Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97742.t1 | KEH19097.1 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.50E-193 | 685.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97742.t1 | Q7ZVZ7 | 43.7 | 263 | 141 | 5 | 6 | 263 | 27 | 287 | 2.0e-58 | 227.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97742.t1 | A0A072TNV6 | 99.4 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 1.1e-193 | 685.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene97742 | -0.805724 | 1.16E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene97742 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene97742 | -0.829361 | 5.37E-55 | -1.69E-46 |
| MS.gene054999 | MS.gene97742 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene97742 | 0.825258 | 5.17E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene97742 | -0.821031 | 5.01E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene97742 | -0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene97742 | -0.829315 | 5.51E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene97742 | -0.816198 | 6.26E-52 | -1.69E-46 |
| MS.gene056283 | MS.gene97742 | -0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene97742 | -0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene97742 | 0.808473 | 3.04E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene97742 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene97742 | -0.812007 | 5.27E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene97742 | -0.833539 | 5.03E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97742.t1 | MTR_8g037335 | 99.413 | 341 | 2 | 0 | 1 | 341 | 1 | 341 | 0.0 | 703 |
| MS.gene97742.t1 | MTR_5g029210 | 99.322 | 295 | 2 | 0 | 1 | 295 | 1 | 295 | 0.0 | 613 |
| MS.gene97742.t1 | MTR_7g032640 | 60.073 | 273 | 104 | 1 | 1 | 273 | 1 | 268 | 1.61e-123 | 360 |
| MS.gene97742.t1 | MTR_3g075410 | 56.766 | 303 | 125 | 3 | 1 | 302 | 1 | 298 | 7.19e-123 | 358 |
| MS.gene97742.t1 | MTR_7g017430 | 61.232 | 276 | 96 | 2 | 1 | 273 | 1 | 268 | 3.12e-118 | 347 |
| MS.gene97742.t1 | MTR_6g018930 | 55.305 | 311 | 127 | 4 | 1 | 299 | 1 | 311 | 5.23e-115 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97742.t1 | AT1G32190 | 78.523 | 298 | 60 | 1 | 1 | 294 | 1 | 298 | 8.60e-170 | 479 |
| MS.gene97742.t1 | AT2G24320 | 57.239 | 297 | 118 | 3 | 1 | 294 | 1 | 291 | 4.22e-128 | 368 |
| MS.gene97742.t1 | AT2G24320 | 57.586 | 290 | 114 | 3 | 8 | 294 | 1 | 284 | 1.33e-125 | 362 |
| MS.gene97742.t1 | AT4G24760 | 56.393 | 305 | 123 | 3 | 1 | 305 | 1 | 295 | 4.02e-125 | 363 |
| MS.gene97742.t1 | AT3G30380 | 63.060 | 268 | 93 | 2 | 1 | 268 | 1 | 262 | 8.24e-125 | 363 |
| MS.gene97742.t1 | AT4G31020 | 60.517 | 271 | 100 | 2 | 1 | 270 | 1 | 265 | 1.28e-124 | 360 |
| MS.gene97742.t1 | AT4G31020 | 60.517 | 271 | 100 | 2 | 1 | 270 | 1 | 265 | 1.28e-124 | 360 |
| MS.gene97742.t1 | AT3G30380 | 63.060 | 268 | 93 | 2 | 1 | 268 | 1 | 262 | 1.62e-124 | 363 |
| MS.gene97742.t1 | AT3G01690 | 55.519 | 308 | 113 | 3 | 1 | 289 | 1 | 303 | 2.38e-120 | 351 |
| MS.gene97742.t1 | AT5G14390 | 55.484 | 310 | 112 | 4 | 1 | 289 | 1 | 305 | 1.87e-119 | 349 |
| MS.gene97742.t1 | AT1G66900 | 60.364 | 275 | 101 | 3 | 1 | 273 | 1 | 269 | 1.18e-117 | 341 |
| MS.gene97742.t1 | AT5G38220 | 60.448 | 268 | 99 | 3 | 1 | 268 | 1 | 261 | 9.99e-116 | 338 |
| MS.gene97742.t1 | AT5G38220 | 60.448 | 268 | 99 | 3 | 1 | 268 | 1 | 261 | 9.99e-116 | 338 |
| MS.gene97742.t1 | AT1G13610 | 54.915 | 295 | 126 | 4 | 1 | 294 | 1 | 289 | 1.40e-110 | 326 |
| MS.gene97742.t1 | AT1G32190 | 80.682 | 176 | 34 | 0 | 119 | 294 | 38 | 213 | 2.48e-102 | 305 |
| MS.gene97742.t1 | AT5G38220 | 61.502 | 213 | 75 | 3 | 1 | 213 | 1 | 206 | 3.94e-86 | 259 |
| MS.gene97742.t1 | AT1G13610 | 58.286 | 175 | 70 | 1 | 120 | 294 | 18 | 189 | 5.54e-64 | 204 |
Find 78 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACACAGCGGCATTCTTTC+TGG | 0.128334 | 5.1:-19783809 | MS.gene97742:CDS |
| CAACTTGGTCTTGAACATTT+AGG | 0.151307 | 5.1:+19781698 | None:intergenic |
| TTGTCATCTTCTCCATTTCT+TGG | 0.196441 | 5.1:+19782086 | None:intergenic |
| CATGGCAATGCTGCTGATTT+AGG | 0.205462 | 5.1:-19786047 | MS.gene97742:CDS |
| TTCCTGGCCAACTCCATATT+TGG | 0.237019 | 5.1:+19783916 | None:intergenic |
| CAACAAGGCAATGAACATTT+TGG | 0.250347 | 5.1:+19781725 | None:intergenic |
| CCGAAGTTCACAGATTGTTT+TGG | 0.276283 | 5.1:-19781791 | MS.gene97742:CDS |
