Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97819.t1 | XP_013459094.1 | 94.8 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 2.40E-139 | 505 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97819.t1 | Q2V3H0 | 62.5 | 264 | 88 | 3 | 20 | 272 | 18 | 281 | 1.2e-83 | 311.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97819.t1 | A0A072UU22 | 94.8 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 1.7e-139 | 505.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene97819 | 0.844571 | 6.96E-59 | -1.69E-46 |
| MS.gene050226 | MS.gene97819 | 0.803004 | 4.29E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene97819 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene97819 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene050330 | MS.gene97819 | -0.809267 | 2.06E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene97819 | 0.80726 | 5.51E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene97819 | -0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene97819 | 0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene97819 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene97819 | 0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene97819 | 0.809065 | 2.27E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene97819 | 0.80169 | 7.99E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene97819 | 0.83713 | 6.23E-57 | -1.69E-46 |
| MS.gene054184 | MS.gene97819 | 0.815315 | 9.85E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene97819 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene97819 | 0.802833 | 4.65E-49 | -1.69E-46 |
| MS.gene055133 | MS.gene97819 | 0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene97819 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene055509 | MS.gene97819 | 0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene056069 | MS.gene97819 | -0.831407 | 1.70E-55 | -1.69E-46 |
| MS.gene057260 | MS.gene97819 | 0.803397 | 3.55E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene97819 | 0.811644 | 6.32E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene97819 | 0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene97819 | 0.81444 | 1.54E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene97819 | 0.823441 | 1.38E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene97819 | 0.837939 | 3.87E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97819.t1 | MTR_3g024400 | 94.834 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 0.0 | 503 |
| MS.gene97819.t1 | MTR_3g024400 | 78.229 | 271 | 11 | 1 | 1 | 271 | 1 | 223 | 2.68e-137 | 387 |
| MS.gene97819.t1 | MTR_6g053090 | 47.959 | 196 | 101 | 1 | 76 | 271 | 92 | 286 | 1.60e-53 | 178 |
| MS.gene97819.t1 | MTR_5g012120 | 43.871 | 155 | 86 | 1 | 101 | 254 | 5 | 159 | 8.18e-39 | 135 |
| MS.gene97819.t1 | MTR_5g012120 | 42.771 | 166 | 93 | 2 | 90 | 254 | 72 | 236 | 1.83e-38 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97819.t1 | AT4G18975 | 62.500 | 264 | 88 | 3 | 20 | 272 | 18 | 281 | 7.59e-115 | 333 |
| MS.gene97819.t1 | AT4G18975 | 62.500 | 264 | 88 | 3 | 20 | 272 | 18 | 281 | 7.59e-115 | 333 |
| MS.gene97819.t1 | AT4G18975 | 62.500 | 264 | 88 | 3 | 20 | 272 | 18 | 281 | 7.59e-115 | 333 |
| MS.gene97819.t1 | AT4G18975 | 73.786 | 206 | 54 | 0 | 67 | 272 | 49 | 254 | 4.52e-114 | 330 |
| MS.gene97819.t1 | AT4G21190 | 44.390 | 205 | 111 | 2 | 76 | 277 | 45 | 249 | 4.01e-53 | 176 |
| MS.gene97819.t1 | AT1G04590 | 35.681 | 213 | 135 | 2 | 44 | 254 | 100 | 312 | 8.48e-37 | 135 |
| MS.gene97819.t1 | AT1G04590 | 35.648 | 216 | 134 | 3 | 44 | 254 | 100 | 315 | 3.25e-35 | 131 |
Find 69 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAATATACTTCCATTTA+AGG | 0.114121 | 3.4:+17061722 | None:intergenic |
| ACTTCTTCTGGCATTTGATA+TGG | 0.235335 | 3.4:-17062349 | MS.gene97819:CDS |
| AATGAGAAAGAGGCTGTTTA+TGG | 0.250949 | 3.4:-17063210 | MS.gene97819:CDS |
| ATTGAGCTTTCAATTGTTAT+AGG | 0.253274 | 3.4:+17066259 | None:intergenic |
| TAAACAGCCTCTTTCTCATT+AGG | 0.256749 | 3.4:+17063213 | None:intergenic |
| ATGTCCTTCGTAGGAGTATT+GGG | 0.290776 | 3.4:+17066230 | None:intergenic |
| TCAAACGATATGGCCTTAAA+TGG | 0.299839 | 3.4:-17061735 | MS.gene97819:CDS |
| GCAGATGACAAGAATTTATT+CGG | 0.331283 | 3.4:+17066099 | None:intergenic |
| CCAAGAAGAGAAAAGGAAAT+TGG | 0.335972 | 3.4:-17061761 | MS.gene97819:CDS |
| AAACAGCCTCTTTCTCATTA+GGG | 0.352186 | 3.4:+17063214 | None:intergenic |
| TTTCGACCCGACAACTTTGC+AGG | 0.364803 | 3.4:+17065944 | None:intergenic |
| TGACAAGAGTGAGTGCCTTT+TGG | 0.368397 | 3.4:+17065722 | None:intergenic |
| TTCCTGACTGTATCTTCATC+AGG | 0.368904 | 3.4:+17061811 | None:intergenic |
| TGCAGACATGGAAGAGTTGC+GGG | 0.371697 | 3.4:-17061839 | MS.gene97819:CDS |
| AACATACGACACACTTCTTC+TGG | 0.373920 | 3.4:-17062361 | MS.gene97819:CDS |
| CATGTCCTTCGTAGGAGTAT+TGG | 0.390457 | 3.4:+17066229 | None:intergenic |
| GCCTTAGCTACTGCAATCAA+TGG | 0.402188 | 3.4:+17063150 | None:intergenic |
| AAATTGGTAATCAAACGATA+TGG | 0.420660 | 3.4:-17061745 | MS.gene97819:CDS |
