 MS.gene95053:CDS
AAGAATCATGCAGCTGCAAT+GGG 0.493612 8.2:-260618 MS.gene95053:CDS
ATGGTTCCTTGTTCACCACT+GGG 0.498200 8.2:+260561 None:intergenic
AAAGAATCATGCAGCTGCAA+TGG 0.500219 8.2:-260619 MS.gene95053:CDS
CGCAGTAGTGCCAGTACCAG+TGG 0.506274 8.2:-260787 MS.gene95053:CDS
GGCAGCACCACCACAGCATG+AGG 0.512800 8.2:-260416 MS.gene95053:CDS
GAACTTTCCAACAGCCAAGA+TGG 0.514451 8.2:-260990 MS.gene95053:CDS
CAAGCAGCAGCTGTTAGTAC+TGG 0.515000 8.2:-260714 MS.gene95053:CDS
TGGGGTACTACTACTGCCAC+TGG 0.521167 8.2:+260771 None:intergenic
AGAGCTGTAGCGCCACCTCA+TGG 0.521678 8.2:-260276 MS.gene95053:CDS
GGTGTAGTGGAGGAGGATGA+GGG 0.535345 8.2:+260847 None:intergenic
GGTGGCGCTACAGCTCTAGA+AGG 0.538474 8.2:+260282 None:intergenic
CGAATCTGATGAACAAGAAG+AGG 0.550515 8.2:-260211 MS.gene95053:CDS
ATATAATATTACTGTGATTG+TGG 0.551597 8.2:+260826 None:intergenic
GAAGTTTCTGTGACAATGGC+AGG 0.555632 8.2:+260518 None:intergenic
CCAAGAGCCTGATCAGGAAG+AGG 0.556475 8.2:+260381 None:intergenic
TCTTGTTCATCAGATTCGGA+AGG 0.560538 8.2:+260216 None:intergenic
CTAACAGCTGCTGCTTGCAT+AGG 0.566961 8.2:+260720 None:intergenic
AAAATTCACACAGGAACAGA+AGG 0.568057 8.2:-260100 MS.gene95053:CDS
GTGGTTGTGCCATTAACTGA+AGG 0.568135 8.2:+260744 None:intergenic
TGATTGTGGTGTAGTGGAGG+AGG 0.569506 8.2:+260840 None:intergenic
TTCATGCCCAGTGGTGAACA+AGG 0.570431 8.2:-260567 MS.gene95053:CDS
TGTGGAAGTTTCTGTGACAA+TGG 0.570726 8.2:+260514 None:intergenic
CAAGAAATCGTCATCAGTTG+TGG 0.580092 8.2:-260661 MS.gene95053:CDS
GATGAACAAGAAGAGGCAGC+AGG 0.580135 8.2:-260204 MS.gene95053:CDS
TGGTTGTGCCATTAACTGAA+GGG 0.581647 8.2:+260745 None:intergenic
TGATGACGATTTCTTGTAGG+AGG 0.584121 8.2:+260668 None:intergenic
CTGTGATTGTGGTGTAGTGG+AGG 0.591651 8.2:+260837 None:intergenic
AATCATGCAGCTGCAATGGG+AGG 0.592565 8.2:-260615 MS.gene95053:CDS
GTAGCGCCACCTCATGGACA+TGG 0.593213 8.2:-260270 MS.gene95053:CDS
TGAATTTCCTCATGCTGTGG+TGG 0.602127 8.2:+260409 None:intergenic
TGTGAAAAGAAGAGTGCTCA+AGG 0.602235 8.2:-259989 MS.gene95053:CDS
ATCATGCAGCTGCAATGGGA+GGG 0.602761 8.2:-260614 MS.gene95053:CDS
ATGGAAATTTCAGAAGCAAG+AGG 0.613533 8.2:-260046 MS.gene95053:CDS
GGGAATGCCACAGATGGCTG+TGG 0.614228 8.2:-260594 MS.gene95053:CDS
TTACTGTGATTGTGGTGTAG+TGG 0.616570 8.2:+260834 None:intergenic
TGAAGTTGAAGGCTGAGTGA+TGG 0.622721 8.2:+260448 None:intergenic
AGTTGAAGGCTGAGTGATGG+TGG 0.623553 8.2:+260451 None:intergenic
ATGGGAGGGAATGCCACAGA+TGG 0.625053 8.2:-260600 MS.gene95053:CDS
AGCTGCTGCTTGCATAGGAG+TGG 0.626710 8.2:+260725 None:intergenic
AGAAGTCCAAGGTGAGACTG+AGG 0.639644 8.2:-260487 MS.gene95053:CDS
