Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98278.t1 | XP_013460938.1 | 93.3 | 779 | 14 | 1 | 1 | 741 | 1 | 779 | 0.00E+00 | 1195.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98278.t1 | Q9FGW9 | 48.2 | 739 | 308 | 17 | 24 | 712 | 1 | 714 | 1.1e-104 | 382.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98278.t1 | A0A072UZK0 | 93.3 | 779 | 14 | 1 | 1 | 741 | 1 | 779 | 0.0e+00 | 1195.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052016 | MS.gene98278 | 0.823321 | 1.48E-53 | -1.69E-46 |
| MS.gene054824 | MS.gene98278 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene98278 | 0.810972 | 8.84E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene98278 | 0.821312 | 4.32E-53 | -1.69E-46 |
| MS.gene056285 | MS.gene98278 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene98278 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene98278 | 0.809871 | 1.53E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene98278 | 0.804122 | 2.51E-49 | -1.69E-46 |
| MS.gene060284 | MS.gene98278 | 0.809342 | 1.98E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene98278 | 0.802491 | 5.47E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene98278 | 0.80322 | 3.87E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene98278 | 0.806228 | 9.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98278 | MS.gene07159 | PPI |
| MS.gene98278 | MS.gene017915 | PPI |
| MS.gene98278 | MS.gene014137 | PPI |
| MS.gene98278 | MS.gene91151 | PPI |
| MS.gene98278 | MS.gene03006 | PPI |
| MS.gene98278 | MS.gene84724 | PPI |
| MS.gene20679 | MS.gene98278 | PPI |
| MS.gene98278 | MS.gene005653 | PPI |
| MS.gene98278 | MS.gene067307 | PPI |
| MS.gene072326 | MS.gene98278 | PPI |
| MS.gene98278 | MS.gene84835 | PPI |
| MS.gene98278 | MS.gene026156 | PPI |
| MS.gene98278 | MS.gene060511 | PPI |
| MS.gene98278 | MS.gene88635 | PPI |
| MS.gene98278 | MS.gene33304 | PPI |
| MS.gene20681 | MS.gene98278 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98278.t1 | MTR_3g075040 | 93.582 | 779 | 12 | 1 | 1 | 741 | 1 | 779 | 0.0 | 1478 |
| MS.gene98278.t1 | MTR_3g075040 | 92.147 | 624 | 11 | 1 | 1 | 586 | 1 | 624 | 0.0 | 1169 |
| MS.gene98278.t1 | MTR_0018s0090 | 43.347 | 759 | 298 | 18 | 76 | 741 | 32 | 751 | 1.98e-149 | 454 |
| MS.gene98278.t1 | MTR_0018s0090 | 38.080 | 625 | 255 | 17 | 76 | 606 | 32 | 618 | 5.41e-100 | 321 |
| MS.gene98278.t1 | MTR_2g091135 | 41.126 | 231 | 95 | 6 | 207 | 405 | 308 | 529 | 1.60e-41 | 161 |
| MS.gene98278.t1 | MTR_4g092880 | 36.937 | 222 | 102 | 4 | 94 | 311 | 66 | 253 | 2.01e-37 | 144 |
| MS.gene98278.t1 | MTR_2g091130 | 39.732 | 224 | 108 | 4 | 207 | 405 | 297 | 518 | 2.12e-37 | 149 |
| MS.gene98278.t1 | MTR_2g091135 | 34.579 | 321 | 149 | 8 | 207 | 475 | 308 | 619 | 2.94e-37 | 149 |
| MS.gene98278.t1 | MTR_4g092880 | 36.937 | 222 | 102 | 4 | 94 | 311 | 66 | 253 | 1.37e-36 | 145 |
| MS.gene98278.t1 | MTR_4g079650 | 38.605 | 215 | 97 | 5 | 206 | 391 | 655 | 863 | 5.56e-36 | 146 |