| TTTATGGAGCGTTAGACAAA+TGG | 0.429545 | 3.4:-17063194 | MS.gene97819:CDS |
| CGTTAGACAAATGGACGGCC+TGG | 0.441130 | 3.4:-17063185 | MS.gene97819:CDS |
| TTCGTTAAAGTTGAGTCGAT+TGG | 0.448565 | 3.4:-17061523 | MS.gene97819:CDS |
| TCGTTAAAGTTGAGTCGATT+GGG | 0.457325 | 3.4:-17061522 | MS.gene97819:CDS |
| CCCATTGATTGCAGTAGCTA+AGG | 0.457671 | 3.4:-17063151 | MS.gene97819:CDS |
| TGGAAGTATATTCACTTCAA+TGG | 0.460351 | 3.4:-17061715 | MS.gene97819:CDS |
| AACTAGGCCAAGAAGAGAAA+AGG | 0.461313 | 3.4:-17061768 | MS.gene97819:CDS |
| AATCTCTTCTTTGCCACAAG+TGG | 0.463410 | 3.4:+17065758 | None:intergenic |
| TATTCACTTCAATGGTGAAC+GGG | 0.477233 | 3.4:-17061707 | MS.gene97819:intron |
| GTATCTCCTGCAAAGTTGTC+GGG | 0.479467 | 3.4:-17065950 | MS.gene97819:CDS |
| TTCAGCTCAGTCTGGCCAAA+AGG | 0.481114 | 3.4:-17065737 | MS.gene97819:CDS |
| AAAGGACAAGGAGCAACAAT+GGG | 0.484217 | 3.4:-17062384 | MS.gene97819:CDS |
| GGTTCTCGGGAAACGAAGTC+GGG | 0.487552 | 3.4:+17061495 | None:intergenic |
| TCCTTTGCTCAACATCCACT+TGG | 0.488600 | 3.4:+17062401 | None:intergenic |
| ACAGAACCACCAACAACATT+CGG | 0.497678 | 3.4:+17065915 | None:intergenic |
| ACTCCTACGAAGGACATGTT+TGG | 0.501980 | 3.4:-17066224 | MS.gene97819:intron |
| TGTATCTCCTGCAAAGTTGT+CGG | 0.502495 | 3.4:-17065951 | MS.gene97819:CDS |
| TGGTTCTCGGGAAACGAAGT+CGG | 0.507284 | 3.4:+17061494 | None:intergenic |
| AGAAGAGATTCAGCTCAGTC+TGG | 0.512118 | 3.4:-17065745 | MS.gene97819:CDS |
| GTTAGACAAATGGACGGCCT+GGG | 0.515804 | 3.4:-17063184 | MS.gene97819:CDS |
| GCAAGTGCCTTTAGAAAACT+AGG | 0.517052 | 3.4:-17061784 | MS.gene97819:CDS |
| AAATTGAGTCCGAATGTTGT+TGG | 0.519100 | 3.4:-17065924 | MS.gene97819:CDS |
| TGAACTCCCTAATGAGAAAG+AGG | 0.519498 | 3.4:-17063220 | MS.gene97819:CDS |
| CTTAAGGAAAAGGGCTCAGT+GGG | 0.521402 | 3.4:-17063118 | MS.gene97819:CDS |
| CAAAGGACAAGGAGCAACAA+TGG | 0.533105 | 3.4:-17062385 | MS.gene97819:CDS |
| CCTTAGCTACTGCAATCAAT+GGG | 0.533642 | 3.4:+17063151 | None:intergenic |
| TGTTGGTGGTTCTGTTGAGA+AGG | 0.534069 | 3.4:-17065907 | MS.gene97819:CDS |
| TCTGCCAGATAAAATTATAG+AGG | 0.547684 | 3.4:-17062214 | MS.gene97819:intron |
| AGTTTAGGTATTTGCAGACA+TGG | 0.549972 | 3.4:-17061851 | MS.gene97819:intron |
| TCTTAGACACAGAGCGCATG+TGG | 0.553949 | 3.4:+17062277 | None:intergenic |
| AACCTGATGAAGATACAGTC+AGG | 0.560887 | 3.4:-17061813 | MS.gene97819:CDS |
| CAATGGGAACTCTATTTCCC+AGG | 0.564369 | 3.4:+17063167 | None:intergenic |
| TTGCAGACATGGAAGAGTTG+CGG | 0.564389 | 3.4:-17061840 | MS.gene97819:CDS |
| TTGAGTCCGAATGTTGTTGG+TGG | 0.569060 | 3.4:-17065921 | MS.gene97819:CDS |
| TGCAATAAGTATCACTCCGA+AGG | 0.572258 | 3.4:-17066079 | MS.gene97819:intron |
| TTTCCCCAATACTCCTACGA+AGG | 0.587315 | 3.4:-17066234 | MS.gene97819:CDS |
| AATCAAAGGGTCGAGTGCAA+AGG | 0.592567 | 3.4:-17061557 | MS.gene97819:intron |
| TGAAGATACAGTCAGGAAAG+TGG | 0.595011 | 3.4:-17061806 | MS.gene97819:CDS |
| ATATTCACTTCAATGGTGAA+CGG | 0.595717 | 3.4:-17061708 | MS.gene97819:CDS |
| TATGGAACAGAGAGTAGATG+AGG | 0.602182 | 3.4:-17062331 | MS.gene97819:CDS |
| TATACTTTCAGTTAGCCAAG+TGG | 0.620511 | 3.4:-17062416 | MS.gene97819:intron |
| TAGATGAGGCAGAATCCTTG+TGG | 0.623540 | 3.4:-17062317 | MS.gene97819:CDS |
| TCTTAAGGAAAAGGGCTCAG+TGG | 0.626223 | 3.4:-17063119 | MS.gene97819:CDS |
| GCCAAGTGGATGTTGAGCAA+AGG | 0.633935 | 3.4:-17062402 | MS.gene97819:CDS |
| TGGATGTTGAGCAAAGGACA+AGG | 0.634699 | 3.4:-17062396 | MS.gene97819:CDS |
| GTAAGATAGAACACCACTTG+TGG | 0.639683 | 3.4:-17065771 | MS.gene97819:CDS |
| TTACCAAACATGTCCTTCGT+AGG | 0.651049 | 3.4:+17066221 | None:intergenic |
| TGTCCTTCGTAGGAGTATTG+GGG | 0.658780 | 3.4:+17066231 | None:intergenic |
| ATGTATAATCATATTCCACA+AGG | 0.667188 | 3.4:+17062302 | None:intergenic |
| TGGAGCGTTAGACAAATGGA+CGG | 0.671710 | 3.4:-17063190 | MS.gene97819:CDS |
| CTTAGACACAGAGCGCATGT+GGG | 0.683166 | 3.4:+17062278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAATCTGATAAAAATT+TGG | - | chr3.4:17065697-17065716 | MS.gene97819:intron | 10.0% |
| !! | TGTGAATAAAAATGAAAAAA+GGG | + | chr3.4:17062069-17062088 | None:intergenic | 15.0% |
| !! | TTGTGAATAAAAATGAAAAA+AGG | + | chr3.4:17062070-17062089 | None:intergenic | 15.0% |
| !! | TTTAAAAATCTTAAGGAAAA+GGG | - | chr3.4:17064620-17064639 | MS.gene97819:intron | 15.0% |
| !!! | TGCTTTATTTATAACATATA+TGG | - | chr3.4:17064905-17064924 | MS.gene97819:intron | 15.0% |
| !! | AATAAAAATGAAAAAAGGGT+AGG | + | chr3.4:17062065-17062084 | None:intergenic | 20.0% |
| !! | AGATTTATTTAATACAAGGA+TGG | - | chr3.4:17063996-17064015 | MS.gene97819:intron | 20.0% |
| !! | ATATGAAATTCATGAATTCA+TGG | - | chr3.4:17065226-17065245 | MS.gene97819:intron | 20.0% |
| !! | ATTATGAATGACATTGAAAT+CGG | - | chr3.4:17066094-17066113 | MS.gene97819:CDS | 20.0% |
| !! | ATTTAATAGCTAATACTACA+TGG | + | chr3.4:17062596-17062615 | None:intergenic | 20.0% |
| !! | GATTAAAAAGTTTCTGATTT+GGG | - | chr3.4:17063166-17063185 | MS.gene97819:CDS | 20.0% |
| !! | GCTAAGATTTATTTAATACA+AGG | - | chr3.4:17063992-17064011 | MS.gene97819:intron | 20.0% |
| !! | TAAGATTAAACAGTAAAAGA+AGG | + | chr3.4:17063115-17063134 | None:intergenic | 20.0% |
