Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95648.t1 | RHN46508.1 | 96.8 | 603 | 19 | 0 | 1 | 603 | 1 | 603 | 0.00E+00 | 1194.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95648.t1 | Q9FFT4 | 84.2 | 609 | 88 | 3 | 1 | 603 | 1 | 607 | 4.7e-308 | 1057.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95648.t1 | A0A396H177 | 96.8 | 603 | 19 | 0 | 1 | 603 | 1 | 603 | 0.0e+00 | 1194.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81954 | MS.gene95648 | PPI |
| MS.gene064505 | MS.gene95648 | PPI |
| MS.gene95648 | MS.gene017382 | PPI |
| MS.gene33522 | MS.gene95648 | PPI |
| MS.gene95648 | MS.gene02654 | PPI |
| MS.gene013678 | MS.gene95648 | PPI |
| MS.gene81957 | MS.gene95648 | PPI |
| MS.gene26127 | MS.gene95648 | PPI |
| MS.gene81956 | MS.gene95648 | PPI |
| MS.gene95648 | MS.gene02651 | PPI |
| MS.gene95648 | MS.gene013671 | PPI |
| MS.gene02655 | MS.gene95648 | PPI |
| MS.gene95648 | MS.gene02488 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95648.t1 | MTR_7g069540 | 92.231 | 605 | 45 | 2 | 1 | 603 | 1 | 605 | 0.0 | 1138 |
| MS.gene95648.t1 | MTR_7g069500 | 91.045 | 603 | 26 | 2 | 1 | 603 | 1 | 575 | 0.0 | 1105 |
| MS.gene95648.t1 | MTR_4g017200 | 85.667 | 607 | 83 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1071 |
| MS.gene95648.t1 | MTR_5g046610 | 85.338 | 607 | 85 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1068 |
| MS.gene95648.t1 | MTR_2g015560 | 82.155 | 566 | 101 | 0 | 38 | 603 | 17 | 582 | 0.0 | 988 |
| MS.gene95648.t1 | MTR_2g009330 | 70.435 | 575 | 169 | 1 | 27 | 600 | 35 | 609 | 0.0 | 878 |
| MS.gene95648.t1 | MTR_5g046620 | 50.622 | 241 | 42 | 5 | 233 | 472 | 1 | 165 | 1.04e-64 | 209 |
| MS.gene95648.t1 | MTR_3g099190 | 23.875 | 511 | 339 | 18 | 47 | 531 | 84 | 570 | 3.97e-17 | 85.5 |
| MS.gene95648.t1 | MTR_1g011530 | 46.667 | 75 | 37 | 1 | 349 | 423 | 31 | 102 | 3.01e-16 | 75.1 |
| MS.gene95648.t1 | MTR_2g013120 | 22.243 | 544 | 358 | 17 | 27 | 531 | 57 | 574 | 2.98e-15 | 79.7 |
| MS.gene95648.t1 | MTR_2g027220 | 22.842 | 556 | 353 | 18 | 47 | 558 | 67 | 590 | 7.17e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95648.t1 | AT4G33070 | 85.008 | 607 | 87 | 1 | 1 | 603 | 1 | 607 | 0.0 | 1073 |
| MS.gene95648.t1 | AT5G54960 | 84.236 | 609 | 88 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1073 |
| MS.gene95648.t1 | AT5G01320 | 83.775 | 604 | 96 | 2 | 1 | 603 | 1 | 603 | 0.0 | 1058 |
| MS.gene95648.t1 | AT5G01330 | 82.383 | 596 | 101 | 1 | 8 | 603 | 1 | 592 | 0.0 | 1026 |
| MS.gene95648.t1 | AT5G17380 | 24.551 | 501 | 308 | 18 | 47 | 509 | 18 | 486 | 7.94e-18 | 87.4 |
| MS.gene95648.t1 | AT3G48560 | 22.807 | 513 | 342 | 15 | 47 | 531 | 103 | 589 | 1.50e-13 | 74.3 |
Find 156 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTGATGGAAGCTTTC+AGG | 0.099113 | 7.4:-34252819 | MS.gene95648:intron |
| CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7.4:-34253460 | MS.gene95648:CDS |
| CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7.4:-34253459 | MS.gene95648:CDS |
| TACTTGGGAGCGAGTGAAAA+AGG | 0.254142 | 7.4:+34254051 | None:intergenic |
| GGACCCAATTCTAACGATTA+TGG | 0.256185 | 7.4:-34255442 | MS.gene95648:CDS |
| TCTGAAGTTTACTGAGGATT+TGG | 0.261297 | 7.4:+34252268 | None:intergenic |
| CTAACGATTATGGGACTAAT+AGG | 0.263273 | 7.4:-34255432 | MS.gene95648:CDS |
| AAACATAAGCTATCTTTCTT+TGG | 0.266263 | 7.4:+34252376 | None:intergenic |
| TGTATCCTCCGTTGTTTATC+AGG | 0.267154 | 7.4:+34252645 | None:intergenic |
| CTGAAGTTTACTGAGGATTT+GGG | 0.267884 | 7.4:+34252269 | None:intergenic |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.273563 | 7.4:+34253143 | None:intergenic |
| CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7.4:+34253459 | None:intergenic |
| AGGATTCTTCATCATACTAT+TGG | 0.323169 | 7.4:-34255412 | MS.gene95648:CDS |
| TTGCCGCTTGTTTGTATTGT+TGG | 0.331969 | 7.4:-34255466 | MS.gene95648:CDS |
| ATCAAGAACTGGAATTATAC+TGG | 0.339227 | 7.4:-34252584 | MS.gene95648:CDS |
| CAAATGCAATATGGTTCAAT+TGG | 0.346194 | 7.4:-34252905 | MS.gene95648:CDS |
| CACCGACGTCTTCTCCGTTC+CGG | 0.351076 | 7.4:-34255686 | MS.gene95648:CDS |
| GTTGCCAATGGACCTGCATT+TGG | 0.356909 | 7.4:-34253284 | MS.gene95648:CDS |
| AACAAAATGTCCACAATGTT+AGG | 0.362479 | 7.4:-34255859 | None:intergenic |
| CAAGCAATCACTCGCTTCTC+GGG | 0.364950 | 7.4:+34252842 | None:intergenic |
| AGTCCCATAATCGTTAGAAT+TGG | 0.366490 | 7.4:+34255438 | None:intergenic |
| ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7.4:+34253473 | None:intergenic |
| CATGAAACGACGTCGTTGTT+TGG | 0.370477 | 7.4:+34255814 | None:intergenic |
| CAGCCAATGCTTATATAAAC+AGG | 0.374707 | 7.4:+34254120 | None:intergenic |
| GCTGATGCATACTTGTTTGC+CGG | 0.375814 | 7.4:-34253395 | MS.gene95648:CDS |
| TATGAGTTTCAAATGCAATA+TGG | 0.377744 | 7.4:-34252914 | MS.gene95648:CDS |
| GACGCTTCGCAAGTGCCTTT+AGG | 0.385948 | 7.4:+34253240 | None:intergenic |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.4:+34252596 | None:intergenic |
| CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7.4:+34253460 | None:intergenic |
| GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7.4:-34253470 | MS.gene95648:CDS |
| GCAAGCAATCACTCGCTTCT+CGG | 0.396937 | 7.4:+34252841 | None:intergenic |
| GAAGCAATTGCCACAGCAAC+AGG | 0.397655 | 7.4:-34252400 | MS.gene95648:CDS |
| ACCGACGTCTTCTCCGTTCC+GGG | 0.411535 | 7.4:-34255685 | MS.gene95648:CDS |
| GACCCAATTCTAACGATTAT+GGG | 0.421284 | 7.4:-34255441 | MS.gene95648:CDS |
| TTTAATGACTACAGCTCTGT+TGG | 0.425890 | 7.4:-34253365 | MS.gene95648:CDS |
| GTCCCATAATCGTTAGAATT+GGG | 0.439562 | 7.4:+34255439 | None:intergenic |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.4:-34252595 | MS.gene95648:CDS |
| CTCAACTCCTGACTAAAATC+AGG | 0.453988 | 7.4:+34255385 | None:intergenic |
| GTTGTTTATCAGGAAGATGA+TGG | 0.461963 | 7.4:+34252655 | None:intergenic |
| TTGGCAACCACAACCCGATC+GGG | 0.464377 | 7.4:+34253299 | None:intergenic |
| GATCGGGTTGTGGTTGCCAA+TGG | 0.465045 | 7.4:-34253296 | MS.gene95648:CDS |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.4:-34252353 | MS.gene95648:CDS |
| CAATCATTGTGCAGCCCGAT+CGG | 0.474852 | 7.4:-34253313 | MS.gene95648:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7.4:-34252881 | MS.gene95648:CDS |
| CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7.4:-34253502 | MS.gene95648:CDS |
| CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7.4:-34253458 | MS.gene95648:CDS |
| TTTGATGAAGGATTTCCTAA+AGG | 0.484406 | 7.4:-34253255 | MS.gene95648:CDS |
| CCGCTTGTTTGTATTGTTGG+TGG | 0.484728 | 7.4:-34255463 | MS.gene95648:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.486372 | 7.4:-34253032 | MS.gene95648:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 7.4:-34252901 | MS.gene95648:CDS |
| TTGGGACCACCTACTAGTAC+AGG | 0.490734 | 7.4:+34253590 | None:intergenic |
| TTAATGACTACAGCTCTGTT+GGG | 0.491232 | 7.4:-34253364 | MS.gene95648:CDS |
| ACAACATCTGTTGTATATGT+TGG | 0.492054 | 7.4:+34253111 | None:intergenic |
| GACAGGATCACGACTGAAAG+TGG | 0.492188 | 7.4:+34254074 | None:intergenic |
| CGACCATCTCGTCAATGAAC+CGG | 0.492546 | 7.4:-34255641 | MS.gene95648:CDS |
| AATCATTGTGCAGCCCGATC+GGG | 0.492725 | 7.4:-34253312 | MS.gene95648:CDS |
| TGGTTACTTTCACTGTTGGT+GGG | 0.493226 | 7.4:-34255531 | MS.gene95648:CDS |
| AGTGTTCTTAATGCTATAGC+TGG | 0.494975 | 7.4:-34255505 | MS.gene95648:CDS |
| GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7.4:-34253503 | MS.gene95648:CDS |
| ACAGCTGTGATTGCTGAGAC+AGG | 0.499666 | 7.4:-34253080 | MS.gene95648:CDS |
| TGTGTGGTTACTTTCACTGT+TGG | 0.505043 | 7.4:-34255535 | MS.gene95648:CDS |
| AGCTGTGATTGCTGAGACAG+GGG | 0.505266 | 7.4:-34253078 | MS.gene95648:CDS |
| GCAGTAAAACCTGTACTAGT+AGG | 0.506078 | 7.4:-34253599 | MS.gene95648:CDS |
| GTGGTTACTTTCACTGTTGG+TGG | 0.506819 | 7.4:-34255532 | MS.gene95648:CDS |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.4:-34252620 | MS.gene95648:CDS |
| AGCATTGGCTGTAACTTGCC+TGG | 0.508186 | 7.4:-34254108 | MS.gene95648:CDS |
| ACATCCAAATGCAGGTCCAT+TGG | 0.510520 | 7.4:+34253280 | None:intergenic |
| CATAGGATATTTGTCCCAGA+TGG | 0.511574 | 7.4:-34253185 | MS.gene95648:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.511832 | 7.4:-34255601 | MS.gene95648:CDS |
| GCTATTGGCAGCAGAAACTC+TGG | 0.513104 | 7.4:+34252297 | None:intergenic |
| TGTGCAGCCCGATCGGGTTG+TGG | 0.514001 | 7.4:-34253306 | MS.gene95648:CDS |
| CGAGATGGTCGAGGAGGGTG+AGG | 0.514495 | 7.4:+34255653 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 7.4:-34252893 | MS.gene95648:CDS |
| AAGCCTGTTTATATAAGCAT+TGG | 0.517974 | 7.4:-34254123 | MS.gene95648:CDS |
| ATCAAAATACATCCAAATGC+AGG | 0.522110 | 7.4:+34253272 | None:intergenic |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.4:+34253134 | None:intergenic |
| TTGCTGAGACAGGGGACTCA+TGG | 0.524993 | 7.4:-34253070 | MS.gene95648:CDS |
| TTATTGGGGTGCTGTGAGTA+CGG | 0.525149 | 7.4:-34253444 | MS.gene95648:CDS |
| AGACGATCGCGGTGGATGGT+TGG | 0.525284 | 7.4:+34255764 | None:intergenic |
| CAGGAGACGATCGCGGTGGA+TGG | 0.529466 | 7.4:+34255760 | None:intergenic |
| AACACTTACCCACATCCCTC+AGG | 0.537513 | 7.4:+34253023 | None:intergenic |
| TTTCTTTGGTCCTGTTGCTG+TGG | 0.540855 | 7.4:+34252390 | None:intergenic |
| CATCTGGGACAAATATCCTA+TGG | 0.541696 | 7.4:+34253186 | None:intergenic |
| TATGCTCGGTCACGTGGTGT+CGG | 0.546337 | 7.4:-34255562 | MS.gene95648:CDS |
| GCGGCCGAGTGTAGCGTCGC+AGG | 0.547575 | 7.4:+34255741 | None:intergenic |
| AAGCAAAGAGCTGCTTGAGT+GGG | 0.547778 | 7.4:-34252323 | MS.gene95648:CDS |
| CAAGCAAAGAGCTGCTTGAG+TGG | 0.547979 | 7.4:-34252324 | MS.gene95648:CDS |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7.4:-34252830 | MS.gene95648:CDS |
| ATAGGCTGTGGTGAATAACT+TGG | 0.556113 | 7.4:-34254199 | MS.gene95648:intron |
| ATTGGCAACCACAACCCGAT+CGG | 0.558278 | 7.4:+34253298 | None:intergenic |
| GAACTAGTCGGCGTGCGAGA+TGG | 0.559516 | 7.4:+34255719 | None:intergenic |
| CTAGTCGGCGTGCGAGATGG+CGG | 0.559637 | 7.4:+34255722 | None:intergenic |
| ACTTCTTCTCAAGAAAGAGA+AGG | 0.560019 | 7.4:-34253336 | MS.gene95648:CDS |
| TGCTTTACAGGTAACTGCAC+AGG | 0.560389 | 7.4:-34252711 | MS.gene95648:intron |
| TGAAGTTTACTGAGGATTTG+GGG | 0.560721 | 7.4:+34252270 | None:intergenic |
| GTCTCCTGCGACGCTACACT+CGG | 0.564281 | 7.4:-34255745 | MS.gene95648:CDS |
| AGGGTGAGGTTGAAGTCGCC+CGG | 0.566628 | 7.4:+34255667 | None:intergenic |
| TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7.4:+34253474 | None:intergenic |
| GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7.4:+34253494 | None:intergenic |