| MS.gene98278.t1 | MTR_4g092900 | 35.656 | 244 | 106 | 6 | 79 | 311 | 51 | 254 | 1.12e-35 | 142 |
| MS.gene98278.t1 | MTR_4g092900 | 35.656 | 244 | 106 | 6 | 79 | 311 | 51 | 254 | 1.23e-35 | 142 |
| MS.gene98278.t1 | MTR_4g079650 | 41.969 | 193 | 77 | 5 | 206 | 369 | 655 | 841 | 9.39e-35 | 142 |
| MS.gene98278.t1 | MTR_4g079650 | 41.969 | 193 | 77 | 5 | 206 | 369 | 655 | 841 | 1.09e-34 | 142 |
| MS.gene98278.t1 | MTR_2g018270 | 44.048 | 168 | 76 | 4 | 147 | 310 | 30 | 183 | 4.87e-34 | 137 |
| MS.gene98278.t1 | MTR_2g018270 | 45.349 | 172 | 81 | 6 | 556 | 721 | 335 | 499 | 1.69e-23 | 105 |
| MS.gene98278.t1 | MTR_8g070660 | 40.367 | 109 | 62 | 1 | 206 | 311 | 93 | 201 | 5.44e-21 | 94.0 |
| MS.gene98278.t1 | MTR_8g070660 | 42.157 | 102 | 56 | 1 | 206 | 304 | 93 | 194 | 5.89e-21 | 95.9 |
| MS.gene98278.t1 | MTR_6g033375 | 37.168 | 113 | 68 | 1 | 195 | 304 | 57 | 169 | 1.38e-18 | 88.2 |
| MS.gene98278.t1 | MTR_2g437920 | 39.362 | 94 | 54 | 1 | 221 | 311 | 146 | 239 | 4.48e-16 | 81.3 |
| MS.gene98278.t1 | MTR_5g069490 | 44.048 | 84 | 44 | 1 | 221 | 301 | 113 | 196 | 3.19e-15 | 78.2 |
| MS.gene98278.t1 | MTR_8g005100 | 42.857 | 63 | 34 | 1 | 225 | 287 | 97 | 157 | 1.80e-11 | 64.7 |
| MS.gene98278.t1 | MTR_8g062330 | 38.462 | 91 | 53 | 2 | 212 | 301 | 345 | 433 | 6.25e-11 | 65.9 |
| MS.gene98278.t1 | MTR_3g115560 | 36.082 | 97 | 60 | 1 | 213 | 309 | 131 | 225 | 8.28e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98278.t1 | AT5G63320 | 48.790 | 744 | 302 | 19 | 24 | 715 | 1 | 717 | 1.38e-153 | 474 |
| MS.gene98278.t1 | AT5G14270 | 43.732 | 702 | 290 | 19 | 89 | 741 | 44 | 689 | 3.21e-130 | 402 |
| MS.gene98278.t1 | AT5G14270 | 43.983 | 698 | 293 | 20 | 89 | 741 | 44 | 688 | 2.10e-129 | 400 |
| MS.gene98278.t1 | AT5G14270 | 43.983 | 698 | 293 | 20 | 89 | 741 | 44 | 688 | 2.10e-129 | 400 |
| MS.gene98278.t1 | AT3G27260 | 40.027 | 747 | 359 | 14 | 24 | 725 | 1 | 703 | 9.76e-122 | 384 |
| MS.gene98278.t1 | AT3G27260 | 40.295 | 747 | 366 | 15 | 24 | 725 | 1 | 712 | 2.84e-121 | 383 |
| MS.gene98278.t1 | AT3G01770 | 42.424 | 660 | 299 | 20 | 89 | 741 | 35 | 620 | 2.27e-114 | 359 |
| MS.gene98278.t1 | AT3G27260 | 40.525 | 686 | 324 | 13 | 85 | 725 | 8 | 654 | 2.56e-111 | 355 |
| MS.gene98278.t1 | AT5G63320 | 44.397 | 473 | 197 | 12 | 24 | 456 | 1 | 447 | 2.38e-109 | 341 |
| MS.gene98278.t1 | AT5G63320 | 44.397 | 473 | 197 | 12 | 24 | 456 | 1 | 447 | 2.38e-109 | 341 |
| MS.gene98278.t1 | AT3G27260 | 40.132 | 456 | 216 | 10 | 24 | 438 | 1 | 440 | 1.64e-81 | 275 |
| MS.gene98278.t1 | AT3G01770 | 36.978 | 503 | 246 | 15 | 89 | 586 | 35 | 471 | 3.52e-70 | 238 |
| MS.gene98278.t1 | AT1G73150 | 31.778 | 343 | 157 | 6 | 98 | 405 | 51 | 351 | 2.75e-40 | 154 |
| MS.gene98278.t1 | AT1G73150 | 30.978 | 368 | 170 | 7 | 73 | 405 | 33 | 351 | 4.37e-40 | 153 |
| MS.gene98278.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.54e-35 | 143 |
| MS.gene98278.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.54e-35 | 143 |
| MS.gene98278.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.54e-35 | 143 |
| MS.gene98278.t1 | AT1G06230 | 38.362 | 232 | 109 | 6 | 206 | 405 | 421 | 650 | 3.54e-35 | 143 |
| MS.gene98278.t1 | AT5G46550 | 59.804 | 102 | 41 | 0 | 209 | 310 | 72 | 173 | 8.13e-34 | 136 |
| MS.gene98278.t1 | AT1G17790 | 38.498 | 213 | 92 | 4 | 98 | 308 | 59 | 234 | 2.33e-33 | 135 |
| MS.gene98278.t1 | AT5G10550 | 34.583 | 240 | 141 | 5 | 87 | 325 | 69 | 293 | 4.72e-31 | 129 |
| MS.gene98278.t1 | AT5G65630 | 32.353 | 238 | 139 | 3 | 94 | 325 | 67 | 288 | 2.72e-30 | 127 |
| MS.gene98278.t1 | AT2G34900 | 43.810 | 105 | 59 | 0 | 207 | 311 | 1 | 105 | 5.33e-24 | 102 |
| MS.gene98278.t1 | AT2G34900 | 44.340 | 106 | 59 | 0 | 206 | 311 | 110 | 215 | 1.15e-23 | 104 |
| MS.gene98278.t1 | AT3G52280 | 36.697 | 109 | 66 | 1 | 206 | 311 | 94 | 202 | 4.29e-17 | 84.3 |
| MS.gene98278.t1 | AT3G52280 | 36.697 | 109 | 66 | 1 | 206 | 311 | 111 | 219 | 7.25e-17 | 84.0 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 9.03e-12 | 68.9 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 9.03e-12 | 68.9 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 9.20e-12 | 68.9 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 9.20e-12 | 68.9 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 9.20e-12 | 68.9 |
| MS.gene98278.t1 | AT1G58025 | 35.789 | 95 | 60 | 1 | 213 | 306 | 222 | 316 | 1.11e-11 | 68.6 |
Find 181 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAGCTCCCTCTTTCTTT+TGG | 0.184231 | 3.1:-61578710 | None:intergenic |
| GCTCGACGGTAGAGAGTTTC+AGG | 0.216942 | 3.1:-61578047 | None:intergenic |
| GACCCACCATTTCCAGTTTC+GGG | 0.237877 | 3.1:-61577719 | None:intergenic |
| TTGTGATTGAGAATACTTTC+TGG | 0.256920 | 3.1:-61574468 | None:intergenic |
| AGTGGAGGATAATTTGAATT+AGG | 0.259823 | 3.1:-61576498 | None:intergenic |
| CTTAGTAAAGCCTTTGAAAA+AGG | 0.265049 | 3.1:+61575310 | MS.gene98278:CDS |
| CATCAAACAACCAATGGATT+TGG | 0.265703 | 3.1:+61575153 | MS.gene98278:CDS |
| ATTTGAAATCGAGGTTGATT+TGG | 0.278968 | 3.1:+61574750 | MS.gene98278:CDS |
| CGTCTGATGTCTCATCAATT+TGG | 0.281091 | 3.1:+61575070 | MS.gene98278:CDS |
| TCTACCGTCGAGCTTTATTA+AGG | 0.282672 | 3.1:+61578057 | MS.gene98278:CDS |
| GGACCCACCATTTCCAGTTT+CGG | 0.291714 | 3.1:-61577720 | None:intergenic |
| GTGCAGCTTCTTAATGAATC+AGG | 0.292897 | 3.1:+61576272 | MS.gene98278:intron |
| GTACAATCCTAACTGCTCTA+AGG | 0.297632 | 3.1:-61578994 | None:intergenic |
| TCGTCATGTGGTAGAGACTA+TGG | 0.304985 | 3.1:+61574550 | MS.gene98278:CDS |
| GTACACAATTTACCTTTAGA+AGG | 0.328869 | 3.1:-61576317 | None:intergenic |
| CTCGCCTCCTCTTTGAAACT+TGG | 0.343353 | 3.1:-61578921 | None:intergenic |
| CTTCTGCTTCAGCTTTCCTC+CGG | 0.345699 | 3.1:-61578675 | None:intergenic |
| TTTGAAATCGAGGTTGATTT+GGG | 0.355871 | 3.1:+61574751 | MS.gene98278:CDS |
| TCGGATGGGTTGGGTAGCTC+GGG | 0.359165 | 3.1:+61574578 | MS.gene98278:CDS |
| GTCAGAACCTCTTAGTTCTA+AGG | 0.365851 | 3.1:+61577541 | MS.gene98278:CDS |
| GTCGGATGGGTTGGGTAGCT+CGG | 0.369109 | 3.1:+61574577 | MS.gene98278:CDS |
| TGTTGTTAAATTGAACATTC+CGG | 0.371429 | 3.1:+61575117 | MS.gene98278:CDS |