| !! | TATAAAGAAAGCTAATTTAC+TGG | + | chr3.4:17064327-17064346 | None:intergenic | 20.0% |
| !! | TGATTAAAAAGTTTCTGATT+TGG | - | chr3.4:17063165-17063184 | MS.gene97819:CDS | 20.0% |
| !! | TTATCATCAATGTGATTAAT+AGG | - | chr3.4:17062353-17062372 | MS.gene97819:CDS | 20.0% |
| !! | TTTATAACATATATGGTTTG+AGG | - | chr3.4:17064912-17064931 | MS.gene97819:intron | 20.0% |
| !!! | AAATGTTGTTTCAACTTTTA+TGG | - | chr3.4:17064970-17064989 | MS.gene97819:intron | 20.0% |
| !!! | AAATTAGCTTTCTTTATATC+TGG | - | chr3.4:17064329-17064348 | MS.gene97819:intron | 20.0% |
| !!! | CTTTAAAAATCTTAAGGAAA+AGG | - | chr3.4:17064619-17064638 | MS.gene97819:intron | 20.0% |
| ! | AACTATACCAGAATTTGATA+TGG | - | chr3.4:17062721-17062740 | MS.gene97819:intron | 25.0% |
| ! | AGTGAATATACTTCCATTTA+AGG | + | chr3.4:17066028-17066047 | None:intergenic | 25.0% |
| ! | ATAAGTACTTAAATCCAAAC+TGG | + | chr3.4:17064998-17065017 | None:intergenic | 25.0% |
| ! | ATGCTGTAATGTAAAAAAAG+AGG | - | chr3.4:17064289-17064308 | MS.gene97819:intron | 25.0% |
| ! | ATGTATAATCATATTCCACA+AGG | + | chr3.4:17065448-17065467 | None:intergenic | 25.0% |
| ! | ATTCAAGCATATATTGCAAA+AGG | + | chr3.4:17064271-17064290 | None:intergenic | 25.0% |
| ! | ATTGAGCTTTCAATTGTTAT+AGG | + | chr3.4:17061491-17061510 | None:intergenic | 25.0% |
| ! | GAATGGTTATATTAAACAGT+AGG | + | chr3.4:17062321-17062340 | None:intergenic | 25.0% |
| ! | GATAATAATGCTTTCTTGAA+TGG | + | chr3.4:17062338-17062357 | None:intergenic | 25.0% |
| ! | TAAAATGAATGATTGTTTGC+TGG | - | chr3.4:17064829-17064848 | MS.gene97819:intron | 25.0% |
| ! | TAAACACTAAAGGAGAATAT+TGG | + | chr3.4:17063912-17063931 | None:intergenic | 25.0% |
| ! | TCTATCACTAAAAATCTCAT+TGG | + | chr3.4:17063387-17063406 | None:intergenic | 25.0% |
| ! | TTTATCACACATCTTAGAAT+TGG | - | chr3.4:17065185-17065204 | MS.gene97819:intron | 25.0% |
| ! | TTTATCTTCTAATGTGTGTT+TGG | - | chr3.4:17061897-17061916 | MS.gene97819:intron | 25.0% |
| !! | AAATTGGTAATCAAACGATA+TGG | - | chr3.4:17066002-17066021 | MS.gene97819:intron | 25.0% |
| !! | ATCATGAGAAGGTAATTTTA+TGG | + | chr3.4:17064744-17064763 | None:intergenic | 25.0% |
| !! | ATTCGCTGTTAAACAAATTT+TGG | - | chr3.4:17063279-17063298 | MS.gene97819:intron | 25.0% |
| !! | CAATCATTCATTTTATGAGA+AGG | + | chr3.4:17064824-17064843 | None:intergenic | 25.0% |
| !! | GATACCTCTATAATTTTATC+TGG | + | chr3.4:17065540-17065559 | None:intergenic | 25.0% |
| !! | TAAATGTTTTGTCAAATGTC+AGG | + | chr3.4:17063312-17063331 | None:intergenic | 25.0% |
| !! | TACACTGTTATTTACTACAT+CGG | + | chr3.4:17062688-17062707 | None:intergenic | 25.0% |
| !! | TGTGAATAATCTGTTTTATG+TGG | - | chr3.4:17061923-17061942 | MS.gene97819:intron | 25.0% |
| !! | TTGCTATGTTGAGTTAATTT+TGG | - | chr3.4:17064470-17064489 | MS.gene97819:intron | 25.0% |
| !! | TTTTAATCAAATTCCAGGTT+GGG | + | chr3.4:17062458-17062477 | None:intergenic | 25.0% |
| !!! | AACAGCTTTAGGATTATATA+TGG | - | chr3.4:17062957-17062976 | MS.gene97819:intron | 25.0% |
| !!! | CTAAGGCTTTAAAAATCTTA+AGG | - | chr3.4:17064613-17064632 | MS.gene97819:intron | 25.0% |
| !!! | GTTAAACAAATTTTGGTGAT+TGG | - | chr3.4:17063286-17063305 | MS.gene97819:intron | 25.0% |
| !!! | TATAGAGGTATCTCTTTTAT+AGG | - | chr3.4:17065548-17065567 | MS.gene97819:intron | 25.0% |
| AAAAGGGAAGAAGAAAAAAG+GGG | - | chr3.4:17061953-17061972 | MS.gene97819:intron | 30.0% | |
| AAAGTGATAGAAACAGCTTT+AGG | - | chr3.4:17062946-17062965 | MS.gene97819:intron | 30.0% | |
| AAATCAAATAGAGTCGTGTA+TGG | + | chr3.4:17062246-17062265 | None:intergenic | 30.0% | |
| AAGGCTCTTCAAACATATTA+GGG | + | chr3.4:17063096-17063115 | None:intergenic | 30.0% | |
| AATGTTAATCTTGCCTAGAT+TGG | - | chr3.4:17063530-17063549 | MS.gene97819:intron | 30.0% | |
| AATTGTGGTCAAGATTCATT+GGG | + | chr3.4:17063873-17063892 | None:intergenic | 30.0% | |
| ACTGTTTGATCAAGATCTAA+CGG | - | chr3.4:17065655-17065674 | MS.gene97819:intron | 30.0% | |
| AGAAAAGGGAAGAAGAAAAA+AGG | - | chr3.4:17061951-17061970 | MS.gene97819:intron | 30.0% | |
| AGAATTTGATATGGTCTCAT+AGG | - | chr3.4:17062730-17062749 | MS.gene97819:intron | 30.0% | |
| AGTCTTCTGCATAATATTCT+CGG | + | chr3.4:17064040-17064059 | None:intergenic | 30.0% | |
| ATATTCACTTCAATGGTGAA+CGG | - | chr3.4:17066039-17066058 | MS.gene97819:intron | 30.0% | |
| CTAAACAATGTTCATGTTGA+TGG | + | chr3.4:17065088-17065107 | None:intergenic | 30.0% | |
| CTGATGGAATAATGAATGTT+AGG | - | chr3.4:17063716-17063735 | MS.gene97819:intron | 30.0% | |
| GAAAAGGGAAGAAGAAAAAA+GGG | - | chr3.4:17061952-17061971 | MS.gene97819:intron | 30.0% | |
| GAAAATCTTATAGCAGGTAA+AGG | - | chr3.4:17062560-17062579 | MS.gene97819:intron | 30.0% | |
| GATGTAGTAAATAACAGTGT+AGG | - | chr3.4:17062687-17062706 | MS.gene97819:intron | 30.0% | |
| GCAGATGACAAGAATTTATT+CGG | + | chr3.4:17061651-17061670 | None:intergenic | 30.0% | |
| GCTATCTTGTATGTAAGTTT+AGG | - | chr3.4:17065881-17065900 | MS.gene97819:intron | 30.0% | |
| GGAAAAAAGATATCATGAGA+AGG | + | chr3.4:17064755-17064774 | None:intergenic | 30.0% | |