GGTGTTCATGAACATGATGA+TGG 0.640624 8.2:+260868 None:intergenic
AGCAGCTGTTAGTACTGGTG+TGG 0.641970 8.2:-260709 MS.gene95053:CDS
CACTGGTACTGGCACTACTG+CGG 0.649774 8.2:+260788 None:intergenic
TTCCACAGAAAAGAAGTCCA+AGG 0.650236 8.2:-260498 MS.gene95053:CDS
TCAGAAGCAAGAGGAATCTG+TGG 0.650938 8.2:-260037 MS.gene95053:CDS
AGTTGAATGGCATGATGATG+TGG 0.657862 8.2:+260247 None:intergenic
ATGTGGCCATGTCCATGAGG+TGG 0.659218 8.2:+260264 None:intergenic
ACATGAATTTCCTCATGCTG+TGG 0.665457 8.2:+260406 None:intergenic
AATCGTCATCAGTTGTGGTG+AGG 0.674142 8.2:-260656 MS.gene95053:CDS
CTGTATTAGGAGTAGAGTGG+TGG 0.678813 8.2:+260343 None:intergenic
TGTGGTGAGTTCATGCCCAG+TGG 0.682320 8.2:-260576 MS.gene95053:CDS
TATGGTACTAGTAATGGACA+TGG 0.682582 8.2:-260906 MS.gene95053:CDS
GAACTCACCACAGCCATCTG+TGG 0.688684 8.2:+260587 None:intergenic
GTTCAGGACAAAATTCACAC+AGG 0.704613 8.2:-260109 MS.gene95053:CDS
ATGCTGTATTAGGAGTAGAG+TGG 0.716681 8.2:+260340 None:intergenic
ATGATGTGGCCATGTCCATG+AGG 0.730801 8.2:+260261 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATTA+TGG - chr8.2:259960-259979 MS.gene95053:CDS 0.0%
!! TATTATTATTGTGGTTTATT+GGG + chr8.2:259938-259957 None:intergenic 15.0%
!! TTATTATTATTGTGGTTTAT+TGG + chr8.2:259939-259958 None:intergenic 15.0%
!! AATAATTATGGTACTAGTAA+TGG - chr8.2:259972-259991 MS.gene95053:CDS 20.0%
!! ATATAATATTACTGTGATTG+TGG + chr8.2:260061-260080 None:intergenic 20.0%
!!! TTCATGTTGAAGTTGTTTTT+TGG + chr8.2:260951-260970 None:intergenic 25.0%
TTATTGTGGTTTATTGGGAT+TGG + chr8.2:259933-259952 None:intergenic 30.0%
! TTCAATTTTGCTGAGAAAGT+TGG - chr8.2:260815-260834 MS.gene95053:CDS 30.0%
AAAATTCACACAGGAACAGA+AGG - chr8.2:260784-260803 MS.gene95053:CDS 35.0%
ATGGAAATTTCAGAAGCAAG+AGG - chr8.2:260838-260857 MS.gene95053:CDS 35.0%
CTCTTCTTGTTCATCAGATT+CGG + chr8.2:260675-260694 None:intergenic 35.0%
TAGTGATGAAGAAAAGGTTC+AGG - chr8.2:260759-260778 MS.gene95053:CDS 35.0%
! AACTGATGACGATTTCTTGT+AGG + chr8.2:260222-260241 None:intergenic 35.0%
! ATTTTGCTGAGAAAGTTGGA+TGG - chr8.2:260819-260838 MS.gene95053:CDS 35.0%
! GAAGGTATGTTGTAGTTGAA+TGG + chr8.2:260653-260672 None:intergenic 35.0%
! GGTTTATTGGGATTGGTATT+GGG + chr8.2:259926-259945 None:intergenic 35.0%
! TGGTTTATTGGGATTGGTAT+TGG + chr8.2:259927-259946 None:intergenic 35.0%
! TTCTTTTCACACCAATCTCT+TGG + chr8.2:260886-260905 None:intergenic 35.0%
!! TATGGTACTAGTAATGGACA+TGG - chr8.2:259978-259997 MS.gene95053:CDS 35.0%
AAAGAATCATGCAGCTGCAA+TGG - chr8.2:260265-260284 MS.gene95053:CDS 40.0%