| ATTGAGTAACCACATGGGGT+TGG | 0.573467 | 7.4:-34253660 | MS.gene95648:CDS |
| CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7.4:+34253502 | None:intergenic |
| CTGCTTATGAAAATTACCAT+AGG | 0.576792 | 7.4:-34253202 | MS.gene95648:CDS |
| GCTCCGGTTCATTGACGAGA+TGG | 0.581139 | 7.4:+34255638 | None:intergenic |
| GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7.4:-34252554 | MS.gene95648:CDS |
| GACGGTTATGCTCGGTCACG+TGG | 0.584252 | 7.4:-34255568 | MS.gene95648:CDS |
| CAGCTGTGATTGCTGAGACA+GGG | 0.585307 | 7.4:-34253079 | MS.gene95648:CDS |
| GTCGAACTAGCTGATGCAAG+TGG | 0.587023 | 7.4:-34253536 | MS.gene95648:CDS |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7.4:-34252836 | MS.gene95648:CDS |
| TCACGACTGAAAGTGGGATG+AGG | 0.587384 | 7.4:+34254081 | None:intergenic |
| ATGCGGCTGACGGTTATGCT+CGG | 0.592533 | 7.4:-34255576 | MS.gene95648:CDS |
| AAAGTGGGATGAGGAATACC+AGG | 0.593405 | 7.4:+34254090 | None:intergenic |
| CAACCGATGAGGTTCAGCTC+CGG | 0.593930 | 7.4:+34255622 | None:intergenic |
| GAACCGGAGCTGAACCTCAT+CGG | 0.594651 | 7.4:-34255625 | MS.gene95648:CDS |
| GAGGTTGAAGTCGCCCGGAA+CGG | 0.598203 | 7.4:+34255672 | None:intergenic |
| ATCTAAAGATCCTAACATTG+TGG | 0.599636 | 7.4:+34255849 | None:intergenic |
| CGAGCTGAATGCTGGTTATG+CGG | 0.602693 | 7.4:-34255593 | MS.gene95648:CDS |
| ATCGCGGTGGATGGTTGGAT+CGG | 0.603317 | 7.4:+34255769 | None:intergenic |
| TTGTAGATTGAGTAACCACA+TGG | 0.603932 | 7.4:-34253666 | MS.gene95648:intron |
| ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7.4:-34252544 | MS.gene95648:CDS |
| GTTCATTGACGAGATGGTCG+AGG | 0.607447 | 7.4:+34255644 | None:intergenic |
| AGTAGGTGGTCCCAAACTGA+GGG | 0.612881 | 7.4:-34253582 | MS.gene95648:CDS |
| AATGCTGGTTATGCGGCTGA+CGG | 0.614053 | 7.4:-34255586 | MS.gene95648:CDS |
| GAAGTTTACTGAGGATTTGG+GGG | 0.615619 | 7.4:+34252271 | None:intergenic |
| AGCAAAGAGCTGCTTGAGTG+GGG | 0.619453 | 7.4:-34252322 | MS.gene95648:CDS |
| AAGTTCCAATGAAATGGGGA+TGG | 0.619469 | 7.4:+34253465 | None:intergenic |
| AGGAAAATGTTGGACAACCA+AGG | 0.622216 | 7.4:-34252534 | MS.gene95648:intron |
| ACGTGGTGTCGGTGCTTGTG+TGG | 0.624381 | 7.4:-34255551 | MS.gene95648:CDS |
| TAGTAGGTGGTCCCAAACTG+AGG | 0.624646 | 7.4:-34253583 | MS.gene95648:CDS |
| CAACGGAGGATACACAATTG+AGG | 0.625719 | 7.4:-34252636 | MS.gene95648:CDS |
| AGGTGGTCCCAAACTGAGGG+TGG | 0.630619 | 7.4:-34253579 | MS.gene95648:CDS |
| ATTGACGAGATGGTCGAGGA+GGG | 0.639532 | 7.4:+34255648 | None:intergenic |
| TGAAATTGCCTGAGGGATGT+GGG | 0.642606 | 7.4:-34253031 | MS.gene95648:intron |
| CTGCTGCTTCCAACCCCATG+TGG | 0.646622 | 7.4:+34253651 | None:intergenic |
| CATTGACGAGATGGTCGAGG+AGG | 0.646882 | 7.4:+34255647 | None:intergenic |
| TGCATCAGCTAGTTCGACAA+AGG | 0.650364 | 7.4:+34253541 | None:intergenic |
| GCACGCCGACTAGTTCAAGT+CGG | 0.651568 | 7.4:-34255712 | MS.gene95648:CDS |
| ACAGGATCACGACTGAAAGT+GGG | 0.654306 | 7.4:+34254075 | None:intergenic |
| AAGCAATCACTCGCTTCTCG+GGG | 0.655548 | 7.4:+34252843 | None:intergenic |
| CCACCAACAATACAAACAAG+CGG | 0.658046 | 7.4:+34255463 | None:intergenic |
| GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7.4:-34253498 | MS.gene95648:CDS |
| CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7.4:+34253461 | None:intergenic |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.663030 | 7.4:-34253645 | MS.gene95648:CDS |
| TGACGCCGACTTGAACTAGT+CGG | 0.664570 | 7.4:+34255707 | None:intergenic |
| ATCATCTTCCTGATAAACAA+CGG | 0.665526 | 7.4:-34252653 | MS.gene95648:CDS |
| GTAGATTGAGTAACCACATG+GGG | 0.665962 | 7.4:-34253664 | MS.gene95648:intron |
| GTAAAACCTGTACTAGTAGG+TGG | 0.676238 | 7.4:-34253596 | MS.gene95648:CDS |
| ACTGACTCTGAAGTTTACTG+AGG | 0.676440 | 7.4:+34252262 | None:intergenic |
| TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7.4:-34252560 | MS.gene95648:CDS |
| TGTAGATTGAGTAACCACAT+GGG | 0.679957 | 7.4:-34253665 | MS.gene95648:intron |
| GCTCGTTACAGCAACCGATG+AGG | 0.687230 | 7.4:+34255611 | None:intergenic |
| AGGATGTATCGACAATGCTG+AGG | 0.697986 | 7.4:-34252691 | MS.gene95648:CDS |
| GCCCGGAACGGAGAAGACGT+CGG | 0.705259 | 7.4:+34255684 | None:intergenic |
| ATCTTCCTGATAAACAACGG+AGG | 0.706663 | 7.4:-34252650 | MS.gene95648:CDS |
| AGCGTCGCAGGAGACGATCG+CGG | 0.709422 | 7.4:+34255753 | None:intergenic |
| GTATCGACAATGCTGAGGTG+TGG | 0.717609 | 7.4:-34252686 | MS.gene95648:CDS |
| GTCGCAGGAGACGATCGCGG+TGG | 0.741266 | 7.4:+34255756 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTACATATTTGAATT+GGG | - | chr7.4:34253481-34253500 | MS.gene95648:CDS | 10.0% |
| !! | CATAAATTACATATTTGAAT+TGG | - | chr7.4:34253480-34253499 | MS.gene95648:CDS | 15.0% |
| !! | TAAAATCATGGTAATTTAAT+CGG | - | chr7.4:34253803-34253822 | MS.gene95648:intron | 15.0% |
| !! | TAAATTACATATTTGAATTG+GGG | - | chr7.4:34253482-34253501 | MS.gene95648:CDS | 15.0% |
| !! | TCAAATATGTAATTTATGTT+TGG | + | chr7.4:34253478-34253497 | None:intergenic | 15.0% |
| !! | AAAATCATGGTAATTTAATC+GGG | - | chr7.4:34253804-34253823 | MS.gene95648:intron | 20.0% |
| !! | TATAAAACATTTCATAGTGT+CGG | + | chr7.4:34253593-34253612 | None:intergenic | 20.0% |
| !!! | CACTTTTCGTTTTTAAATTA+CGG | + | chr7.4:34253699-34253718 | None:intergenic | 20.0% |