| GTCTATTGTGAATCTTGAAA+TGG | - | chr3.4:17064496-17064515 | MS.gene97819:intron | 30.0% | |
| TAATTGTGGTCAAGATTCAT+TGG | + | chr3.4:17063874-17063893 | None:intergenic | 30.0% | |
| TAGATTTCATAGCTGCATTA+CGG | - | chr3.4:17062625-17062644 | MS.gene97819:intron | 30.0% | |
| TATGAGACCATATCAAATTC+TGG | + | chr3.4:17062731-17062750 | None:intergenic | 30.0% | |
| TCTGCCAGATAAAATTATAG+AGG | - | chr3.4:17065533-17065552 | MS.gene97819:intron | 30.0% | |
| TGAAGCAATTGTTATACCTT+CGG | + | chr3.4:17061687-17061706 | None:intergenic | 30.0% | |
| TGGAAGATGTTAAACACTAA+AGG | + | chr3.4:17063922-17063941 | None:intergenic | 30.0% | |
| TTATCCCATACTTATCAACT+TGG | + | chr3.4:17062919-17062938 | None:intergenic | 30.0% | |
| TTTATGTGGAATGCAGAAAA+GGG | - | chr3.4:17061937-17061956 | MS.gene97819:intron | 30.0% | |
| ! | AATTTTCTTGTATTCGAGTC+CGG | + | chr3.4:17064366-17064385 | None:intergenic | 30.0% |
| ! | ATTACGGTGCTAAAAGATTA+AGG | - | chr3.4:17062641-17062660 | MS.gene97819:intron | 30.0% |
| ! | TCGTGCTATTGTTATTAACT+GGG | - | chr3.4:17064213-17064232 | MS.gene97819:intron | 30.0% |
| ! | TCTAAGATGTGTGATAAATC+TGG | + | chr3.4:17065183-17065202 | None:intergenic | 30.0% |
| ! | TCTCTTTTATAGGAATGTAG+AGG | - | chr3.4:17065558-17065577 | MS.gene97819:intron | 30.0% |
| ! | TGATTAAAACCCTTTTGAAC+CGG | - | chr3.4:17062469-17062488 | MS.gene97819:intron | 30.0% |
| ! | TGGAAGTATATTCACTTCAA+TGG | - | chr3.4:17066032-17066051 | MS.gene97819:intron | 30.0% |
| ! | TTAGCTTTCTTTATATCTGG+AGG | - | chr3.4:17064332-17064351 | MS.gene97819:intron | 30.0% |
| ! | TTCGAGTGAACTATTCTTTT+AGG | - | chr3.4:17063968-17063987 | MS.gene97819:intron | 30.0% |
| ! | TTTTATGTGGAATGCAGAAA+AGG | - | chr3.4:17061936-17061955 | MS.gene97819:intron | 30.0% |
| !! | AAGGGTTTTAATCAAATTCC+AGG | + | chr3.4:17062463-17062482 | None:intergenic | 30.0% |
| !! | ACACAAGTTCTAGAAAATAG+TGG | + | chr3.4:17064678-17064697 | None:intergenic | 30.0% |
| !! | ATCACTAAGAGAGTTAGTTT+TGG | - | chr3.4:17064135-17064154 | MS.gene97819:intron | 30.0% |
| !! | GTTTTAATCAAATTCCAGGT+TGG | + | chr3.4:17062459-17062478 | None:intergenic | 30.0% |
| !!! | TAGGAATGTAGAGGTATTTT+TGG | - | chr3.4:17065567-17065586 | MS.gene97819:intron | 30.0% |
| !!! | TGCATGAGTTTTGACTTTTT+TGG | - | chr3.4:17065152-17065171 | MS.gene97819:intron | 30.0% |
| !!! | TGGCCACTCAATAATTTTTT+GGG | + | chr3.4:17064093-17064112 | None:intergenic | 30.0% |
| !!! | TTTTTTCCGTACATTACATG+TGG | - | chr3.4:17064767-17064786 | MS.gene97819:intron | 30.0% |
| AAAAATTATTGAGTGGCCAG+TGG | - | chr3.4:17064094-17064113 | MS.gene97819:intron | 35.0% | |
| AAAATTATTGAGTGGCCAGT+GGG | - | chr3.4:17064095-17064114 | MS.gene97819:intron | 35.0% | |
| AAACAGCCTCTTTCTCATTA+GGG | + | chr3.4:17064536-17064555 | None:intergenic | 35.0% | |
| AAAGGGAAGAAGAAAAAAGG+GGG | - | chr3.4:17061954-17061973 | MS.gene97819:intron | 35.0% | |
| AAATAACAGTGTAGGATACG+CGG | - | chr3.4:17062695-17062714 | MS.gene97819:intron | 35.0% | |
| AAATTGAGTCCGAATGTTGT+TGG | - | chr3.4:17061823-17061842 | MS.gene97819:CDS | 35.0% | |
| AACAAAGCCGATGAATTAGA+TGG | - | chr3.4:17062820-17062839 | MS.gene97819:intron | 35.0% | |
| AACAGCGAATCAGATCAATA+TGG | + | chr3.4:17063269-17063288 | None:intergenic | 35.0% | |
| AATGAGAAAGAGGCTGTTTA+TGG | - | chr3.4:17064537-17064556 | MS.gene97819:intron | 35.0% | |
| ACCGAAAAATCAAGATCGAA+TGG | + | chr3.4:17065730-17065749 | None:intergenic | 35.0% | |
| ACTTCTTCTGGCATTTGATA+TGG | - | chr3.4:17065398-17065417 | MS.gene97819:intron | 35.0% | |
| AGACTCTAGATTTGATTGAG+AGG | - | chr3.4:17062849-17062868 | MS.gene97819:intron | 35.0% | |
| AGGCTCTTCAAACATATTAG+GGG | + | chr3.4:17063095-17063114 | None:intergenic | 35.0% | |
| AGTTTAGGTATTTGCAGACA+TGG | - | chr3.4:17065896-17065915 | MS.gene97819:intron | 35.0% | |
| ATATGGTCTCATAGGATGAA+TGG | - | chr3.4:17062738-17062757 | MS.gene97819:intron | 35.0% | |
| ATCTAGATTCCATGCAATCA+GGG | + | chr3.4:17065785-17065804 | None:intergenic | 35.0% | |
| ATGAAGACAATTAGTGTGTG+TGG | - | chr3.4:17063189-17063208 | MS.gene97819:CDS | 35.0% | |
| ATGAGCACATACAAGTTAGA+TGG | - | chr3.4:17062118-17062137 | MS.gene97819:intron | 35.0% | |
| ATTAATGTTGCTGCTGATGT+TGG | - | chr3.4:17063786-17063805 | MS.gene97819:intron | 35.0% | |
| CATAATATTCTCGGACTCAA+AGG | + | chr3.4:17064031-17064050 | None:intergenic | 35.0% | |
| CCAAGAAGAGAAAAGGAAAT+TGG | - | chr3.4:17065986-17066005 | MS.gene97819:intron | 35.0% | |
| CCAATGGAAAATCTTATAGC+AGG | - | chr3.4:17062554-17062573 | MS.gene97819:intron | 35.0% | |
| GAAGGCTCTTCAAACATATT+AGG | + | chr3.4:17063097-17063116 | None:intergenic | 35.0% | |
| GACCCCAAAAAATTATTGAG+TGG | - | chr3.4:17064087-17064106 | MS.gene97819:intron | 35.0% | |
| GACTCTAGATTTGATTGAGA+GGG | - | chr3.4:17062850-17062869 | MS.gene97819:intron | 35.0% | |
| GCTGTGAAACAGTTACTATT+CGG | + | chr3.4:17062412-17062431 | None:intergenic | 35.0% | |
| GGAATGGTTAGAATCTCAAT+TGG | - | chr3.4:17065295-17065314 | MS.gene97819:intron | 35.0% | |
| GGAGAAATTTGTCAGGAAAA+TGG | - | chr3.4:17062871-17062890 | MS.gene97819:intron | 35.0% | |