| TCCCGCAGGTATGACTATTC+TGG | 0.284559 | 5.1:-19784199 | MS.gene97742:intron |
| AACTTGGTCTTGAACATTTA+GGG | 0.297120 | 5.1:+19781699 | None:intergenic |
| CTTGGATGAATTTGCATAGA+TGG | 0.300293 | 5.1:+19782104 | None:intergenic |
| GAATGCCTTGAAACCAAATA+TGG | 0.310658 | 5.1:-19783929 | MS.gene97742:CDS |
| TGATCTCTTTGTTCAACTTA+AGG | 0.314107 | 5.1:-19786015 | MS.gene97742:CDS |
| CATAGATGGCGTATGTAATC+AGG | 0.321303 | 5.1:+19782118 | None:intergenic |
| TGGCAACCGACTATGGAAAA+TGG | 0.324511 | 5.1:-19782203 | MS.gene97742:CDS |
| GGTTACATGGCAACCGACTA+TGG | 0.328727 | 5.1:-19782210 | MS.gene97742:CDS |
| CAGGAAGACGTAATCTTATA+CGG | 0.331817 | 5.1:-19783899 | MS.gene97742:CDS |
| AGCAAAGTTAATCTTGCATA+AGG | 0.341545 | 5.1:+19786077 | None:intergenic |
| AGGTATGACTATTCTGGATA+TGG | 0.361762 | 5.1:-19784193 | MS.gene97742:CDS |
| CAACTCCATATTTGGTTTCA+AGG | 0.370723 | 5.1:+19783924 | None:intergenic |
| CAAAGAAAAGCCTACCTTGC+CGG | 0.379208 | 5.1:+19784162 | None:intergenic |
| GGGAGTCATATGAACCCTTA+TGG | 0.381353 | 5.1:-19782177 | MS.gene97742:CDS |
| ATGCAAATTCATCCAAGAAA+TGG | 0.386608 | 5.1:-19782098 | MS.gene97742:CDS |
| CGTATAAGATTACGTCTTCC+TGG | 0.406105 | 5.1:+19783900 | None:intergenic |
| ACCGCCTCCTTTGATCCATA+AGG | 0.421520 | 5.1:+19782162 | None:intergenic |
| CCGCCTCCTTTGATCCATAA+GGG | 0.422572 | 5.1:+19782163 | None:intergenic |
| GCAAAGTTAATCTTGCATAA+GGG | 0.428314 | 5.1:+19786078 | None:intergenic |
| ATCTTATACGGGCAATCAGT+TGG | 0.448134 | 5.1:-19783887 | MS.gene97742:CDS |
| TTAACTTTGCTTTATTCTCA+TGG | 0.455196 | 5.1:-19786065 | MS.gene97742:CDS |
| AAGTGGACCAACATTGCATT+TGG | 0.456630 | 5.1:-19783864 | MS.gene97742:CDS |
| TCTGGATATGGTGCCTCTAC+CGG | 0.462209 | 5.1:-19784181 | MS.gene97742:CDS |
| TTCTTCAGCTGATACGTTGG+TGG | 0.465989 | 5.1:+19786230 | None:intergenic |
| TTATCATCAGGATGAGGAAT+CGG | 0.478365 | 5.1:+19786167 | None:intergenic |
| CAGAAGATGACGTAGTCAAT+TGG | 0.479966 | 5.1:-19782231 | MS.gene97742:CDS |
| TCATCCTGATGATAACTCAT+TGG | 0.484592 | 5.1:-19786159 | MS.gene97742:CDS |
| CTTCTTGTTGACACAAAACA+TGG | 0.495893 | 5.1:-19786131 | MS.gene97742:CDS |
| AGCTGATACGTTGGTGGTGA+AGG | 0.499741 | 5.1:+19786236 | None:intergenic |
| CTTACATGTATTACAAGGAC+AGG | 0.499842 | 5.1:+19783323 | None:intergenic |
| ACATCCAATGAGTTATCATC+AGG | 0.502138 | 5.1:+19786155 | None:intergenic |
| ATTTACTTACATGTATTACA+AGG | 0.507529 | 5.1:+19783318 | None:intergenic |
| AAAGCCTACCTTGCCGGTAG+AGG | 0.512003 | 5.1:+19784168 | None:intergenic |
| TTCTTCTTCAGCTGATACGT+TGG | 0.513005 | 5.1:+19786227 | None:intergenic |
| CTCTATGTCAGCATATGTGC+TGG | 0.520235 | 5.1:+19783961 | None:intergenic |
| AACCAAATATGGAGTTGGCC+AGG | 0.523037 | 5.1:-19783918 | MS.gene97742:CDS |
| AATCTCAGAGTTAATCTCAT+GGG | 0.526908 | 5.1:-19785990 | MS.gene97742:CDS |
| AAACAACTCATGCAACAACT+TGG | 0.530466 | 5.1:+19781683 | None:intergenic |
| GAACATCAACAAAATAAAGA+AGG | 0.540351 | 5.1:-19783354 | MS.gene97742:CDS |
| TACGGGCAATCAGTTGGAAG+TGG | 0.541674 | 5.1:-19783881 | MS.gene97742:CDS |
| TTAGCTGCCAAATGCAATGT+TGG | 0.556035 | 5.1:+19783857 | None:intergenic |
| CTTGAAACCAAATATGGAGT+TGG | 0.559208 | 5.1:-19783923 | MS.gene97742:CDS |
| GCATATGTGCTGGATTCACT+AGG | 0.560112 | 5.1:+19783971 | None:intergenic |
| CAGCTGAAGAAGAATGATGA+TGG | 0.561573 | 5.1:-19786218 | MS.gene97742:CDS |
| GACGTAGTCAATTGGTTACA+TGG | 0.564056 | 5.1:-19782223 | MS.gene97742:CDS |
| TATGAACCCTTATGGATCAA+AGG | 0.569011 | 5.1:-19782169 | MS.gene97742:CDS |
| TGTGTGATGAATGGGTTGCA+TGG | 0.573626 | 5.1:-19786294 | None:intergenic |
| CCAAAACAATCTGTGAACTT+CGG | 0.579808 | 5.1:+19781791 | None:intergenic |
| AGGAAGACGTAATCTTATAC+GGG | 0.584093 | 5.1:-19783898 | MS.gene97742:CDS |
| CAGCACATATGCTGACATAG+AGG | 0.584108 | 5.1:-19783960 | MS.gene97742:CDS |
| ACCGACTATGGAAAATGGCA+AGG | 0.593180 | 5.1:-19782198 | MS.gene97742:CDS |
| CCCTTATGGATCAAAGGAGG+CGG | 0.604217 | 5.1:-19782163 | MS.gene97742:CDS |
| AGAACCACGCCTCTCAGCCT+CGG | 0.605262 | 5.1:+19783830 | None:intergenic |
| AATGAGTTATCATCAGGATG+AGG | 0.605904 | 5.1:+19786161 | None:intergenic |
| TAATCTCAGAGTTAATCTCA+TGG | 0.609130 | 5.1:-19785991 | MS.gene97742:CDS |
| ATCTCAGAGTTAATCTCATG+GGG | 0.613897 | 5.1:-19785989 | MS.gene97742:intron |
| ATAGATGGCGTATGTAATCA+GGG | 0.614420 | 5.1:+19782119 | None:intergenic |
| ATGAGGAATCGGAGACGCGG+TGG | 0.623975 | 5.1:+19786178 | None:intergenic |
| AATCTGTGAACTTCGGTAAG+CGG | 0.623999 | 5.1:+19781798 | None:intergenic |