| !!! | GATTAAATTACCATGATTTT+AGG | + | chr7.4:34253804-34253823 | None:intergenic | 20.0% |
| !!! | GCTAAATTTACTACAATTTT+AGG | + | chr7.4:34253207-34253226 | None:intergenic | 20.0% |
| !!! | TTGCTAAATTTGTCATTTTT+TGG | - | chr7.4:34252804-34252823 | MS.gene95648:intron | 20.0% |
| ! | AAACATAAGCTATCTTTCTT+TGG | + | chr7.4:34255756-34255775 | None:intergenic | 25.0% |
| ! | AAAGTTTGTCAGAATTATAG+TGG | - | chr7.4:34253343-34253362 | MS.gene95648:CDS | 25.0% |
| ! | AAATAGAGAAAGACTTACTT+GGG | + | chr7.4:34254096-34254115 | None:intergenic | 25.0% |
| ! | AACATAACATTAACTCTCAA+AGG | + | chr7.4:34254998-34255017 | None:intergenic | 25.0% |
| ! | AGAGCTTAAAAAAATCACTT+GGG | + | chr7.4:34253767-34253786 | None:intergenic | 25.0% |
| ! | ATACACTACATGTTTGAATT+GGG | - | chr7.4:34253131-34253150 | MS.gene95648:CDS | 25.0% |
| ! | TAGAGCTTAAAAAAATCACT+TGG | + | chr7.4:34253768-34253787 | None:intergenic | 25.0% |
| ! | TATGAGTTTCAAATGCAATA+TGG | - | chr7.4:34255215-34255234 | MS.gene95648:intron | 25.0% |
| ! | TCATCAACATTTCCAATAAT+CGG | + | chr7.4:34254416-34254435 | None:intergenic | 25.0% |
| ! | TTCAAATCATCCAAAAAATC+TGG | - | chr7.4:34254163-34254182 | MS.gene95648:CDS | 25.0% |
| !! | GTACTGATAAAAATCTTGTT+TGG | - | chr7.4:34255189-34255208 | MS.gene95648:intron | 25.0% |
| !! | TAACTTTTACAAAATCACAG+TGG | + | chr7.4:34253394-34253413 | None:intergenic | 25.0% |
| !!! | AACATAAAAGCCAGATTTTT+TGG | + | chr7.4:34254176-34254195 | None:intergenic | 25.0% |
| !!! | AGGCTAGTTTTTGTTAAAAT+CGG | - | chr7.4:34254314-34254333 | MS.gene95648:intron | 25.0% |
| !!! | ATTTGGATGTATTTTGATGA+AGG | - | chr7.4:34254862-34254881 | MS.gene95648:intron | 25.0% |
| !!! | TTGTGGTTTGATTTGATTAT+AGG | - | chr7.4:34253912-34253931 | MS.gene95648:intron | 25.0% |
| AAGCCTGTTTATATAAGCAT+TGG | - | chr7.4:34254006-34254025 | MS.gene95648:intron | 30.0% | |
| AAGTTTGGTAGAATCACATT+GGG | + | chr7.4:34254345-34254364 | None:intergenic | 30.0% | |
| ACAACATCTGTTGTATATGT+TGG | + | chr7.4:34255021-34255040 | None:intergenic | 30.0% | |
| AGAGCTGTAGTCATTAAAAA+TGG | + | chr7.4:34254762-34254781 | None:intergenic | 30.0% | |
| AGGATTCTTCATCATACTAT+TGG | - | chr7.4:34252717-34252736 | MS.gene95648:intron | 30.0% | |
| ATCAAAATACATCCAAATGC+AGG | + | chr7.4:34254860-34254879 | None:intergenic | 30.0% | |
| ATCAAGAACTGGAATTATAC+TGG | - | chr7.4:34255545-34255564 | MS.gene95648:CDS | 30.0% | |
| ATCATCTTCCTGATAAACAA+CGG | - | chr7.4:34255476-34255495 | MS.gene95648:CDS | 30.0% | |
| ATCTAAAGATCCTAACATTG+TGG | + | chr7.4:34252283-34252302 | None:intergenic | 30.0% | |
| ATTGAGGTTGAAATTCATGA+TGG | - | chr7.4:34255509-34255528 | MS.gene95648:CDS | 30.0% | |
| CAAAAATTGAAATTGCCTGA+GGG | - | chr7.4:34255091-34255110 | MS.gene95648:intron | 30.0% | |
| CAAAATCATGGTAAGAACTA+TGG | - | chr7.4:34253430-34253449 | MS.gene95648:CDS | 30.0% | |
| CAAATAGAGAAAGACTTACT+TGG | + | chr7.4:34254097-34254116 | None:intergenic | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr7.4:34255224-34255243 | MS.gene95648:intron | 30.0% | |
| CAATAAGTTCCAATGAAATG+GGG | + | chr7.4:34254671-34254690 | None:intergenic | 30.0% | |
| CAATGAGTTTGACAAAATCA+CGG | + | chr7.4:34253100-34253119 | None:intergenic | 30.0% | |
| CAGCACTTATATTCTTGTTA+TGG | + | chr7.4:34255662-34255681 | None:intergenic | 30.0% | |
| CATACAATGTTATCAAGAAC+TGG | - | chr7.4:34255534-34255553 | MS.gene95648:CDS | 30.0% | |
| CATACACTACATGTTTGAAT+TGG | - | chr7.4:34253130-34253149 | MS.gene95648:CDS | 30.0% | |
| CATTTCATTGGAACTTATTG+GGG | - | chr7.4:34254671-34254690 | MS.gene95648:intron | 30.0% | |
| CCAATAAGTTCCAATGAAAT+GGG | + | chr7.4:34254672-34254691 | None:intergenic | 30.0% | |
| CCATTTCATTGGAACTTATT+GGG | - | chr7.4:34254670-34254689 | MS.gene95648:intron | 30.0% | |
| CTGCTTATGAAAATTACCAT+AGG | - | chr7.4:34254927-34254946 | MS.gene95648:intron | 30.0% | |
| GAGCTGTAGTCATTAAAAAT+GGG | + | chr7.4:34254761-34254780 | None:intergenic | 30.0% | |
| GAGCTTAAAAAAATCACTTG+GGG | + | chr7.4:34253766-34253785 | None:intergenic | 30.0% | |
| GCACTTAGTTGTTGTAAAAT+GGG | - | chr7.4:34253871-34253890 | MS.gene95648:intron | 30.0% | |
| GTTTATTGTGTTTGTGAAGT+TGG | - | chr7.4:34252860-34252879 | MS.gene95648:CDS | 30.0% | |
| TAAGTTAACAAGTGCATTTC+TGG | + | chr7.4:34254376-34254395 | None:intergenic | 30.0% | |
| TAAGTTTGGTAGAATCACAT+TGG | + | chr7.4:34254346-34254365 | None:intergenic | 30.0% | |
| TACACTACATGTTTGAATTG+GGG | - | chr7.4:34253132-34253151 | MS.gene95648:CDS | 30.0% | |
| TACACTTGGCTATTGTAAAA+CGG | - | chr7.4:34253257-34253276 | MS.gene95648:CDS | 30.0% | |
| TCAAAAATTGAAATTGCCTG+AGG | - | chr7.4:34255090-34255109 | MS.gene95648:intron | 30.0% | |
| TCAAACATGTAGTGTATGTT+TGG | + | chr7.4:34253128-34253147 | None:intergenic | 30.0% | |
| TGCACTTAGTTGTTGTAAAA+TGG | - | chr7.4:34253870-34253889 | MS.gene95648:intron | 30.0% | |
| TTAACTTATGTGTGTAGAAG+AGG | - | chr7.4:34254388-34254407 | MS.gene95648:intron | 30.0% | |
| TTGATTGATGCAATTCACAA+TGG | - | chr7.4:34255569-34255588 | MS.gene95648:CDS | 30.0% | |
| TTTGATGAAGGATTTCCTAA+AGG | - | chr7.4:34254874-34254893 | MS.gene95648:intron | 30.0% | |
| ! | CAGTTCTTGATAACATTGTA+TGG | + | chr7.4:34255536-34255555 | None:intergenic | 30.0% |
| ! | CTGATAAAAATCTTGTTTGG+AGG | - | chr7.4:34255192-34255211 | MS.gene95648:intron | 30.0% |
