AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95931

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95931.t1 MTR_1g037550 90.519 559 27 2 1 533 1 559 0.0 991
MS.gene95931.t1 MTR_1g037560 79.713 557 87 2 1 533 1 555 0.0 887
MS.gene95931.t1 MTR_4g075110 71.220 549 118 5 6 530 26 558 0.0 782
MS.gene95931.t1 MTR_7g406990 73.141 417 72 6 20 403 1 410 0.0 573
MS.gene95931.t1 MTR_8g030590 42.941 510 252 9 43 521 9 510 2.98e-131 393
MS.gene95931.t1 MTR_8g098435 41.961 510 252 10 43 521 9 505 2.47e-128 384
MS.gene95931.t1 MTR_7g033570 39.328 506 266 7 40 521 6 494 4.64e-127 380
MS.gene95931.t1 MTR_7g033580 39.645 507 263 9 40 521 6 494 1.77e-125 376
MS.gene95931.t1 MTR_8g088470 37.575 503 274 6 43 521 5 491 1.66e-121 366
MS.gene95931.t1 MTR_5g070010 40.711 506 251 9 50 521 18 508 3.77e-117 355
MS.gene95931.t1 MTR_1g035670 36.739 509 289 7 38 522 4 503 3.96e-113 345
MS.gene95931.t1 MTR_6g004600 35.907 518 282 11 44 521 8 515 4.62e-112 343
MS.gene95931.t1 MTR_3g463060 38.966 503 229 11 68 528 40 506 1.11e-111 342
MS.gene95931.t1 MTR_1g035790 37.572 519 280 14 32 522 1 503 2.64e-111 340
MS.gene95931.t1 MTR_1g035760 37.195 492 287 9 38 522 4 480 5.95e-111 338
MS.gene95931.t1 MTR_1g035750 36.240 516 285 7 38 522 4 506 6.20e-111 339
MS.gene95931.t1 MTR_1g036130 36.381 514 288 9 38 522 4 507 2.56e-110 338
MS.gene95931.t1 MTR_1g036200 35.644 505 282 9 47 522 10 500 4.45e-108 332
MS.gene95931.t1 MTR_7g088330 39.648 512 260 16 43 521 13 508 1.47e-107 331
MS.gene95931.t1 MTR_6g004590 34.286 525 301 9 31 521 1 515 6.37e-106 327
MS.gene95931.t1 MTR_6g004670 35.294 510 288 10 41 521 9 505 5.17e-104 322
MS.gene95931.t1 MTR_1g035830 35.577 520 283 11 38 521 4 507 4.61e-103 319
MS.gene95931.t1 MTR_1g050362 35.630 508 285 11 47 522 10 507 1.34e-102 318
MS.gene95931.t1 MTR_6g004630 35.984 503 267 14 53 521 22 503 9.22e-102 316
MS.gene95931.t1 MTR_7g096340 38.344 459 225 10 96 522 71 503 1.51e-101 315
MS.gene95931.t1 MTR_1g036010 35.271 516 290 12 38 521 4 507 3.06e-100 312
MS.gene95931.t1 MTR_4g119660 37.072 526 270 14 43 522 6 516 5.75e-100 311
MS.gene95931.t1 MTR_1g035940 35.521 518 286 14 38 521 4 507 1.26e-99 310
MS.gene95931.t1 MTR_1g036270 35.673 513 281 13 46 521 11 511 1.87e-99 310
MS.gene95931.t1 MTR_1g035580 34.714 507 305 9 32 522 1 497 2.46e-99 309
MS.gene95931.t1 MTR_5g019140 36.053 527 275 14 43 522 20 531 3.38e-99 310
MS.gene95931.t1 MTR_4g054920 39.462 446 212 10 113 521 92 516 1.55e-97 305
MS.gene95931.t1 MTR_2g086040 39.908 436 211 8 109 518 85 495 1.99e-96 301
MS.gene95931.t1 MTR_3g080580 39.686 446 219 10 112 521 86 517 3.57e-96 302
MS.gene95931.t1 MTR_1g035800 34.302 516 298 9 39 521 5 512 4.20e-95 299
MS.gene95931.t1 MTR_7g096320 36.463 458 233 8 96 521 72 503 5.17e-94 296
MS.gene95931.t1 MTR_8g035780 36.907 485 262 13 68 523 43 512 6.33e-94 296
MS.gene95931.t1 MTR_6g004610 34.120 466 265 9 83 520 11 462 1.49e-93 293
MS.gene95931.t1 MTR_1g070345 37.731 432 242 8 112 525 86 508 2.71e-91 289
MS.gene95931.t1 MTR_1g102220 36.078 510 278 16 41 521 16 506 3.27e-90 286
MS.gene95931.t1 MTR_8g035810 36.689 447 246 10 98 517 70 506 5.16e-88 280
MS.gene95931.t1 MTR_8g035860 38.051 431 230 11 112 514 81 502 5.24e-88 280
MS.gene95931.t1 MTR_1g060550 37.613 444 219 12 112 521 93 512 1.30e-86 277
MS.gene95931.t1 MTR_1g070365 36.122 490 272 14 58 521 30 504 5.52e-86 275
MS.gene95931.t1 MTR_8g035760 34.719 481 269 13 68 521 49 511 5.55e-86 275
MS.gene95931.t1 MTR_8g035820 36.384 448 239 12 98 514 70 502 5.73e-86 275
MS.gene95931.t1 MTR_8g035680 35.062 482 257 16 68 516 49 507 1.39e-83 269
MS.gene95931.t1 MTR_7g029275 33.586 527 295 10 28 521 4 508 2.36e-83 268
MS.gene95931.t1 MTR_1g035860 32.584 445 267 6 43 463 15 450 7.60e-78 253
MS.gene95931.t1 MTR_8g035810 36.224 392 214 9 98 463 70 451 8.37e-73 239
MS.gene95931.t1 MTR_1g069715 33.333 426 234 12 119 509 2 412 4.85e-68 232
MS.gene95931.t1 MTR_1g102210 36.335 322 191 7 203 521 51 361 1.70e-62 209
MS.gene95931.t1 MTR_8g035680 34.409 372 194 12 178 516 6 360 1.29e-61 207
MS.gene95931.t1 MTR_4g012320 50.000 192 88 3 330 520 38 222 4.03e-59 196
MS.gene95931.t1 MTR_8g035810 32.716 324 183 8 98 395 70 384 2.89e-46 167
MS.gene95931.t1 MTR_1g070370 38.057 247 133 5 204 439 5 242 1.20e-41 150
MS.gene95931.t1 MTR_7g079440 25.325 462 301 19 96 533 219 660 5.23e-34 137
MS.gene95931.t1 MTR_5g009110 24.784 464 287 17 112 522 117 571 4.05e-28 118
MS.gene95931.t1 MTR_8g046580 50.495 101 49 1 396 496 193 292 5.20e-26 108
MS.gene95931.t1 MTR_8g046580 30.216 139 83 2 119 257 62 186 2.79e-17 83.2
MS.gene95931.t1 MTR_8g035790 51.485 101 45 3 425 523 1 99 6.65e-26 102
MS.gene95931.t1 MTR_5g009110 24.419 430 266 14 145 522 1 423 5.23e-25 107
MS.gene95931.t1 MTR_2g061750 33.690 187 102 5 110 279 13 194 9.60e-24 99.4
MS.gene95931.t1 MTR_2g061740 33.690 187 102 5 110 279 13 194 9.88e-24 99.4
MS.gene95931.t1 MTR_6g084040 34.463 177 92 7 46 219 11 166 4.96e-23 96.3
MS.gene95931.t1 MTR_1g062190 22.864 433 300 13 110 521 120 539 6.68e-22 99.8
MS.gene95931.t1 MTR_7g079440 24.324 370 240 16 96 444 219 569 2.86e-21 97.8
MS.gene95931.t1 MTR_7g006900 20.892 426 289 11 115 519 72 470 6.12e-21 96.3
MS.gene95931.t1 MTR_2g055430 23.702 443 285 14 105 520 101 517 2.75e-20 94.4
MS.gene95931.t1 MTR_8g042000 23.454 469 309 16 78 520 79 523 4.00e-19 90.9
MS.gene95931.t1 MTR_2g055470 23.476 443 286 16 105 520 101 517 8.42e-19 89.7
MS.gene95931.t1 MTR_6g017325 21.836 403 253 12 145 519 137 505 4.14e-18 87.8
MS.gene95931.t1 MTR_2g072270 24.873 394 257 11 144 516 143 518 1.05e-17 86.7
MS.gene95931.t1 MTR_5g009110 25.373 335 217 12 112 421 117 443 2.17e-17 85.1
MS.gene95931.t1 MTR_2g023680 22.779 439 294 13 105 520 101 517 2.72e-17 85.1
MS.gene95931.t1 MTR_1g023040 42.069 145 52 6 215 355 13 129 4.35e-17 79.0
MS.gene95931.t1 MTR_2g010290 26.471 272 181 8 261 521 269 532 5.36e-17 84.3
MS.gene95931.t1 MTR_2g072260 23.656 465 307 17 83 520 67 510 7.33e-17 84.0
MS.gene95931.t1 MTR_2g072400 23.077 442 290 17 105 520 98 515 9.71e-17 83.6
MS.gene95931.t1 MTR_2g072340 22.676 441 293 15 105 520 98 515 1.27e-16 83.2
MS.gene95931.t1 MTR_2g010250 31.383 188 117 6 338 521 326 505 3.54e-16 81.6
MS.gene95931.t1 MTR_4g062510 32.121 165 96 6 336 497 336 487 5.53e-16 81.3
MS.gene95931.t1 MTR_7g103450 26.241 282 153 13 269 520 250 506 5.59e-16 81.3
MS.gene95931.t1 MTR_2g073440 25.862 232 149 6 278 494 225 448 6.16e-16 80.9
MS.gene95931.t1 MTR_3g436540 22.481 516 308 19 31 494 2 477 6.25e-16 80.9
MS.gene95931.t1 MTR_8g104100 34.884 129 82 2 372 500 109 235 6.95e-16 78.2
MS.gene95931.t1 MTR_0171s0020 23.544 412 283 13 108 497 78 479 1.19e-15 80.1
MS.gene95931.t1 MTR_2g073480 25.862 232 149 6 278 494 158 381 1.23e-15 79.3
MS.gene95931.t1 MTR_1g037370 30.556 180 111 5 308 475 266 443 1.68e-15 79.7
MS.gene95931.t1 MTR_2g073420 28.444 225 138 8 278 487 253 469 1.69e-15 79.7
MS.gene95931.t1 MTR_8g042020 22.149 456 295 15 93 520 99 522 2.02e-15 79.3
MS.gene95931.t1 MTR_0171s0030 24.615 390 262 12 147 514 31 410 2.26e-15 78.6
MS.gene95931.t1 MTR_5g070920 29.167 168 115 3 349 516 327 490 3.37e-15 78.6
MS.gene95931.t1 MTR_1g101040 20.988 405 275 12 133 516 130 510 3.99e-15 78.6
MS.gene95931.t1 MTR_2g062670 36.686 169 93 5 192 347 56 223 4.71e-15 78.2
MS.gene95931.t1 MTR_2g062670 35.669 157 72 6 192 347 272 400 3.16e-12 69.3
MS.gene95931.t1 MTR_6g042540 24.131 518 313 20 35 500 3 492 5.36e-15 78.2
MS.gene95931.t1 MTR_5g026520 23.973 292 176 7 264 521 229 508 5.94e-15 77.8
MS.gene95931.t1 MTR_2g010330 29.787 188 120 5 338 521 328 507 6.69e-15 77.8
MS.gene95931.t1 MTR_4g031820 23.308 399 252 14 144 513 147 520 7.63e-15 77.4
MS.gene95931.t1 MTR_7g075610 26.923 156 101 3 341 496 331 473 8.18e-15 77.4
MS.gene95931.t1 MTR_3g467290 22.863 503 309 20 16 471 8 478 8.86e-15 77.4
MS.gene95931.t1 MTR_1g107300 30.469 128 87 2 371 498 49 174 9.95e-15 73.9
MS.gene95931.t1 MTR_5g095230 21.477 447 290 16 105 520 97 513 1.02e-14 77.0
MS.gene95931.t1 MTR_5g034900 29.255 188 121 5 337 521 339 517 1.10e-14 77.0
MS.gene95931.t1 MTR_6g008650 34.000 150 87 5 359 500 354 499 1.44e-14 76.6
MS.gene95931.t1 MTR_3g076560 22.398 442 274 15 112 517 96 504 1.66e-14 76.6
MS.gene95931.t1 MTR_8g098565 30.319 188 119 5 339 521 326 506 1.93e-14 76.3
MS.gene95931.t1 MTR_0171s0010 23.571 420 275 14 105 494 75 478 1.93e-14 76.3
MS.gene95931.t1 MTR_6g008530 25.514 243 158 8 269 492 257 495 2.29e-14 76.3
MS.gene95931.t1 MTR_6g042610 23.314 519 317 20 35 500 3 493 2.45e-14 75.9
MS.gene95931.t1 MTR_5g009110 25.828 302 192 11 145 421 1 295 2.53e-14 74.3
MS.gene95931.t1 MTR_5g056720 26.070 257 167 10 269 520 176 414 3.14e-14 75.1
MS.gene95931.t1 MTR_6g008640 25.182 274 176 10 250 500 230 497 3.71e-14 75.5
MS.gene95931.t1 MTR_2g072250 21.700 447 289 14 105 520 97 513 3.72e-14 75.5
MS.gene95931.t1 MTR_4g031820 23.575 386 245 13 144 513 147 498 3.86e-14 75.5
MS.gene95931.t1 MTR_8g080520 23.203 487 327 22 57 521 64 525 3.88e-14 75.5
MS.gene95931.t1 MTR_6g008500 29.771 131 88 3 363 492 374 501 4.66e-14 75.1
MS.gene95931.t1 MTR_1g055325 25.893 224 143 8 279 487 264 479 5.32e-14 74.7
MS.gene95931.t1 MTR_8g104030 24.895 237 157 7 269 487 8 241 5.33e-14 73.2
MS.gene95931.t1 MTR_1g085680 22.197 446 286 15 105 519 99 514 6.57e-14 74.7
MS.gene95931.t1 MTR_6g008430 23.735 257 169 6 263 500 244 492 8.61e-14 74.3
MS.gene95931.t1 MTR_8g042060 21.005 438 303 12 105 520 107 523 1.12e-13 73.9
MS.gene95931.t1 MTR_5g070690 27.128 188 123 4 349 526 326 509 1.23e-13 73.6
MS.gene95931.t1 MTR_5g070800 27.128 188 123 4 349 526 326 509 1.23e-13 73.6
MS.gene95931.t1 MTR_1g091010 23.444 482 314 16 44 497 11 465 1.33e-13 73.6
MS.gene95931.t1 MTR_5g094550 23.767 223 157 4 272 494 259 468 1.85e-13 73.2
MS.gene95931.t1 MTR_6g084900 29.333 150 92 4 339 487 92 228 2.62e-13 70.9
MS.gene95931.t1 MTR_6g084770 22.967 418 251 15 110 487 80 466 3.13e-13 72.4
MS.gene95931.t1 MTR_3g057910 23.297 279 191 8 260 523 225 495 3.37e-13 72.4
MS.gene95931.t1 MTR_8g042040 21.729 428 295 14 105 520 107 506 4.94e-13 72.0
MS.gene95931.t1 MTR_5g070830 24.812 266 175 9 269 516 343 601 5.62e-13 72.0
MS.gene95931.t1 MTR_3g014880 22.878 271 188 6 250 500 231 500 6.06e-13 71.6
MS.gene95931.t1 MTR_5g021390 25.514 243 151 8 269 487 238 474 6.79e-13 71.2
MS.gene95931.t1 MTR_7g098550 20.046 434 295 7 105 520 97 496 7.94e-13 71.2
MS.gene95931.t1 MTR_5g019010 22.366 465 304 18 57 491 31 468 8.56e-13 71.2
MS.gene95931.t1 MTR_2g010320 26.016 246 165 7 285 521 266 503 9.50e-13 70.9
MS.gene95931.t1 MTR_6g022450 23.711 291 192 9 256 528 238 516 1.07e-12 70.9
MS.gene95931.t1 MTR_2g450040 31.447 159 99 6 350 500 334 490 1.31e-12 70.5
MS.gene95931.t1 MTR_0022s0290 25.681 257 138 8 269 490 242 480 1.59e-12 70.1
MS.gene95931.t1 MTR_5g016440 23.077 390 234 15 124 487 102 451 1.63e-12 70.1
MS.gene95931.t1 MTR_3g436390 31.746 126 83 2 371 494 346 470 1.67e-12 70.1
MS.gene95931.t1 MTR_8g027040 24.436 266 171 8 275 521 291 545 1.69e-12 70.1
MS.gene95931.t1 MTR_7g075580 25.161 155 103 3 336 490 325 466 2.47e-12 69.7
MS.gene95931.t1 MTR_3g025260 21.073 261 157 7 262 491 229 471 2.54e-12 69.7
MS.gene95931.t1 MTR_1g091023 23.441 465 303 15 59 497 29 466 2.54e-12 69.7
MS.gene95931.t1 MTR_6g008600 24.000 250 152 5 269 492 256 493 2.65e-12 69.7
MS.gene95931.t1 MTR_1g090987 30.070 143 93 4 359 497 15 154 3.10e-12 65.5
MS.gene95931.t1 MTR_3g058220 22.727 418 258 17 112 494 82 469 3.16e-12 69.3
MS.gene95931.t1 MTR_8g063280 23.282 262 163 8 288 521 247 498 3.22e-12 69.3
MS.gene95931.t1 MTR_2g061910 40.244 82 49 0 112 193 72 153 3.79e-12 65.1
MS.gene95931.t1 MTR_3g024520 21.226 424 268 14 147 533 114 508 3.87e-12 68.9
MS.gene95931.t1 MTR_7g092620 23.661 448 276 14 108 514 75 497 3.90e-12 68.9
MS.gene95931.t1 MTR_5g070710 26.786 168 119 3 349 516 325 488 4.31e-12 68.9
MS.gene95931.t1 MTR_5g007450 26.429 140 97 3 359 494 328 465 5.09e-12 68.6
MS.gene95931.t1 MTR_7g098550 20.136 442 293 9 105 520 97 504 6.00e-12 68.6
MS.gene95931.t1 MTR_4g104570 28.758 153 96 3 339 491 26 165 6.20e-12 65.5
MS.gene95931.t1 MTR_2g010300 27.513 189 111 6 338 522 324 490 8.66e-12 67.8
MS.gene95931.t1 MTR_5g070700 23.356 441 271 15 112 516 82 491 9.55e-12 67.8
MS.gene95931.t1 MTR_8g012590 24.068 295 191 10 256 529 224 506 9.62e-12 67.8
MS.gene95931.t1 MTR_2g061760 34.653 101 63 2 181 279 1 100 1.09e-11 62.0
MS.gene95931.t1 MTR_4g018800 22.965 479 283 18 67 492 46 491 1.09e-11 67.8
MS.gene95931.t1 MTR_4g102280 26.289 194 127 5 338 528 336 516 1.11e-11 67.8
MS.gene95931.t1 MTR_1g031700 24.857 350 233 14 157 490 126 461 1.16e-11 67.4
MS.gene95931.t1 MTR_2g072310 23.762 303 201 10 240 520 56 350 1.25e-11 66.6
MS.gene95931.t1 MTR_5g070973 26.531 147 104 3 370 516 20 162 1.38e-11 63.9
MS.gene95931.t1 MTR_4g089030 21.053 513 324 20 25 494 11 485 1.63e-11 67.0
MS.gene95931.t1 MTR_5g073320 24.651 215 149 5 280 494 268 469 1.65e-11 67.0
MS.gene95931.t1 MTR_3g058110 21.975 405 279 12 112 494 84 473 1.66e-11 67.0
MS.gene95931.t1 MTR_5g070850 21.569 255 162 4 269 497 233 475 1.71e-11 67.0
MS.gene95931.t1 MTR_4g062500 30.000 130 86 3 372 498 357 484 1.83e-11 67.0
MS.gene95931.t1 MTR_8g020940 24.803 254 163 10 263 497 231 475 1.96e-11 66.6
MS.gene95931.t1 MTR_4g104550 22.760 413 268 11 106 490 67 456 2.38e-11 66.6
MS.gene95931.t1 MTR_5g470730 32.000 100 68 0 349 448 328 427 3.40e-11 65.9
MS.gene95931.t1 MTR_5g007460 25.714 140 98 3 359 494 307 444 3.51e-11 65.9
MS.gene95931.t1 MTR_8g042060 20.642 436 271 13 105 520 107 487 3.74e-11 65.9
MS.gene95931.t1 MTR_4g025970 22.164 379 227 11 149 490 114 461 4.17e-11 65.9
MS.gene95931.t1 MTR_8g012585 26.380 163 115 3 372 530 297 458 4.78e-11 65.5
MS.gene95931.t1 MTR_7g075390 24.632 272 179 8 269 519 236 502 5.13e-11 65.5
MS.gene95931.t1 MTR_6g008630 30.000 140 92 4 363 500 274 409 6.37e-11 65.1
MS.gene95931.t1 MTR_3g467200 28.205 234 130 10 263 471 253 473 6.42e-11 65.1
MS.gene95931.t1 MTR_4g048580 20.490 449 290 14 83 494 50 468 6.63e-11 65.1
MS.gene95931.t1 MTR_2g072380 23.381 278 184 9 264 520 81 350 8.28e-11 63.9
MS.gene95931.t1 MTR_4g104540 28.758 153 96 3 339 491 257 396 8.72e-11 64.3
MS.gene95931.t1 MTR_8g468780 22.768 448 279 14 108 514 7 428 8.96e-11 64.3
MS.gene95931.t1 MTR_1g023730 22.251 391 235 12 147 494 115 479 9.30e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95931.t1 AT5G23190 62.113 549 179 4 6 529 4 548 0.0 697
MS.gene95931.t1 AT5G08250 60.940 553 176 7 7 529 6 548 0.0 686
MS.gene95931.t1 AT5G08250 63.692 493 139 7 67 529 4 486 0.0 642
MS.gene95931.t1 AT1G24540 42.125 527 263 8 27 521 4 520 4.60e-149 438
MS.gene95931.t1 AT3G26125 42.510 494 245 7 66 525 48 536 6.49e-139 412
MS.gene95931.t1 AT1G13140 39.703 539 284 10 18 527 5 531 1.68e-136 406
MS.gene95931.t1 AT1G13140 40.625 512 291 9 18 527 5 505 1.99e-132 395
MS.gene95931.t1 AT1G63710 42.829 509 251 9 43 521 9 507 3.83e-132 394
MS.gene95931.t1 AT1G13150 41.057 492 255 7 62 525 37 521 3.89e-131 392
MS.gene95931.t1 AT1G01600 41.617 507 258 8 58 532 24 524 2.82e-126 380
MS.gene95931.t1 AT4G00360 40.873 504 260 9 58 530 24 520 3.14e-123 373
MS.gene95931.t1 AT2G45970 41.420 507 264 11 43 521 9 510 3.06e-122 370
MS.gene95931.t1 AT5G58860 39.729 516 257 8 44 523 13 510 1.15e-120 365
MS.gene95931.t1 AT4G39490 38.104 517 285 8 38 522 4 517 2.29e-119 362
MS.gene95931.t1 AT2G23180 37.428 521 281 9 38 523 4 514 9.79e-116 352
MS.gene95931.t1 AT2G21910 36.166 506 298 9 38 521 4 506 2.99e-107 330
MS.gene95931.t1 AT4G39480 37.911 517 283 10 38 522 4 514 5.48e-107 330
MS.gene95931.t1 AT5G52320 34.719 481 296 8 55 520 24 501 1.14e-104 323
MS.gene95931.t1 AT1G57750 36.192 478 286 8 59 522 25 497 1.17e-104 323
MS.gene95931.t1 AT5G52320 34.874 476 292 8 55 515 24 496 1.61e-103 320
MS.gene95931.t1 AT1G69500 37.406 532 269 13 43 522 5 524 8.55e-103 319
MS.gene95931.t1 AT1G34540 38.866 494 251 12 58 521 25 497 7.47e-102 316
MS.gene95931.t1 AT4G32170 33.730 504 312 8 38 522 4 504 1.51e-101 315
MS.gene95931.t1 AT1G65340 33.898 472 294 7 64 520 34 502 2.24e-101 315
MS.gene95931.t1 AT1G47620 33.402 485 284 7 66 522 43 516 7.66e-101 314
MS.gene95931.t1 AT3G56630 38.833 497 250 15 57 521 24 498 1.39e-100 313
MS.gene95931.t1 AT4G39500 33.988 509 311 10 36 522 12 517 1.77e-98 308
MS.gene95931.t1 AT4G39510 33.069 505 316 8 38 522 4 506 8.27e-97 303
MS.gene95931.t1 AT5G63450 40.878 433 225 9 112 523 84 506 5.88e-96 301
MS.gene95931.t1 AT5G63450 40.878 433 225 9 112 523 142 564 2.40e-95 301
MS.gene95931.t1 AT3G48520 40.000 445 223 9 104 522 74 500 7.71e-93 293
MS.gene95931.t1 AT2G45510 36.128 501 279 12 41 514 15 501 1.97e-92 292
MS.gene95931.t1 AT4G39500 34.043 470 288 8 72 522 1 467 1.08e-91 288
MS.gene95931.t1 AT2G44890 38.739 444 233 10 98 514 70 501 3.61e-89 283
MS.gene95931.t1 AT2G27690 36.712 444 228 8 109 521 73 494 1.48e-85 273
MS.gene95931.t1 AT2G44890 37.387 444 221 11 98 514 70 483 1.10e-81 263
MS.gene95931.t1 AT5G02900 31.660 518 282 12 37 522 3 480 2.59e-79 257
MS.gene95931.t1 AT1G57750 32.861 423 265 8 48 456 14 431 1.09e-78 254
MS.gene95931.t1 AT3G01900 32.577 485 294 12 54 521 22 490 1.45e-76 250
MS.gene95931.t1 AT1G31800 24.161 447 303 16 96 522 140 570 1.29e-29 123
MS.gene95931.t1 AT4G15110 24.242 462 293 17 112 522 124 579 4.75e-24 106
MS.gene95931.t1 AT3G53130 23.502 434 296 15 110 521 120 539 1.39e-22 101
MS.gene95931.t1 AT4G13290 24.518 363 240 10 147 494 115 458 3.88e-19 90.9
MS.gene95931.t1 AT4G13310 24.317 366 245 10 147 494 114 465 1.44e-18 89.0
MS.gene95931.t1 AT1G66030 29.940 167 98 4 38 194 4 161 5.89e-18 82.0
MS.gene95931.t1 AT2G26710 24.113 423 271 16 130 525 120 519 1.12e-17 86.7
MS.gene95931.t1 AT3G48270 23.039 408 266 11 106 490 70 452 1.28e-17 86.3
MS.gene95931.t1 AT1G33730 27.344 256 149 7 263 494 97 339 1.53e-17 84.7
MS.gene95931.t1 AT1G33730 27.344 256 149 7 263 494 97 339 1.53e-17 84.7
MS.gene95931.t1 AT3G48310 22.353 425 264 15 106 498 71 461 5.52e-17 84.3
MS.gene95931.t1 AT3G48300 22.090 421 268 13 106 497 68 457 6.14e-17 84.0
MS.gene95931.t1 AT3G48300 22.090 421 268 13 106 497 70 459 6.19e-17 84.0
MS.gene95931.t1 AT1G64930 28.495 186 118 4 334 515 328 502 6.85e-17 84.0
MS.gene95931.t1 AT4G12300 25.882 255 166 8 260 498 236 483 9.85e-17 83.6
MS.gene95931.t1 AT2G45570 23.358 411 282 13 106 494 77 476 1.19e-16 83.2
MS.gene95931.t1 AT5G38450 28.261 184 116 3 336 519 347 514 4.13e-16 81.6
MS.gene95931.t1 AT2G30770 22.986 422 263 16 106 494 72 464 4.70e-16 81.3
MS.gene95931.t1 AT1G64940 27.568 185 121 4 334 516 330 503 7.46e-16 80.9
MS.gene95931.t1 AT3G48280 22.778 360 241 8 154 496 119 458 1.04e-15 80.1
MS.gene95931.t1 AT1G33720 26.953 256 150 8 263 494 233 475 1.45e-15 79.7
MS.gene95931.t1 AT1G33720 26.953 256 150 8 263 494 101 343 1.48e-15 79.0
MS.gene95931.t1 AT1G33720 26.953 256 150 8 263 494 101 343 1.48e-15 79.0
MS.gene95931.t1 AT1G33720 26.953 256 150 8 263 494 101 343 1.48e-15 79.0
MS.gene95931.t1 AT3G14620 21.963 428 292 13 105 513 103 507 2.28e-15 79.3
MS.gene95931.t1 AT3G48290 22.414 406 271 9 106 490 72 454 3.42e-15 78.6
MS.gene95931.t1 AT1G67110 26.627 169 116 3 354 519 345 508 4.09e-15 78.6
MS.gene95931.t1 AT2G42250 27.570 214 135 4 294 500 287 487 9.96e-15 77.4
MS.gene95931.t1 AT4G37370 22.343 367 225 12 149 487 117 451 1.22e-14 77.0
MS.gene95931.t1 AT1G64950 26.071 280 178 9 264 516 225 502 1.23e-14 77.0
MS.gene95931.t1 AT2G46950 22.248 436 261 15 121 518 172 567 1.63e-14 76.6
MS.gene95931.t1 AT4G12320 24.409 254 172 7 261 498 236 485 1.77e-14 76.6
MS.gene95931.t1 AT4G39950 22.182 559 315 21 7 497 39 545 3.58e-14 75.9
MS.gene95931.t1 AT5G25120 21.357 501 308 19 40 497 7 464 5.36e-14 74.7
MS.gene95931.t1 AT5G07990 24.082 245 146 9 269 487 233 463 5.70e-14 74.7
MS.gene95931.t1 AT1G01190 25.475 263 172 8 266 521 291 536 6.17e-14 74.7
MS.gene95931.t1 AT5G25180 20.316 443 262 15 106 500 68 467 6.34e-14 74.7
MS.gene95931.t1 AT4G12310 24.303 251 170 7 264 498 241 487 6.80e-14 74.7
MS.gene95931.t1 AT4G39950 25.292 257 146 7 269 497 267 505 7.78e-14 74.7
MS.gene95931.t1 AT1G01190 25.475 263 172 8 266 521 286 531 7.88e-14 74.3
MS.gene95931.t1 AT2G22330 24.561 285 183 10 269 531 292 566 1.68e-13 73.6
MS.gene95931.t1 AT2G22330 24.561 285 183 10 269 531 269 543 1.75e-13 73.6
MS.gene95931.t1 AT2G45550 27.673 159 102 3 336 494 330 475 1.97e-13 73.2
MS.gene95931.t1 AT5G24950 28.986 138 97 1 354 491 325 461 2.92e-13 72.4
MS.gene95931.t1 AT5G25140 21.513 423 263 14 112 497 74 464 3.97e-13 72.0
MS.gene95931.t1 AT3G48290 21.281 437 264 11 106 490 72 480 4.26e-13 72.0
MS.gene95931.t1 AT3G25180 26.966 178 122 4 359 530 340 515 4.87e-13 72.0
MS.gene95931.t1 AT2G45560 31.452 124 83 2 371 494 354 475 8.27e-13 71.2
MS.gene95931.t1 AT1G64900 30.719 153 100 4 375 522 354 505 8.38e-13 71.2
MS.gene95931.t1 AT2G46660 25.510 196 128 6 332 521 345 528 8.67e-13 71.2
MS.gene95931.t1 AT2G12190 28.916 166 113 3 355 516 340 504 9.86e-13 70.9
MS.gene95931.t1 AT5G24910 21.190 420 277 12 133 521 136 532 1.11e-12 70.9
MS.gene95931.t1 AT5G06900 26.538 260 145 10 260 494 227 465 1.12e-12 70.9
MS.gene95931.t1 AT4G31950 25.283 265 165 11 269 507 236 493 1.19e-12 70.9
MS.gene95931.t1 AT1G79370 25.137 366 226 14 149 475 127 483 1.28e-12 70.9
MS.gene95931.t1 AT2G27000 23.098 368 219 15 192 522 167 507 1.37e-12 70.5
MS.gene95931.t1 AT5G25130 20.979 429 270 13 106 497 68 464 1.44e-12 70.5
MS.gene95931.t1 AT1G12740 27.444 266 170 9 261 523 227 472 1.77e-12 70.1
MS.gene95931.t1 AT1G33720 27.329 161 104 3 334 494 221 368 1.95e-12 69.7
MS.gene95931.t1 AT1G12740 27.444 266 170 9 261 523 233 478 2.01e-12 69.7
MS.gene95931.t1 AT3G48320 21.343 417 266 13 111 497 76 460 2.97e-12 69.3
MS.gene95931.t1 AT4G22690 23.488 281 191 8 264 527 282 555 3.28e-12 69.3
MS.gene95931.t1 AT1G16410 22.547 479 296 16 63 494 48 498 3.43e-12 69.3
MS.gene95931.t1 AT1G13080 25.260 384 216 16 147 490 113 465 3.64e-12 69.3
MS.gene95931.t1 AT4G20240 23.288 365 230 12 106 443 72 413 4.53e-12 68.6
MS.gene95931.t1 AT1G11610 20.673 416 272 12 106 490 72 460 6.41e-12 68.6
MS.gene95931.t1 AT5G24900 26.316 152 104 3 370 518 261 407 6.55e-12 67.8
MS.gene95931.t1 AT4G22710 23.488 281 191 8 264 527 251 524 6.70e-12 68.6
MS.gene95931.t1 AT1G11610 20.673 416 272 12 106 490 72 460 6.83e-12 68.2
MS.gene95931.t1 AT4G13770 29.839 124 86 1 371 494 345 467 7.35e-12 68.2
MS.gene95931.t1 AT4G31970 23.320 253 167 10 269 500 247 493 1.81e-11 67.0
MS.gene95931.t1 AT3G28740 21.526 367 228 13 149 487 126 460 1.98e-11 67.0
MS.gene95931.t1 AT2G25160 26.437 261 158 11 240 477 221 470 2.41e-11 66.6
MS.gene95931.t1 AT3G26830 22.000 350 217 11 154 471 117 442 3.76e-11 65.9
MS.gene95931.t1 AT4G15330 29.091 220 134 7 264 476 251 455 4.95e-11 65.5
MS.gene95931.t1 AT5G04330 23.849 239 158 6 269 487 231 465 5.54e-11 65.5
MS.gene95931.t1 AT4G36220 28.387 155 103 4 339 487 324 476 5.57e-11 65.5
MS.gene95931.t1 AT4G15330 29.091 220 134 7 264 476 223 427 7.07e-11 65.1
MS.gene95931.t1 AT4G31940 22.648 287 194 10 263 526 241 522 8.32e-11 65.1
MS.gene95931.t1 AT1G12740 26.199 271 173 9 261 523 227 478 9.72e-11 64.7

Find 99 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATTCACTGCATTTAA+TGG 0.147857 1.3:+21276871 MS.gene95931:CDS
TCTTTAGTTAACCATCTTTC+TGG 0.171882 1.3:-21276823 None:intergenic
CAATAATGATTTCTATGATT+TGG 0.221252 1.3:-21274815 None:intergenic
ATTAAATGCAGTGAATTTAT+AGG 0.231081 1.3:-21276869 None:intergenic
GCTCTTGCAAAAGGTATTTC+AGG 0.272239 1.3:-21275401 None:intergenic
TTGATGAATGTTTGAGATTT+GGG 0.278058 1.3:+21275858 MS.gene95931:CDS
AATTTGCTGATAGTGTTATA+AGG 0.296272 1.3:+21275549 MS.gene95931:CDS
AATTTCTTTGGAACATGATA+TGG 0.298513 1.3:+21275586 MS.gene95931:CDS
AAGAAAGAAGGAAATTTCTT+TGG 0.299457 1.3:+21275574 MS.gene95931:CDS
TGAAAATGTGAGGTTGAAAT+TGG 0.302144 1.3:-21274721 None:intergenic
TTTGATGAATGTTTGAGATT+TGG 0.309076 1.3:+21275857 MS.gene95931:CDS
AAAGAAAGCTTAGGAACAAT+AGG 0.317508 1.3:-21276997 None:intergenic
GATACACTTAAACATCAAAA+TGG 0.321074 1.3:+21274969 MS.gene95931:CDS
CTAACCAATTGGCCTGTCTT+TGG 0.325235 1.3:+21274891 MS.gene95931:CDS
TCTTTGAAGAAGTTTCCTTT+AGG 0.328907 1.3:-21275095 None:intergenic
AGTTTCATTCAACAAAGTTT+AGG 0.332565 1.3:+21275201 MS.gene95931:CDS
GGTTAGGCCATGATGTTTCT+TGG 0.338321 1.3:-21274874 None:intergenic
AAATATTAGAAGAGATTTGC+AGG 0.338808 1.3:+21275798 MS.gene95931:CDS
TAAATGAAGTTGCAAACAAC+AGG 0.338916 1.3:-21275378 None:intergenic
TGTTTGAGCTTGTGAACAAT+AGG 0.347696 1.3:+21275243 MS.gene95931:CDS
CTTTGAAGAAGTTTCCTTTA+GGG 0.351456 1.3:-21275094 None:intergenic
CATATTTCGTTACCATGTTA+AGG 0.358133 1.3:+21276960 MS.gene95931:CDS
ATTATATCCTTCTGTTCCTA+TGG 0.369772 1.3:+21275937 MS.gene95931:CDS
TGGGAAGAATGGAAAACATA+TGG 0.389219 1.3:+21276776 MS.gene95931:CDS
GATATATGCAATATATTCAA+TGG 0.392509 1.3:+21276756 MS.gene95931:CDS
GAAATTGGAAGTGTTAGTTT+TGG 0.406284 1.3:-21274706 None:intergenic
AGAAGATGTTCTAAATTATG+AGG 0.409229 1.3:-21275050 None:intergenic
GTCAGAGGAGATTAAGAAGA+TGG 0.410727 1.3:+21275880 MS.gene95931:CDS
AGATTCATCGTTGAAGAAAT+CGG 0.411921 1.3:+21275280 MS.gene95931:CDS
GACACAGTTTCTGATTTACT+TGG 0.417057 1.3:+21275116 MS.gene95931:CDS
ATGCTACCTTCCTTAATCAT+AGG 0.418783 1.3:+21274915 MS.gene95931:CDS
AATGGAACCTTTAGATTCAA+AGG 0.428940 1.3:+21274987 MS.gene95931:CDS
TTGTCGCGCCAGTTTGTGTA+TGG 0.430201 1.3:+21275459 MS.gene95931:CDS
CAAAGACAGGCCAATTGGTT+AGG 0.430962 1.3:-21274890 None:intergenic
GAGGTTTCTTAACTTAGGTA+TGG 0.436495 1.3:+21275490 MS.gene95931:CDS
CATTCCAAAGACAGGCCAAT+TGG 0.440500 1.3:-21274895 None:intergenic
ATTTGTTAACCGTGTTTATG+AGG 0.441978 1.3:+21275630 MS.gene95931:CDS
ATTTGCTGATAGTGTTATAA+GGG 0.444302 1.3:+21275550 MS.gene95931:CDS
TTCAACGATGAATCTAATAC+AGG 0.448100 1.3:-21275272 None:intergenic
CCATGGCCCTTTGAATCTAA+AGG 0.451528 1.3:-21274994 None:intergenic
AACATCATGGCCTAACCAAT+TGG 0.451675 1.3:+21274880 MS.gene95931:CDS
GGAAGATGATAAGCGAAAAT+CGG 0.459877 1.3:+21275607 MS.gene95931:CDS
ATAGCCTTCCATACACAAAC+TGG 0.469665 1.3:-21275467 None:intergenic
AATATATTCAATGGGAAGAA+TGG 0.472062 1.3:+21276765 MS.gene95931:CDS
GCTATGAGGTTTCTTAACTT+AGG 0.480283 1.3:+21275485 MS.gene95931:CDS
ATGAGGCTTAAAGATGAGAA+TGG 0.481356 1.3:+21275647 MS.gene95931:CDS
ATTACCTCTTTATGATCCAT+AGG 0.481913 1.3:-21275953 None:intergenic
GAAAGATGGTTAACTAAAGA+TGG 0.486051 1.3:+21276826 MS.gene95931:CDS
TGTTATAAGGGCAAGAAAGA+AGG 0.486158 1.3:+21275562 MS.gene95931:CDS
GGGAAGAATGGAAAACATAT+GGG 0.488104 1.3:+21276777 MS.gene95931:CDS
TAAAGTGTCAAAGAAAGCTT+AGG 0.491827 1.3:-21277006 None:intergenic
TCTTCAAAAGCTCTTGCAAA+AGG 0.493073 1.3:-21275410 None:intergenic
AGGTATGGAGAGAAAGTTGA+AGG 0.495061 1.3:+21275505 MS.gene95931:CDS
CAAAATATCTTGAAGATCGA+TGG 0.496051 1.3:-21275306 None:intergenic
ATGGAACCTTTAGATTCAAA+GGG 0.498830 1.3:+21274988 MS.gene95931:CDS
TATGGCTGCAACCATGTTGG+AGG 0.505689 1.3:-21274751 None:intergenic
ACTAAAGATGGTCATTTCAT+CGG 0.523408 1.3:+21276838 MS.gene95931:CDS
CGCGCCAGTTTGTGTATGGA+AGG 0.527833 1.3:+21275463 MS.gene95931:CDS
TAGAGTTCAAGCCAGAAAGA+TGG 0.532275 1.3:+21276812 MS.gene95931:CDS
CTCAAAACCAACATGTATGA+AGG 0.534949 1.3:+21274939 MS.gene95931:CDS
CCTTTAGATTCAAAGGGCCA+TGG 0.535114 1.3:+21274994 MS.gene95931:CDS
GGTTATGCCTTCATACATGT+TGG 0.535174 1.3:-21274946 None:intergenic
GGAGGACCAAGGTTGTGTTT+AGG 0.536485 1.3:+21276892 MS.gene95931:CDS
TTTGCAGGGTTGTGAGTCAG+AGG 0.537794 1.3:+21275813 MS.gene95931:CDS
ATATATGCAATATATTCAAT+GGG 0.541051 1.3:+21276757 MS.gene95931:CDS
ATGTTTGAGATTTGGGTCAG+AGG 0.542775 1.3:+21275865 MS.gene95931:CDS
AAGAAAGCTTAGGAACAATA+GGG 0.544624 1.3:-21276996 None:intergenic
AATATTAGAAGAGATTTGCA+GGG 0.547974 1.3:+21275799 MS.gene95931:CDS
TTCTATGGCTGCAACCATGT+TGG 0.548713 1.3:-21274754 None:intergenic
TGTTCCTATGGATCATAAAG+AGG 0.552892 1.3:+21275949 MS.gene95931:CDS
ATGATGTTTCTTGGAGTGCA+AGG 0.557000 1.3:-21274865 None:intergenic
TTGACACTTTACATGAAACA+TGG 0.567667 1.3:+21277018 MS.gene95931:CDS
TTTGTGTATGGAAGGCTATG+AGG 0.568077 1.3:+21275471 MS.gene95931:CDS
TTCTAAATTATGAGGTTCTG+AGG 0.570528 1.3:-21275042 None:intergenic
TCTTTGCCTAAACACAACCT+TGG 0.572132 1.3:-21276898 None:intergenic
TGATCAGAATCATGAAGTTG+AGG 0.573405 1.3:+21275772 MS.gene95931:intron
GTTTCTGATTTACTTGGAGA+CGG 0.575619 1.3:+21275122 MS.gene95931:CDS
GAAGGTAGCATTCCAAAGAC+AGG 0.578261 1.3:-21274903 None:intergenic
TTGCACTCCAAGAAACATCA+TGG 0.579240 1.3:+21274867 MS.gene95931:CDS
TTGAGTCCTATGATTAAGGA+AGG 0.580121 1.3:-21274921 None:intergenic
TTATGATCCATAGGAACAGA+AGG 0.580766 1.3:-21275944 None:intergenic
GATTGAAAGTTAATCTTCGT+AGG 0.584049 1.3:+21277040 MS.gene95931:CDS
ATCTTTAAGCCTCATAAACA+CGG 0.587397 1.3:-21275639 None:intergenic
AAATTCACTGCATTTAATGG+AGG 0.600051 1.3:+21276874 MS.gene95931:CDS
TCAGAGGGAGGATATCAAGA+AGG 0.601261 1.3:+21275829 MS.gene95931:CDS
ACGAAACATGGCAGAAACAA+AGG 0.603675 1.3:+21275162 MS.gene95931:CDS
TTGCAGGGTTGTGAGTCAGA+GGG 0.611805 1.3:+21275814 MS.gene95931:CDS
GAGGGAGGATATCAAGAAGG+AGG 0.630139 1.3:+21275832 MS.gene95931:CDS
TTCATGCTACACCTCCAACA+TGG 0.633303 1.3:+21274740 MS.gene95931:CDS
GGAAGAATGGAAAACATATG+GGG 0.633456 1.3:+21276778 MS.gene95931:CDS
CAGGGTTGTGAGTCAGAGGG+AGG 0.641550 1.3:+21275817 MS.gene95931:CDS
TCGCTGTAGATAACGAAACA+TGG 0.643347 1.3:+21275150 MS.gene95931:CDS
GAAGATGACACATTCCCAGA+TGG 0.647740 1.3:+21276706 MS.gene95931:CDS
CTGCATTTAATGGAGGACCA+AGG 0.651426 1.3:+21276881 MS.gene95931:CDS
GATTCTCAACAACCTTAACA+TGG 0.663167 1.3:-21276972 None:intergenic
AAATGAAGTTGCAAACAACA+GGG 0.666153 1.3:-21275377 None:intergenic
ATGAATGATTATGAAGACAA+TGG 0.666821 1.3:-21274841 None:intergenic
CAATTGAAACTAGTGAACCA+TGG 0.673397 1.3:-21275011 None:intergenic
AGGTGTAGCATGAAAATGTG+AGG 0.742376 1.3:-21274731 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAAAGTTTAATTTGATT+TGG + chr1.3:21275973-21275992 MS.gene95931:intron 10.0%
!!! ATTTATTTTTATTTTTCATC+AGG + chr1.3:21276678-21276697 MS.gene95931:intron 10.0%
!! ATATATGCAATATATTCAAT+GGG + chr1.3:21276757-21276776 MS.gene95931:CDS 15.0%
!!! TCTTTTCTAACAATATTATT+AGG - chr1.3:21276535-21276554 None:intergenic 15.0%
!! AAAACTATTCACAAAATTCA+AGG + chr1.3:21276460-21276479 MS.gene95931:intron 20.0%
!! ATTAAATGCAGTGAATTTAT+AGG - chr1.3:21276872-21276891 None:intergenic 20.0%
!! CAATAATGATTTCTATGATT+TGG - chr1.3:21274818-21274837 None:intergenic 20.0%
!! GATATATGCAATATATTCAA+TGG + chr1.3:21276756-21276775 MS.gene95931:CDS 20.0%
!! TATAAATTCACTGCATTTAA+TGG + chr1.3:21276871-21276890 MS.gene95931:CDS 20.0%
!! TCTGAATAAAAAAATCTCTT+TGG + chr1.3:21276398-21276417 MS.gene95931:intron 20.0%
!!! ATTATTCAGATAAGTTTTTG+AGG + chr1.3:21275675-21275694 MS.gene95931:CDS 20.0%
!!! ATTTTGATGTTTAAGTGTAT+CGG - chr1.3:21274970-21274989 None:intergenic 20.0%
!!! TATTTTTATTTTTCATCAGG+TGG + chr1.3:21276681-21276700 MS.gene95931:intron 20.0%
!!! TTATTCAGATAAGTTTTTGA+GGG + chr1.3:21275676-21275695 MS.gene95931:CDS 20.0%
!!! TTATTGATTGAAGTTCATAT+TGG + chr1.3:21276654-21276673 MS.gene95931:intron 20.0%
! AAATATTAGAAGAGATTTGC+AGG + chr1.3:21275798-21275817 MS.gene95931:CDS 25.0%
! AAGAAAGAAGGAAATTTCTT+TGG + chr1.3:21275574-21275593 MS.gene95931:CDS 25.0%
! AATATATTCAATGGGAAGAA+TGG + chr1.3:21276765-21276784 MS.gene95931:CDS 25.0%
! AATATTAGAAGAGATTTGCA+GGG + chr1.3:21275799-21275818 MS.gene95931:CDS 25.0%
! AGTTTCATTCAACAAAGTTT+AGG + chr1.3:21275201-21275220 MS.gene95931:CDS 25.0%
! ATGAATGATTATGAAGACAA+TGG - chr1.3:21274844-21274863 None:intergenic 25.0%
! GATACACTTAAACATCAAAA+TGG + chr1.3:21274969-21274988 MS.gene95931:CDS 25.0%
! GATGGAACAAAACTAAAAAA+AGG + chr1.3:21276724-21276743 MS.gene95931:CDS 25.0%
!! AGAAGATGTTCTAAATTATG+AGG - chr1.3:21275053-21275072 None:intergenic 25.0%
!! ATTTGCTGATAGTGTTATAA+GGG + chr1.3:21275550-21275569 MS.gene95931:CDS 25.0%
!! TGTAAAGTAAAGAGTCATTT+TGG + chr1.3:21276067-21276086 MS.gene95931:intron 25.0%
!! TTGATGAATGTTTGAGATTT+GGG + chr1.3:21275858-21275877 MS.gene95931:CDS 25.0%
!! TTTGATGAATGTTTGAGATT+TGG + chr1.3:21275857-21275876 MS.gene95931:CDS 25.0%
!!! AATTTCTTTGGAACATGATA+TGG + chr1.3:21275586-21275605 MS.gene95931:CDS 25.0%
!!! AATTTGCTGATAGTGTTATA+AGG + chr1.3:21275549-21275568 MS.gene95931:CDS 25.0%
!!! GTCATTTTAGTCCATATATA+CGG - chr1.3:21276297-21276316 None:intergenic 25.0%
!!! GTGTAAGTTTTATATTAGCT+GGG + chr1.3:21275705-21275724 MS.gene95931:intron 25.0%
!!! TCATTTTAGTCCATATATAC+GGG - chr1.3:21276296-21276315 None:intergenic 25.0%
!!! TGTGTAAGTTTTATATTAGC+TGG + chr1.3:21275704-21275723 MS.gene95931:intron 25.0%
!!! TTTTGGTTTATAAATGTGTG+AGG + chr1.3:21276084-21276103 MS.gene95931:intron 25.0%
!!! TTTTTAGTTTTGTTCCATCT+GGG - chr1.3:21276723-21276742 None:intergenic 25.0%
!!! TTTTTTAGTTTTGTTCCATC+TGG - chr1.3:21276724-21276743 None:intergenic 25.0%
AAAGAAAGCTTAGGAACAAT+AGG - chr1.3:21277000-21277019 None:intergenic 30.0%
AAATGAAGTTGCAAACAACA+GGG - chr1.3:21275380-21275399 None:intergenic 30.0%
AAATTCACTGCATTTAATGG+AGG + chr1.3:21276874-21276893 MS.gene95931:CDS 30.0%
AAGAAAGCTTAGGAACAATA+GGG - chr1.3:21276999-21277018 None:intergenic 30.0%
AATGGAACCTTTAGATTCAA+AGG + chr1.3:21274987-21275006 MS.gene95931:CDS 30.0%
ACTAAAGATGGTCATTTCAT+CGG + chr1.3:21276838-21276857 MS.gene95931:CDS 30.0%
AGATTCATCGTTGAAGAAAT+CGG + chr1.3:21275280-21275299 MS.gene95931:CDS 30.0%
ATCTTTAAGCCTCATAAACA+CGG - chr1.3:21275642-21275661 None:intergenic 30.0%
ATGGAACCTTTAGATTCAAA+GGG + chr1.3:21274988-21275007 MS.gene95931:CDS 30.0%
ATTACCTCTTTATGATCCAT+AGG - chr1.3:21275956-21275975 None:intergenic 30.0%
ATTATATCCTTCTGTTCCTA+TGG + chr1.3:21275937-21275956 MS.gene95931:CDS 30.0%
CAAAATATCTTGAAGATCGA+TGG - chr1.3:21275309-21275328 None:intergenic 30.0%
CATATTTCGTTACCATGTTA+AGG + chr1.3:21276960-21276979 MS.gene95931:CDS 30.0%
GAAAGATGGTTAACTAAAGA+TGG + chr1.3:21276826-21276845 MS.gene95931:CDS 30.0%
GATTGAAAGTTAATCTTCGT+AGG + chr1.3:21277040-21277059 MS.gene95931:CDS 30.0%
GGAATAAACTCTCTTATAGT+AGG + chr1.3:21276419-21276438 MS.gene95931:intron 30.0%
TAAATGAAGTTGCAAACAAC+AGG - chr1.3:21275381-21275400 None:intergenic 30.0%
TCTTTAGTTAACCATCTTTC+TGG - chr1.3:21276826-21276845 None:intergenic 30.0%
TGAAAATGTGAGGTTGAAAT+TGG - chr1.3:21274724-21274743 None:intergenic 30.0%
TTCAACGATGAATCTAATAC+AGG - chr1.3:21275275-21275294 None:intergenic 30.0%
TTCTAAATTATGAGGTTCTG+AGG - chr1.3:21275045-21275064 None:intergenic 30.0%
TTGACACTTTACATGAAACA+TGG + chr1.3:21277018-21277037 MS.gene95931:CDS 30.0%
! AAGTTCACTATTTTCCCTAA+AGG + chr1.3:21275080-21275099 MS.gene95931:CDS 30.0%
! ATTTGTTAACCGTGTTTATG+AGG + chr1.3:21275630-21275649 MS.gene95931:CDS 30.0%
! CTTTGAAGAAGTTTCCTTTA+GGG - chr1.3:21275097-21275116 None:intergenic 30.0%
! GTGAGAAAACAAGTTTTCTA+TGG - chr1.3:21274772-21274791 None:intergenic 30.0%
! TAAAGTGTCAAAGAAAGCTT+AGG - chr1.3:21277009-21277028 None:intergenic 30.0%
! TCTTTGAAGAAGTTTCCTTT+AGG - chr1.3:21275098-21275117 None:intergenic 30.0%
!! ATGTCTTGGTTAGTTACTTT+TGG + chr1.3:21276209-21276228 MS.gene95931:intron 30.0%
!! ATGTGTTATGTTGGTTTGTT+TGG + chr1.3:21276179-21276198 MS.gene95931:intron 30.0%
!!! GAAATTGGAAGTGTTAGTTT+TGG - chr1.3:21274709-21274728 None:intergenic 30.0%
!!! TTGCTTTGAGTTGGTTTTTT+TGG + chr1.3:21275744-21275763 MS.gene95931:intron 30.0%
!!! TTTGAGTTGGTTTTTTTGGT+TGG + chr1.3:21275748-21275767 MS.gene95931:intron 30.0%
!!! TTTTATTTTTCATCAGGTGG+TGG + chr1.3:21276684-21276703 MS.gene95931:intron 30.0%
AATTCGCCCCTAAAATTGTA+GGG - chr1.3:21276501-21276520 None:intergenic 35.0%
ATGAGGCTTAAAGATGAGAA+TGG + chr1.3:21275647-21275666 MS.gene95931:CDS 35.0%
ATGCTACCTTCCTTAATCAT+AGG + chr1.3:21274915-21274934 MS.gene95931:CDS 35.0%
CAATTGAAACTAGTGAACCA+TGG - chr1.3:21275014-21275033 None:intergenic 35.0%
CTCAAAACCAACATGTATGA+AGG + chr1.3:21274939-21274958 MS.gene95931:CDS 35.0%
GACACAGTTTCTGATTTACT+TGG + chr1.3:21275116-21275135 MS.gene95931:CDS 35.0%
GAGGTTTCTTAACTTAGGTA+TGG + chr1.3:21275490-21275509 MS.gene95931:CDS 35.0%
GATTCTCAACAACCTTAACA+TGG - chr1.3:21276975-21276994 None:intergenic 35.0%
GATTCTCGAATGTGTTATGT+TGG + chr1.3:21276170-21276189 MS.gene95931:intron 35.0%
GCTATGAGGTTTCTTAACTT+AGG + chr1.3:21275485-21275504 MS.gene95931:CDS 35.0%
GGAAGAATGGAAAACATATG+GGG + chr1.3:21276778-21276797 MS.gene95931:CDS 35.0%
GGAAGATGATAAGCGAAAAT+CGG + chr1.3:21275607-21275626 MS.gene95931:CDS 35.0%
GGGAAGAATGGAAAACATAT+GGG + chr1.3:21276777-21276796 MS.gene95931:CDS 35.0%
GTAACTAACCAAGACATTGT+TGG - chr1.3:21276206-21276225 None:intergenic 35.0%
GTTTCTGATTTACTTGGAGA+CGG + chr1.3:21275122-21275141 MS.gene95931:CDS 35.0%
TCGATTAATGTGCTTCAAGT+GGG + chr1.3:21276324-21276343 MS.gene95931:intron 35.0%
TCTTCAAAAGCTCTTGCAAA+AGG - chr1.3:21275413-21275432 None:intergenic 35.0%
TGATCAGAATCATGAAGTTG+AGG + chr1.3:21275772-21275791 MS.gene95931:intron 35.0%
TGGGAAGAATGGAAAACATA+TGG + chr1.3:21276776-21276795 MS.gene95931:CDS 35.0%
TGTTATAAGGGCAAGAAAGA+AGG + chr1.3:21275562-21275581 MS.gene95931:CDS 35.0%
TGTTCCTATGGATCATAAAG+AGG + chr1.3:21275949-21275968 MS.gene95931:CDS 35.0%
TGTTTGAGCTTGTGAACAAT+AGG + chr1.3:21275243-21275262 MS.gene95931:CDS 35.0%
TTATGATCCATAGGAACAGA+AGG - chr1.3:21275947-21275966 None:intergenic 35.0%
TTGAGTCCTATGATTAAGGA+AGG - chr1.3:21274924-21274943 None:intergenic 35.0%
! TTTTAGTCCATATATACGGG+AGG - chr1.3:21276293-21276312 None:intergenic 35.0%
!! ACTTTTGGTGATACACTTGA+AGG + chr1.3:21276224-21276243 MS.gene95931:intron 35.0%
!!! GGTTTTGAGTCCTATGATTA+AGG - chr1.3:21274928-21274947 None:intergenic 35.0%
AACAACACCTCCCGTATATA+TGG + chr1.3:21276283-21276302 MS.gene95931:intron 40.0%
AACATCATGGCCTAACCAAT+TGG + chr1.3:21274880-21274899 MS.gene95931:CDS 40.0%
ACGAAACATGGCAGAAACAA+AGG + chr1.3:21275162-21275181 MS.gene95931:CDS 40.0%
AGGTATGGAGAGAAAGTTGA+AGG + chr1.3:21275505-21275524 MS.gene95931:CDS 40.0%
AGGTGTAGCATGAAAATGTG+AGG - chr1.3:21274734-21274753 None:intergenic 40.0%
ATAGCCTTCCATACACAAAC+TGG - chr1.3:21275470-21275489 None:intergenic 40.0%
ATGATGTTTCTTGGAGTGCA+AGG - chr1.3:21274868-21274887 None:intergenic 40.0%
ATTCGCCCCTAAAATTGTAG+GGG - chr1.3:21276500-21276519 None:intergenic 40.0%
CAATTCGCCCCTAAAATTGT+AGG - chr1.3:21276502-21276521 None:intergenic 40.0%
CTCGATTAATGTGCTTCAAG+TGG + chr1.3:21276323-21276342 MS.gene95931:intron 40.0%
GGTTATGCCTTCATACATGT+TGG - chr1.3:21274949-21274968 None:intergenic 40.0%
GTCAGAGGAGATTAAGAAGA+TGG + chr1.3:21275880-21275899 MS.gene95931:CDS 40.0%
TAGAGTTCAAGCCAGAAAGA+TGG + chr1.3:21276812-21276831 MS.gene95931:CDS 40.0%
TCGCTGTAGATAACGAAACA+TGG + chr1.3:21275150-21275169 MS.gene95931:CDS 40.0%
TCTTTGCCTAAACACAACCT+TGG - chr1.3:21276901-21276920 None:intergenic 40.0%
TGTTTGGTCCAACAATGTCT+TGG + chr1.3:21276195-21276214 MS.gene95931:intron 40.0%
TTGCACTCCAAGAAACATCA+TGG + chr1.3:21274867-21274886 MS.gene95931:CDS 40.0%
TTTGTGTATGGAAGGCTATG+AGG + chr1.3:21275471-21275490 MS.gene95931:CDS 40.0%
! ATGCCAACCCCTACAATTTT+AGG + chr1.3:21276490-21276509 MS.gene95931:intron 40.0%
! ATGTTTGAGATTTGGGTCAG+AGG + chr1.3:21275865-21275884 MS.gene95931:CDS 40.0%
! CTTCTTCAGTTGCTTTGAGT+TGG + chr1.3:21275735-21275754 MS.gene95931:intron 40.0%
! TGCCAACCCCTACAATTTTA+GGG + chr1.3:21276491-21276510 MS.gene95931:intron 40.0%
!! CTACAATTTTAGGGGCGAAT+TGG + chr1.3:21276500-21276519 MS.gene95931:intron 40.0%
!! GCTCTTGCAAAAGGTATTTC+AGG - chr1.3:21275404-21275423 None:intergenic 40.0%
CAAAGACAGGCCAATTGGTT+AGG - chr1.3:21274893-21274912 None:intergenic 45.0%
CATTCCAAAGACAGGCCAAT+TGG - chr1.3:21274898-21274917 None:intergenic 45.0%
CCATGGCCCTTTGAATCTAA+AGG - chr1.3:21274997-21275016 None:intergenic 45.0%
CCTTTAGATTCAAAGGGCCA+TGG + chr1.3:21274994-21275013 MS.gene95931:CDS 45.0%
CTGCATTTAATGGAGGACCA+AGG + chr1.3:21276881-21276900 MS.gene95931:CDS 45.0%
GAAGATGACACATTCCCAGA+TGG + chr1.3:21276706-21276725 MS.gene95931:CDS 45.0%
GAAGGTAGCATTCCAAAGAC+AGG - chr1.3:21274906-21274925 None:intergenic 45.0%
GGTTAGGCCATGATGTTTCT+TGG - chr1.3:21274877-21274896 None:intergenic 45.0%
TCAGAGGGAGGATATCAAGA+AGG + chr1.3:21275829-21275848 MS.gene95931:CDS 45.0%
TTCATGCTACACCTCCAACA+TGG + chr1.3:21274740-21274759 MS.gene95931:CDS 45.0%
TTCTATGGCTGCAACCATGT+TGG - chr1.3:21274757-21274776 None:intergenic 45.0%
! CTAACCAATTGGCCTGTCTT+TGG + chr1.3:21274891-21274910 MS.gene95931:CDS 45.0%
! GCCAACCCCTACAATTTTAG+GGG + chr1.3:21276492-21276511 MS.gene95931:intron 45.0%
GAGGGAGGATATCAAGAAGG+AGG + chr1.3:21275832-21275851 MS.gene95931:CDS 50.0%
GCCCCTAAAATTGTAGGGGT+TGG - chr1.3:21276496-21276515 None:intergenic 50.0%
GGAGGACCAAGGTTGTGTTT+AGG + chr1.3:21276892-21276911 MS.gene95931:CDS 50.0%
TATGGCTGCAACCATGTTGG+AGG - chr1.3:21274754-21274773 None:intergenic 50.0%
TTGCAGGGTTGTGAGTCAGA+GGG + chr1.3:21275814-21275833 MS.gene95931:CDS 50.0%
TTGTCGCGCCAGTTTGTGTA+TGG + chr1.3:21275459-21275478 MS.gene95931:CDS 50.0%
TTTGCAGGGTTGTGAGTCAG+AGG + chr1.3:21275813-21275832 MS.gene95931:CDS 50.0%
CGCGCCAGTTTGTGTATGGA+AGG + chr1.3:21275463-21275482 MS.gene95931:CDS 55.0%
CAGGGTTGTGAGTCAGAGGG+AGG + chr1.3:21275817-21275836 MS.gene95931:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 21274702 21277104 21274702 ID=MS.gene95931
chr1.3 mRNA 21274702 21277104 21274702 ID=MS.gene95931.t1;Parent=MS.gene95931
chr1.3 exon 21274702 21275706 21274702 ID=MS.gene95931.t1.exon1;Parent=MS.gene95931.t1
chr1.3 CDS 21274702 21275706 21274702 ID=cds.MS.gene95931.t1;Parent=MS.gene95931.t1
chr1.3 exon 21275779 21275970 21275779 ID=MS.gene95931.t1.exon2;Parent=MS.gene95931.t1
chr1.3 CDS 21275779 21275970 21275779 ID=cds.MS.gene95931.t1;Parent=MS.gene95931.t1
chr1.3 exon 21276700 21277104 21276700 ID=MS.gene95931.t1.exon3;Parent=MS.gene95931.t1
chr1.3 CDS 21276700 21277104 21276700 ID=cds.MS.gene95931.t1;Parent=MS.gene95931.t1
Gene Sequence

>MS.gene95931

ATGACCAAAACTAACACTTCCAATTTCAACCTCACATTTTCATGCTACACCTCCAACATGGTTGCAGCCATAGAAAACTTGTTTTCTCACATTCTTTTGCTCTTTCAACAAATCCAAATCATAGAAATCATTATTGCATCCATTGTCTTCATAATCATTCATGCCTTGCACTCCAAGAAACATCATGGCCTAACCAATTGGCCTGTCTTTGGAATGCTACCTTCCTTAATCATAGGACTCAAAACCAACATGTATGAAGGCATAACCGATACACTTAAACATCAAAATGGAACCTTTAGATTCAAAGGGCCATGGTTCACTAGTTTCAATTGCATCATTACCTCAGAACCTCATAATTTAGAACATCTTCTCAAAACAAAGTTCACTATTTTCCCTAAAGGAAACTTCTTCAAAGACACAGTTTCTGATTTACTTGGAGACGGTATTTTCGCTGTAGATAACGAAACATGGCAGAAACAAAGGAAAACAGCGAGCATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAACTGATTCATTGTTTGAGCTTGTGAACAATAGGCTTATACCTGTATTAGATTCATCGTTGAAGAAATCGGTTTCCATCGATCTTCAAGATATTTTGTTGAGACTAACTTTTGATAATGTTTGTATGATAGCTTTTGATGTTGATCCCTGTTGTTTGCAACTTCATTTACCTGAAATACCTTTTGCAAGAGCTTTTGAAGATGCAACTGAAGCAACTTTGCTTCGATTTGTCGCGCCAGTTTGTGTATGGAAGGCTATGAGGTTTCTTAACTTAGGTATGGAGAGAAAGTTGAAGGAATCAATACAAAAAGTTGATGAATTTGCTGATAGTGTTATAAGGGCAAGAAAGAAGGAAATTTCTTTGGAACATGATATGGAAGATGATAAGCGAAAATCGGATTTGTTAACCGTGTTTATGAGGCTTAAAGATGAGAATGGAAAGCATTATTCAGATAAGTTTTTGAGGGATATATGTGTAAGTTTTATATTAGCTGGGAGAGACACTTCTTCAGTTGCTTTGAGTTGGTTTTTTTGGTTGGTTGATCAGAATCATGAAGTTGAGGAGAAAATATTAGAAGAGATTTGCAGGGTTGTGAGTCAGAGGGAGGATATCAAGAAGGAGGAGTTTGATGAATGTTTGAGATTTGGGTCAGAGGAGATTAAGAAGATGGATTATTTGCATGCTGCTCTTTCAGAAACTCTTAGATTATATCCTTCTGTTCCTATGGATCATAAAGAGGTAATAAAAGTTTAATTTGATTTGGTCATTTTTTTATTCATTGATATTCATGTTTCTCATATCTTTCATGATTGTGATTTGTGTGCAAATGATTGATGTAAAGTAAAGAGTCATTTTGGTTTATAAATGTGTGAGGCGCTTTTAGAATAGTATCAAAATTACGAAAATGTGTCTAAATGCAACTATTGTTAATCAATTTGATTCTCGAATGTGTTATGTTGGTTTGTTTGGTCCAACAATGTCTTGGTTAGTTACTTTTGGTGATACACTTGAAGGTGTTTTCGTAATGTCAATAGATTTAAAGATTATAGTAACAACACCTCCCGTATATATGGACTAAAATGACTGTTTACTCGATTAATGTGCTTCAAGTGGGATTTTTTTTTTTTTTTTAGAATTCAAGTTTAATCAATGATTGAAACAATCTTCTGAATAAAAAAATCTCTTTGGAATAAACTCTCTTATAGTAGGAGTTATATAAAATAAAAAAAAACTATTCACAAAATTCAAGGAAGTAAAATGCCAACCCCTACAATTTTAGGGGCGAATTGGTCAAGTACTCCTAATAATATTGTTAGAAAAGAGTAATTAATATTTTGTAAGTATTCTTAAATTAAAAATAAAAAATATTTCACACATGACAATATGATCAGATAGATGAAGTAATAGAAATCAACTATCTATTATTGATTGAAGTTCATATTGGAATTTATTTTTATTTTTCATCAGGTGGTGGAAGATGACACATTCCCAGATGGAACAAAACTAAAAAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAACATATGGGGAAAAGATTGCTTAGAGTTCAAGCCAGAAAGATGGTTAACTAAAGATGGTCATTTCATCGGCGAATCTGCCTATAAATTCACTGCATTTAATGGAGGACCAAGGTTGTGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATCATATTTCGTTACCATGTTAAGGTTGTTGAGAATCACCCTATTGTTCCTAAGCTTTCTTTGACACTTTACATGAAACATGGATTGAAAGTTAATCTTCGTAGGCGTTGTGATGAAGAAATTCATAAATTCTTGAAGATTAGTTAG
Protein sequence

>MS.gene95931.t1

MTKTNTSNFNLTFSCYTSNMVAAIENLFSHILLLFQQIQIIEIIIASIVFIIIHALHSKKHHGLTNWPVFGMLPSLIIGLKTNMYEGITDTLKHQNGTFRFKGPWFTSFNCIITSEPHNLEHLLKTKFTIFPKGNFFKDTVSDLLGDGIFAVDNETWQKQRKTASIEFHSTKFRKLTTDSLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFDVDPCCLQLHLPEIPFARAFEDATEATLLRFVAPVCVWKAMRFLNLGMERKLKESIQKVDEFADSVIRARKKEISLEHDMEDDKRKSDLLTVFMRLKDENGKHYSDKFLRDICNHEVEEKILEEICRVVSQREDIKKEEFDECLRFGSEEIKKMDYLHAALSETLRLYPSVPMDHKEVVEDDTFPDGTKLKKGTKVIYAIYSMGRMENIWGKDCLEFKPERWLTKDGHFIGESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFRYHVKVVENHPIVPKLSLTLYMKHGLKVNLRRRCDEEIHKFLKIS