AAGAATCATGCAGCTGCAAT+GGG - chr8.2:260266-260285 MS.gene95053:CDS 40.0%
ACATGAATTTCCTCATGCTG+TGG + chr8.2:260481-260500 None:intergenic 40.0%
AGGAGGTAGTGATGAAGAAA+AGG - chr8.2:260753-260772 MS.gene95053:CDS 40.0%
ATGCTGTATTAGGAGTAGAG+TGG + chr8.2:260547-260566 None:intergenic 40.0%
CAAGAAATCGTCATCAGTTG+TGG - chr8.2:260223-260242 MS.gene95053:CDS 40.0%
CCTGTTGAAGTTGAAGTTGA+AGG + chr8.2:260450-260469 None:intergenic 40.0%
CCTTCAACTTCAACTTCAAC+AGG - chr8.2:260447-260466 MS.gene95053:CDS 40.0%
CGAATCTGATGAACAAGAAG+AGG - chr8.2:260673-260692 MS.gene95053:CDS 40.0%
GGTGTTCATGAACATGATGA+TGG + chr8.2:260019-260038 None:intergenic 40.0%
GTATTGGGATTTCTCCATCT+TGG + chr8.2:259911-259930 None:intergenic 40.0%
GTTCAGGACAAAATTCACAC+AGG - chr8.2:260775-260794 MS.gene95053:CDS 40.0%
TCTTGTTCATCAGATTCGGA+AGG + chr8.2:260671-260690 None:intergenic 40.0%
TGTGGAAGTTTCTGTGACAA+TGG + chr8.2:260373-260392 None:intergenic 40.0%
TTACTGTGATTGTGGTGTAG+TGG + chr8.2:260053-260072 None:intergenic 40.0%
TTCCACAGAAAAGAAGTCCA+AGG - chr8.2:260386-260405 MS.gene95053:CDS 40.0%
! AGTTGAATGGCATGATGATG+TGG + chr8.2:260640-260659 None:intergenic 40.0%
! CCATTAACTGAAGGGTTTTG+GGG + chr8.2:260134-260153 None:intergenic 40.0%
! GCCATTAACTGAAGGGTTTT+GGG + chr8.2:260135-260154 None:intergenic 40.0%
! TGATGACGATTTCTTGTAGG+AGG + chr8.2:260219-260238 None:intergenic 40.0%
! TGCCATTAACTGAAGGGTTT+TGG + chr8.2:260136-260155 None:intergenic 40.0%
! TGGTTGTGCCATTAACTGAA+GGG + chr8.2:260142-260161 None:intergenic 40.0%
!! AAAGAAGAGTGCTCAAGGTT+TGG - chr8.2:260900-260919 MS.gene95053:CDS 40.0%
!! TGTGAAAAGAAGAGTGCTCA+AGG - chr8.2:260895-260914 MS.gene95053:CDS 40.0%
AATACAGCATCAGCAGCAAC+AGG - chr8.2:260557-260576 MS.gene95053:CDS 45.0%
AATCGTCATCAGTTGTGGTG+AGG - chr8.2:260228-260247 MS.gene95053:CDS 45.0%
AATGGTTCCTTGTTCACCAC+TGG + chr8.2:260327-260346 None:intergenic 45.0%
AGAGCAGTTGAGTGCTTCAA+TGG + chr8.2:260345-260364 None:intergenic 45.0%
ATGGTTCCTTGTTCACCACT+GGG + chr8.2:260326-260345 None:intergenic 45.0%
CAACAGTTCTGCCAAGAGAT+TGG - chr8.2:260872-260891 MS.gene95053:CDS 45.0%
CATGTTACCTCTTCCTGATC+AGG - chr8.2:260496-260515 MS.gene95053:CDS 45.0%
CCCCAAAACCCTTCAGTTAA+TGG - chr8.2:260131-260150 MS.gene95053:CDS 45.0%
CTGTATTAGGAGTAGAGTGG+TGG + chr8.2:260544-260563 None:intergenic 45.0%
GAACTTTCCAACAGCCAAGA+TGG - chr8.2:259894-259913 MS.gene95053:CDS 45.0%
GAAGTTTCTGTGACAATGGC+AGG + chr8.2:260369-260388 None:intergenic 45.0%
GATTTCTCCATCTTGGCTGT+TGG + chr8.2:259904-259923 None:intergenic 45.0%
GTTGCTGCTGATGCTGTATT+AGG + chr8.2:260557-260576 None:intergenic 45.0%