| GATGATCATCAAAATGGATT+TGG | 0.375420 | 3.1:+61578948 | MS.gene98278:CDS |
| AGCCCAGATGATCATCAAAA+TGG | 0.376994 | 3.1:+61578942 | MS.gene98278:CDS |
| ATAATTCTTTCAGCAGGTTC+TGG | 0.379739 | 3.1:-61575481 | None:intergenic |
| CTCTTTCAAGAAATCAAGAA+TGG | 0.385835 | 3.1:-61575569 | None:intergenic |
| CTCTCTGATTCAATAGTATC+TGG | 0.389894 | 3.1:-61577903 | None:intergenic |
| TGGAGAGCCAACACAGTATA+CGG | 0.390467 | 3.1:+61574891 | MS.gene98278:CDS |
| TAGCTCGGGGAGGGTTGATA+TGG | 0.391164 | 3.1:+61574592 | MS.gene98278:CDS |
| TTTCCAGTTTCGGGATTACT+AGG | 0.393300 | 3.1:-61577710 | None:intergenic |
| TTTCTCTTGAGCTTTCAGTA+TGG | 0.398691 | 3.1:-61578096 | None:intergenic |
| GATCCTAGTAATCCCGAAAC+TGG | 0.398992 | 3.1:+61577707 | MS.gene98278:CDS |
| ATCAAACAACCAATGGATTT+GGG | 0.400698 | 3.1:+61575154 | MS.gene98278:CDS |
| GGAGAGAGAAGCAGCCCGGC+AGG | 0.409897 | 3.1:+61578729 | MS.gene98278:CDS |
| GATGTCTCATCAATTTGGTT+GGG | 0.409934 | 3.1:+61575075 | MS.gene98278:CDS |
| TTGAAAGGTAACGACGGATA+TGG | 0.411750 | 3.1:+61574665 | MS.gene98278:CDS |
| TTGATGACATTGAAATAATC+CGG | 0.412270 | 3.1:-61575136 | None:intergenic |
| TGATGTCTCATCAATTTGGT+TGG | 0.423505 | 3.1:+61575074 | MS.gene98278:CDS |
| GCTTGACTTACGATCAAAAC+AGG | 0.424175 | 3.1:+61577681 | MS.gene98278:CDS |
| ATTACACTTTCTACATAAGT+AGG | 0.426240 | 3.1:-61575397 | None:intergenic |
| AGCAGCTCTAGTAGTGAATC+TGG | 0.427342 | 3.1:+61576570 | MS.gene98278:CDS |
| TGGGACCACTACGCCCTGGC+AGG | 0.429672 | 3.1:-61574946 | None:intergenic |
| TCAGATTCAAGTAGTTCATC+TGG | 0.431497 | 3.1:+61577494 | MS.gene98278:CDS |
| AAGAAATCAAGAATGGAATC+AGG | 0.433454 | 3.1:-61575562 | None:intergenic |
| TTCTGCTTCAGCTTTCCTCC+GGG | 0.433559 | 3.1:-61578674 | None:intergenic |
| ATGGGTGAGTCGGATGGGTT+GGG | 0.436222 | 3.1:+61574569 | MS.gene98278:CDS |
| TACTCCAAAGGTTATGCTAC+TGG | 0.436978 | 3.1:+61574512 | MS.gene98278:CDS |
| CAAAAGCTGCAGAAGAGGCC+CGG | 0.440120 | 3.1:+61578656 | MS.gene98278:CDS |
| AAACCAAGTTGCTTCCTGTT+CGG | 0.441398 | 3.1:-61574644 | None:intergenic |
| ATGGGTTGGGTAGCTCGGGG+AGG | 0.441503 | 3.1:+61574582 | MS.gene98278:CDS |
| TTGTATAGATTCAACTAACC+TGG | 0.444753 | 3.1:+61577848 | MS.gene98278:intron |
| GTATTCTCAATCACAAGTTA+TGG | 0.445787 | 3.1:+61574475 | MS.gene98278:CDS |
| AGTATGAATTCGAACATTGT+TGG | 0.446088 | 3.1:+61574812 | MS.gene98278:CDS |
| GACAATGAGTATAGTTGAAA+CGG | 0.448517 | 3.1:-61574701 | None:intergenic |
| TATTCTCAATCACAAGTTAT+GGG | 0.451420 | 3.1:+61574476 | MS.gene98278:CDS |
| TTCAACTAACCTGGGTATCC+AGG | 0.452896 | 3.1:+61577857 | MS.gene98278:CDS |
| TATGGGTGAGTCGGATGGGT+TGG | 0.456554 | 3.1:+61574568 | MS.gene98278:CDS |
| CTGATTCCTATGCACCGAAC+AGG | 0.458884 | 3.1:+61574630 | MS.gene98278:CDS |
| TCTGCAAACTCTGGTCAGCC+TGG | 0.461911 | 3.1:-61577875 | None:intergenic |
| AGCTGGAGAGAGAAGCAGCC+CGG | 0.464666 | 3.1:+61578725 | MS.gene98278:CDS |
| TCAAGAGAAAACCCTTGAAA+AGG | 0.469166 | 3.1:+61578109 | MS.gene98278:CDS |
| AAAACCAGTAGCATAACCTT+TGG | 0.469271 | 3.1:-61574516 | None:intergenic |