| GAATGATGATGGCAAACTCA+CGG | 0.632646 | 5.1:-19786207 | MS.gene97742:CDS |
| ATATGGTGCCTCTACCGGCA+AGG | 0.642432 | 5.1:-19784176 | MS.gene97742:intron |
| GTTACCGAGGCTGAGAGGCG+TGG | 0.644100 | 5.1:-19783834 | MS.gene97742:CDS |
| GAACATTTAGGGTAGCAACA+AGG | 0.657420 | 5.1:+19781710 | None:intergenic |
| GCTAAGTTACCGAGGCTGAG+AGG | 0.669433 | 5.1:-19783839 | MS.gene97742:CDS |
| TGATACGTTGGTGGTGAAGG+TGG | 0.669917 | 5.1:+19786239 | None:intergenic |
| CCGACTATGGAAAATGGCAA+GGG | 0.671837 | 5.1:-19782197 | MS.gene97742:CDS |
| ATTTGGCAGCTAAGTTACCG+AGG | 0.676887 | 5.1:-19783847 | MS.gene97742:CDS |
| GAACCCTTATGGATCAAAGG+AGG | 0.684609 | 5.1:-19782166 | MS.gene97742:CDS |
| AGGATGAGGAATCGGAGACG+CGG | 0.692644 | 5.1:+19786175 | None:intergenic |
| AGAGGCGTGGTTCTACACAG+CGG | 0.771216 | 5.1:-19783821 | MS.gene97742:CDS |
| TGATGATGGCAAACTCACGG+TGG | 0.774722 | 5.1:-19786204 | MS.gene97742:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTGTAAATTATATATTT+TGG | - | chr5.1:19784422-19784441 | MS.gene97742:intron | 10.0% |
| !! | AAAAAAAAAATGTCAACTAT+AGG | + | chr5.1:19785513-19785532 | None:intergenic | 15.0% |
| !! | AAATTTATACAAAAGCTAAA+TGG | + | chr5.1:19783492-19783511 | None:intergenic | 15.0% |
| !! | AATTTATACAAAAGCTAAAT+GGG | + | chr5.1:19783491-19783510 | None:intergenic | 15.0% |
| !! | CAACAAAAATATAGTTTATT+TGG | - | chr5.1:19782259-19782278 | MS.gene97742:intron | 15.0% |
| !! | TAAATTATAAAAGTGAGTTT+CGG | - | chr5.1:19784494-19784513 | MS.gene97742:intron | 15.0% |
| !! | TTTATATTCTAAATACATTG+AGG | - | chr5.1:19785548-19785567 | MS.gene97742:intron | 15.0% |
| !!! | AATGTATTTAGAATATAAAC+TGG | + | chr5.1:19785547-19785566 | None:intergenic | 15.0% |
| !!! | ATGATTAATTTGAAAAACAT+AGG | + | chr5.1:19782026-19782045 | None:intergenic | 15.0% |
| !!! | ATTTTATAGAATCAATTCAT+TGG | - | chr5.1:19783334-19783353 | MS.gene97742:CDS | 15.0% |
| !!! | ATTTTTTGTTTGTTTGTTTA+GGG | + | chr5.1:19782692-19782711 | None:intergenic | 15.0% |
| !!! | TTAAATTCTAATGCTTTAAA+AGG | + | chr5.1:19783044-19783063 | None:intergenic | 15.0% |
| !! | AAATTGAGAAAGTAAAACAA+AGG | + | chr5.1:19782874-19782893 | None:intergenic | 20.0% |
| !! | AATAGTAAATCGAATGTAAA+GGG | + | chr5.1:19783303-19783322 | None:intergenic | 20.0% |
| !! | ATCAAGATAATACAAAACAA+GGG | + | chr5.1:19782209-19782228 | None:intergenic | 20.0% |
| !! | ATGAAAAAGTTAAAGTGAAA+AGG | - | chr5.1:19782710-19782729 | MS.gene97742:intron | 20.0% |
| !! | ATGTGTCTTTCATTTATTAA+TGG | - | chr5.1:19784462-19784481 | MS.gene97742:intron | 20.0% |
| !! | ATTTACTTACATGTATTACA+AGG | + | chr5.1:19784659-19784678 | None:intergenic | 20.0% |
| !! | GAACTTCAAATCAATAATAA+TGG | + | chr5.1:19783469-19783488 | None:intergenic | 20.0% |
| !! | TAATAGTAAATCGAATGTAA+AGG | + | chr5.1:19783304-19783323 | None:intergenic | 20.0% |
| !! | TATTATGTTAATCTATGCAT+TGG | - | chr5.1:19782319-19782338 | MS.gene97742:intron | 20.0% |
| !! | TTAACTCAAATTCCAAATAA+TGG | + | chr5.1:19784334-19784353 | None:intergenic | 20.0% |
| !! | TTTACATTCGATTTACTATT+AGG | - | chr5.1:19783303-19783322 | MS.gene97742:intron | 20.0% |
| !! | TTTGACATTTATAAGGTAAT+AGG | - | chr5.1:19784225-19784244 | MS.gene97742:intron | 20.0% |
| !!! | ATAGTTTATTTGGTTTTAGT+GGG | - | chr5.1:19782269-19782288 | MS.gene97742:intron | 20.0% |
| !!! | CATTTTTTGTTTGTTTGTTT+AGG | + | chr5.1:19782693-19782712 | None:intergenic | 20.0% |
| !!! | CTTTAAAAGGAAAATAATGT+TGG | + | chr5.1:19783031-19783050 | None:intergenic | 20.0% |
| !!! | TATAGTTTATTTGGTTTTAG+TGG | - | chr5.1:19782268-19782287 | MS.gene97742:intron | 20.0% |
| !!! | TTTAAACATGCTACAATTTT+AGG | + | chr5.1:19785643-19785662 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGACATTTATA+AGG | - | chr5.1:19784218-19784237 | MS.gene97742:intron | 20.0% |
| !!! | TTTTTTAAGATGCCATTATT+TGG | - | chr5.1:19784319-19784338 | MS.gene97742:intron | 20.0% |
| ! | AAAAAAGCAGCATGTATTTA+TGG | - | chr5.1:19782748-19782767 | MS.gene97742:intron | 25.0% |
| ! | AAAAAATAGCTTGAGTTTGT+TGG | - | chr5.1:19785164-19785183 | MS.gene97742:intron | 25.0% |
| ! | AAGTTAAAGTGAAAAGGAAA+AGG | - | chr5.1:19782716-19782735 | MS.gene97742:intron | 25.0% |
| ! | ATGGCAAAGTATATTATTAC+AGG | + | chr5.1:19783450-19783469 | None:intergenic | 25.0% |
| ! | ATTTACCTCTAAATCTCTAT+TGG | - | chr5.1:19784979-19784998 | MS.gene97742:intron | 25.0% |
| ! | CATCAAGATAATACAAAACA+AGG | + | chr5.1:19782210-19782229 | None:intergenic | 25.0% |