TCAGAAGCAAGAGGAATCTG+TGG - chr8.2:260847-260866 MS.gene95053:CDS 45.0%
TGAAGTTGAAGGCTGAGTGA+TGG + chr8.2:260439-260458 None:intergenic 45.0%
TGAATTTCCTCATGCTGTGG+TGG + chr8.2:260478-260497 None:intergenic 45.0%
! CACCTTGGACTTCTTTTCTG+TGG + chr8.2:260391-260410 None:intergenic 45.0%
! GTGGTTGTGCCATTAACTGA+AGG + chr8.2:260143-260162 None:intergenic 45.0%
!! TATTATTATTATTATTATTG+TGG + chr8.2:259947-259966 None:intergenic 5.0%
AATCATGCAGCTGCAATGGG+AGG - chr8.2:260269-260288 MS.gene95053:CDS 50.0%
ACTACTACTGCCACTGGTAC+TGG + chr8.2:260110-260129 None:intergenic 50.0%
AGAAGTCCAAGGTGAGACTG+AGG - chr8.2:260397-260416 MS.gene95053:CDS 50.0%
AGTTGAAGGCTGAGTGATGG+TGG + chr8.2:260436-260455 None:intergenic 50.0%
ATCATGCAGCTGCAATGGGA+GGG - chr8.2:260270-260289 MS.gene95053:CDS 50.0%
ATGATGTGGCCATGTCCATG+AGG + chr8.2:260626-260645 None:intergenic 50.0%
CAAGCAGCAGCTGTTAGTAC+TGG - chr8.2:260170-260189 MS.gene95053:CDS 50.0%
CTGTGATTGTGGTGTAGTGG+AGG + chr8.2:260050-260069 None:intergenic 50.0%
GATGAACAAGAAGAGGCAGC+AGG - chr8.2:260680-260699 MS.gene95053:CDS 50.0%
TTCATGCCCAGTGGTGAACA+AGG - chr8.2:260317-260336 MS.gene95053:CDS 50.0%
! CTAACAGCTGCTGCTTGCAT+AGG + chr8.2:260167-260186 None:intergenic 50.0%
! TAGGAGTAGAGTGGTGGTGT+TGG + chr8.2:260538-260557 None:intergenic 50.0%
! TGATTGTGGTGTAGTGGAGG+AGG + chr8.2:260047-260066 None:intergenic 50.0%
!! AGCAGCTGTTAGTACTGGTG+TGG - chr8.2:260175-260194 MS.gene95053:CDS 50.0%
ATGGGAGGGAATGCCACAGA+TGG - chr8.2:260284-260303 MS.gene95053:CDS 55.0%
ATGTGGCCATGTCCATGAGG+TGG + chr8.2:260623-260642 None:intergenic 55.0%
CCAAGACCAAGAGCCTGATC+AGG + chr8.2:260512-260531 None:intergenic 55.0%
CCAAGAGCCTGATCAGGAAG+AGG + chr8.2:260506-260525 None:intergenic 55.0%
CCAAGGTGAGACTGAGGATC+AGG - chr8.2:260403-260422 MS.gene95053:CDS 55.0%
CCTCTTCCTGATCAGGCTCT+TGG - chr8.2:260503-260522 MS.gene95053:CDS 55.0%
CCTGATCAGGCTCTTGGTCT+TGG - chr8.2:260509-260528 MS.gene95053:CDS 55.0%
CCTGATCCTCAGTCTCACCT+TGG + chr8.2:260406-260425 None:intergenic 55.0%
GAACTCACCACAGCCATCTG+TGG + chr8.2:260300-260319 None:intergenic 55.0%
TGTGGTGAGTTCATGCCCAG+TGG - chr8.2:260308-260327 MS.gene95053:CDS 55.0%
! AGCTGCTGCTTGCATAGGAG+TGG + chr8.2:260162-260181 None:intergenic 55.0%
! GGTGTAGTGGAGGAGGATGA+GGG + chr8.2:260040-260059 None:intergenic 55.0%
! TGGGGTACTACTACTGCCAC+TGG + chr8.2:260116-260135 None:intergenic 55.0%
! TGGTGTAGTGGAGGAGGATG+AGG + chr8.2:260041-260060 None:intergenic 55.0%
!! CACTGGTACTGGCACTACTG+CGG + chr8.2:260099-260118 None:intergenic 55.0%