| TTCAATTTAACAACATCGAC+TGG | 0.477317 | 3.1:-61575109 | None:intergenic |
| GATCATCAAAATGGATTTGG+TGG | 0.480844 | 3.1:+61578951 | MS.gene98278:CDS |
| GAATCAGAGAGCCACCTAGA+TGG | 0.481644 | 3.1:+61577915 | MS.gene98278:CDS |
| TGGGTTGGGTAGCTCGGGGA+GGG | 0.484405 | 3.1:+61574583 | MS.gene98278:CDS |
| TTGCTTCCTGTTCGGTGCAT+AGG | 0.484773 | 3.1:-61574636 | None:intergenic |
| GGGACAGAAAAGGCCTCAGC+TGG | 0.486185 | 3.1:+61574871 | MS.gene98278:CDS |
| CCTTCTTCTACATCTTTCGA+TGG | 0.487286 | 3.1:-61579071 | None:intergenic |
| GGAAATCCCTTAGAGCAGTT+AGG | 0.490294 | 3.1:+61578987 | MS.gene98278:CDS |
| GGCTTGGTAAAAGTGTCGTT+TGG | 0.491438 | 3.1:-61575460 | None:intergenic |
| TCAGTCATAATTCTTTCAGC+AGG | 0.491461 | 3.1:-61575487 | None:intergenic |
| CCAAATGCCAGGCAATGAAC+TGG | 0.491464 | 3.1:+61576437 | MS.gene98278:intron |
| AGTAATCCCGAAACTGGAAA+TGG | 0.494331 | 3.1:+61577713 | MS.gene98278:CDS |
| AGAGGCAAAAGCTGCAGAAG+AGG | 0.496737 | 3.1:+61578651 | MS.gene98278:CDS |
| CGGATGGGTTGGGTAGCTCG+GGG | 0.497298 | 3.1:+61574579 | MS.gene98278:CDS |
| ATTGTCTAAAATGTCGGCTA+TGG | 0.498102 | 3.1:+61574718 | MS.gene98278:CDS |
| TACAATCCTAACTGCTCTAA+GGG | 0.501166 | 3.1:-61578993 | None:intergenic |
| AGGAAGCAACTTGGTTTGAA+AGG | 0.507274 | 3.1:+61574650 | MS.gene98278:CDS |
| CCAATCACCTTAGAACTAAG+AGG | 0.507874 | 3.1:-61577548 | None:intergenic |
| GCCAGGCAATGAACTGGTTG+AGG | 0.509028 | 3.1:+61576443 | MS.gene98278:intron |
| GCAGAAATTGAGTCAACAGT+TGG | 0.514082 | 3.1:+61575519 | MS.gene98278:CDS |
| GGTAAGAAAAGACCCCTGCC+AGG | 0.515915 | 3.1:+61574932 | MS.gene98278:CDS |
| TATCTCCGTCGAGTGACATA+AGG | 0.519054 | 3.1:+61574837 | MS.gene98278:CDS |
| CAATGTCATCAAACAACCAA+TGG | 0.519341 | 3.1:+61575147 | MS.gene98278:CDS |
| ATTTGGTGGGATCAAGCTGC+AGG | 0.519402 | 3.1:+61578965 | MS.gene98278:CDS |
| CAACAGTTGGAGGATATGCT+TGG | 0.520529 | 3.1:+61575532 | MS.gene98278:CDS |
| TCAGTATGGTGTCAGCAAAC+CGG | 0.521023 | 3.1:-61578082 | None:intergenic |
| TCATCCATGCAACCTTCTAA+AGG | 0.522115 | 3.1:+61576305 | MS.gene98278:CDS |
| GAAGGTTGATGACGAGGATG+AGG | 0.522882 | 3.1:+61579019 | MS.gene98278:CDS |
| TCTTTCAGCAGGTTCTGGCT+TGG | 0.525862 | 3.1:-61575476 | None:intergenic |
| GGGAGGGTGTTGCGTCTAAG+AGG | 0.526449 | 3.1:+61578015 | MS.gene98278:CDS |
| GTCGAGCTTTATTAAGGAGC+CGG | 0.526937 | 3.1:+61578063 | MS.gene98278:CDS |
| GTGAAGAGTAGGATAACATC+TGG | 0.526957 | 3.1:+61575181 | MS.gene98278:CDS |
| GACATAAGGAGCTGCAGTGT+GGG | 0.528436 | 3.1:+61574851 | MS.gene98278:CDS |
| GGTTGATGACGAGGATGAGG+AGG | 0.528529 | 3.1:+61579022 | MS.gene98278:CDS |
| CTGGCTTAGTCTGCAAACTC+TGG | 0.529168 | 3.1:-61577884 | None:intergenic |
| TGCAGCTTCTTAATGAATCA+GGG | 0.529324 | 3.1:+61576273 | MS.gene98278:intron |
| ATACTCATTGTCTAAAATGT+CGG | 0.531531 | 3.1:+61574712 | MS.gene98278:CDS |
| GGGACCACTACGCCCTGGCA+GGG | 0.531672 | 3.1:-61574945 | None:intergenic |
| CTATGAATTGCAGGAAAATG+TGG | 0.532385 | 3.1:+61577652 | MS.gene98278:intron |
| CACATCATCAGCAAAATCCA+TGG | 0.532779 | 3.1:-61575218 | None:intergenic |
| AACGTGACCCTGAAAAGCTT+AGG | 0.534483 | 3.1:+61578436 | MS.gene98278:CDS |