| ! | CTTATTGTGTTAAATACATG+TGG | + | chr5.1:19785434-19785453 | None:intergenic | 25.0% |
| ! | GAAAATGTGAAATGTATGTT+TGG | - | chr5.1:19783064-19783083 | MS.gene97742:intron | 25.0% |
| ! | GAAAGATTACAACAATTCAA+AGG | + | chr5.1:19783414-19783433 | None:intergenic | 25.0% |
| ! | GAACATCAACAAAATAAAGA+AGG | - | chr5.1:19784620-19784639 | MS.gene97742:intron | 25.0% |
| ! | GATGTAAATCAAACCATTTA+TGG | + | chr5.1:19783618-19783637 | None:intergenic | 25.0% |
| ! | TAAAAAGTGAACATGTACAT+TGG | - | chr5.1:19783591-19783610 | MS.gene97742:intron | 25.0% |
| ! | TAGTCTTTCTCTTTCTTATT+AGG | - | chr5.1:19782236-19782255 | MS.gene97742:CDS | 25.0% |
| ! | TCCAATAAAATAGTAAGTGT+TGG | + | chr5.1:19785354-19785373 | None:intergenic | 25.0% |
| ! | TGAGAACAAAAATGTTATGA+TGG | - | chr5.1:19785695-19785714 | MS.gene97742:intron | 25.0% |
| ! | TGGAATAACAACATTAGATT+TGG | + | chr5.1:19785222-19785241 | None:intergenic | 25.0% |
| !! | ATTGTCATTTCTTTGATGTA+TGG | + | chr5.1:19782568-19782587 | None:intergenic | 25.0% |
| !! | ATTTAGAATATAAACTGGTG+AGG | + | chr5.1:19785542-19785561 | None:intergenic | 25.0% |
| !! | GCAGATGATAATGATTTAAT+TGG | + | chr5.1:19785601-19785620 | None:intergenic | 25.0% |
| !! | TACCTTTGTTTAGATTCTAT+TGG | - | chr5.1:19782795-19782814 | MS.gene97742:intron | 25.0% |
| !! | TCCAACACTTACTATTTTAT+TGG | - | chr5.1:19785350-19785369 | MS.gene97742:intron | 25.0% |
| !! | TTAACTTTGCTTTATTCTCA+TGG | - | chr5.1:19781909-19781928 | MS.gene97742:intron | 25.0% |
| !!! | AATGATTGATTCTCTAGTTT+TGG | - | chr5.1:19784767-19784786 | MS.gene97742:intron | 25.0% |
| !!! | ACATGCTAAATTATTTTGCA+GGG | - | chr5.1:19785718-19785737 | MS.gene97742:intron | 25.0% |
| !!! | ATAATTGATTTTGACACGTT+TGG | - | chr5.1:19783127-19783146 | MS.gene97742:intron | 25.0% |
| !!! | ATTTGCTTTAGAAGTTTCAT+TGG | - | chr5.1:19783532-19783551 | MS.gene97742:intron | 25.0% |
| !!! | GTCTTCGTATTTATTTCTTT+TGG | - | chr5.1:19784705-19784724 | MS.gene97742:intron | 25.0% |
| !!! | TTTATTTCTTTTGGCATTCA+AGG | - | chr5.1:19784714-19784733 | MS.gene97742:intron | 25.0% |
| AAAGTGAAAAGGAAAAGGAA+AGG | - | chr5.1:19782721-19782740 | MS.gene97742:intron | 30.0% | |
| AAGTGAAAAGGAAAAGGAAA+GGG | - | chr5.1:19782722-19782741 | MS.gene97742:intron | 30.0% | |
| AATCAGGACAATTGATAGAT+AGG | + | chr5.1:19786125-19786144 | None:intergenic | 30.0% | |
| AATCTCAGAGTTAATCTCAT+GGG | - | chr5.1:19781984-19782003 | MS.gene97742:intron | 30.0% | |
| ACTACCAAGAAGAAAAAGTT+AGG | + | chr5.1:19782821-19782840 | None:intergenic | 30.0% | |
| AGCAAAGTTAATCTTGCATA+AGG | + | chr5.1:19781900-19781919 | None:intergenic | 30.0% | |
| ATCAGGACAATTGATAGATA+GGG | + | chr5.1:19786124-19786143 | None:intergenic | 30.0% | |
| ATGCAAATTCATCCAAGAAA+TGG | - | chr5.1:19785876-19785895 | MS.gene97742:intron | 30.0% | |
| GCAAAGTTAATCTTGCATAA+GGG | + | chr5.1:19781899-19781918 | None:intergenic | 30.0% | |
| GGATACATTCATGTAAAAGT+GGG | + | chr5.1:19783271-19783290 | None:intergenic | 30.0% | |
| GTAGAAAGTAGATGAAGTTA+AGG | - | chr5.1:19782643-19782662 | MS.gene97742:intron | 30.0% | |
| TAAGAAAATGCTTAGGTGTA+TGG | + | chr5.1:19783384-19783403 | None:intergenic | 30.0% | |
| TAATCTACCCCTAATTATGA+TGG | + | chr5.1:19785286-19785305 | None:intergenic | 30.0% | |
| TAATCTCAGAGTTAATCTCA+TGG | - | chr5.1:19781983-19782002 | MS.gene97742:intron | 30.0% | |
| TCTAACTTGATGCTAGAATT+TGG | - | chr5.1:19783190-19783209 | MS.gene97742:intron | 30.0% | |
| TCTATAAATCTAACACCGAT+TGG | + | chr5.1:19784953-19784972 | None:intergenic | 30.0% | |
| TGATCTCTTTGTTCAACTTA+AGG | - | chr5.1:19781959-19781978 | MS.gene97742:intron | 30.0% | |
| TGGATACATTCATGTAAAAG+TGG | + | chr5.1:19783272-19783291 | None:intergenic | 30.0% | |
| TGTAGGATAAGAAAATGCTT+AGG | + | chr5.1:19783391-19783410 | None:intergenic | 30.0% | |
| TTACTTCTGTACAACATTGT+CGG | - | chr5.1:19785074-19785093 | MS.gene97742:intron | 30.0% | |
| TTATTGGATGAAATGCACAT+GGG | - | chr5.1:19785366-19785385 | MS.gene97742:intron | 30.0% | |
| TTTATTGGATGAAATGCACA+TGG | - | chr5.1:19785365-19785384 | MS.gene97742:intron | 30.0% | |
| ! | AACATTAATGGATCGGTTTA+AGG | + | chr5.1:19785251-19785270 | None:intergenic | 30.0% |
| ! | AAGCAATTTTCCATTAAGTG+AGG | - | chr5.1:19784895-19784914 | MS.gene97742:intron | 30.0% |
| ! | AAGTTAGAGTCAATTTTGGA+AGG | + | chr5.1:19783178-19783197 | None:intergenic | 30.0% |