AGAGCTGTAGCGCCACCTCA+TGG - chr8.2:260608-260627 MS.gene95053:CDS 60.0%
CGCAGTAGTGCCAGTACCAG+TGG - chr8.2:260097-260116 MS.gene95053:CDS 60.0%
GGGAATGCCACAGATGGCTG+TGG - chr8.2:260290-260309 MS.gene95053:CDS 60.0%
GTAGCGCCACCTCATGGACA+TGG - chr8.2:260614-260633 MS.gene95053:CDS 60.0%
!! GGTGGCGCTACAGCTCTAGA+AGG + chr8.2:260605-260624 None:intergenic 60.0%
GGCAGCACCACCACAGCATG+AGG - chr8.2:260468-260487 MS.gene95053:CDS 65.0%
GCAGCAGCAGCAGCAGCAGC+AGG - chr8.2:260730-260749 MS.gene95053:CDS 70.0%
GCAGCAGCAGCAGCAGCAGG+AGG - chr8.2:260736-260755 MS.gene95053:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 259891 261015 259891 ID=MS.gene95053
chr8.2 mRNA 259891 261015 259891 ID=MS.gene95053.t1;Parent=MS.gene95053
chr8.2 exon 259891 261015 259891 ID=MS.gene95053.t1.exon1;Parent=MS.gene95053.t1
chr8.2 CDS 259891 261015 259891 ID=cds.MS.gene95053.t1;Parent=MS.gene95053.t1
Gene Sequence

>MS.gene95053

ATGGAACTTTCCAACAGCCAAGATGGAGAAATCCCAATACCAATCCCAATAAACCACAATAATAATAATAATAATAATAATAATAATTATGGTACTAGTAATGGACATGGTCATCACATGATTCACCATCATCATGTTCATGAACACCCTCATCCTCCTCCACTACACCACAATCACAGTAATATTATATCATCATCTTCTTCAGCCGCAGTAGTGCCAGTACCAGTGGCAGTAGTAGTACCCCAAAACCCTTCAGTTAATGGCACAACCACTCCTATGCAAGCAGCAGCTGTTAGTACTGGTGTGGAATTAGATCATGATCAGTCCTCCTACAAGAAATCGTCATCAGTTGTGGTGAGGTACAGAGAATGTCTAAAGAATCATGCAGCTGCAATGGGAGGGAATGCCACAGATGGCTGTGGTGAGTTCATGCCCAGTGGTGAACAAGGAACCATTGAAGCACTCAACTGCTCTGCCTGCCATTGTCACAGAAACTTCCACAGAAAAGAAGTCCAAGGTGAGACTGAGGATCAGGAAAACTACCACCATCACTCAGCCTTCAACTTCAACTTCAACAGGCAGCACCACCACAGCATGAGGAAATTCATGTTACCTCTTCCTGATCAGGCTCTTGGTCTTGGCTACCAACACCACCACTCTACTCCTAATACAGCATCAGCAGCAACAGGTAACAACAACAACAACATTCTTCCTTCTAGAGCTGTAGCGCCACCTCATGGACATGGCCACATCATCATGCCATTCAACTACAACATACCTTCCGAATCTGATGAACAAGAAGAGGCAGCAGGTAGACTACATATTCATCATCATCATCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGTAGTGATGAAGAAAAGGTTCAGGACAAAATTCACACAGGAACAGAAGGACAAAATGTTCAATTTTGCTGAGAAAGTTGGATGGAAATTTCAGAAGCAAGAGGAATCTGTGGTGCAACAGTTCTGCCAAGAGATTGGTGTGAAAAGAAGAGTGCTCAAGGTTTGGATGCATAACAATAAACACAATCTCGCCAAAAAACAACTTCAACATGAACATATTACTGCTAGTGCTAGTGCTAATCATCTCCCAACTCCATAA
Protein sequence

>MS.gene95053.t1

MELSNSQDGEIPIPIPINHNNNNNNNNNNYGTSNGHGHHMIHHHHVHEHPHPPPLHHNHSNIISSSSSAAVVPVPVAVVVPQNPSVNGTTTPMQAAAVSTGVELDHDQSSYKKSSSVVVRYRECLKNHAAAMGGNATDGCGEFMPSGEQGTIEALNCSACHCHRNFHRKEVQGETEDQENYHHHSAFNFNFNRQHHHSMRKFMLPLPDQALGLGYQHHHSTPNTASAATGNNNNNILPSRAVAPPHGHGHIIMPFNYNIPSESDEQEEAAGRLHIHHHHQQQQQQQQQEVVMKKRFRTKFTQEQKDKMFNFAEKVGWKFQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKQLQHEHITASASANHLPTP