Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95649.t1 | XP_003623318.1 | 97 | 605 | 18 | 0 | 1 | 605 | 1 | 605 | 0.00E+00 | 1190.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95649.t1 | Q9FFT4 | 82.6 | 608 | 102 | 2 | 1 | 605 | 1 | 607 | 4.0e-299 | 1028.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95649.t1 | G7KSB5 | 97.0 | 605 | 18 | 0 | 1 | 605 | 1 | 605 | 0.0e+00 | 1190.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26127 | MS.gene95649 | PPI |
| MS.gene95649 | MS.gene02654 | PPI |
| MS.gene81956 | MS.gene95649 | PPI |
| MS.gene02655 | MS.gene95649 | PPI |
| MS.gene95649 | MS.gene02651 | PPI |
| MS.gene33522 | MS.gene95649 | PPI |
| MS.gene95649 | MS.gene013671 | PPI |
| MS.gene013678 | MS.gene95649 | PPI |
| MS.gene81954 | MS.gene95649 | PPI |
| MS.gene95649 | MS.gene02488 | PPI |
| MS.gene064505 | MS.gene95649 | PPI |
| MS.gene95649 | MS.gene017382 | PPI |
| MS.gene81957 | MS.gene95649 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95649.t1 | MTR_7g069540 | 97.025 | 605 | 18 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1216 |
| MS.gene95649.t1 | MTR_7g069500 | 86.446 | 605 | 52 | 4 | 1 | 605 | 1 | 575 | 0.0 | 1053 |
| MS.gene95649.t1 | MTR_4g017200 | 84.868 | 608 | 88 | 3 | 1 | 605 | 1 | 607 | 0.0 | 1052 |
| MS.gene95649.t1 | MTR_5g046610 | 84.539 | 608 | 90 | 3 | 1 | 605 | 1 | 607 | 0.0 | 1048 |
| MS.gene95649.t1 | MTR_2g015560 | 79.232 | 573 | 119 | 0 | 33 | 605 | 10 | 582 | 0.0 | 956 |
| MS.gene95649.t1 | MTR_2g009330 | 68.761 | 573 | 179 | 0 | 30 | 602 | 37 | 609 | 0.0 | 865 |
| MS.gene95649.t1 | MTR_5g046620 | 50.622 | 241 | 42 | 5 | 235 | 474 | 1 | 165 | 1.44e-64 | 209 |
| MS.gene95649.t1 | MTR_3g099190 | 24.364 | 550 | 354 | 21 | 20 | 533 | 47 | 570 | 1.36e-20 | 96.7 |
| MS.gene95649.t1 | MTR_2g013120 | 23.077 | 546 | 361 | 17 | 21 | 533 | 55 | 574 | 4.07e-18 | 88.6 |
| MS.gene95649.t1 | MTR_1g011530 | 59.649 | 57 | 20 | 1 | 351 | 407 | 31 | 84 | 5.40e-17 | 77.0 |
| MS.gene95649.t1 | MTR_2g027220 | 21.799 | 578 | 404 | 18 | 13 | 560 | 31 | 590 | 4.63e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95649.t1 | AT4G33070 | 82.566 | 608 | 102 | 2 | 1 | 605 | 1 | 607 | 0.0 | 1050 |
| MS.gene95649.t1 | AT5G01320 | 82.149 | 605 | 106 | 2 | 1 | 605 | 1 | 603 | 0.0 | 1046 |
| MS.gene95649.t1 | AT5G54960 | 82.566 | 608 | 102 | 2 | 1 | 605 | 1 | 607 | 0.0 | 1046 |
| MS.gene95649.t1 | AT5G01330 | 84.211 | 570 | 90 | 0 | 36 | 605 | 23 | 592 | 0.0 | 1015 |
| MS.gene95649.t1 | AT5G17380 | 24.498 | 498 | 312 | 15 | 49 | 511 | 18 | 486 | 8.31e-19 | 90.5 |
| MS.gene95649.t1 | AT3G48560 | 22.989 | 522 | 330 | 19 | 49 | 533 | 103 | 589 | 2.91e-15 | 79.7 |
Find 156 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTGATGGAAGCTTTC+AGG | 0.099113 | 7.4:-34239347 | MS.gene95649:intron |
| CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7.4:-34239976 | MS.gene95649:CDS |
| TCAAACCGTTACTTGCTTTC+AGG | 0.174097 | 7.4:-34241478 | MS.gene95649:intron |
| CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7.4:-34239975 | MS.gene95649:CDS |
| TCAGAAATTTACTGAGGATT+TGG | 0.232172 | 7.4:+34238795 | None:intergenic |
| CAGAAATTTACTGAGGATTT+GGG | 0.251027 | 7.4:+34238796 | None:intergenic |
| AAACATAAGCTATCTTTCTT+TGG | 0.266263 | 7.4:+34238903 | None:intergenic |
| TGTATCCTCCGTTGTTTATC+AGG | 0.267154 | 7.4:+34239182 | None:intergenic |
| TTAACTCTCAAAGGTTCTTT+TGG | 0.268831 | 7.4:+34239659 | None:intergenic |
| CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7.4:+34239975 | None:intergenic |
| CCTCAGGCAATTTCAACTTT+TGG | 0.294722 | 7.4:+34239555 | None:intergenic |
| AAAATGGACACAATGTTATT+AGG | 0.318529 | 7.4:-34241984 | MS.gene95649:CDS |
| CAACCGATTACATTAAGTTT+TGG | 0.318903 | 7.4:+34241744 | None:intergenic |
| CTTCCATAATCATTGGAGTT+AGG | 0.319203 | 7.4:+34241561 | None:intergenic |
| GGACCTAACTCCAATGATTA+TGG | 0.329425 | 7.4:-34241564 | MS.gene95649:CDS |
| AGTTGCTTGAGTGGGGTTCC+AGG | 0.345377 | 7.4:-34238842 | MS.gene95649:CDS |
| CCTGTTACTTCCATAATCAT+TGG | 0.361965 | 7.4:+34241554 | None:intergenic |
| CATCCAAATGCAGGTCCATT+AGG | 0.362065 | 7.4:+34239797 | None:intergenic |
| CAAATGCAATATGGTTCAAT+TGG | 0.362759 | 7.4:-34239433 | MS.gene95649:CDS |
| TATGAGTTTCAAATGCAATA+TGG | 0.365373 | 7.4:-34239442 | MS.gene95649:CDS |
| CAGCTAATGCTTATGTAAAC+AGG | 0.372535 | 7.4:+34240565 | None:intergenic |
| GGAACCATCCCTTTAGTTGA+TGG | 0.380151 | 7.4:+34240010 | None:intergenic |
| ATTCCTAATGGACCTGCATT+TGG | 0.380487 | 7.4:-34239800 | MS.gene95649:CDS |
| CAAGCAATCACTCGCTTCTC+AGG | 0.386751 | 7.4:+34239370 | None:intergenic |
| ATCTGATGCCTTTGTCGAAC+TGG | 0.388724 | 7.4:-34240065 | MS.gene95649:CDS |
| CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7.4:+34239133 | None:intergenic |
| GAGCATCATCCCCATTTCAT+TGG | 0.391076 | 7.4:-34239986 | MS.gene95649:CDS |
| CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7.4:+34239976 | None:intergenic |
| GATCGAGTTGTGATTCCTAA+TGG | 0.392105 | 7.4:-34239812 | MS.gene95649:CDS |
| TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7.4:-34241588 | MS.gene95649:CDS |
| CTTCAACTCTTGGCTGAAAT+CGG | 0.394398 | 7.4:+34241506 | None:intergenic |
| TTTGAAAACACTTCAACTCT+TGG | 0.398759 | 7.4:+34241496 | None:intergenic |
| AACGTCGTTGGCCGTTGGCT+TGG | 0.404111 | 7.4:+34241947 | None:intergenic |
| GCTGATGCATACTTGTTTGC+CGG | 0.407651 | 7.4:-34239911 | MS.gene95649:CDS |
| CTGCTGCTTCCAACCCCATC+TGG | 0.410581 | 7.4:+34240167 | None:intergenic |
| GAAGCAATTGCAACAGCAAC+AGG | 0.414187 | 7.4:-34238927 | MS.gene95649:CDS |
| TGGTCTGTTGGTGCAACTCT+TGG | 0.424487 | 7.4:-34239409 | MS.gene95649:CDS |
| TACTTGGGAGCGCGTGAAAA+CGG | 0.426685 | 7.4:+34240496 | None:intergenic |
| TGCAATATGGTTCAATTGGT+TGG | 0.427968 | 7.4:-34239429 | MS.gene95649:CDS |
| GACGCTTCGCAAGTGCCTTA+AGG | 0.428488 | 7.4:+34239756 | None:intergenic |
| ACAACATTTGTTGTATATGT+TGG | 0.429950 | 7.4:+34239627 | None:intergenic |
| CCAATGATTATGGAAGTAAC+AGG | 0.436409 | 7.4:-34241554 | MS.gene95649:CDS |
| GAACCAAAACTTAATGTAAT+CGG | 0.446267 | 7.4:-34241747 | MS.gene95649:CDS |
| ACTTGGGAGCGCGTGAAAAC+GGG | 0.449334 | 7.4:+34240497 | None:intergenic |
| GGTTCAATTGGTTGGTCTGT+TGG | 0.450672 | 7.4:-34239421 | MS.gene95649:CDS |
| CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7.4:-34239132 | MS.gene95649:CDS |
| TTTAATGACTACAGTTCTGT+TGG | 0.454813 | 7.4:-34239881 | MS.gene95649:CDS |
| TGGTTACTTTCACTGTTGGT+GGG | 0.456606 | 7.4:-34241653 | MS.gene95649:CDS |
| ACAGTTGTGATCGCTGAGAC+AGG | 0.461785 | 7.4:-34239596 | MS.gene95649:CDS |
| AAAAGTGGGGTGAGGAATTG+AGG | 0.461915 | 7.4:+34240534 | None:intergenic |
| GTTGTTTATCAGGAAGATGA+TGG | 0.461963 | 7.4:+34239192 | None:intergenic |
| GTGGCGGCCTAGTGTGGCAT+TGG | 0.463472 | 7.4:+34241860 | None:intergenic |
| CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7.4:-34238880 | MS.gene95649:CDS |
| GTTGATGAATGATTTCCTTA+AGG | 0.466656 | 7.4:-34239771 | MS.gene95649:CDS |
| TATGCTCGGTCGCGTGGCGT+AGG | 0.472862 | 7.4:-34241684 | MS.gene95649:CDS |
| GACAGGTTCACGACTAAAAG+TGG | 0.473332 | 7.4:+34240519 | None:intergenic |
| GCCTAGTGTGGCATTGGCCG+AGG | 0.477226 | 7.4:+34241866 | None:intergenic |
| CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7.4:-34239974 | MS.gene95649:CDS |
| GTGGTTACTTTCACTGTTGG+TGG | 0.479303 | 7.4:-34241654 | MS.gene95649:CDS |
| ATGAAATGGGGATGATGCTC+CGG | 0.480053 | 7.4:+34239989 | None:intergenic |
| CGTTTGGGACAAATATCCTA+TGG | 0.482173 | 7.4:+34239702 | None:intergenic |
| TTAGGACCACCTACTAGTAC+AGG | 0.482399 | 7.4:+34240106 | None:intergenic |
| TTAGGAATCACAACTCGATC+GGG | 0.484512 | 7.4:+34239815 | None:intergenic |
| CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7.4:-34241585 | MS.gene95649:CDS |
| GAAATAACGTCGTTGGCCGT+TGG | 0.485345 | 7.4:+34241942 | None:intergenic |
| TTAATGACTACAGTTCTGTT+GGG | 0.485436 | 7.4:-34239880 | MS.gene95649:CDS |
| AGTGTTCTTAATGCTATAGC+TGG | 0.489938 | 7.4:-34241627 | MS.gene95649:CDS |
| TTGAAATTGCCTGAGGGATG+TGG | 0.492977 | 7.4:-34239548 | MS.gene95649:CDS |
| CTGTGATGCCATCAACTAAA+GGG | 0.496539 | 7.4:-34240018 | MS.gene95649:CDS |
| AGGATTCTTCATCATACCAT+TGG | 0.504484 | 7.4:-34241534 | MS.gene95649:CDS |
| TGCTAGGTGGCGGCCTAGTG+TGG | 0.507530 | 7.4:+34241854 | None:intergenic |
| ATTGAGGTTGAAATTCATGA+TGG | 0.507826 | 7.4:-34239157 | MS.gene95649:CDS |
| CACTAGGCCGCCACCTAGCA+CGG | 0.508955 | 7.4:-34241851 | MS.gene95649:CDS |
| TGTGTGGTTACTTTCACTGT+TGG | 0.515269 | 7.4:-34241657 | MS.gene95649:CDS |
| TGTTGTAACGAGCTCAATGC+TGG | 0.516769 | 7.4:-34241723 | MS.gene95649:CDS |
| GCTGTGATGCCATCAACTAA+AGG | 0.516772 | 7.4:-34240019 | MS.gene95649:CDS |
| TGCATTCTGTGCCGAGATTG+TGG | 0.516790 | 7.4:-34239939 | MS.gene95649:CDS |
| GTTGCTTGAGTGGGGTTCCA+GGG | 0.517387 | 7.4:-34238841 | MS.gene95649:CDS |
| CTTGAACTAGCCTCCGTGCT+AGG | 0.520163 | 7.4:+34241838 | None:intergenic |
| AACATAACATTAACTCTCAA+AGG | 0.524430 | 7.4:+34239650 | None:intergenic |
| TTGTAGATTGACTAACCAGA+TGG | 0.530616 | 7.4:-34240182 | MS.gene95649:intron |
| CTAGCCTCCGTGCTAGGTGG+CGG | 0.532869 | 7.4:+34241844 | None:intergenic |
| AAGCAAAGAGTTGCTTGAGT+GGG | 0.534030 | 7.4:-34238850 | MS.gene95649:CDS |
| AGTTGTGATCGCTGAGACAG+GGG | 0.535530 | 7.4:-34239594 | MS.gene95649:CDS |
| CATAGGATATTTGTCCCAAA+CGG | 0.538007 | 7.4:-34239701 | MS.gene95649:CDS |
| ATCAGCAGATTCCACAATCT+CGG | 0.539436 | 7.4:+34239928 | None:intergenic |
| AAAGTGGGGTGAGGAATTGA+GGG | 0.544961 | 7.4:+34240535 | None:intergenic |
| GAGGAAATCACCGTCGGTGA+CGG | 0.545895 | 7.4:+34241885 | None:intergenic |
| ATTAGGAATCACAACTCGAT+CGG | 0.551999 | 7.4:+34239814 | None:intergenic |
| AACACTTACCCACATCCCTC+AGG | 0.552088 | 7.4:+34239539 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7.4:-34239358 | MS.gene95649:CDS |
| TGTGCATGAAATAACGTCGT+TGG | 0.558295 | 7.4:+34241935 | None:intergenic |
| ATCAACTAAAGGGATGGTTC+CGG | 0.560189 | 7.4:-34240008 | MS.gene95649:CDS |
| TCGCTGAGACAGGGGACTCA+TGG | 0.562029 | 7.4:-34239586 | MS.gene95649:CDS |
| TTGCATATGAAAACTACCAT+AGG | 0.564951 | 7.4:-34239718 | MS.gene95649:CDS |
| GCAGTGAAACCTGTACTAGT+AGG | 0.566996 | 7.4:-34240115 | MS.gene95649:CDS |
| TGTAGATTGACTAACCAGAT+GGG | 0.567208 | 7.4:-34240181 | MS.gene95649:intron |
| TCCTCGGCCAATGCCACACT+AGG | 0.568177 | 7.4:-34241867 | MS.gene95649:CDS |
| CAAGCAAAGAGTTGCTTGAG+TGG | 0.571229 | 7.4:-34238851 | MS.gene95649:CDS |
| ATTGACTAACCAGATGGGGT+TGG | 0.572238 | 7.4:-34240176 | MS.gene95649:CDS |
| ATCAACACACATCCAAATGC+AGG | 0.572501 | 7.4:+34239788 | None:intergenic |
| GTCACCGACGGTGATTTCCT+CGG | 0.574380 | 7.4:-34241883 | MS.gene95649:CDS |
| AGAAATTTACTGAGGATTTG+GGG | 0.574448 | 7.4:+34238797 | None:intergenic |
| GGAGCGCGTGAAAACGGGAC+AGG | 0.574468 | 7.4:+34240502 | None:intergenic |
| GAGGTTGAAGTCACCAGGAA+CGG | 0.578670 | 7.4:+34241794 | None:intergenic |
| GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7.4:-34239091 | MS.gene95649:CDS |
| CGCATCTGCCAGTTCGACAA+AGG | 0.582374 | 7.4:+34240057 | None:intergenic |
| CAGTTGTGATCGCTGAGACA+GGG | 0.583349 | 7.4:-34239595 | MS.gene95649:CDS |
| AGCGTGAGGTTGAAGTCACC+AGG | 0.585897 | 7.4:+34241789 | None:intergenic |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7.4:-34239364 | MS.gene95649:CDS |
| ATCAAGAACTGGAATTACAC+TGG | 0.587582 | 7.4:-34239121 | MS.gene95649:CDS |
| GATGGTTATGCTCGGTCGCG+TGG | 0.588769 | 7.4:-34241690 | MS.gene95649:CDS |
| AACTCTTGGCTATGCACAAG+CGG | 0.593075 | 7.4:-34239395 | MS.gene95649:CDS |
| AATGCTGGTTACGCAGCAGA+TGG | 0.598495 | 7.4:-34241708 | MS.gene95649:CDS |
| AGCTATACAGCCGTCACCGA+CGG | 0.600396 | 7.4:-34241895 | MS.gene95649:CDS |
| GCTATTGGCAGCAGACACCC+TGG | 0.600864 | 7.4:+34238824 | None:intergenic |
| AGCAAAGAGTTGCTTGAGTG+GGG | 0.601698 | 7.4:-34238849 | MS.gene95649:CDS |
| ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7.4:-34239081 | MS.gene95649:CDS |
| GTCGAACTGGCAGATGCGAG+TGG | 0.610851 | 7.4:-34240052 | MS.gene95649:CDS |
| ATAGGCTGTGGTGAATCACT+TGG | 0.612910 | 7.4:-34240644 | MS.gene95649:intron |
| GCTGAAATCGGATATTCCAA+TGG | 0.613643 | 7.4:+34241518 | None:intergenic |
| AGGAAAATGTTGGACTACCA+AGG | 0.615414 | 7.4:-34239071 | MS.gene95649:intron |
| GGGGTTGGAAGCAGCAGTTG+AGG | 0.620039 | 7.4:-34240161 | MS.gene95649:CDS |
| ACAGGTTCACGACTAAAAGT+GGG | 0.620615 | 7.4:+34240520 | None:intergenic |
| CAACGGAGGATACACAATTG+AGG | 0.625719 | 7.4:-34239173 | MS.gene95649:CDS |
| CCAAAAGTTGAAATTGCCTG+AGG | 0.627567 | 7.4:-34239555 | MS.gene95649:CDS |
| AGTAGGTGGTCCTAAACTGA+GGG | 0.628023 | 7.4:-34240098 | MS.gene95649:CDS |
| GCACGGAGGCTAGTTCAAGT+TGG | 0.635115 | 7.4:-34241834 | MS.gene95649:CDS |
| TCACGACTAAAAGTGGGGTG+AGG | 0.639430 | 7.4:+34240526 | None:intergenic |
| GAAATTTACTGAGGATTTGG+GGG | 0.640710 | 7.4:+34238798 | None:intergenic |
| ACGCAGCAGATGGTTATGCT+CGG | 0.642962 | 7.4:-34241698 | MS.gene95649:CDS |
| GCGTGGCGTAGGAGCTTGTG+TGG | 0.647933 | 7.4:-34241673 | MS.gene95649:CDS |
| GATGCCATCAACTAAAGGGA+TGG | 0.647936 | 7.4:-34240014 | MS.gene95649:CDS |
| TTTAGACTTAACCAAGCCAA+CGG | 0.649940 | 7.4:-34241958 | MS.gene95649:CDS |
| TAGTAGGTGGTCCTAAACTG+AGG | 0.652385 | 7.4:-34240099 | MS.gene95649:CDS |
| GTAGATTGACTAACCAGATG+GGG | 0.652566 | 7.4:-34240180 | MS.gene95649:intron |
| TGAAATTGCCTGAGGGATGT+GGG | 0.655016 | 7.4:-34239547 | MS.gene95649:intron |
| GAACTAGCCTCCGTGCTAGG+TGG | 0.656560 | 7.4:+34241841 | None:intergenic |
| AGGTGGTCCTAAACTGAGGG+TGG | 0.656562 | 7.4:-34240095 | MS.gene95649:CDS |
| TGTATAGCTGTTGTACTGTG+TGG | 0.659057 | 7.4:+34241909 | None:intergenic |
| CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7.4:+34239977 | None:intergenic |
| CCACCAACAATACAAATAAG+CGG | 0.661697 | 7.4:+34241585 | None:intergenic |
| ATCATCTTCCTGATAAACAA+CGG | 0.665526 | 7.4:-34239190 | MS.gene95649:CDS |
| ACTGGTTCAGAAATTTACTG+AGG | 0.666835 | 7.4:+34238789 | None:intergenic |
| ACCAACCTGAAAGCAAGTAA+CGG | 0.670459 | 7.4:+34241473 | None:intergenic |
| GTGAAACCTGTACTAGTAGG+TGG | 0.673798 | 7.4:-34240112 | MS.gene95649:CDS |
| GTATCAACAATGCTGAGGCG+TGG | 0.674637 | 7.4:-34239223 | MS.gene95649:CDS |
| TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7.4:-34239097 | MS.gene95649:CDS |
| CAAAAGTTGAAATTGCCTGA+GGG | 0.678314 | 7.4:-34239554 | MS.gene95649:CDS |
| ACCAGGAACGGAGAAAATGT+CGG | 0.679198 | 7.4:+34241806 | None:intergenic |
| AAGATGTATCAACAATGCTG+AGG | 0.686738 | 7.4:-34239228 | MS.gene95649:CDS |
| TGAGGTGGTCGAGTAGCGTG+AGG | 0.689838 | 7.4:+34241775 | None:intergenic |
| TTGGCCGAGGAAATCACCGT+CGG | 0.689959 | 7.4:+34241879 | None:intergenic |
| ATCTTCCTGATAAACAACGG+AGG | 0.706663 | 7.4:-34239187 | MS.gene95649:CDS |
| TAGGCCGCCACCTAGCACGG+AGG | 0.717710 | 7.4:-34241848 | MS.gene95649:CDS |
| CAGGTTCACGACTAAAAGTG+GGG | 0.719162 | 7.4:+34240521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTATATGATTAATTTTG+TGG | - | chr7.4:34239764-34239783 | MS.gene95649:CDS | 15.0% |
| !!! | TCTAAGATATTGTAAAAATT+TGG | + | chr7.4:34239338-34239357 | None:intergenic | 15.0% |
| !! | AAATCAATCCAAAAACTAAA+CGG | + | chr7.4:34239868-34239887 | None:intergenic | 20.0% |
| !! | AACAACACTTTATACTAAAT+AGG | + | chr7.4:34239970-34239989 | None:intergenic | 20.0% |
| !! | ACAACACTTTATACTAAATA+GGG | + | chr7.4:34239969-34239988 | None:intergenic | 20.0% |
| !! | AGAAAAAAATGAGGAAAATT+TGG | + | chr7.4:34241296-34241315 | None:intergenic | 20.0% |
| !! | CACATTTATAATAATGAGTT+TGG | + | chr7.4:34240533-34240552 | None:intergenic | 20.0% |
| !! | TTATTATAAATGTGCATGTT+TGG | - | chr7.4:34240539-34240558 | MS.gene95649:CDS | 20.0% |
| !!! | AGTATAAAGTGTTGTTAAAT+AGG | - | chr7.4:34239974-34239993 | MS.gene95649:CDS | 20.0% |
| !!! | AGTTTGTTGTTTGTAAAAAA+CGG | - | chr7.4:34240081-34240100 | MS.gene95649:CDS | 20.0% |
| !!! | GTATAAAGTGTTGTTAAATA+GGG | - | chr7.4:34239975-34239994 | MS.gene95649:CDS | 20.0% |
| !!! | TATAAAGTGTTGTTAAATAG+GGG | - | chr7.4:34239976-34239995 | MS.gene95649:CDS | 20.0% |
| !!! | TTTTACAATATCTTAGATTC+TGG | - | chr7.4:34239341-34239360 | MS.gene95649:intron | 20.0% |
| ! | AAACATAAGCTATCTTTCTT+TGG | + | chr7.4:34241884-34241903 | None:intergenic | 25.0% |
| ! | AACATAACATTAACTCTCAA+AGG | + | chr7.4:34241137-34241156 | None:intergenic | 25.0% |
| ! | AACCAATTAAGTGAATGTTT+AGG | + | chr7.4:34240575-34240594 | None:intergenic | 25.0% |
| ! | AACTGTAGTCATTAAAAATG+GGG | + | chr7.4:34240899-34240918 | None:intergenic | 25.0% |
| ! | AGAACTGTAGTCATTAAAAA+TGG | + | chr7.4:34240901-34240920 | None:intergenic | 25.0% |
| ! | GAACCAAAACTTAATGTAAT+CGG | - | chr7.4:34239037-34239056 | MS.gene95649:intron | 25.0% |
| ! | GAACTGTAGTCATTAAAAAT+GGG | + | chr7.4:34240900-34240919 | None:intergenic | 25.0% |
| ! | TATGAGTTTCAAATGCAATA+TGG | - | chr7.4:34241342-34241361 | MS.gene95649:intron | 25.0% |
| ! | TCTTCTATATCTTCTATAAC+AGG | - | chr7.4:34241773-34241792 | MS.gene95649:CDS | 25.0% |
| !! | AGCTTTTGATAAAATCACTA+CGG | + | chr7.4:34240466-34240485 | None:intergenic | 25.0% |
| !! | TTGTTATTGATATAGTGTAG+CGG | - | chr7.4:34240002-34240021 | MS.gene95649:CDS | 25.0% |
| !! | TTTTATCAAAAGCTACACTA+AGG | - | chr7.4:34240472-34240491 | MS.gene95649:intron | 25.0% |
| !!! | AAGGAGTTTTAAAAGAATCA+TGG | - | chr7.4:34240491-34240510 | MS.gene95649:intron | 25.0% |
| !!! | ACAACATTTGTTGTATATGT+TGG | + | chr7.4:34241160-34241179 | None:intergenic | 25.0% |
| !!! | GTTTGTTGTTTGTAAAAAAC+GGG | - | chr7.4:34240082-34240101 | MS.gene95649:CDS | 25.0% |
| !!! | TATTTTCAACTAGTCTATAG+TGG | - | chr7.4:34239894-34239913 | MS.gene95649:CDS | 25.0% |
| !!! | TTTTCCTCATTTTTTTCTAG+TGG | - | chr7.4:34241298-34241317 | MS.gene95649:intron | 25.0% |
| AAAGAGAGAAAGACTTACTT+GGG | + | chr7.4:34240306-34240325 | None:intergenic | 30.0% | |
| AAAGTTTACACCAAACTTGA+CGG | - | chr7.4:34240416-34240435 | MS.gene95649:intron | 30.0% | |
| ATCACCACTAGAAAAAAATG+AGG | + | chr7.4:34241305-34241324 | None:intergenic | 30.0% | |
| ATCATCTTCCTGATAAACAA+CGG | - | chr7.4:34241594-34241613 | MS.gene95649:CDS | 30.0% | |
| ATTGAGGTTGAAATTCATGA+TGG | - | chr7.4:34241627-34241646 | MS.gene95649:CDS | 30.0% | |
| ATTGCAGAACAATAACGATT+TGG | + | chr7.4:34239945-34239964 | None:intergenic | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr7.4:34241351-34241370 | MS.gene95649:intron | 30.0% | |
| CAATAAGTTCCAATGAAATG+GGG | + | chr7.4:34240810-34240829 | None:intergenic | 30.0% | |
| CATACAATGTTATCAAGAAC+TGG | - | chr7.4:34241652-34241671 | MS.gene95649:CDS | 30.0% | |
| CATTTCATTGGAACTTATTG+GGG | - | chr7.4:34240810-34240829 | MS.gene95649:intron | 30.0% | |
| CCAATAAGTTCCAATGAAAT+GGG | + | chr7.4:34240811-34240830 | None:intergenic | 30.0% | |
| CCATTTCATTGGAACTTATT+GGG | - | chr7.4:34240809-34240828 | MS.gene95649:intron | 30.0% | |
| GAAGATATAGAAGAAGTTTG+AGG | + | chr7.4:34241767-34241786 | None:intergenic | 30.0% | |
| GACCTAAACATTCACTTAAT+TGG | - | chr7.4:34240570-34240589 | MS.gene95649:CDS | 30.0% | |
| GGTGATAAAATCTTGTTGAT+AGG | - | chr7.4:34241319-34241338 | MS.gene95649:intron | 30.0% | |
| TTAATGACTACAGTTCTGTT+GGG | - | chr7.4:34240904-34240923 | MS.gene95649:intron | 30.0% | |
| TTCAACAACTTGTGTGTATT+TGG | - | chr7.4:34240345-34240364 | MS.gene95649:intron | 30.0% | |
| TTGATTGATGCAATTCACAA+TGG | - | chr7.4:34241687-34241706 | MS.gene95649:CDS | 30.0% | |
| TTGCATATGAAAACTACCAT+AGG | - | chr7.4:34241066-34241085 | MS.gene95649:intron | 30.0% | |
| TTTAATGACTACAGTTCTGT+TGG | - | chr7.4:34240903-34240922 | MS.gene95649:intron | 30.0% | |
| TTTGAAAACACTTCAACTCT+TGG | + | chr7.4:34239291-34239310 | None:intergenic | 30.0% | |
| ! | CAACCGATTACATTAAGTTT+TGG | + | chr7.4:34239043-34239062 | None:intergenic | 30.0% |
| ! | CAGTTCTTGATAACATTGTA+TGG | + | chr7.4:34241654-34241673 | None:intergenic | 30.0% |
| ! | GATTTGGTCAAATTCTACTT+AGG | + | chr7.4:34239929-34239948 | None:intergenic | 30.0% |
| ! | GTTGATGAATGATTTCCTTA+AGG | - | chr7.4:34241013-34241032 | MS.gene95649:intron | 30.0% |
| ! | TCTTAACTTCAATGTTTTGC+AGG | - | chr7.4:34241524-34241543 | MS.gene95649:CDS | 30.0% |
| ! | TTAACTCTCAAAGGTTCTTT+TGG | + | chr7.4:34241128-34241147 | None:intergenic | 30.0% |
| !! | ATTGTGGTTGATTTGGTAAT+AGG | - | chr7.4:34240122-34240141 | MS.gene95649:CDS | 30.0% |
| !!! | TGTTTTGATTGTGGTTGATT+TGG | - | chr7.4:34240115-34240134 | MS.gene95649:CDS | 30.0% |
| AAGATGTATCAACAATGCTG+AGG | - | chr7.4:34241556-34241575 | MS.gene95649:CDS | 35.0% | |
| ACAATGGTGAAGGAAAATGT+TGG | - | chr7.4:34241703-34241722 | MS.gene95649:CDS | 35.0% | |
| AGGATTCTTCATCATACCAT+TGG | - | chr7.4:34239250-34239269 | MS.gene95649:intron | 35.0% | |
| AGTGTTCTTAATGCTATAGC+TGG | - | chr7.4:34239157-34239176 | MS.gene95649:CDS | 35.0% | |
| ATCAAGAACTGGAATTACAC+TGG | - | chr7.4:34241663-34241682 | MS.gene95649:CDS | 35.0% | |
| ATTAGGAATCACAACTCGAT+CGG | + | chr7.4:34240973-34240992 | None:intergenic | 35.0% | |
| CAAAAGTTGAAATTGCCTGA+GGG | - | chr7.4:34241230-34241249 | MS.gene95649:intron | 35.0% | |
| CAAAGAGAGAAAGACTTACT+TGG | + | chr7.4:34240307-34240326 | None:intergenic | 35.0% | |
| CAGCTAATGCTTATGTAAAC+AGG | + | chr7.4:34240222-34240241 | None:intergenic | 35.0% | |
| CATAGGATATTTGTCCCAAA+CGG | - | chr7.4:34241083-34241102 | MS.gene95649:intron | 35.0% | |
| CATTGAAGTGATTGTTCACA+AGG | - | chr7.4:34241904-34241923 | MS.gene95649:CDS | 35.0% | |
| CCAATGATTATGGAAGTAAC+AGG | - | chr7.4:34239230-34239249 | MS.gene95649:CDS | 35.0% | |
| CCACAATCAAAACAATCATC+AGG | + | chr7.4:34240109-34240128 | None:intergenic | 35.0% | |
| CCACCAACAATACAAATAAG+CGG | + | chr7.4:34239202-34239221 | None:intergenic | 35.0% | |
| CCCAATAAGTTCCAATGAAA+TGG | + | chr7.4:34240812-34240831 | None:intergenic | 35.0% | |
| CCCATTTCATTGGAACTTAT+TGG | - | chr7.4:34240808-34240827 | MS.gene95649:intron | 35.0% | |
| CTTCCATAATCATTGGAGTT+AGG | + | chr7.4:34239226-34239245 | None:intergenic | 35.0% | |
| GTCAAATTCCACAGCTATAA+CGG | + | chr7.4:34239402-34239421 | None:intergenic | 35.0% | |
| GTGGTTATAATGGTAGTCAA+TGG | - | chr7.4:34239550-34239569 | MS.gene95649:CDS | 35.0% | |
| GTTATAATGGTAGTCAATGG+TGG | - | chr7.4:34239553-34239572 | MS.gene95649:CDS | 35.0% | |
| GTTGTTTATCAGGAAGATGA+TGG | + | chr7.4:34241595-34241614 | None:intergenic | 35.0% | |
| TGCAATATGGTTCAATTGGT+TGG | - | chr7.4:34241355-34241374 | MS.gene95649:intron | 35.0% | |
| TGTAGATTGACTAACCAGAT+GGG | - | chr7.4:34240603-34240622 | MS.gene95649:CDS | 35.0% | |
| TTAAAAAGCCGTTATAGCTG+TGG | - | chr7.4:34239391-34239410 | MS.gene95649:CDS | 35.0% | |
| TTGTAGATTGACTAACCAGA+TGG | - | chr7.4:34240602-34240621 | MS.gene95649:CDS | 35.0% | |
| TTTAGACTTAACCAAGCCAA+CGG | - | chr7.4:34238826-34238845 | MS.gene95649:CDS | 35.0% | |
| ! | ACTTCAAAGGTTTTCCGTTT+GGG | + | chr7.4:34241100-34241119 | None:intergenic | 35.0% |
| ! | CCTGTTACTTCCATAATCAT+TGG | + | chr7.4:34239233-34239252 | None:intergenic | 35.0% |
| ! | TTGCCGCTTATTTGTATTGT+TGG | - | chr7.4:34239196-34239215 | MS.gene95649:CDS | 35.0% |
| !! | AGTAACTGACTTTTCGTGTT+AGG | - | chr7.4:34240389-34240408 | MS.gene95649:intron | 35.0% |
| !! | TCATGCATGCTTCATTTTTC+AGG | - | chr7.4:34241811-34241830 | MS.gene95649:CDS | 35.0% |
| !! | TTGGTTGGTGATAGTCAAAA+TGG | - | chr7.4:34239677-34239696 | MS.gene95649:CDS | 35.0% |
| !!! | CCTGATGATTGTTTTGATTG+TGG | - | chr7.4:34240106-34240125 | MS.gene95649:CDS | 35.0% |
| !!! | TAAGTTTTGGTTCATCGATG+AGG | + | chr7.4:34239030-34239049 | None:intergenic | 35.0% |
| !!! | TTTTCAGGTTTTCTGTGAAG+AGG | - | chr7.4:34241826-34241845 | MS.gene95649:CDS | 35.0% |
| AAAAACTAAACGGCCTTTCG+GGG | + | chr7.4:34239858-34239877 | None:intergenic | 40.0% | |
| AAAACTTACGCGACTAACAC+TGG | - | chr7.4:34240034-34240053 | MS.gene95649:CDS | 40.0% | |
| AAGCAAAGAGTTGCTTGAGT+GGG | - | chr7.4:34241934-34241953 | MS.gene95649:CDS | 40.0% | |
| ACAGGTTCACGACTAAAAGT+GGG | + | chr7.4:34240267-34240286 | None:intergenic | 40.0% | |
| ACCAACCTGAAAGCAAGTAA+CGG | + | chr7.4:34239314-34239333 | None:intergenic | 40.0% | |
| AGGAAAATGTTGGACTACCA+AGG | - | chr7.4:34241713-34241732 | MS.gene95649:CDS | 40.0% | |
| ATCAACACACATCCAAATGC+AGG | + | chr7.4:34240999-34241018 | None:intergenic | 40.0% | |
| ATCAACTAAAGGGATGGTTC+CGG | - | chr7.4:34240776-34240795 | MS.gene95649:intron | 40.0% | |
| ATCAGCAGATTCCACAATCT+CGG | + | chr7.4:34240859-34240878 | None:intergenic | 40.0% | |
| ATCTTCCTGATAAACAACGG+AGG | - | chr7.4:34241597-34241616 | MS.gene95649:CDS | 40.0% | |
| CAAAAACTAAACGGCCTTTC+GGG | + | chr7.4:34239859-34239878 | None:intergenic | 40.0% | |
| CCAAAAACTAAACGGCCTTT+CGG | + | chr7.4:34239860-34239879 | None:intergenic | 40.0% | |
| CCAAAAGTTGAAATTGCCTG+AGG | - | chr7.4:34241229-34241248 | MS.gene95649:intron | 40.0% | |
| CCGCTTATTTGTATTGTTGG+TGG | - | chr7.4:34239199-34239218 | MS.gene95649:CDS | 40.0% | |
| CTCTATTCACATCTCCAATC+TGG | + | chr7.4:34239579-34239598 | None:intergenic | 40.0% | |
| CTGTGATGCCATCAACTAAA+GGG | - | chr7.4:34240766-34240785 | MS.gene95649:intron | 40.0% | |
| CTTCAACTCTTGGCTGAAAT+CGG | + | chr7.4:34239281-34239300 | None:intergenic | 40.0% | |
| GATGCAATTCACAATGGTGA+AGG | - | chr7.4:34241693-34241712 | MS.gene95649:CDS | 40.0% | |
| GATGTGAATAGAGTGGTGAT+CGG | - | chr7.4:34239586-34239605 | MS.gene95649:CDS | 40.0% | |
| GATTGGAGATGTGAATAGAG+TGG | - | chr7.4:34239579-34239598 | MS.gene95649:CDS | 40.0% | |
| GCTGAAATCGGATATTCCAA+TGG | + | chr7.4:34239269-34239288 | None:intergenic | 40.0% | |
| GGACCTAACTCCAATGATTA+TGG | - | chr7.4:34239220-34239239 | MS.gene95649:CDS | 40.0% | |
| GTAGATTGACTAACCAGATG+GGG | - | chr7.4:34240604-34240623 | MS.gene95649:CDS | 40.0% | |
| GTAGTCATTAAAAATGGGGC+CGG | + | chr7.4:34240895-34240914 | None:intergenic | 40.0% | |
| GTCAAAGTGATGATAGGTGT+TGG | - | chr7.4:34239658-34239677 | MS.gene95649:CDS | 40.0% | |
| GTGAGTTTCGCATAATCACA+GGG | - | chr7.4:34240438-34240457 | MS.gene95649:intron | 40.0% | |
| TCAAACCGTTACTTGCTTTC+AGG | - | chr7.4:34239306-34239325 | MS.gene95649:intron | 40.0% | |
| TGTATAGCTGTTGTACTGTG+TGG | + | chr7.4:34238878-34238897 | None:intergenic | 40.0% | |
| TGTATCCTCCGTTGTTTATC+AGG | + | chr7.4:34241605-34241624 | None:intergenic | 40.0% | |
| TGTGCATGAAATAACGTCGT+TGG | + | chr7.4:34238852-34238871 | None:intergenic | 40.0% | |
| TTAGGAATCACAACTCGATC+GGG | + | chr7.4:34240972-34240991 | None:intergenic | 40.0% | |
| ! | ATTCCTAATGGACCTGCATT+TGG | - | chr7.4:34240984-34241003 | MS.gene95649:intron | 40.0% |
| ! | CCTCAGGCAATTTCAACTTT+TGG | + | chr7.4:34241232-34241251 | None:intergenic | 40.0% |
| ! | CGTTTGGGACAAATATCCTA+TGG | + | chr7.4:34241085-34241104 | None:intergenic | 40.0% |
| ! | GACTTCAAAGGTTTTCCGTT+TGG | + | chr7.4:34241101-34241120 | None:intergenic | 40.0% |
| ! | GATCGAGTTGTGATTCCTAA+TGG | - | chr7.4:34240972-34240991 | MS.gene95649:intron | 40.0% |
| ! | TGGTTACTTTCACTGTTGGT+GGG | - | chr7.4:34239131-34239150 | MS.gene95649:CDS | 40.0% |
| ! | TGTGTGGTTACTTTCACTGT+TGG | - | chr7.4:34239127-34239146 | MS.gene95649:CDS | 40.0% |
| !! | AAGTGATGATAGGTGTTGGT+TGG | - | chr7.4:34239662-34239681 | MS.gene95649:CDS | 40.0% |
| !! | GTTGATTTGGTAATAGGCTG+TGG | - | chr7.4:34240128-34240147 | MS.gene95649:CDS | 40.0% |
| !! | GTTGGTGATAGTCAAAATGG+TGG | - | chr7.4:34239680-34239699 | MS.gene95649:CDS | 40.0% |
| !!! | TCTTTTGGCTCAGACTTCAA+AGG | + | chr7.4:34241113-34241132 | None:intergenic | 40.0% |
| AAAAGTGGGGTGAGGAATTG+AGG | + | chr7.4:34240253-34240272 | None:intergenic | 45.0% | |
| AAACTTCCAAACACCCCGAA+AGG | - | chr7.4:34239842-34239861 | MS.gene95649:CDS | 45.0% | |
| AAAGTGGGGTGAGGAATTGA+GGG | + | chr7.4:34240252-34240271 | None:intergenic | 45.0% | |
| AACTCTTGGCTATGCACAAG+CGG | - | chr7.4:34241389-34241408 | MS.gene95649:intron | 45.0% | |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr7.4:34241420-34241439 | MS.gene95649:intron | 45.0% | |
| AATAGAGTGGTGATCGGAGA+GGG | - | chr7.4:34239592-34239611 | MS.gene95649:CDS | 45.0% | |
| ACCAGGAACGGAGAAAATGT+CGG | + | chr7.4:34238981-34239000 | None:intergenic | 45.0% | |
| AGCAAAGAGTTGCTTGAGTG+GGG | - | chr7.4:34241935-34241954 | MS.gene95649:CDS | 45.0% | |
| AGTAGGTGGTCCTAAACTGA+GGG | - | chr7.4:34240686-34240705 | MS.gene95649:intron | 45.0% | |
| ATAGGCTGTGGTGAATCACT+TGG | - | chr7.4:34240140-34240159 | MS.gene95649:CDS | 45.0% | |
| ATCTGATGCCTTTGTCGAAC+TGG | - | chr7.4:34240719-34240738 | MS.gene95649:intron | 45.0% | |
| ATGAAATGGGGATGATGCTC+CGG | + | chr7.4:34240798-34240817 | None:intergenic | 45.0% | |
| ATTGACTAACCAGATGGGGT+TGG | - | chr7.4:34240608-34240627 | MS.gene95649:CDS | 45.0% | |
| CAACGGAGGATACACAATTG+AGG | - | chr7.4:34241611-34241630 | MS.gene95649:CDS | 45.0% | |
| CAAGCAAAGAGTTGCTTGAG+TGG | - | chr7.4:34241933-34241952 | MS.gene95649:CDS | 45.0% | |
| CAGGTTCACGACTAAAAGTG+GGG | + | chr7.4:34240266-34240285 | None:intergenic | 45.0% | |
| CATCCAAATGCAGGTCCATT+AGG | + | chr7.4:34240990-34241009 | None:intergenic | 45.0% | |
| GAAGCAATTGCAACAGCAAC+AGG | - | chr7.4:34241857-34241876 | MS.gene95649:CDS | 45.0% | |
| GACAGGTTCACGACTAAAAG+TGG | + | chr7.4:34240268-34240287 | None:intergenic | 45.0% | |
| GAGCATCATCCCCATTTCAT+TGG | - | chr7.4:34240798-34240817 | MS.gene95649:intron | 45.0% | |
| GATGCCATCAACTAAAGGGA+TGG | - | chr7.4:34240770-34240789 | MS.gene95649:intron | 45.0% | |
| GCAGTGAAACCTGTACTAGT+AGG | - | chr7.4:34240669-34240688 | MS.gene95649:intron | 45.0% | |
| GCTGATGCATACTTGTTTGC+CGG | - | chr7.4:34240873-34240892 | MS.gene95649:intron | 45.0% | |
| GCTGTGATGCCATCAACTAA+AGG | - | chr7.4:34240765-34240784 | MS.gene95649:intron | 45.0% | |
| GGAACCATCCCTTTAGTTGA+TGG | + | chr7.4:34240777-34240796 | None:intergenic | 45.0% | |
| GGTCAGAGTGGTGGTTATAA+TGG | - | chr7.4:34239540-34239559 | MS.gene95649:intron | 45.0% | |
| GGTGAGTTTCGCATAATCAC+AGG | - | chr7.4:34240437-34240456 | MS.gene95649:intron | 45.0% | |
| GTGAAACCTGTACTAGTAGG+TGG | - | chr7.4:34240672-34240691 | MS.gene95649:intron | 45.0% | |
| GTGGATGAAATGGTGACCAA+CGG | - | chr7.4:34239496-34239515 | MS.gene95649:intron | 45.0% | |
| GTGGTCAAAGGTGGATGAAA+TGG | - | chr7.4:34239486-34239505 | MS.gene95649:intron | 45.0% | |
| TAATGCTAACAAGTCACCGC+AGG | + | chr7.4:34239732-34239751 | None:intergenic | 45.0% | |
| TAGTAGGTGGTCCTAAACTG+AGG | - | chr7.4:34240685-34240704 | MS.gene95649:intron | 45.0% | |
| TGAAATTGCCTGAGGGATGT+GGG | - | chr7.4:34241237-34241256 | MS.gene95649:intron | 45.0% | |
| TGTTGTAACGAGCTCAATGC+TGG | - | chr7.4:34239061-34239080 | MS.gene95649:intron | 45.0% | |
| TTAGGACCACCTACTAGTAC+AGG | + | chr7.4:34240681-34240700 | None:intergenic | 45.0% | |
| TTGAAATTGCCTGAGGGATG+TGG | - | chr7.4:34241236-34241255 | MS.gene95649:intron | 45.0% | |
| ! | ACCGTTACTTGCTTTCAGGT+TGG | - | chr7.4:34239310-34239329 | MS.gene95649:intron | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr7.4:34241426-34241445 | MS.gene95649:intron | 45.0% |
| ! | GTGGTTACTTTCACTGTTGG+TGG | - | chr7.4:34239130-34239149 | MS.gene95649:CDS | 45.0% |
| !! | CATTGGTGATGGAAGCTTTC+AGG | - | chr7.4:34241437-34241456 | MS.gene95649:intron | 45.0% |
| !! | GGTTCAATTGGTTGGTCTGT+TGG | - | chr7.4:34241363-34241382 | MS.gene95649:intron | 45.0% |
| !! | TCGGGGTGTTTGGAAGTTTT+TGG | + | chr7.4:34239841-34239860 | None:intergenic | 45.0% |
| !! | TGGTGATGGTTGGTAGTGAT+CGG | - | chr7.4:34239628-34239647 | MS.gene95649:CDS | 45.0% |
| !!! | CCGAAAGGCCGTTTAGTTTT+TGG | - | chr7.4:34239857-34239876 | MS.gene95649:CDS | 45.0% |
| !!! | GTTTTGGTTCATCGATGAGG+TGG | + | chr7.4:34239027-34239046 | None:intergenic | 45.0% |
| AAATGGTGACCAACGGTGGT+TGG | - | chr7.4:34239503-34239522 | MS.gene95649:intron | 50.0% | |
| AACACTTACCCACATCCCTC+AGG | + | chr7.4:34241248-34241267 | None:intergenic | 50.0% | |
| AATGCTGGTCAGAGCAGTAG+TGG | - | chr7.4:34239467-34239486 | MS.gene95649:intron | 50.0% | |
| ACAGTTGTGATCGCTGAGAC+AGG | - | chr7.4:34241188-34241207 | MS.gene95649:intron | 50.0% | |
| ACGCAGCAGATGGTTATGCT+CGG | - | chr7.4:34239086-34239105 | MS.gene95649:CDS | 50.0% | |
| AGAGCAGTAGTGGTCAAAGG+TGG | - | chr7.4:34239477-34239496 | MS.gene95649:intron | 50.0% | |
| AGTTGTGATCGCTGAGACAG+GGG | - | chr7.4:34241190-34241209 | MS.gene95649:intron | 50.0% | |
| CAAGCAATCACTCGCTTCTC+AGG | + | chr7.4:34241417-34241436 | None:intergenic | 50.0% | |
| CAGTTGTGATCGCTGAGACA+GGG | - | chr7.4:34241189-34241208 | MS.gene95649:intron | 50.0% | |
| CGATGTCAAACGACTCACCT+TGG | + | chr7.4:34241733-34241752 | None:intergenic | 50.0% | |
| GAAATAACGTCGTTGGCCGT+TGG | + | chr7.4:34238845-34238864 | None:intergenic | 50.0% | |
| GAATAGAGTGGTGATCGGAG+AGG | - | chr7.4:34239591-34239610 | MS.gene95649:CDS | 50.0% | |
| GAGGTTGAAGTCACCAGGAA+CGG | + | chr7.4:34238993-34239012 | None:intergenic | 50.0% | |
| GATGAAATGGTGACCAACGG+TGG | - | chr7.4:34239499-34239518 | MS.gene95649:intron | 50.0% | |
| GCGAAACTCACCGTCAAGTT+TGG | + | chr7.4:34240429-34240448 | None:intergenic | 50.0% | |
| GTAGTCAATGGTGGCCAGAT+TGG | - | chr7.4:34239562-34239581 | MS.gene95649:CDS | 50.0% | |
| GTATCAACAATGCTGAGGCG+TGG | - | chr7.4:34241561-34241580 | MS.gene95649:CDS | 50.0% | |
| GTCAAATTCCGCAGCAATGC+TGG | - | chr7.4:34239452-34239471 | MS.gene95649:intron | 50.0% | |
| GTCAGAGCAGTAGTGGTCAA+AGG | - | chr7.4:34239474-34239493 | MS.gene95649:intron | 50.0% | |
| GTGGCGGTCAAAGTGATGAT+AGG | - | chr7.4:34239652-34239671 | MS.gene95649:CDS | 50.0% | |
| TCACGACTAAAAGTGGGGTG+AGG | + | chr7.4:34240261-34240280 | None:intergenic | 50.0% | |
| TGATCGGAGAGGGTTTGAGT+TGG | - | chr7.4:34239602-34239621 | MS.gene95649:CDS | 50.0% | |
| TGCATTCTGTGCCGAGATTG+TGG | - | chr7.4:34240845-34240864 | MS.gene95649:intron | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+TGG | - | chr7.4:34241375-34241394 | MS.gene95649:intron | 50.0% | |
| ! | AATGCTGGTTACGCAGCAGA+TGG | - | chr7.4:34239076-34239095 | MS.gene95649:CDS | 50.0% |
| ! | ACCGACATTTTCTCCGTTCC+TGG | - | chr7.4:34238977-34238996 | MS.gene95649:intron | 50.0% |
| ! | GATCGGAGAGGGTTTGAGTT+GGG | - | chr7.4:34239603-34239622 | MS.gene95649:CDS | 50.0% |
| ! | GCTTTTGCCACCCTCAGTTT+AGG | + | chr7.4:34240699-34240718 | None:intergenic | 50.0% |
| ! | TACTTGGGAGCGCGTGAAAA+CGG | + | chr7.4:34240291-34240310 | None:intergenic | 50.0% |
| ! | TGTTACTTAGCGAGCACCTG+CGG | - | chr7.4:34239713-34239732 | MS.gene95649:CDS | 50.0% |
| !! | ATCGGAGAGGGTTTGAGTTG+GGG | - | chr7.4:34239604-34239623 | MS.gene95649:CDS | 50.0% |
| !! | ATGGTTGGTAGTGATCGGAG+TGG | - | chr7.4:34239633-34239652 | MS.gene95649:CDS | 50.0% |
| !! | GTTTGAGTTGGGGTTGGTGA+TGG | - | chr7.4:34239614-34239633 | MS.gene95649:CDS | 50.0% |
| AGCGTGAGGTTGAAGTCACC+AGG | + | chr7.4:34238998-34239017 | None:intergenic | 55.0% | |
| AGCTATACAGCCGTCACCGA+CGG | - | chr7.4:34238889-34238908 | MS.gene95649:CDS | 55.0% | |
| AGGATTTGGGGGACGGCTAT+TGG | + | chr7.4:34241978-34241997 | None:intergenic | 55.0% | |
| AGGTGGTCCTAAACTGAGGG+TGG | - | chr7.4:34240689-34240708 | MS.gene95649:intron | 55.0% | |
| AGTTGCTTGAGTGGGGTTCC+AGG | - | chr7.4:34241942-34241961 | MS.gene95649:CDS | 55.0% | |
| CGCATCTGCCAGTTCGACAA+AGG | + | chr7.4:34240730-34240749 | None:intergenic | 55.0% | |
| GACGCTTCGCAAGTGCCTTA+AGG | + | chr7.4:34241031-34241050 | None:intergenic | 55.0% | |