| ! | AATTTTCCATTAAGTGAGGT+TGG | - | chr5.1:19784899-19784918 | MS.gene97742:intron | 30.0% |
| ! | AGAGTTGGAACATTTGTTAA+AGG | + | chr5.1:19785035-19785054 | None:intergenic | 30.0% |
| ! | CATCAAGTTAGAGTCAATTT+TGG | + | chr5.1:19783182-19783201 | None:intergenic | 30.0% |
| ! | CTGCATAGTTTTTGCAAAAT+CGG | + | chr5.1:19782489-19782508 | None:intergenic | 30.0% |
| ! | TATTTTGTTGATGTTCTGCA+TGG | + | chr5.1:19784616-19784635 | None:intergenic | 30.0% |
| ! | TCCTCAAAACATTAATGGAT+CGG | + | chr5.1:19785258-19785277 | None:intergenic | 30.0% |
| ! | TGGGTTGAACAATAAATTTG+AGG | + | chr5.1:19783252-19783271 | None:intergenic | 30.0% |
| ! | TTACAACAATTCAAAGGTGT+AGG | + | chr5.1:19783408-19783427 | None:intergenic | 30.0% |
| ! | TTTGGAGTTATCACTATACA+TGG | - | chr5.1:19784785-19784804 | MS.gene97742:intron | 30.0% |
| !! | AACTTGGTCTTGAACATTTA+GGG | + | chr5.1:19786278-19786297 | None:intergenic | 30.0% |
| !! | GACATGCTAAATTATTTTGC+AGG | - | chr5.1:19785717-19785736 | MS.gene97742:intron | 30.0% |
| !! | GGAAAATAATGTTGGTAGTA+TGG | + | chr5.1:19783023-19783042 | None:intergenic | 30.0% |
| !!! | AGAGTTTTTTGGTGTGTTTA+TGG | - | chr5.1:19782953-19782972 | MS.gene97742:intron | 30.0% |
| !!! | AGTTTTTTGGTGTGTTTATG+GGG | - | chr5.1:19782955-19782974 | MS.gene97742:intron | 30.0% |
| !!! | ATTTTGATTCCAGACTTTGT+CGG | + | chr5.1:19785936-19785955 | None:intergenic | 30.0% |
| !!! | GAGTTTTTTGGTGTGTTTAT+GGG | - | chr5.1:19782954-19782973 | MS.gene97742:intron | 30.0% |
| AAAGCTTTCAAAGAACACCA+AGG | + | chr5.1:19782988-19783007 | None:intergenic | 35.0% | |
| AAGCTTTCAAAGAACACCAA+GGG | + | chr5.1:19782987-19783006 | None:intergenic | 35.0% | |
| AATGAGTTATCATCAGGATG+AGG | + | chr5.1:19781816-19781835 | None:intergenic | 35.0% | |
| ACATCCAATGAGTTATCATC+AGG | + | chr5.1:19781822-19781841 | None:intergenic | 35.0% | |
| ACTATAGGATGCAATCAAAG+TGG | + | chr5.1:19785498-19785517 | None:intergenic | 35.0% | |
| AGGAAGACGTAATCTTATAC+GGG | - | chr5.1:19784076-19784095 | MS.gene97742:intron | 35.0% | |
| AGGTATGACTATTCTGGATA+TGG | - | chr5.1:19783781-19783800 | MS.gene97742:CDS | 35.0% | |
| ATAGATGGCGTATGTAATCA+GGG | + | chr5.1:19785858-19785877 | None:intergenic | 35.0% | |
| ATCGACCAATAGAGATTTAG+AGG | + | chr5.1:19784987-19785006 | None:intergenic | 35.0% | |
| ATCTCAGAGTTAATCTCATG+GGG | - | chr5.1:19781985-19782004 | MS.gene97742:intron | 35.0% | |
| CAGGAAGACGTAATCTTATA+CGG | - | chr5.1:19784075-19784094 | MS.gene97742:intron | 35.0% | |
| CATGTACATTGGTCCATAAA+TGG | - | chr5.1:19783602-19783621 | MS.gene97742:intron | 35.0% | |
| CCAAAACAATCTGTGAACTT+CGG | + | chr5.1:19786186-19786205 | None:intergenic | 35.0% | |
| CCAATGCCATAAAATCCAAT+CGG | - | chr5.1:19784935-19784954 | MS.gene97742:intron | 35.0% | |
| CGATCTCCTCAAAACATTAA+TGG | + | chr5.1:19785263-19785282 | None:intergenic | 35.0% | |
| CGGTAGAACTTAAAATCTAC+TGG | + | chr5.1:19785012-19785031 | None:intergenic | 35.0% | |
| CTTACATGTATTACAAGGAC+AGG | + | chr5.1:19784654-19784673 | None:intergenic | 35.0% | |
| CTTCTTGTTGACACAAAACA+TGG | - | chr5.1:19781843-19781862 | MS.gene97742:intron | 35.0% | |
| CTTGAAACCAAATATGGAGT+TGG | - | chr5.1:19784051-19784070 | MS.gene97742:intron | 35.0% | |
| CTTGGATGAATTTGCATAGA+TGG | + | chr5.1:19785873-19785892 | None:intergenic | 35.0% | |
| GAATGCCTTGAAACCAAATA+TGG | - | chr5.1:19784045-19784064 | MS.gene97742:intron | 35.0% | |
| GAATGTAAAGGGCTTATGTT+TGG | + | chr5.1:19783292-19783311 | None:intergenic | 35.0% | |
| GGCCAATAGAATCTAAACAA+AGG | + | chr5.1:19782800-19782819 | None:intergenic | 35.0% | |
| GGGTTAATTAGTCGAAATCA+CGG | - | chr5.1:19782454-19782473 | MS.gene97742:intron | 35.0% | |
| TAATACAAAACAAGGGTCAG+TGG | + | chr5.1:19782202-19782221 | None:intergenic | 35.0% | |
| TATGAACCCTTATGGATCAA+AGG | - | chr5.1:19785805-19785824 | MS.gene97742:intron | 35.0% | |
| TCATCCTGATGATAACTCAT+TGG | - | chr5.1:19781815-19781834 | MS.gene97742:CDS | 35.0% | |
| TCTAAATCTCTATTGGTCGA+TGG | - | chr5.1:19784986-19785005 | MS.gene97742:intron | 35.0% | |
| TTAATTAGTCGAAATCACGG+TGG | - | chr5.1:19782457-19782476 | MS.gene97742:intron | 35.0% | |
| TTATCATCAGGATGAGGAAT+CGG | + | chr5.1:19781810-19781829 | None:intergenic | 35.0% | |
| TTGTCATCTTCTCCATTTCT+TGG | + | chr5.1:19785891-19785910 | None:intergenic | 35.0% | |
| ! | ACCGATCCATTAATGTTTTG+AGG | - | chr5.1:19785254-19785273 | MS.gene97742:intron | 35.0% |
| ! | CAACAAGGCAATGAACATTT+TGG | + | chr5.1:19786252-19786271 | None:intergenic | 35.0% |