| TTTACCTTTAGAAGGTTGCA+TGG | 0.540896 | 3.1:-61576309 | None:intergenic |
| AGACTATGGGTGAGTCGGAT+GGG | 0.541351 | 3.1:+61574564 | MS.gene98278:CDS |
| CCATCGAAAGATGTAGAAGA+AGG | 0.542455 | 3.1:+61579071 | MS.gene98278:CDS |
| AAAGAGCAAAGTCGCATCGC+AGG | 0.542643 | 3.1:+61575586 | MS.gene98278:CDS |
| ATGCTGTGCACATCATTGCC+AGG | 0.543365 | 3.1:-61575277 | None:intergenic |
| GAGACTATGGGTGAGTCGGA+TGG | 0.543412 | 3.1:+61574563 | MS.gene98278:CDS |
| GGACCACTACGCCCTGGCAG+GGG | 0.544331 | 3.1:-61574944 | None:intergenic |
| AGAGAAAGAATTTGAAATCG+AGG | 0.545941 | 3.1:+61574741 | MS.gene98278:CDS |
| AGCCAAAAGAAAGAGGGAGC+TGG | 0.546575 | 3.1:+61578708 | MS.gene98278:CDS |
| GCTGCAGTGTGGGACAGAAA+AGG | 0.548653 | 3.1:+61574861 | MS.gene98278:CDS |
| GCACCGAACAGGAAGCAACT+TGG | 0.552234 | 3.1:+61574641 | MS.gene98278:CDS |
| CAGCTGAAGCCAAAAGAAAG+AGG | 0.552563 | 3.1:+61578701 | MS.gene98278:CDS |
| CTTGAGAGGAGGCAGAAGGA+AGG | 0.553387 | 3.1:+61578474 | MS.gene98278:CDS |
| TGATATGGAGCCGACTGCAT+CGG | 0.553491 | 3.1:+61574607 | MS.gene98278:CDS |
| TTCACAGTACCCAAATCCAT+TGG | 0.555079 | 3.1:-61575163 | None:intergenic |
| GAGCAAAGTCGCATCGCAGG+AGG | 0.555548 | 3.1:+61575589 | MS.gene98278:CDS |
| AACGAACGATGATGAAATTG+AGG | 0.559453 | 3.1:+61575615 | MS.gene98278:CDS |
| CGTCATGTGGTAGAGACTAT+GGG | 0.559524 | 3.1:+61574551 | MS.gene98278:CDS |
| TGATGTGCACAGCATAGCAT+TGG | 0.560382 | 3.1:+61575285 | MS.gene98278:CDS |
| TGATGACGAGGATGAGGAGG+AGG | 0.560459 | 3.1:+61579025 | MS.gene98278:CDS |
| GCAAAATCTATGGGAACAGT+TGG | 0.560604 | 3.1:-61574431 | None:intergenic |
| AATGTAGCATATGAAGCCAT+TGG | 0.567901 | 3.1:-61575019 | None:intergenic |
| TGGTAAATATTCAAATCCCA+TGG | 0.569156 | 3.1:+61575201 | MS.gene98278:CDS |
| TGTTCCTGAGTTTCGTCATG+TGG | 0.571126 | 3.1:+61574538 | MS.gene98278:CDS |
| CTGTGTTGGCTCTCCAGCTG+AGG | 0.572376 | 3.1:-61574884 | None:intergenic |
| TGTATAGATTCAACTAACCT+GGG | 0.573975 | 3.1:+61577849 | MS.gene98278:intron |
| TCTGGTCAGCCTGGATACCC+AGG | 0.577514 | 3.1:-61577866 | None:intergenic |
| AGACCCCTGCCAGGGCGTAG+TGG | 0.578757 | 3.1:+61574941 | MS.gene98278:CDS |
| ACAGCTCTCGTTGATTTCAA+CGG | 0.578801 | 3.1:-61578847 | None:intergenic |
| GAGGAGGACGTGGACATCGT+TGG | 0.579944 | 3.1:+61576462 | MS.gene98278:CDS |
| ATTTGGGTACTGTGAAGAGT+AGG | 0.581358 | 3.1:+61575170 | MS.gene98278:CDS |
| GTCTTGGGACCACTACGCCC+TGG | 0.583209 | 3.1:-61574950 | None:intergenic |
| TGAACTGGTTGAGGAGGACG+TGG | 0.585832 | 3.1:+61576452 | MS.gene98278:CDS |
| GAGGACGTGGACATCGTTGG+TGG | 0.588189 | 3.1:+61576465 | MS.gene98278:CDS |
| GGGACACGATGATCAATGAC+AGG | 0.598469 | 3.1:-61575358 | None:intergenic |
| ATGCTTGCCGTATACTGTGT+TGG | 0.598736 | 3.1:-61574898 | None:intergenic |
| ATCATCAAAATGGATTTGGT+GGG | 0.599268 | 3.1:+61578952 | MS.gene98278:CDS |
| TACACCAAGTTTCAAAGAGG+AGG | 0.599655 | 3.1:+61578917 | MS.gene98278:CDS |
| GCAGTTAGGATTGTACATGA+AGG | 0.601776 | 3.1:+61579001 | MS.gene98278:CDS |
| GAAATTGAGTCAACAGTTGG+AGG | 0.604172 | 3.1:+61575522 | MS.gene98278:CDS |