| TAAACAGCCTCTTTCTCATT+AGG | + | chr3.4:17064537-17064556 | None:intergenic | 35.0% | |
| TAATACTACATGGACTTCAG+AGG | + | chr3.4:17062586-17062605 | None:intergenic | 35.0% | |
| TAGAGATAGATCACACTAAC+TGG | - | chr3.4:17062159-17062178 | MS.gene97819:intron | 35.0% | |
| TAGATCTTGATCAAACAGTC+TGG | + | chr3.4:17065654-17065673 | None:intergenic | 35.0% | |
| TATACTTTCAGTTAGCCAAG+TGG | - | chr3.4:17065331-17065350 | MS.gene97819:intron | 35.0% | |
| TATTCACTTCAATGGTGAAC+GGG | - | chr3.4:17066040-17066059 | MS.gene97819:intron | 35.0% | |
| TCGTTAAAGTTGAGTCGATT+GGG | - | chr3.4:17066225-17066244 | MS.gene97819:CDS | 35.0% | |
| TCTGCGAGAAAAGAAGATAA+GGG | + | chr3.4:17061623-17061642 | None:intergenic | 35.0% | |
| TGCAAATTGTAACCACTCAA+TGG | + | chr3.4:17063506-17063525 | None:intergenic | 35.0% | |
| TTCGTTAAAGTTGAGTCGAT+TGG | - | chr3.4:17066224-17066243 | MS.gene97819:intron | 35.0% | |
| TTCTGTTGAGAAGGATAAGT+AGG | - | chr3.4:17061849-17061868 | MS.gene97819:intron | 35.0% | |
| TTGTAACCACTCAATGGTTA+AGG | + | chr3.4:17063500-17063519 | None:intergenic | 35.0% | |
| ! | ACAATGTTCATGTTGATGGA+TGG | + | chr3.4:17065084-17065103 | None:intergenic | 35.0% |
| ! | AGAAGGTAATTTTATAGCCC+TGG | + | chr3.4:17064807-17064826 | None:intergenic | 35.0% |
| ! | CCAATTTCCTTTTCTCTTCT+TGG | + | chr3.4:17065989-17066008 | None:intergenic | 35.0% |
| ! | CCTGCTATAAGATTTTCCAT+TGG | + | chr3.4:17062557-17062576 | None:intergenic | 35.0% |
| ! | GAAGGTAATTTTATAGCCCT+GGG | + | chr3.4:17064806-17064825 | None:intergenic | 35.0% |
| ! | GCCATTCGATCTTGATTTTT+CGG | - | chr3.4:17065726-17065745 | MS.gene97819:CDS | 35.0% |
| ! | GTCGTGCTATTGTTATTAAC+TGG | - | chr3.4:17064212-17064231 | MS.gene97819:intron | 35.0% |
| ! | TCAAACGATATGGCCTTAAA+TGG | - | chr3.4:17066012-17066031 | MS.gene97819:intron | 35.0% |
| ! | TTTATGGAGCGTTAGACAAA+TGG | - | chr3.4:17064553-17064572 | MS.gene97819:intron | 35.0% |
| !! | ATTGGCCAAGTTGATAAGTA+TGG | - | chr3.4:17062911-17062930 | MS.gene97819:intron | 35.0% |
| !! | CATAGGATGAATGGATTTTC+CGG | - | chr3.4:17062747-17062766 | MS.gene97819:intron | 35.0% |
| !! | GAATAGCTGTATTCTAAAGC+AGG | - | chr3.4:17063752-17063771 | MS.gene97819:intron | 35.0% |
| !! | TAATTCATCGGCTTTGTTCA+TGG | + | chr3.4:17062818-17062837 | None:intergenic | 35.0% |
| !! | TGTTGGTTTCTAGCAGAATA+AGG | - | chr3.4:17062985-17063004 | MS.gene97819:intron | 35.0% |
| !! | TTCTTGGCCTAGTTTTCTAA+AGG | + | chr3.4:17065973-17065992 | None:intergenic | 35.0% |
| !! | TTGGCCAAGTTGATAAGTAT+GGG | - | chr3.4:17062912-17062931 | MS.gene97819:intron | 35.0% |
| !!! | AGTTTTGGTTGCAGGATTTT+AGG | - | chr3.4:17064150-17064169 | MS.gene97819:intron | 35.0% |
| !!! | ATATCTGGAGGTTACTTTTC+CGG | - | chr3.4:17064344-17064363 | MS.gene97819:intron | 35.0% |
| !!! | CTGGCCACTCAATAATTTTT+TGG | + | chr3.4:17064094-17064113 | None:intergenic | 35.0% |
| !!! | GGCCACTCAATAATTTTTTG+GGG | + | chr3.4:17064092-17064111 | None:intergenic | 35.0% |
| AAAGGACAAGGAGCAACAAT+GGG | - | chr3.4:17065363-17065382 | MS.gene97819:intron | 40.0% | |
| AAAGTAACATGTATCCCCAC+AGG | - | chr3.4:17063226-17063245 | MS.gene97819:CDS | 40.0% | |
| AAATTATTGAGTGGCCAGTG+GGG | - | chr3.4:17064096-17064115 | MS.gene97819:intron | 40.0% | |
| AACAACACGTTCTCCTGATA+AGG | + | chr3.4:17064414-17064433 | None:intergenic | 40.0% | |
| AACATACGACACACTTCTTC+TGG | - | chr3.4:17065386-17065405 | MS.gene97819:intron | 40.0% | |
| AACCTGATGAAGATACAGTC+AGG | - | chr3.4:17065934-17065953 | MS.gene97819:CDS | 40.0% | |
| AACTAGGCCAAGAAGAGAAA+AGG | - | chr3.4:17065979-17065998 | MS.gene97819:intron | 40.0% | |
| AATATTGGTACCCACTTCTC+TGG | + | chr3.4:17063897-17063916 | None:intergenic | 40.0% | |
| AATCTCTTCTTTGCCACAAG+TGG | + | chr3.4:17061992-17062011 | None:intergenic | 40.0% | |
| ACAACACGTTCTCCTGATAA+GGG | + | chr3.4:17064413-17064432 | None:intergenic | 40.0% | |
| ACAGAACCACCAACAACATT+CGG | + | chr3.4:17061835-17061854 | None:intergenic | 40.0% | |
| ACCACAATTACCAGAGAAGT+GGG | - | chr3.4:17063884-17063903 | MS.gene97819:intron | 40.0% | |
| AGAATGGAAAGAGGACAGTA+AGG | - | chr3.4:17063445-17063464 | MS.gene97819:intron | 40.0% | |
| AGATCAATATGGACTCTTCC+TGG | + | chr3.4:17063258-17063277 | None:intergenic | 40.0% | |
| ATAGTTCACTCGAACAGTAC+AGG | + | chr3.4:17063962-17063981 | None:intergenic | 40.0% | |
| ATTCTGCTAGAAACCAACAG+CGG | + | chr3.4:17062984-17063003 | None:intergenic | 40.0% | |
| CCATAAACAAGTACAAAGCC+AGG | + | chr3.4:17062495-17062514 | None:intergenic | 40.0% | |
| CCATCAGAATCAGCAAAGAT+TGG | + | chr3.4:17063703-17063722 | None:intergenic | 40.0% | |
| CCTTAGCTACTGCAATCAAT+GGG | + | chr3.4:17064599-17064618 | None:intergenic | 40.0% | |
| CTAATGCTCACTTCTCTCTT+TGG | + | chr3.4:17063427-17063446 | None:intergenic | 40.0% | |
| CTGCAAACAATAGATGTGAG+TGG | - | chr3.4:17063470-17063489 | MS.gene97819:intron | 40.0% | |
| GAAGGAGTTATAGGTGATGA+AGG | - | chr3.4:17062769-17062788 | MS.gene97819:intron | 40.0% | |
| GAGAGAAGTGAGCATTAGAA+TGG | - | chr3.4:17063429-17063448 | MS.gene97819:intron | 40.0% | |