| ! | CAACTCCATATTTGGTTTCA+AGG | + | chr5.1:19784053-19784072 | None:intergenic | 35.0% |
| ! | CATTTTGGACAACAACAACT+AGG | + | chr5.1:19786237-19786256 | None:intergenic | 35.0% |
| ! | GTGAAATGTATGTTTGGTTC+CGG | - | chr5.1:19783070-19783089 | MS.gene97742:intron | 35.0% |
| ! | GTTGGAACATTTGTTAAAGG+CGG | + | chr5.1:19785032-19785051 | None:intergenic | 35.0% |
| !! | CAACTTGGTCTTGAACATTT+AGG | + | chr5.1:19786279-19786298 | None:intergenic | 35.0% |
| !! | CTAACACCGATTGGATTTTA+TGG | + | chr5.1:19784944-19784963 | None:intergenic | 35.0% |
| !! | GGATCGGTTTAAGGTATTTT+TGG | + | chr5.1:19785242-19785261 | None:intergenic | 35.0% |
| !! | GTGAGTATGTGTTTTAGATC+TGG | - | chr5.1:19782378-19782397 | MS.gene97742:intron | 35.0% |
| !! | TTGGCCTAACTTTTTCTTCT+TGG | - | chr5.1:19782814-19782833 | MS.gene97742:intron | 35.0% |
| !!! | GGACATAGCATAGAGTTTTT+TGG | - | chr5.1:19782942-19782961 | MS.gene97742:intron | 35.0% |
| AAGCTTGTGTGATACTTCTC+TGG | - | chr5.1:19785127-19785146 | MS.gene97742:intron | 40.0% | |
| AAGTGGACCAACATTGCATT+TGG | - | chr5.1:19784110-19784129 | MS.gene97742:intron | 40.0% | |
| AATCTGTGAACTTCGGTAAG+CGG | + | chr5.1:19786179-19786198 | None:intergenic | 40.0% | |
| ACCATCCTGCTTGAATTTCA+TGG | - | chr5.1:19784824-19784843 | MS.gene97742:intron | 40.0% | |
| ACCATGAAATTCAAGCAGGA+TGG | + | chr5.1:19784828-19784847 | None:intergenic | 40.0% | |
| ACCTGCGGGAAGAAAAAAAA+AGG | + | chr5.1:19783765-19783784 | None:intergenic | 40.0% | |
| AGCTACCATGAAATTCAAGC+AGG | + | chr5.1:19784832-19784851 | None:intergenic | 40.0% | |
| AGGAGATCGCCATCATAATT+AGG | - | chr5.1:19785274-19785293 | MS.gene97742:intron | 40.0% | |
| ATCCAGAATAGTCATACCTG+CGG | + | chr5.1:19783780-19783799 | None:intergenic | 40.0% | |
| ATCCATGTAGGGGTAAAAAC+TGG | + | chr5.1:19782920-19782939 | None:intergenic | 40.0% | |
| ATCTTATACGGGCAATCAGT+TGG | - | chr5.1:19784087-19784106 | MS.gene97742:intron | 40.0% | |
| ATGAAATTCAAGCAGGATGG+TGG | + | chr5.1:19784825-19784844 | None:intergenic | 40.0% | |
| ATGTAGCCAACCTCACTTAA+TGG | + | chr5.1:19784908-19784927 | None:intergenic | 40.0% | |
| ATGTTCTGCATGGTTGGAAA+AGG | + | chr5.1:19784606-19784625 | None:intergenic | 40.0% | |
| CAAAAAGATCCGACAAAGTC+TGG | - | chr5.1:19785924-19785943 | MS.gene97742:intron | 40.0% | |
| CAGAAGATGACGTAGTCAAT+TGG | - | chr5.1:19785743-19785762 | MS.gene97742:intron | 40.0% | |
| CAGCTGAAGAAGAATGATGA+TGG | - | chr5.1:19781756-19781775 | MS.gene97742:CDS | 40.0% | |
| CATAGATGGCGTATGTAATC+AGG | + | chr5.1:19785859-19785878 | None:intergenic | 40.0% | |
| CGTATAAGATTACGTCTTCC+TGG | + | chr5.1:19784077-19784096 | None:intergenic | 40.0% | |
| GACGTAGTCAATTGGTTACA+TGG | - | chr5.1:19785751-19785770 | MS.gene97742:intron | 40.0% | |
| GAGATCGCCATCATAATTAG+GGG | - | chr5.1:19785276-19785295 | MS.gene97742:intron | 40.0% | |
| GATGTGCATGTTTGGTATCA+GGG | - | chr5.1:19782434-19782453 | MS.gene97742:intron | 40.0% | |
| GCTTGAATTTCATGGTAGCT+AGG | - | chr5.1:19784832-19784851 | MS.gene97742:intron | 40.0% | |
| GGAGATCGCCATCATAATTA+GGG | - | chr5.1:19785275-19785294 | MS.gene97742:intron | 40.0% | |
| GTACAGAAGTAAATGTACGC+AGG | + | chr5.1:19785066-19785085 | None:intergenic | 40.0% | |
| GTAGATGAAGTTAAGGCTTC+TGG | - | chr5.1:19782650-19782669 | MS.gene97742:intron | 40.0% | |
| GTGAATGTGATGTGCATGTT+TGG | - | chr5.1:19782426-19782445 | MS.gene97742:intron | 40.0% | |
| TCAATTGTCCTGATTGTTGC+TGG | - | chr5.1:19786130-19786149 | MS.gene97742:CDS | 40.0% | |
| TGATGTGCATGTTTGGTATC+AGG | - | chr5.1:19782433-19782452 | MS.gene97742:intron | 40.0% | |
| TGCAGCAACACTTCATACTA+GGG | + | chr5.1:19785990-19786009 | None:intergenic | 40.0% | |
| TGTTCTGCATGGTTGGAAAA+GGG | + | chr5.1:19784605-19784624 | None:intergenic | 40.0% | |
| TTAGCTGCCAAATGCAATGT+TGG | + | chr5.1:19784120-19784139 | None:intergenic | 40.0% | |
| TTCTTCTTCAGCTGATACGT+TGG | + | chr5.1:19781750-19781769 | None:intergenic | 40.0% | |
| TTGTTGATGTTCTGCATGGT+TGG | + | chr5.1:19784612-19784631 | None:intergenic | 40.0% | |
| TTTGATGTATGGTATCACCG+TGG | + | chr5.1:19782557-19782576 | None:intergenic | 40.0% | |
| ! | ACATTTTACTGCACAACCAC+TGG | + | chr5.1:19785101-19785120 | None:intergenic | 40.0% |
| ! | ATTTTGCCTCCTCCAAAAAC+CGG | + | chr5.1:19783092-19783111 | None:intergenic | 40.0% |
| ! | CAGCTTTAGTCTAGAAATGC+TGG | + | chr5.1:19783721-19783740 | None:intergenic | 40.0% |