| ! | CTTGTTATGGAAGAAATTTG+AGG | + | chr7.4:34255649-34255668 | None:intergenic | 30.0% |
| ! | TTAACTCTCAAAGGTTCTTT+TGG | + | chr7.4:34254989-34255008 | None:intergenic | 30.0% |
| !! | AGTTGTTGTAAAATGGGTTT+TGG | - | chr7.4:34253877-34253896 | MS.gene95648:intron | 30.0% |
| !! | TTTGATTTGATTATAGGCTG+TGG | - | chr7.4:34253918-34253937 | MS.gene95648:intron | 30.0% |
| !!! | ATGTTGCTTTTGCAAAATCA+TGG | - | chr7.4:34253068-34253087 | MS.gene95648:CDS | 30.0% |
| !!! | GCTAGTTTTTGTTAAAATCG+GGG | - | chr7.4:34254316-34254335 | MS.gene95648:intron | 30.0% |
| !!! | GGCTAGTTTTTGTTAAAATC+GGG | - | chr7.4:34254315-34254334 | MS.gene95648:intron | 30.0% |
| !!! | TTTGGTGATTGTTTTGATTG+TGG | - | chr7.4:34253895-34253914 | MS.gene95648:intron | 30.0% |
| AACAAAAGTCGCTATGTATC+TGG | + | chr7.4:34253312-34253331 | None:intergenic | 35.0% | |
| AATTACTTGAAAGTGGGATG+AGG | + | chr7.4:34254122-34254141 | None:intergenic | 35.0% | |
| ACAATGGTGAAGGAAAATGT+TGG | - | chr7.4:34255585-34255604 | MS.gene95648:CDS | 35.0% | |
| ACACGCTAATTACTTGAAAG+TGG | + | chr7.4:34254129-34254148 | None:intergenic | 35.0% | |
| ACACTTGGCTATTGTAAAAC+GGG | - | chr7.4:34253258-34253277 | MS.gene95648:CDS | 35.0% | |
| ACTTCTTCTCAAGAAAGAGA+AGG | - | chr7.4:34254793-34254812 | MS.gene95648:intron | 35.0% | |
| AGTCCCATAATCGTTAGAAT+TGG | + | chr7.4:34252694-34252713 | None:intergenic | 35.0% | |
| AGTGAGTTTGTCATGTGATT+TGG | - | chr7.4:34253032-34253051 | MS.gene95648:CDS | 35.0% | |
| AGTGTGTAGTGTGTACATTA+CGG | - | chr7.4:34252889-34252908 | MS.gene95648:CDS | 35.0% | |
| AGTGTTCTTAATGCTATAGC+TGG | - | chr7.4:34252624-34252643 | MS.gene95648:CDS | 35.0% | |
| ATGTTGCTCTTGCAAAATCA+TGG | - | chr7.4:34253418-34253437 | MS.gene95648:CDS | 35.0% | |
| CACGCTAATTACTTGAAAGT+GGG | + | chr7.4:34254128-34254147 | None:intergenic | 35.0% | |
| CAGCCAATGCTTATATAAAC+AGG | + | chr7.4:34254012-34254031 | None:intergenic | 35.0% | |
| CATTGAAGTGATTGTTCACA+AGG | - | chr7.4:34255776-34255795 | MS.gene95648:CDS | 35.0% | |
| CCCAATAAGTTCCAATGAAA+TGG | + | chr7.4:34254673-34254692 | None:intergenic | 35.0% | |
| CCCATTTCATTGGAACTTAT+TGG | - | chr7.4:34254669-34254688 | MS.gene95648:intron | 35.0% | |
| CTAACGATTATGGGACTAAT+AGG | - | chr7.4:34252697-34252716 | MS.gene95648:CDS | 35.0% | |
| CTTTCTCCTAAATGCTTTAC+AGG | - | chr7.4:34255406-34255425 | MS.gene95648:CDS | 35.0% | |
| GACCCAATTCTAACGATTAT+GGG | - | chr7.4:34252688-34252707 | MS.gene95648:CDS | 35.0% | |
| GGTGAGTTTGAAGAACTTAA+GGG | - | chr7.4:34253503-34253522 | MS.gene95648:CDS | 35.0% | |
| GTAGTCATTAAAAATGGGAC+CGG | + | chr7.4:34254756-34254775 | None:intergenic | 35.0% | |
| GTCCCATAATCGTTAGAATT+GGG | + | chr7.4:34252693-34252712 | None:intergenic | 35.0% | |
| GTTGTTTATCAGGAAGATGA+TGG | + | chr7.4:34255477-34255496 | None:intergenic | 35.0% | |
| GTTTGAATTAGCAGCAAGTT+TGG | - | chr7.4:34254252-34254271 | MS.gene95648:intron | 35.0% | |
| TAATTTAATCGGGCACATTG+TGG | - | chr7.4:34253814-34253833 | MS.gene95648:intron | 35.0% | |
| TGAGATTGTTGAAGCTTCAA+AGG | - | chr7.4:34254294-34254313 | MS.gene95648:intron | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr7.4:34255228-34255247 | MS.gene95648:intron | 35.0% | |
| TGTACGTTGTCCTAAAATCA+TGG | - | chr7.4:34253791-34253810 | MS.gene95648:intron | 35.0% | |
| TGTAGATTGAGTAACCACAT+GGG | - | chr7.4:34254464-34254483 | MS.gene95648:intron | 35.0% | |
| TGTGATTCTACCAAACTTAC+TGG | - | chr7.4:34254347-34254366 | MS.gene95648:intron | 35.0% | |
| TTAATGACTACAGCTCTGTT+GGG | - | chr7.4:34254765-34254784 | MS.gene95648:intron | 35.0% | |
| TTAGCGTGTCTTCGATATTA+CGG | - | chr7.4:34254140-34254159 | MS.gene95648:CDS | 35.0% | |
| TTGTAGATTGAGTAACCACA+TGG | - | chr7.4:34254463-34254482 | MS.gene95648:intron | 35.0% | |
| TTTAATGACTACAGCTCTGT+TGG | - | chr7.4:34254764-34254783 | MS.gene95648:intron | 35.0% | |
| TTTCTGGATTCCAGTAAGTT+TGG | + | chr7.4:34254360-34254379 | None:intergenic | 35.0% | |
| ! | ACTTCAAAGGTTTTCCATCT+GGG | + | chr7.4:34254961-34254980 | None:intergenic | 35.0% |
| ! | AGTTTTTGTTAAAATCGGGG+TGG | - | chr7.4:34254319-34254338 | MS.gene95648:intron | 35.0% |
| ! | CAGTTACCTGTAAAGCATTT+AGG | + | chr7.4:34255415-34255434 | None:intergenic | 35.0% |
| ! | CATCGTGTTTAAAGCAAGTT+TGG | + | chr7.4:34254216-34254235 | None:intergenic | 35.0% |
| ! | CTGTAAAGCATTTAGGAGAA+AGG | + | chr7.4:34255408-34255427 | None:intergenic | 35.0% |
| ! | GATACATAGCGACTTTTGTT+TGG | - | chr7.4:34253312-34253331 | MS.gene95648:CDS | 35.0% |
| ! | TTCATGCATGCTTCATTTTC+AGG | - | chr7.4:34255683-34255702 | MS.gene95648:CDS | 35.0% |
| !! | TCAGACTGTTACTTGTTTTC+AGG | - | chr7.4:34252773-34252792 | MS.gene95648:intron | 35.0% |
| !! | TGGTATTCCTGATTTTAGTC+AGG | - | chr7.4:34252737-34252756 | MS.gene95648:intron | 35.0% |
| !!! | TTACTTGTTTTCAGGTTCGT+TGG | - | chr7.4:34252781-34252800 | MS.gene95648:intron | 35.0% |
| !!! | TTTTCAGGTATTCTGTGAAG+AGG | - | chr7.4:34255698-34255717 | MS.gene95648:CDS | 35.0% |
| AAAATCACTTGGGGTGTGTT+TGG | + | chr7.4:34253757-34253776 | None:intergenic | 40.0% | |
| AAGTTCCAATGAAATGGGGA+TGG | + | chr7.4:34254667-34254686 | None:intergenic | 40.0% | |
| ACTACATGTTTGAATTGGGG+TGG | - | chr7.4:34253135-34253154 | MS.gene95648:CDS | 40.0% | |