| GAGAGTTAGAACACATGCAT+GGG | - | chr3.4:17066064-17066083 | MS.gene97819:intron | 40.0% | |
| GATCTAGATTCCATGCAATC+AGG | + | chr3.4:17065786-17065805 | None:intergenic | 40.0% | |
| GATTATATATGGACCGCTGT+TGG | - | chr3.4:17062968-17062987 | MS.gene97819:intron | 40.0% | |
| GCTCAAGAGTCATCATATCA+GGG | - | chr3.4:17063597-17063616 | MS.gene97819:intron | 40.0% | |
| GGGTTCGTGTAATTCAAGTA+CGG | - | chr3.4:17064649-17064668 | MS.gene97819:intron | 40.0% | |
| GTAAGATAGAACACCACTTG+TGG | - | chr3.4:17061976-17061995 | MS.gene97819:intron | 40.0% | |
| GTCTGCGAGAAAAGAAGATA+AGG | + | chr3.4:17061624-17061643 | None:intergenic | 40.0% | |
| GTGACAAAATTAACCCAACC+TGG | - | chr3.4:17062442-17062461 | MS.gene97819:intron | 40.0% | |
| GTGAGCATTAGAATGGAAAG+AGG | - | chr3.4:17063436-17063455 | MS.gene97819:intron | 40.0% | |
| GTGATTAATAGGCCAGTGAA+AGG | - | chr3.4:17062364-17062383 | MS.gene97819:CDS | 40.0% | |
| GTTAATCTTGCCTAGATTGG+TGG | - | chr3.4:17063533-17063552 | MS.gene97819:intron | 40.0% | |
| TAACCAAGGTTACAAAGCAG+AGG | + | chr3.4:17065268-17065287 | None:intergenic | 40.0% | |
| TAGTAACTGTTTCACAGCAG+AGG | - | chr3.4:17062414-17062433 | MS.gene97819:intron | 40.0% | |
| TATGCAGAAGACTCAGAAAG+CGG | - | chr3.4:17064047-17064066 | MS.gene97819:intron | 40.0% | |
| TATGGAACAGAGAGTAGATG+AGG | - | chr3.4:17065416-17065435 | MS.gene97819:intron | 40.0% | |
| TCATCACCTATAACTCCTTC+CGG | + | chr3.4:17062769-17062788 | None:intergenic | 40.0% | |
| TCCTCAGCCATCTAATTCAT+CGG | + | chr3.4:17062830-17062849 | None:intergenic | 40.0% | |
| TCGACCCTTTGATTCAACAA+CGG | + | chr3.4:17066184-17066203 | None:intergenic | 40.0% | |
| TCTAGATTCCATGCAATCAG+GGG | + | chr3.4:17065784-17065803 | None:intergenic | 40.0% | |
| TCTGCCGTTGTTGAATCAAA+GGG | - | chr3.4:17066177-17066196 | MS.gene97819:intron | 40.0% | |
| TGAACTCCCTAATGAGAAAG+AGG | - | chr3.4:17064527-17064546 | MS.gene97819:intron | 40.0% | |
| TGAAGATACAGTCAGGAAAG+TGG | - | chr3.4:17065941-17065960 | MS.gene97819:CDS | 40.0% | |
| TGAGAGTTAGAACACATGCA+TGG | - | chr3.4:17066063-17066082 | MS.gene97819:intron | 40.0% | |
| TGAGCAAGTCATCGTGTTAT+AGG | + | chr3.4:17063582-17063601 | None:intergenic | 40.0% | |
| TGCAATAAGTATCACTCCGA+AGG | - | chr3.4:17061668-17061687 | MS.gene97819:intron | 40.0% | |
| TGCTCAAGAGTCATCATATC+AGG | - | chr3.4:17063596-17063615 | MS.gene97819:intron | 40.0% | |
| TGGTTGCAAGTCAGTAACTT+AGG | + | chr3.4:17062537-17062556 | None:intergenic | 40.0% | |
| TGTAACCTTGGTTAACTGTG+AGG | - | chr3.4:17065274-17065293 | MS.gene97819:intron | 40.0% | |
| TGTATCTCCTGCAAAGTTGT+CGG | - | chr3.4:17061796-17061815 | MS.gene97819:CDS | 40.0% | |
| TTACCAAACATGTCCTTCGT+AGG | + | chr3.4:17061529-17061548 | None:intergenic | 40.0% | |
| TTCCTGACTGTATCTTCATC+AGG | + | chr3.4:17065939-17065958 | None:intergenic | 40.0% | |
| TTCTGCCGTTGTTGAATCAA+AGG | - | chr3.4:17066176-17066195 | MS.gene97819:intron | 40.0% | |
| TTGAGAGGGAGAAATTTGTC+AGG | - | chr3.4:17062864-17062883 | MS.gene97819:intron | 40.0% | |
| TTTCCGTACATTACATGTGG+TGG | - | chr3.4:17064770-17064789 | MS.gene97819:intron | 40.0% | |
| ! | AGAAGGTAATTTTATGGCCC+TGG | + | chr3.4:17064738-17064757 | None:intergenic | 40.0% |
| ! | CAACTTTTATGGCTCCAGTT+TGG | - | chr3.4:17064981-17065000 | MS.gene97819:intron | 40.0% |
| ! | CTTGACTGCGAATTTTCACT+CGG | + | chr3.4:17065627-17065646 | None:intergenic | 40.0% |
| ! | GAAGGTAATTTTATGGCCCT+GGG | + | chr3.4:17064737-17064756 | None:intergenic | 40.0% |
| ! | GATTAAGGCTTGCTTGATAG+AGG | - | chr3.4:17062656-17062675 | MS.gene97819:intron | 40.0% |
| ! | GATTTTCCGGAAGGAGTTAT+AGG | - | chr3.4:17062760-17062779 | MS.gene97819:intron | 40.0% |
| ! | GCAAGTGCCTTTAGAAAACT+AGG | - | chr3.4:17065963-17065982 | MS.gene97819:intron | 40.0% |
| ! | TTGACTGCGAATTTTCACTC+GGG | + | chr3.4:17065626-17065645 | None:intergenic | 40.0% |
| !! | AGTTACTGACTTGCAACCAA+TGG | - | chr3.4:17062538-17062557 | MS.gene97819:intron | 40.0% |
| !! | ATGTCCTTCGTAGGAGTATT+GGG | + | chr3.4:17061520-17061539 | None:intergenic | 40.0% |
| !! | CCAATCTTTGCTGATTCTGA+TGG | - | chr3.4:17063700-17063719 | MS.gene97819:intron | 40.0% |
| !! | CCTGGCTTTGTACTTGTTTA+TGG | - | chr3.4:17062492-17062511 | MS.gene97819:intron | 40.0% |
| !!! | AGAGAGTTAGTTTTGGTTGC+AGG | - | chr3.4:17064142-17064161 | MS.gene97819:intron | 40.0% |
| !!! | AGGTGGTTTTAGGTATCAGA+TGG | + | chr3.4:17063942-17063961 | None:intergenic | 40.0% |
| AAACAAGTACAAAGCCAGGC+CGG | + | chr3.4:17062491-17062510 | None:intergenic | 45.0% | |
| AATCAAAGGGTCGAGTGCAA+AGG | - | chr3.4:17066190-17066209 | MS.gene97819:intron | 45.0% | |
| ACCCACTTCTCTGGTAATTG+TGG | + | chr3.4:17063888-17063907 | None:intergenic | 45.0% | |
| ACGTTCTCCTGATAAGGGTT+TGG | + | chr3.4:17064408-17064427 | None:intergenic | 45.0% | |
| ACTCCTACGAAGGACATGTT+TGG | - | chr3.4:17061523-17061542 | MS.gene97819:CDS | 45.0% | |
| AGAAGAGATTCAGCTCAGTC+TGG | - | chr3.4:17062002-17062021 | MS.gene97819:intron | 45.0% | |
| ATGCAGAAGACTCAGAAAGC+GGG | - | chr3.4:17064048-17064067 | MS.gene97819:intron | 45.0% | |