| ! | CCGAAGTTCACAGATTGTTT+TGG | - | chr5.1:19786183-19786202 | MS.gene97742:CDS | 40.0% |
| ! | CCGATTGGATTTTATGGCAT+TGG | + | chr5.1:19784938-19784957 | None:intergenic | 40.0% |
| ! | GAACATTTAGGGTAGCAACA+AGG | + | chr5.1:19786267-19786286 | None:intergenic | 40.0% |
| ! | GACTTTGTCGGATCTTTTTG+AGG | + | chr5.1:19785924-19785943 | None:intergenic | 40.0% |
| ! | TTCCAGTTTTTACCCCTACA+TGG | - | chr5.1:19782915-19782934 | MS.gene97742:intron | 40.0% |
| ! | TTTTTACCCCTACATGGATG+TGG | - | chr5.1:19782921-19782940 | MS.gene97742:intron | 40.0% |
| !! | GAATGATGATGGCAAACTCA+CGG | - | chr5.1:19781767-19781786 | MS.gene97742:CDS | 40.0% |
| !! | GTATGTTTGGTTCCGGTTTT+TGG | - | chr5.1:19783077-19783096 | MS.gene97742:intron | 40.0% |
| !! | TTTTGGTGTGTTTATGGGGA+TGG | - | chr5.1:19782959-19782978 | MS.gene97742:intron | 40.0% |
| !!! | ACCTTTTTTTTTCTTCCCGC+AGG | - | chr5.1:19783761-19783780 | MS.gene97742:CDS | 40.0% |
| AACCAAATATGGAGTTGGCC+AGG | - | chr5.1:19784056-19784075 | MS.gene97742:intron | 45.0% | |
| ACCGACTATGGAAAATGGCA+AGG | - | chr5.1:19785776-19785795 | MS.gene97742:intron | 45.0% | |
| ACCGTGGTTACTCGAAATCA+CGG | + | chr5.1:19782541-19782560 | None:intergenic | 45.0% | |
| ACGACTAGAGAAAGGACACA+AGG | + | chr5.1:19784858-19784877 | None:intergenic | 45.0% | |
| ATTTGGCAGCTAAGTTACCG+AGG | - | chr5.1:19784127-19784146 | MS.gene97742:intron | 45.0% | |
| CAAAGAAAAGCCTACCTTGC+CGG | + | chr5.1:19783815-19783834 | None:intergenic | 45.0% | |
| CAGCACATATGCTGACATAG+AGG | - | chr5.1:19784014-19784033 | MS.gene97742:intron | 45.0% | |
| CATACTAGGGCATGTACATG+TGG | + | chr5.1:19785977-19785996 | None:intergenic | 45.0% | |
| CCGACTATGGAAAATGGCAA+GGG | - | chr5.1:19785777-19785796 | MS.gene97742:intron | 45.0% | |
| CTAGGTTTCCAGCAACAATC+AGG | + | chr5.1:19786141-19786160 | None:intergenic | 45.0% | |
| CTATGTCCACATCCATGTAG+GGG | + | chr5.1:19782930-19782949 | None:intergenic | 45.0% | |
| CTCTATGTCAGCATATGTGC+TGG | + | chr5.1:19784016-19784035 | None:intergenic | 45.0% | |
| CTGCAGCAACACTTCATACT+AGG | + | chr5.1:19785991-19786010 | None:intergenic | 45.0% | |
| GAACCCTTATGGATCAAAGG+AGG | - | chr5.1:19785808-19785827 | MS.gene97742:intron | 45.0% | |
| GCATATGTGCTGGATTCACT+AGG | + | chr5.1:19784006-19784025 | None:intergenic | 45.0% | |
| GCTATGTCCACATCCATGTA+GGG | + | chr5.1:19782931-19782950 | None:intergenic | 45.0% | |
| GGGAGTCATATGAACCCTTA+TGG | - | chr5.1:19785797-19785816 | MS.gene97742:intron | 45.0% | |
| TAGGCCCCACATATAGTGTT+GGG | - | chr5.1:19785406-19785425 | MS.gene97742:intron | 45.0% | |
| TCCAGAATAGTCATACCTGC+GGG | + | chr5.1:19783779-19783798 | None:intergenic | 45.0% | |
| TGCTATGTCCACATCCATGT+AGG | + | chr5.1:19782932-19782951 | None:intergenic | 45.0% | |
| TGGAGCCCAACACTATATGT+GGG | + | chr5.1:19785414-19785433 | None:intergenic | 45.0% | |
| TGGCAACCGACTATGGAAAA+TGG | - | chr5.1:19785771-19785790 | MS.gene97742:intron | 45.0% | |
| TGGTTACTCGAAATCACGGT+GGG | + | chr5.1:19782537-19782556 | None:intergenic | 45.0% | |
| TGTTGTGCACGACTAGAGAA+AGG | + | chr5.1:19784866-19784885 | None:intergenic | 45.0% | |
| TTCCTGGCCAACTCCATATT+TGG | + | chr5.1:19784061-19784080 | None:intergenic | 45.0% | |
| TTCTTCAGCTGATACGTTGG+TGG | + | chr5.1:19781747-19781766 | None:intergenic | 45.0% | |
| ! | ACCGTGATTTCGAGTAACCA+CGG | - | chr5.1:19782537-19782556 | MS.gene97742:intron | 45.0% |
| ! | GGAGGAGGCAAAATTGATTC+TGG | - | chr5.1:19783098-19783117 | MS.gene97742:intron | 45.0% |
| !! | ACTTAGTTCTGTCGCAACGA+TGG | - | chr5.1:19783849-19783868 | MS.gene97742:CDS | 45.0% |
| !! | CATGGCAATGCTGCTGATTT+AGG | - | chr5.1:19781927-19781946 | MS.gene97742:intron | 45.0% |
| !! | TGTTTGGTTCCGGTTTTTGG+AGG | - | chr5.1:19783080-19783099 | MS.gene97742:intron | 45.0% |
| !!! | CCCTTGCCATTTTCCATAGT+CGG | + | chr5.1:19785780-19785799 | None:intergenic | 45.0% |
| !!! | GGTCTCACCATTTTGGAACT+AGG | - | chr5.1:19785387-19785406 | MS.gene97742:intron | 45.0% |
| ACCGCCTCCTTTGATCCATA+AGG | + | chr5.1:19785815-19785834 | None:intergenic | 50.0% | |
| CCCTTATGGATCAAAGGAGG+CGG | - | chr5.1:19785811-19785830 | MS.gene97742:intron | 50.0% | |
| CCGCCTCCTTTGATCCATAA+GGG | + | chr5.1:19785814-19785833 | None:intergenic | 50.0% | |
| CGGCAACACTTGATACAGCT+AGG | + | chr5.1:19786159-19786178 | None:intergenic | 50.0% | |
| CTACACAGCGGCATTCTTTC+TGG | - | chr5.1:19784165-19784184 | MS.gene97742:intron | 50.0% | |