| GAGGAAATCACCGTCGGTGA+CGG | + | chr7.4:34238902-34238921 | None:intergenic | 55.0% | |
| GTCACCGACGGTGATTTCCT+CGG | - | chr7.4:34238901-34238920 | MS.gene95649:CDS | 55.0% | |
| GTTGCTTGAGTGGGGTTCCA+GGG | - | chr7.4:34241943-34241962 | MS.gene95649:CDS | 55.0% | |
| TGCTCTGACCAGCATTGCTG+CGG | + | chr7.4:34239463-34239482 | None:intergenic | 55.0% | |
| TTGGCCGAGGAAATCACCGT+CGG | + | chr7.4:34238908-34238927 | None:intergenic | 55.0% | |
| ! | AAACGGCCTTTCGGGGTGTT+TGG | + | chr7.4:34239851-34239870 | None:intergenic | 55.0% |
| ! | ACTTGGGAGCGCGTGAAAAC+GGG | + | chr7.4:34240290-34240309 | None:intergenic | 55.0% |
| ! | CTTGAACTAGCCTCCGTGCT+AGG | + | chr7.4:34238949-34238968 | None:intergenic | 55.0% |
| ! | GCACGGAGGCTAGTTCAAGT+TGG | - | chr7.4:34238950-34238969 | MS.gene95649:CDS | 55.0% |
| !! | GAGAGGGTTTGAGTTGGGGT+TGG | - | chr7.4:34239608-34239627 | MS.gene95649:CDS | 55.0% |
| !! | GAGTTGGGGTTGGTGATGGT+TGG | - | chr7.4:34239618-34239637 | MS.gene95649:CDS | 55.0% |
| !! | GTTGGTAGTGATCGGAGTGG+CGG | - | chr7.4:34239636-34239655 | MS.gene95649:CDS | 55.0% |
| GATGGTTATGCTCGGTCGCG+TGG | - | chr7.4:34239094-34239113 | MS.gene95649:CDS | 60.0% | |
| GCTATTGGCAGCAGACACCC+TGG | + | chr7.4:34241963-34241982 | None:intergenic | 60.0% | |
| GGGGTTGGAAGCAGCAGTTG+AGG | - | chr7.4:34240623-34240642 | MS.gene95649:CDS | 60.0% | |
| GTCGAACTGGCAGATGCGAG+TGG | - | chr7.4:34240732-34240751 | MS.gene95649:intron | 60.0% | |
| TCCTCGGCCAATGCCACACT+AGG | - | chr7.4:34238917-34238936 | MS.gene95649:CDS | 60.0% | |
| TCGCTGAGACAGGGGACTCA+TGG | - | chr7.4:34241198-34241217 | MS.gene95649:intron | 60.0% | |
| TGAGGTGGTCGAGTAGCGTG+AGG | + | chr7.4:34239012-34239031 | None:intergenic | 60.0% | |
| TGGTGACCAACGGTGGTTGG+TGG | - | chr7.4:34239506-34239525 | MS.gene95649:intron | 60.0% | |
| ! | AACGTCGTTGGCCGTTGGCT+TGG | + | chr7.4:34238840-34238859 | None:intergenic | 60.0% |
| ! | CTGCTGCTTCCAACCCCATC+TGG | + | chr7.4:34240620-34240639 | None:intergenic | 60.0% |
| ! | GAACTAGCCTCCGTGCTAGG+TGG | + | chr7.4:34238946-34238965 | None:intergenic | 60.0% |
| !! | TGACCAACGGTGGTTGGTGG+TGG | - | chr7.4:34239509-34239528 | MS.gene95649:intron | 60.0% |
| CACTAGGCCGCCACCTAGCA+CGG | - | chr7.4:34238933-34238952 | MS.gene95649:CDS | 65.0% | |
| CAGCCACCACCAACCACCGT+TGG | + | chr7.4:34239515-34239534 | None:intergenic | 65.0% | |
| CTAGCCTCCGTGCTAGGTGG+CGG | + | chr7.4:34238943-34238962 | None:intergenic | 65.0% | |
| GCGTGGCGTAGGAGCTTGTG+TGG | - | chr7.4:34239111-34239130 | MS.gene95649:CDS | 65.0% | |
| GCTGGCAGTGGTCAGAGTGG+TGG | - | chr7.4:34239531-34239550 | MS.gene95649:intron | 65.0% | |
| GGAGCGCGTGAAAACGGGAC+AGG | + | chr7.4:34240285-34240304 | None:intergenic | 65.0% | |
| GTGGCGGCCTAGTGTGGCAT+TGG | + | chr7.4:34238927-34238946 | None:intergenic | 65.0% | |
| GTGGCTGGCAGTGGTCAGAG+TGG | - | chr7.4:34239528-34239547 | MS.gene95649:intron | 65.0% | |
| TATGCTCGGTCGCGTGGCGT+AGG | - | chr7.4:34239100-34239119 | MS.gene95649:CDS | 65.0% | |
| ! | TGCTAGGTGGCGGCCTAGTG+TGG | + | chr7.4:34238933-34238952 | None:intergenic | 65.0% |
| !! | CAACGGTGGTTGGTGGTGGC+TGG | - | chr7.4:34239513-34239532 | MS.gene95649:intron | 65.0% |
| !! | GCCTAGTGTGGCATTGGCCG+AGG | + | chr7.4:34238921-34238940 | None:intergenic | 65.0% |
| !! | TGGTTGGTGGTGGCTGGCAG+TGG | - | chr7.4:34239519-34239538 | MS.gene95649:intron | 65.0% |
| TAGGCCGCCACCTAGCACGG+AGG | - | chr7.4:34238936-34238955 | MS.gene95649:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 34238803 | 34242003 | 34238803 | ID=MS.gene95649 |
| chr7.4 | mRNA | 34238803 | 34242003 | 34238803 | ID=MS.gene95649.t1;Parent=MS.gene95649 |
| chr7.4 | exon | 34241479 | 34242003 | 34241479 | ID=MS.gene95649.t1.exon1;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34241479 | 34242003 | 34241479 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| chr7.4 | exon | 34240499 | 34240662 | 34240499 | ID=MS.gene95649.t1.exon2;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34240499 | 34240662 | 34240499 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| chr7.4 | exon | 34239548 | 34240198 | 34239548 | ID=MS.gene95649.t1.exon3;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34239548 | 34240198 | 34239548 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| chr7.4 | exon | 34239348 | 34239465 | 34239348 | ID=MS.gene95649.t1.exon4;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34239348 | 34239465 | 34239348 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| chr7.4 | exon | 34239072 | 34239260 | 34239072 | ID=MS.gene95649.t1.exon5;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34239072 | 34239260 | 34239072 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| chr7.4 | exon | 34238803 | 34238973 | 34238803 | ID=MS.gene95649.t1.exon6;Parent=MS.gene95649.t1 |
| chr7.4 | CDS | 34238803 | 34238973 | 34238803 | ID=cds.MS.gene95649.t1;Parent=MS.gene95649.t1 |
| Gene Sequence |
| Protein sequence |