| CAAAGGACAAGGAGCAACAA+TGG | - | chr3.4:17065362-17065381 | MS.gene97819:intron | 45.0% | |
| CAATGGGAACTCTATTTCCC+AGG | + | chr3.4:17064583-17064602 | None:intergenic | 45.0% | |
| CAGTGCAGCACATAACATCA+TGG | + | chr3.4:17064193-17064212 | None:intergenic | 45.0% | |
| CCATTCCTCACAGTTAACCA+AGG | + | chr3.4:17065282-17065301 | None:intergenic | 45.0% | |
| CCTCGATAGCATTCTTGAGA+AGG | + | chr3.4:17065112-17065131 | None:intergenic | 45.0% | |
| CCTTCTCAAGAATGCTATCG+AGG | - | chr3.4:17065109-17065128 | MS.gene97819:intron | 45.0% | |
| CCTTGGTTAACTGTGAGGAA+TGG | - | chr3.4:17065279-17065298 | MS.gene97819:intron | 45.0% | |
| CTAGATTCCATGCAATCAGG+GGG | + | chr3.4:17065783-17065802 | None:intergenic | 45.0% | |
| CTATTCATGTCGCCTTTCAC+TGG | + | chr3.4:17062379-17062398 | None:intergenic | 45.0% | |
| CTTAAGGAAAAGGGCTCAGT+GGG | - | chr3.4:17064629-17064648 | MS.gene97819:intron | 45.0% | |
| GACCACAATTACCAGAGAAG+TGG | - | chr3.4:17063883-17063902 | MS.gene97819:intron | 45.0% | |
| GATTCATTGGGCATAGTCAC+AGG | + | chr3.4:17063861-17063880 | None:intergenic | 45.0% | |
| GCCTTAGCTACTGCAATCAA+TGG | + | chr3.4:17064600-17064619 | None:intergenic | 45.0% | |
| GCTCCACCACATGTAATGTA+CGG | + | chr3.4:17064776-17064795 | None:intergenic | 45.0% | |
| GGTGAACCTTAACCATTGAG+TGG | - | chr3.4:17063491-17063510 | MS.gene97819:intron | 45.0% | |
| GTACCTCTGCTTTGTAACCT+TGG | - | chr3.4:17065262-17065281 | MS.gene97819:intron | 45.0% | |
| GTATCTCCTGCAAAGTTGTC+GGG | - | chr3.4:17061797-17061816 | MS.gene97819:CDS | 45.0% | |
| GTGCAATCCAAACCCTTATC+AGG | - | chr3.4:17064398-17064417 | MS.gene97819:intron | 45.0% | |
| TAGATGAGGCAGAATCCTTG+TGG | - | chr3.4:17065430-17065449 | MS.gene97819:intron | 45.0% | |
| TCATCATATCAGGGTCGAGT+TGG | - | chr3.4:17063606-17063625 | MS.gene97819:intron | 45.0% | |
| TCCTTTGCTCAACATCCACT+TGG | + | chr3.4:17065349-17065368 | None:intergenic | 45.0% | |
| TCTTAAGGAAAAGGGCTCAG+TGG | - | chr3.4:17064628-17064647 | MS.gene97819:intron | 45.0% | |
| TCTTCCTGGTACAATCCTGT+GGG | + | chr3.4:17063244-17063263 | None:intergenic | 45.0% | |
| TGGATGTTGAGCAAAGGACA+AGG | - | chr3.4:17065351-17065370 | MS.gene97819:intron | 45.0% | |
| TGGGCATAGTCACAGGTATA+GGG | + | chr3.4:17063854-17063873 | None:intergenic | 45.0% | |
| TTGAGTCCGAATGTTGTTGG+TGG | - | chr3.4:17061826-17061845 | MS.gene97819:CDS | 45.0% | |
| TTGCAGACATGGAAGAGTTG+CGG | - | chr3.4:17065907-17065926 | MS.gene97819:CDS | 45.0% | |
| TTGGGCATAGTCACAGGTAT+AGG | + | chr3.4:17063855-17063874 | None:intergenic | 45.0% | |
| TTTCCCCAATACTCCTACGA+AGG | - | chr3.4:17061513-17061532 | MS.gene97819:CDS | 45.0% | |
| ! | AAATGGACTTGAGAGACAGC+TGG | - | chr3.4:17062888-17062907 | MS.gene97819:intron | 45.0% |
| ! | CAAAGATTGGTTCCTTGCCA+AGG | + | chr3.4:17063690-17063709 | None:intergenic | 45.0% |
| ! | CATGTCCTTCGTAGGAGTAT+TGG | + | chr3.4:17061521-17061540 | None:intergenic | 45.0% |
| ! | CCCATTGATTGCAGTAGCTA+AGG | - | chr3.4:17064596-17064615 | MS.gene97819:intron | 45.0% |
| ! | CGAACAGTACAGGTGGTTTT+AGG | + | chr3.4:17063952-17063971 | None:intergenic | 45.0% |
| ! | TGACAAGAGTGAGTGCCTTT+TGG | + | chr3.4:17062028-17062047 | None:intergenic | 45.0% |
| ! | TGACTGCGAATTTTCACTCG+GGG | + | chr3.4:17065625-17065644 | None:intergenic | 45.0% |
| ! | TGCCATTTGAGATGACTGGT+GGG | - | chr3.4:17063653-17063672 | MS.gene97819:intron | 45.0% |
| ! | TGGAGCGTTAGACAAATGGA+CGG | - | chr3.4:17064557-17064576 | MS.gene97819:intron | 45.0% |
| !! | CATGTGCCATTTGAGATGAC+TGG | - | chr3.4:17063649-17063668 | MS.gene97819:intron | 45.0% |
| !! | GCTGCTGATGTTGGTAATCA+GGG | - | chr3.4:17063795-17063814 | MS.gene97819:intron | 45.0% |
| !! | GGATGAATGGATTTTCCGGA+AGG | - | chr3.4:17062751-17062770 | MS.gene97819:intron | 45.0% |
| !! | TGCTGCTGATGTTGGTAATC+AGG | - | chr3.4:17063794-17063813 | MS.gene97819:intron | 45.0% |
| !! | TGTCCTTCGTAGGAGTATTG+GGG | + | chr3.4:17061519-17061538 | None:intergenic | 45.0% |
| !! | TGTTGGTGGTTCTGTTGAGA+AGG | - | chr3.4:17061840-17061859 | MS.gene97819:CDS | 45.0% |
| AGATCTAACGGCTCATGCTC+TGG | - | chr3.4:17065667-17065686 | MS.gene97819:intron | 50.0% | |
| CTCTTCCTGGTACAATCCTG+TGG | + | chr3.4:17063245-17063264 | None:intergenic | 50.0% | |
| CTTCCTGGTACAATCCTGTG+GGG | + | chr3.4:17063243-17063262 | None:intergenic | 50.0% | |
| GACTTGAGAGACAGCTGGAT+TGG | - | chr3.4:17062893-17062912 | MS.gene97819:intron | 50.0% | |
| GCATAGTCACAGGTATAGGG+TGG | + | chr3.4:17063851-17063870 | None:intergenic | 50.0% | |
| GCCAAGTGGATGTTGAGCAA+AGG | - | chr3.4:17065345-17065364 | MS.gene97819:intron | 50.0% | |
| GCCGATGAATTAGATGGCTG+AGG | - | chr3.4:17062826-17062845 | MS.gene97819:intron | 50.0% | |
| GTTAGACAAATGGACGGCCT+GGG | - | chr3.4:17064563-17064582 | MS.gene97819:intron | 50.0% | |
| GTTCACTCGAACAGTACAGG+TGG | + | chr3.4:17063959-17063978 | None:intergenic | 50.0% | |
| TATCCCCACAGGATTGTACC+AGG | - | chr3.4:17063237-17063256 | MS.gene97819:intron | 50.0% | |
| TGCAGACATGGAAGAGTTGC+GGG | - | chr3.4:17065908-17065927 | MS.gene97819:CDS | 50.0% | |
| TGGCATCCATGGGATGTTGT+GGG | - | chr3.4:17063553-17063572 | MS.gene97819:intron | 50.0% | |