| CTAGGCCCCACATATAGTGT+TGG | - | chr5.1:19785405-19785424 | MS.gene97742:intron | 50.0% | |
| GGAGCCCAACACTATATGTG+GGG | + | chr5.1:19785413-19785432 | None:intergenic | 50.0% | |
| GGTTACATGGCAACCGACTA+TGG | - | chr5.1:19785764-19785783 | MS.gene97742:intron | 50.0% | |
| GTAAATGTACGCAGGCAGAC+AGG | + | chr5.1:19785058-19785077 | None:intergenic | 50.0% | |
| GTACAACATTGTCGGTCCAG+TGG | - | chr5.1:19785082-19785101 | MS.gene97742:intron | 50.0% | |
| GTGGAGCCCAACACTATATG+TGG | + | chr5.1:19785415-19785434 | None:intergenic | 50.0% | |
| GTGGTTACTCGAAATCACGG+TGG | + | chr5.1:19782538-19782557 | None:intergenic | 50.0% | |
| TACGGGCAATCAGTTGGAAG+TGG | - | chr5.1:19784093-19784112 | MS.gene97742:intron | 50.0% | |
| TCCCGCAGGTATGACTATTC+TGG | - | chr5.1:19783775-19783794 | MS.gene97742:CDS | 50.0% | |
| TCTGGATATGGTGCCTCTAC+CGG | - | chr5.1:19783793-19783812 | MS.gene97742:CDS | 50.0% | |
| TGTGGGGCCTAGTTCCAAAA+TGG | + | chr5.1:19785397-19785416 | None:intergenic | 50.0% | |
| TGTTTAGGGAAGACACCCTC+TGG | + | chr5.1:19782678-19782697 | None:intergenic | 50.0% | |
| TTAAGGCTTCTGGCACCAGA+GGG | - | chr5.1:19782660-19782679 | MS.gene97742:intron | 50.0% | |
| ! | CGGCAAGGTAGGCTTTTCTT+TGG | - | chr5.1:19783813-19783832 | MS.gene97742:CDS | 50.0% |
| ! | CTGCAGCAGCTAGAGCATTT+AGG | + | chr5.1:19786030-19786049 | None:intergenic | 50.0% |
| ! | GCACATGGGTCTCACCATTT+TGG | - | chr5.1:19785380-19785399 | MS.gene97742:intron | 50.0% |
| !! | AGCTGATACGTTGGTGGTGA+AGG | + | chr5.1:19781741-19781760 | None:intergenic | 50.0% |
| !! | TGATACGTTGGTGGTGAAGG+TGG | + | chr5.1:19781738-19781757 | None:intergenic | 50.0% |
| !! | TGATGATGGCAAACTCACGG+TGG | - | chr5.1:19781770-19781789 | MS.gene97742:CDS | 50.0% |
| !! | TTGGTTCCGGTTTTTGGAGG+AGG | - | chr5.1:19783083-19783102 | MS.gene97742:intron | 50.0% |
| AAAGCCTACCTTGCCGGTAG+AGG | + | chr5.1:19783809-19783828 | None:intergenic | 55.0% | |
| AGGATGAGGAATCGGAGACG+CGG | + | chr5.1:19781802-19781821 | None:intergenic | 55.0% | |
| ATATGGTGCCTCTACCGGCA+AGG | - | chr5.1:19783798-19783817 | MS.gene97742:CDS | 55.0% | |
| GCTAAGTTACCGAGGCTGAG+AGG | - | chr5.1:19784135-19784154 | MS.gene97742:intron | 55.0% | |
| GTTAAGGCTTCTGGCACCAG+AGG | - | chr5.1:19782659-19782678 | MS.gene97742:intron | 55.0% | |
| GTTTATGGGGATGGAGCCCT+TGG | - | chr5.1:19782968-19782987 | MS.gene97742:intron | 55.0% | |
| ! | AGAGGCGTGGTTCTACACAG+CGG | - | chr5.1:19784153-19784172 | MS.gene97742:intron | 55.0% |
| ACGCAGGCAGACAGGAGAGT+TGG | + | chr5.1:19785050-19785069 | None:intergenic | 60.0% | |
| AGAACCACGCCTCTCAGCCT+CGG | + | chr5.1:19784147-19784166 | None:intergenic | 60.0% | |
| ATGAGGAATCGGAGACGCGG+TGG | + | chr5.1:19781799-19781818 | None:intergenic | 60.0% | |
| GGTGCCTCTACCGGCAAGGT+AGG | - | chr5.1:19783802-19783821 | MS.gene97742:CDS | 65.0% | |
| GTTACCGAGGCTGAGAGGCG+TGG | - | chr5.1:19784140-19784159 | MS.gene97742:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 19781690 | 19786306 | 19781690 | ID=MS.gene97742 |
| chr5.1 | mRNA | 19781690 | 19786306 | 19781690 | ID=MS.gene97742.t1;Parent=MS.gene97742 |
| chr5.1 | exon | 19785990 | 19786306 | 19785990 | ID=MS.gene97742.t1.exon1;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19785990 | 19786306 | 19785990 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| chr5.1 | exon | 19784177 | 19784213 | 19784177 | ID=MS.gene97742.t1.exon2;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19784177 | 19784213 | 19784177 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| chr5.1 | exon | 19783757 | 19783993 | 19783757 | ID=MS.gene97742.t1.exon3;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19783757 | 19783993 | 19783757 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| chr5.1 | exon | 19783328 | 19783375 | 19783328 | ID=MS.gene97742.t1.exon4;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19783328 | 19783375 | 19783328 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| chr5.1 | exon | 19782017 | 19782257 | 19782017 | ID=MS.gene97742.t1.exon5;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19782017 | 19782257 | 19782017 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| chr5.1 | exon | 19781690 | 19781835 | 19781690 | ID=MS.gene97742.t1.exon6;Parent=MS.gene97742.t1 |
| chr5.1 | CDS | 19781690 | 19781835 | 19781690 | ID=cds.MS.gene97742.t1;Parent=MS.gene97742.t1 |
| Gene Sequence |
| Protein sequence |