| AGGAAAATGTTGGACAACCA+AGG | - | chr7.4:34255595-34255614 | MS.gene95648:CDS | 40.0% | |
| ATAGGCTGTGGTGAATAACT+TGG | - | chr7.4:34253930-34253949 | MS.gene95648:intron | 40.0% | |
| ATCTTCCTGATAAACAACGG+AGG | - | chr7.4:34255479-34255498 | MS.gene95648:CDS | 40.0% | |
| CAATGTCAAGTAACTCACCT+TGG | + | chr7.4:34255615-34255634 | None:intergenic | 40.0% | |
| CACTTGGCTATTGTAAAACG+GGG | - | chr7.4:34253259-34253278 | MS.gene95648:CDS | 40.0% | |
| CATAGGATATTTGTCCCAGA+TGG | - | chr7.4:34254944-34254963 | MS.gene95648:intron | 40.0% | |
| CCACCAACAATACAAACAAG+CGG | + | chr7.4:34252669-34252688 | None:intergenic | 40.0% | |
| CTACATGTTTGAATTGGGGT+GGG | - | chr7.4:34253136-34253155 | MS.gene95648:CDS | 40.0% | |
| CTCAACTCCTGACTAAAATC+AGG | + | chr7.4:34252747-34252766 | None:intergenic | 40.0% | |
| GATGCAATTCACAATGGTGA+AGG | - | chr7.4:34255575-34255594 | MS.gene95648:CDS | 40.0% | |
| GCAGTAAAACCTGTACTAGT+AGG | - | chr7.4:34254530-34254549 | MS.gene95648:intron | 40.0% | |
| GGACCCAATTCTAACGATTA+TGG | - | chr7.4:34252687-34252706 | MS.gene95648:CDS | 40.0% | |
| GGGTGAGTTTGAAGAACTTA+AGG | - | chr7.4:34253502-34253521 | MS.gene95648:CDS | 40.0% | |
| GTAAAACCTGTACTAGTAGG+TGG | - | chr7.4:34254533-34254552 | MS.gene95648:intron | 40.0% | |
| GTAGAAGAGGAACCGATTAT+TGG | - | chr7.4:34254401-34254420 | MS.gene95648:intron | 40.0% | |
| GTAGATTGAGTAACCACATG+GGG | - | chr7.4:34254465-34254484 | MS.gene95648:intron | 40.0% | |
| TAGCCAAGTGTATGCATGTT+TGG | + | chr7.4:34253249-34253268 | None:intergenic | 40.0% | |
| TGAATTAGCAGCAAGTTTGG+TGG | - | chr7.4:34254255-34254274 | MS.gene95648:intron | 40.0% | |
| TGTATCCTCCGTTGTTTATC+AGG | + | chr7.4:34255487-34255506 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr7.4:34253743-34253762 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr7.4:34253739-34253758 | None:intergenic | 40.0% | |
| ! | AACTTAAGGGTGTGTTTGGA+TGG | - | chr7.4:34253516-34253535 | MS.gene95648:CDS | 40.0% |
| ! | CATCTGGGACAAATATCCTA+TGG | + | chr7.4:34254946-34254965 | None:intergenic | 40.0% |
| ! | GAAGAACTTAAGGGTGTGTT+TGG | - | chr7.4:34253512-34253531 | MS.gene95648:CDS | 40.0% |
| ! | GACTTCAAAGGTTTTCCATC+TGG | + | chr7.4:34254962-34254981 | None:intergenic | 40.0% |
| ! | TGGTTACTTTCACTGTTGGT+GGG | - | chr7.4:34252598-34252617 | MS.gene95648:CDS | 40.0% |
| ! | TGTGTGGTTACTTTCACTGT+TGG | - | chr7.4:34252594-34252613 | MS.gene95648:CDS | 40.0% |
| ! | TTGCCGCTTGTTTGTATTGT+TGG | - | chr7.4:34252663-34252682 | MS.gene95648:CDS | 40.0% |
| !! | CTGATTTTAGTCAGGAGTTG+AGG | - | chr7.4:34252745-34252764 | MS.gene95648:intron | 40.0% |
| !! | TCTTTTGGTGCAGACTTCAA+AGG | + | chr7.4:34254974-34254993 | None:intergenic | 40.0% |
| AAAGTGGGATGAGGAATACC+AGG | + | chr7.4:34254042-34254061 | None:intergenic | 45.0% | |
| AAGCAAAGAGCTGCTTGAGT+GGG | - | chr7.4:34255806-34255825 | MS.gene95648:CDS | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr7.4:34255293-34255312 | MS.gene95648:intron | 45.0% | |
| ACAGGATCACGACTGAAAGT+GGG | + | chr7.4:34254057-34254076 | None:intergenic | 45.0% | |
| ACATCCAAATGCAGGTCCAT+TGG | + | chr7.4:34254852-34254871 | None:intergenic | 45.0% | |
| ACTTGGGAGCGAGTGAAAAA+GGG | + | chr7.4:34254080-34254099 | None:intergenic | 45.0% | |
| ATTGAGTAACCACATGGGGT+TGG | - | chr7.4:34254469-34254488 | MS.gene95648:intron | 45.0% | |
| CAACGGAGGATACACAATTG+AGG | - | chr7.4:34255493-34255512 | MS.gene95648:CDS | 45.0% | |
| CAACTAAGTGCATGCATGCT+TGG | + | chr7.4:34253862-34253881 | None:intergenic | 45.0% | |
| CATGAAACGACGTCGTTGTT+TGG | + | chr7.4:34252318-34252337 | None:intergenic | 45.0% | |
| CCGCTTGTTTGTATTGTTGG+TGG | - | chr7.4:34252666-34252685 | MS.gene95648:CDS | 45.0% | |
| GCTGATGCATACTTGTTTGC+CGG | - | chr7.4:34254734-34254753 | MS.gene95648:intron | 45.0% | |
| GGTCCAAACATGCATACACT+TGG | - | chr7.4:34253243-34253262 | MS.gene95648:CDS | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr7.4:34255236-34255255 | MS.gene95648:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr7.4:34253740-34253759 | None:intergenic | 45.0% | |
| TACTTGGGAGCGAGTGAAAA+AGG | + | chr7.4:34254081-34254100 | None:intergenic | 45.0% | |
| TGAAATTGCCTGAGGGATGT+GGG | - | chr7.4:34255098-34255117 | MS.gene95648:intron | 45.0% | |
| TGCATCAGCTAGTTCGACAA+AGG | + | chr7.4:34254591-34254610 | None:intergenic | 45.0% | |
| TGCTTTACAGGTAACTGCAC+AGG | - | chr7.4:34255418-34255437 | MS.gene95648:CDS | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr7.4:34253526-34253545 | MS.gene95648:CDS | 45.0% | |
| TTAGCTGTCGAACTCACTAG+TGG | - | chr7.4:34253222-34253241 | MS.gene95648:CDS | 45.0% | |
| TTGAAATTGCCTGAGGGATG+TGG | - | chr7.4:34255097-34255116 | MS.gene95648:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr7.4:34253738-34253757 | None:intergenic | 45.0% | |
| TTGGGGTGTGTTTGGATTGA+GGG | + | chr7.4:34253749-34253768 | None:intergenic | 45.0% | |
| TTTCTTTGGTCCTGTTGCTG+TGG | + | chr7.4:34255742-34255761 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr7.4:34253530-34253549 | MS.gene95648:CDS | 45.0% | |
| ! | AGGATGTATCGACAATGCTG+AGG | - | chr7.4:34255438-34255457 | MS.gene95648:CDS | 45.0% |
| ! | CAAGTTTGGTGGAATCATGG+TGG | - | chr7.4:34254266-34254285 | MS.gene95648:intron | 45.0% |