| GGAGGATAATTTGAATTAGG+CGG | 0.606500 | 3.1:-61576495 | None:intergenic |
| AGAACTTGAGAGGAGGCAGA+AGG | 0.608648 | 3.1:+61578470 | MS.gene98278:CDS |
| AGCAAAGTCGCATCGCAGGA+GGG | 0.609818 | 3.1:+61575590 | MS.gene98278:CDS |
| GAAAGCTCGATTGCAAGCAG+AGG | 0.612062 | 3.1:+61578633 | MS.gene98278:CDS |
| TAGGAATCAGCCGATGCAGT+CGG | 0.613535 | 3.1:-61574617 | None:intergenic |
| TCTACCACATGACGAAACTC+AGG | 0.614639 | 3.1:-61574542 | None:intergenic |
| CTTGACTTACGATCAAAACA+GGG | 0.615865 | 3.1:+61577682 | MS.gene98278:CDS |
| ACACAGTATACGGCAAGCAT+CGG | 0.617021 | 3.1:+61574901 | MS.gene98278:CDS |
| AGCTGAAGCCAAAAGAAAGA+GGG | 0.617838 | 3.1:+61578702 | MS.gene98278:CDS |
| GATGGCTCTGCAGCACTCTG+AGG | 0.618982 | 3.1:-61579053 | None:intergenic |
| CGGCAAGCATCGGTGCCACA+TGG | 0.620715 | 3.1:+61574911 | MS.gene98278:CDS |
| TTGAGCGAGAAGAACTTGAG+AGG | 0.622715 | 3.1:+61578460 | MS.gene98278:CDS |
| ACATCATCAGCAAAATCCAT+GGG | 0.623227 | 3.1:-61575217 | None:intergenic |
| ATTCTCAATCACAAGTTATG+GGG | 0.631785 | 3.1:+61574477 | MS.gene98278:CDS |
| AGGCAATGAACTGGTTGAGG+AGG | 0.632610 | 3.1:+61576446 | MS.gene98278:intron |
| AAATCAAGAAAATACTCCAA+AGG | 0.633873 | 3.1:+61574500 | MS.gene98278:CDS |
| AGCGAGAAGAACTTGAGAGG+AGG | 0.636218 | 3.1:+61578463 | MS.gene98278:CDS |
| TTTGGTGGGATCAAGCTGCA+GGG | 0.639434 | 3.1:+61578966 | MS.gene98278:CDS |
| TTGCAGGAAAATGTGGGACC+TGG | 0.639784 | 3.1:+61577659 | MS.gene98278:intron |
| GTAAGAAAAGACCCCTGCCA+GGG | 0.640414 | 3.1:+61574933 | MS.gene98278:CDS |
| TATGAATTGCAGGAAAATGT+GGG | 0.641252 | 3.1:+61577653 | MS.gene98278:intron |
| TTTCAAGCTTACCATCTAGG+TGG | 0.643818 | 3.1:-61577926 | None:intergenic |
| TGAAAGAATTATGACTGACA+TGG | 0.647393 | 3.1:+61575492 | MS.gene98278:CDS |
| AAATACACCAAGTTTCAAAG+AGG | 0.661472 | 3.1:+61578914 | MS.gene98278:CDS |
| GCAATGACTTATAATCCACC+TGG | 0.664500 | 3.1:+61575259 | MS.gene98278:CDS |
| CAAATTGATGAGACATCAGA+CGG | 0.667504 | 3.1:-61575069 | None:intergenic |
| TGACATAAGGAGCTGCAGTG+TGG | 0.675265 | 3.1:+61574850 | MS.gene98278:CDS |
| GGTAGAGACTATGGGTGAGT+CGG | 0.677195 | 3.1:+61574559 | MS.gene98278:CDS |
| CAGCTCCTTATGTCACTCGA+CGG | 0.678805 | 3.1:-61574842 | None:intergenic |
| GAATCTGGCTCATCATCCAG+TGG | 0.679363 | 3.1:+61576585 | MS.gene98278:CDS |
| TGACTTACGATCAAAACAGG+GGG | 0.682999 | 3.1:+61577684 | MS.gene98278:CDS |
| CTTGGTTTGAAAGGTAACGA+CGG | 0.683657 | 3.1:+61574659 | MS.gene98278:CDS |
| GGCTCCTTAATAAAGCTCGA+CGG | 0.684386 | 3.1:-61578061 | None:intergenic |
| AAGCTGCAGAAGAGGCCCGG+AGG | 0.701414 | 3.1:+61578659 | MS.gene98278:CDS |
| TTGACTTACGATCAAAACAG+GGG | 0.729127 | 3.1:+61577683 | MS.gene98278:CDS |
| GTACATGAAGGTTGATGACG+AGG | 0.732133 | 3.1:+61579013 | MS.gene98278:CDS |
| CTGTGCACATCATTGCCAGG+TGG | 0.741938 | 3.1:-61575274 | None:intergenic |
| GACTTACGATCAAAACAGGG+GGG | 0.756673 | 3.1:+61577685 | MS.gene98278:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGTAAAATAGTTTA+AGG | - | chr3.1:61576765-61576784 | None:intergenic | 10.0% |