| TGGTGGAGCTTAAATGCCCA+GGG | - | chr3.4:17064787-17064806 | MS.gene97819:intron | 50.0% | |
| TGGTTCTCGGGAAACGAAGT+CGG | + | chr3.4:17066256-17066275 | None:intergenic | 50.0% | |
| TTCAGCTCAGTCTGGCCAAA+AGG | - | chr3.4:17062010-17062029 | MS.gene97819:intron | 50.0% | |
| TTTCGACCCGACAACTTTGC+AGG | + | chr3.4:17061806-17061825 | None:intergenic | 50.0% | |
| ! | AAAACCCTTTTGAACCGGCC+TGG | - | chr3.4:17062474-17062493 | MS.gene97819:intron | 50.0% |
| ! | AAAGCCAGGCCGGTTCAAAA+GGG | + | chr3.4:17062481-17062500 | None:intergenic | 50.0% |
| ! | AGAAAGCGGGCTTGCTTTGA+AGG | - | chr3.4:17064061-17064080 | MS.gene97819:intron | 50.0% |
| ! | CCTAGATTGGTGGCATCCAT+GGG | - | chr3.4:17063543-17063562 | MS.gene97819:intron | 50.0% |
| ! | GCCATTTGAGATGACTGGTG+GGG | - | chr3.4:17063654-17063673 | MS.gene97819:intron | 50.0% |
| !! | AGTCGTGTATGGCCTTGTAC+AGG | + | chr3.4:17062235-17062254 | None:intergenic | 50.0% |
| !! | ATGGCCTTGTACAGGCTCAA+CGG | + | chr3.4:17062227-17062246 | None:intergenic | 50.0% |
| !! | CACCGACTTGTAAATGCCCA+GGG | - | chr3.4:17064718-17064737 | MS.gene97819:intron | 50.0% |
| !! | GTGCCATTTGAGATGACTGG+TGG | - | chr3.4:17063652-17063671 | MS.gene97819:intron | 50.0% |
| !! | TCACCGACTTGTAAATGCCC+AGG | - | chr3.4:17064717-17064736 | MS.gene97819:intron | 50.0% |
| AGGTGACCCACAACATCCCA+TGG | + | chr3.4:17063562-17063581 | None:intergenic | 55.0% | |
| ATAAACTCCTCCCACCCCAC+TGG | + | chr3.4:17064113-17064132 | None:intergenic | 55.0% | |
| CAAGCCGTTGAGCCTGTACA+AGG | - | chr3.4:17062220-17062239 | MS.gene97819:CDS | 55.0% | |
| CCCATGGATGCCACCAATCT+AGG | + | chr3.4:17063546-17063565 | None:intergenic | 55.0% | |
| CGTTAGACAAATGGACGGCC+TGG | - | chr3.4:17064562-17064581 | MS.gene97819:intron | 55.0% | |
| CTTGTACAGGCTCAACGGCT+TGG | + | chr3.4:17062222-17062241 | None:intergenic | 55.0% | |
| GCCCCACCAGTCATCTCAAA+TGG | + | chr3.4:17063658-17063677 | None:intergenic | 55.0% | |
| GGCCCTGGGCATTTACAAGT+CGG | + | chr3.4:17064723-17064742 | None:intergenic | 55.0% | |
| GGCTGATGTGATCCTTGGCA+AGG | - | chr3.4:17063675-17063694 | MS.gene97819:intron | 55.0% | |
| GGTTCTCGGGAAACGAAGTC+GGG | + | chr3.4:17066255-17066274 | None:intergenic | 55.0% | |
| GTGGCATCCATGGGATGTTG+TGG | - | chr3.4:17063552-17063571 | MS.gene97819:intron | 55.0% | |
| TAACGGCTCATGCTCTGGCT+TGG | - | chr3.4:17065672-17065691 | MS.gene97819:intron | 55.0% | |
| TATTGAGTGGCCAGTGGGGT+GGG | - | chr3.4:17064100-17064119 | MS.gene97819:intron | 55.0% | |
| TGCATGACCCCCTGATTGCA+TGG | - | chr3.4:17065773-17065792 | MS.gene97819:CDS | 55.0% | |
| TTATTGAGTGGCCAGTGGGG+TGG | - | chr3.4:17064099-17064118 | MS.gene97819:intron | 55.0% | |
| ! | CAAAGCCAGGCCGGTTCAAA+AGG | + | chr3.4:17062482-17062501 | None:intergenic | 55.0% |
| ! | GCCTAGATTGGTGGCATCCA+TGG | - | chr3.4:17063542-17063561 | MS.gene97819:intron | 55.0% |
| ! | GTGGTGGAGCTTAAATGCCC+AGG | - | chr3.4:17064786-17064805 | MS.gene97819:intron | 55.0% |
| !! | GGGTCGAGTTGGTTGTGCAA+CGG | - | chr3.4:17063617-17063636 | MS.gene97819:intron | 55.0% |
| GGTGGGGCTGATGTGATCCT+TGG | - | chr3.4:17063670-17063689 | MS.gene97819:intron | 60.0% | |
| TGAGTGGCCAGTGGGGTGGG+AGG | - | chr3.4:17064103-17064122 | MS.gene97819:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 17061485 | 17066284 | 17061485 | ID=MS.gene97819 |
| chr3.4 | mRNA | 17061485 | 17066284 | 17061485 | ID=MS.gene97819.t1;Parent=MS.gene97819 |
| chr3.4 | exon | 17066225 | 17066284 | 17066225 | ID=MS.gene97819.t1.exon1;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17066225 | 17066284 | 17066225 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17066080 | 17066127 | 17066080 | ID=MS.gene97819.t1.exon2;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17066080 | 17066127 | 17066080 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17065903 | 17065979 | 17065903 | ID=MS.gene97819.t1.exon3;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17065903 | 17065979 | 17065903 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17065717 | 17065816 | 17065717 | ID=MS.gene97819.t1.exon4;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17065717 | 17065816 | 17065717 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17063104 | 17063247 | 17063104 | ID=MS.gene97819.t1.exon5;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17063104 | 17063247 | 17063104 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17062215 | 17062427 | 17062215 | ID=MS.gene97819.t1.exon6;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17062215 | 17062427 | 17062215 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17061708 | 17061866 | 17061708 | ID=MS.gene97819.t1.exon7;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17061708 | 17061866 | 17061708 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| chr3.4 | exon | 17061485 | 17061571 | 17061485 | ID=MS.gene97819.t1.exon8;Parent=MS.gene97819.t1 |
| chr3.4 | CDS | 17061485 | 17061571 | 17061485 | ID=cds.MS.gene97819.t1;Parent=MS.gene97819.t1 |
| Gene Sequence |
| Protein sequence |