| ! | CAGCAAGTTTGGTGGAATCA+TGG | - | chr7.4:34254263-34254282 | MS.gene95648:intron | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr7.4:34255299-34255318 | MS.gene95648:intron | 45.0% |
| ! | GTGGTTACTTTCACTGTTGG+TGG | - | chr7.4:34252597-34252616 | MS.gene95648:CDS | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr7.4:34253520-34253539 | MS.gene95648:CDS | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | - | chr7.4:34253519-34253538 | MS.gene95648:CDS | 45.0% |
| !! | CATTGGTGATGGAAGCTTTC+AGG | - | chr7.4:34255310-34255329 | MS.gene95648:intron | 45.0% |
| !! | TTATTGGGGTGCTGTGAGTA+CGG | - | chr7.4:34254685-34254704 | MS.gene95648:intron | 45.0% |
| AACACTTACCCACATCCCTC+AGG | + | chr7.4:34255109-34255128 | None:intergenic | 50.0% | |
| AAGCAATCACTCGCTTCTCG+GGG | + | chr7.4:34255289-34255308 | None:intergenic | 50.0% | |
| AATCATTGTGCAGCCCGATC+GGG | - | chr7.4:34254817-34254836 | MS.gene95648:intron | 50.0% | |
| ACAGCTGTGATTGCTGAGAC+AGG | - | chr7.4:34255049-34255068 | MS.gene95648:intron | 50.0% | |
| AGCAAAGAGCTGCTTGAGTG+GGG | - | chr7.4:34255807-34255826 | MS.gene95648:CDS | 50.0% | |
| AGCTGTGATTGCTGAGACAG+GGG | - | chr7.4:34255051-34255070 | MS.gene95648:intron | 50.0% | |
| AGTAGGTGGTCCCAAACTGA+GGG | - | chr7.4:34254547-34254566 | MS.gene95648:intron | 50.0% | |
| ATGAAATGGGGATGGTGCTC+AGG | + | chr7.4:34254659-34254678 | None:intergenic | 50.0% | |
| ATTGACGAGATGGTCGAGGA+GGG | + | chr7.4:34252484-34252503 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr7.4:34253734-34253753 | None:intergenic | 50.0% | |
| ATTGGCAACCACAACCCGAT+CGG | + | chr7.4:34254834-34254853 | None:intergenic | 50.0% | |
| CAAGCAAAGAGCTGCTTGAG+TGG | - | chr7.4:34255805-34255824 | MS.gene95648:CDS | 50.0% | |
| CAAGCAATCACTCGCTTCTC+GGG | + | chr7.4:34255290-34255309 | None:intergenic | 50.0% | |
| CAATCATTGTGCAGCCCGAT+CGG | - | chr7.4:34254816-34254835 | MS.gene95648:intron | 50.0% | |
| CAGCTGTGATTGCTGAGACA+GGG | - | chr7.4:34255050-34255069 | MS.gene95648:intron | 50.0% | |
| CCCTTTAGCTGATGGCATCA+CGG | + | chr7.4:34254630-34254649 | None:intergenic | 50.0% | |
| CCGTGATGCCATCAGCTAAA+GGG | - | chr7.4:34254627-34254646 | MS.gene95648:intron | 50.0% | |
| CGACCATCTCGTCAATGAAC+CGG | - | chr7.4:34252488-34252507 | MS.gene95648:intron | 50.0% | |
| CTTGGGGTGTGTTTGGATTG+AGG | + | chr7.4:34253750-34253769 | None:intergenic | 50.0% | |
| GAAGCAATTGCCACAGCAAC+AGG | - | chr7.4:34255729-34255748 | MS.gene95648:CDS | 50.0% | |
| GACAGGATCACGACTGAAAG+TGG | + | chr7.4:34254058-34254077 | None:intergenic | 50.0% | |
| GAGCACCATCCCCATTTCAT+TGG | - | chr7.4:34254659-34254678 | MS.gene95648:intron | 50.0% | |
| GATGCCATCAGCTAAAGGGA+TGG | - | chr7.4:34254631-34254650 | MS.gene95648:intron | 50.0% | |
| GCAAGCAATCACTCGCTTCT+CGG | + | chr7.4:34255291-34255310 | None:intergenic | 50.0% | |
| GCTATTGGCAGCAGAAACTC+TGG | + | chr7.4:34255835-34255854 | None:intergenic | 50.0% | |
| GTCGAACTAGCTGATGCAAG+TGG | - | chr7.4:34254593-34254612 | MS.gene95648:intron | 50.0% | |
| GTTCATTGACGAGATGGTCG+AGG | + | chr7.4:34252488-34252507 | None:intergenic | 50.0% | |
| GTTGCCAATGGACCTGCATT+TGG | - | chr7.4:34254845-34254864 | MS.gene95648:intron | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr7.4:34253529-34253548 | MS.gene95648:CDS | 50.0% | |
| TAGTAGGTGGTCCCAAACTG+AGG | - | chr7.4:34254546-34254565 | MS.gene95648:intron | 50.0% | |
| TCACGACTGAAAGTGGGATG+AGG | + | chr7.4:34254051-34254070 | None:intergenic | 50.0% | |
| TGAAATGGGGATGGTGCTCA+GGG | + | chr7.4:34254658-34254677 | None:intergenic | 50.0% | |
| TGCTGTAACGAGCTGAATGC+TGG | - | chr7.4:34252528-34252547 | MS.gene95648:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr7.4:34255248-34255267 | MS.gene95648:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr7.4:34253733-34253752 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr7.4:34253531-34253550 | MS.gene95648:CDS | 50.0% | |
| TTGGGACCACCTACTAGTAC+AGG | + | chr7.4:34254542-34254561 | None:intergenic | 50.0% | |
| ! | AATGCTGGTTATGCGGCTGA+CGG | - | chr7.4:34252543-34252562 | MS.gene95648:CDS | 50.0% |
| ! | CGAGCTGAATGCTGGTTATG+CGG | - | chr7.4:34252536-34252555 | MS.gene95648:CDS | 50.0% |
| ! | GCTTTTGCCACCCTCAGTTT+GGG | + | chr7.4:34254560-34254579 | None:intergenic | 50.0% |
| ! | GTATCGACAATGCTGAGGTG+TGG | - | chr7.4:34255443-34255462 | MS.gene95648:CDS | 50.0% |
| ! | TGCTTTTGCCACCCTCAGTT+TGG | + | chr7.4:34254561-34254580 | None:intergenic | 50.0% |
| !! | AGCATTGGCTGTAACTTGCC+TGG | - | chr7.4:34254021-34254040 | MS.gene95648:intron | 50.0% |
| !! | TGACGCCGACTTGAACTAGT+CGG | + | chr7.4:34252425-34252444 | None:intergenic | 50.0% |
| AGGATTTGGGGGACGGCTAT+TGG | + | chr7.4:34255850-34255869 | None:intergenic | 55.0% | |
| ATCGCGGTGGATGGTTGGAT+CGG | + | chr7.4:34252363-34252382 | None:intergenic | 55.0% | |
| ATGCGGCTGACGGTTATGCT+CGG | - | chr7.4:34252553-34252572 | MS.gene95648:CDS | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr7.4:34253535-34253554 | MS.gene95648:CDS | 55.0% | |
| CAACCGATGAGGTTCAGCTC+CGG | + | chr7.4:34252510-34252529 | None:intergenic | 55.0% | |
| CATTGACGAGATGGTCGAGG+AGG | + | chr7.4:34252485-34252504 | None:intergenic | 55.0% | |
| GAACCGGAGCTGAACCTCAT+CGG | - | chr7.4:34252504-34252523 | MS.gene95648:intron | 55.0% | |
| GACGCTTCGCAAGTGCCTTT+AGG | + | chr7.4:34254892-34254911 | None:intergenic | 55.0% | |
| GCCGTGATGCCATCAGCTAA+AGG | - | chr7.4:34254626-34254645 | MS.gene95648:intron | 55.0% | |
| GCTCCGGTTCATTGACGAGA+TGG | + | chr7.4:34252494-34252513 | None:intergenic | 55.0% | |
| GCTCGTTACAGCAACCGATG+AGG | + | chr7.4:34252521-34252540 | None:intergenic | 55.0% | |
| GGAGCGAGTGAAAAAGGGAC+AGG | + | chr7.4:34254075-34254094 | None:intergenic | 55.0% | |
| GGGACCATCCCTTTAGCTGA+TGG | + | chr7.4:34254638-34254657 | None:intergenic | 55.0% | |
| TATGCTCGGTCACGTGGTGT+CGG | - | chr7.4:34252567-34252586 | MS.gene95648:CDS | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr7.4:34253536-34253555 | MS.gene95648:CDS | 55.0% | |
| TTGCTGAGACAGGGGACTCA+TGG | - | chr7.4:34255059-34255078 | MS.gene95648:intron | 55.0% | |
| TTGGCAACCACAACCCGATC+GGG | + | chr7.4:34254833-34254852 | None:intergenic | 55.0% | |
| ! | GATCGGGTTGTGGTTGCCAA+TGG | - | chr7.4:34254833-34254852 | MS.gene95648:intron | 55.0% |
| ! | GCACGCCGACTAGTTCAAGT+CGG | - | chr7.4:34252417-34252436 | MS.gene95648:CDS | 55.0% |
| ACCGACGTCTTCTCCGTTCC+GGG | - | chr7.4:34252444-34252463 | MS.gene95648:intron | 60.0% | |
| AGACGATCGCGGTGGATGGT+TGG | + | chr7.4:34252368-34252387 | None:intergenic | 60.0% | |
| AGGGTGAGGTTGAAGTCGCC+CGG | + | chr7.4:34252465-34252484 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr7.4:34253539-34253558 | MS.gene95648:CDS | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr7.4:34253558-34253539 | None:intergenic | 60.0% | |
| AGGTGGTCCCAAACTGAGGG+TGG | - | chr7.4:34254550-34254569 | MS.gene95648:intron | 60.0% | |
| CACCGACGTCTTCTCCGTTC+CGG | - | chr7.4:34252443-34252462 | MS.gene95648:intron | 60.0% | |
| GAACTAGTCGGCGTGCGAGA+TGG | + | chr7.4:34252413-34252432 | None:intergenic | 60.0% | |
| GACGGTTATGCTCGGTCACG+TGG | - | chr7.4:34252561-34252580 | MS.gene95648:CDS | 60.0% | |
| GAGGTTGAAGTCGCCCGGAA+CGG | + | chr7.4:34252460-34252479 | None:intergenic | 60.0% | |
| GGGGTTGGAAGCAGCAGTTG+AGG | - | chr7.4:34254484-34254503 | MS.gene95648:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr7.4:34253540-34253559 | MS.gene95648:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr7.4:34253559-34253540 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr7.4:34253541-34253560 | MS.gene95648:CDS | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr7.4:34253560-34253541 | None:intergenic | 60.0% | |
| GTCTCCTGCGACGCTACACT+CGG | - | chr7.4:34252384-34252403 | MS.gene95648:CDS | 60.0% | |
| ! | CTGCTGCTTCCAACCCCATG+TGG | + | chr7.4:34254481-34254500 | None:intergenic | 60.0% |
| !! | ACGTGGTGTCGGTGCTTGTG+TGG | - | chr7.4:34252578-34252597 | MS.gene95648:CDS | 60.0% |
| AGCGTCGCAGGAGACGATCG+CGG | + | chr7.4:34252379-34252398 | None:intergenic | 65.0% | |
| CAGGAGACGATCGCGGTGGA+TGG | + | chr7.4:34252372-34252391 | None:intergenic | 65.0% | |
| CGAGATGGTCGAGGAGGGTG+AGG | + | chr7.4:34252479-34252498 | None:intergenic | 65.0% | |
| CTAGTCGGCGTGCGAGATGG+CGG | + | chr7.4:34252410-34252429 | None:intergenic | 65.0% | |
| GCCCGGAACGGAGAAGACGT+CGG | + | chr7.4:34252448-34252467 | None:intergenic | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr7.4:34253545-34253564 | MS.gene95648:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr7.4:34253564-34253545 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr7.4:34253544-34253563 | MS.gene95648:CDS | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr7.4:34253563-34253544 | None:intergenic | 65.0% | |
| ! | TGTGCAGCCCGATCGGGTTG+TGG | - | chr7.4:34254823-34254842 | MS.gene95648:intron | 65.0% |
| GTCGCAGGAGACGATCGCGG+TGG | + | chr7.4:34252376-34252395 | None:intergenic | 70.0% | |
| GCGGCCGAGTGTAGCGTCGC+AGG | + | chr7.4:34252391-34252410 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 34252276 | 34255875 | 34252276 | ID=MS.gene95648 |
| chr7.4 | mRNA | 34252276 | 34255875 | 34252276 | ID=MS.gene95648.t1;Parent=MS.gene95648 |
| chr7.4 | exon | 34255357 | 34255875 | 34255357 | ID=MS.gene95648.t1.exon1;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34255357 | 34255875 | 34255357 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| chr7.4 | exon | 34254054 | 34254217 | 34254054 | ID=MS.gene95648.t1.exon2;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34254054 | 34254217 | 34254054 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| chr7.4 | exon | 34253032 | 34253682 | 34253032 | ID=MS.gene95648.t1.exon3;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34253032 | 34253682 | 34253032 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| chr7.4 | exon | 34252820 | 34252937 | 34252820 | ID=MS.gene95648.t1.exon4;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34252820 | 34252937 | 34252820 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| chr7.4 | exon | 34252535 | 34252723 | 34252535 | ID=MS.gene95648.t1.exon5;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34252535 | 34252723 | 34252535 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| chr7.4 | exon | 34252276 | 34252446 | 34252276 | ID=MS.gene95648.t1.exon6;Parent=MS.gene95648.t1 |
| chr7.4 | CDS | 34252276 | 34252446 | 34252276 | ID=cds.MS.gene95648.t1;Parent=MS.gene95648.t1 |
| Gene Sequence |
| Protein sequence |