| !!! | ATTCATTTATGTAATAATTT+TGG | + | chr3.1:61576816-61576835 | MS.gene98278:intron | 10.0% |
| !!! | ATTTTTTTTTTCTTTCTAAA+TGG | + | chr3.1:61578530-61578549 | MS.gene98278:intron | 10.0% |
| !! | AGAAAGAAAAAAAAAATACA+AGG | - | chr3.1:61578527-61578546 | None:intergenic | 15.0% |
| !! | ATTGTTAAAATTTGACATTT+AGG | + | chr3.1:61575940-61575959 | MS.gene98278:intron | 15.0% |
| !!! | CATTTAAAAATTTTATTGCA+TGG | + | chr3.1:61576116-61576135 | MS.gene98278:intron | 15.0% |
| !!! | TTATACCTAAAATATTGATT+AGG | - | chr3.1:61576797-61576816 | None:intergenic | 15.0% |
| !! | ACATCCAAAAGAAATAAAAA+TGG | - | chr3.1:61576695-61576714 | None:intergenic | 20.0% |
| !! | TGAATTTATAAGAGAAATAC+TGG | - | chr3.1:61577183-61577202 | None:intergenic | 20.0% |
| !! | TTCATATAAAACTTGCATAA+TGG | - | chr3.1:61578378-61578397 | None:intergenic | 20.0% |
| !!! | AACTCCATTTTTATTTCTTT+TGG | + | chr3.1:61576688-61576707 | MS.gene98278:intron | 20.0% |
| !!! | ATTTTTATTTCTTTTGGATG+TGG | + | chr3.1:61576694-61576713 | MS.gene98278:intron | 20.0% |
| !!! | CTATTTTACTTTTTTTTTCC+CGG | + | chr3.1:61576769-61576788 | MS.gene98278:intron | 20.0% |
| !!! | GTTTTATCATAAACCATATT+TGG | - | chr3.1:61576015-61576034 | None:intergenic | 20.0% |
| !!! | TGGTTAATTTTAATGCATTA+TGG | + | chr3.1:61577122-61577141 | MS.gene98278:intron | 20.0% |
| ! | AAAAATATACAAGTTCCTAC+TGG | - | chr3.1:61576946-61576965 | None:intergenic | 25.0% |
| ! | AAATCAAGAAAATACTCCAA+AGG | + | chr3.1:61574500-61574519 | MS.gene98278:CDS | 25.0% |
| ! | AAGAAATAAAAATGGAGTTC+TGG | - | chr3.1:61576687-61576706 | None:intergenic | 25.0% |
| ! | AGAAATAAAAATGGAGTTCT+GGG | - | chr3.1:61576686-61576705 | None:intergenic | 25.0% |
| ! | ATTACACTTTCTACATAAGT+AGG | - | chr3.1:61575400-61575419 | None:intergenic | 25.0% |
| ! | ATTTGACATTTAGGAACTAT+AGG | + | chr3.1:61575949-61575968 | MS.gene98278:intron | 25.0% |
| ! | CAGGAAGCTTAATTTATATA+TGG | - | chr3.1:61578787-61578806 | None:intergenic | 25.0% |
| ! | CATATATAAATTAAGCTTCC+TGG | + | chr3.1:61578785-61578804 | MS.gene98278:intron | 25.0% |
| ! | CTGCATAAAATGATAGTTTA+CGG | - | chr3.1:61576192-61576211 | None:intergenic | 25.0% |
| ! | CTTGAAAATTCATAGAGATT+TGG | - | chr3.1:61576741-61576760 | None:intergenic | 25.0% |
| ! | TATTCTCAATCACAAGTTAT+GGG | + | chr3.1:61574476-61574495 | MS.gene98278:CDS | 25.0% |
| ! | TATTGCTAAAGTAGTAAATC+TGG | + | chr3.1:61578308-61578327 | MS.gene98278:intron | 25.0% |
| ! | TGTTGTTAAATTGAACATTC+CGG | + | chr3.1:61575117-61575136 | MS.gene98278:CDS | 25.0% |
| !! | AAATTTAGAGTTTAATGAGC+TGG | + | chr3.1:61575987-61576006 | MS.gene98278:intron | 25.0% |
| !! | AAGACAAAAAAAAGTATGTC+TGG | + | chr3.1:61574968-61574987 | MS.gene98278:CDS | 25.0% |
| !! | ACTTCATGCTGTAATATTTT+AGG | + | chr3.1:61577993-61578012 | MS.gene98278:intron | 25.0% |
| !! | ATACTCATTGTCTAAAATGT+CGG | + | chr3.1:61574712-61574731 | MS.gene98278:CDS | 25.0% |
| !! | CTTCATGCTGTAATATTTTA+GGG | + | chr3.1:61577994-61578013 | MS.gene98278:intron | 25.0% |
| !! | TAATGAATTTTTCTGTATGC+TGG | + | chr3.1:61577432-61577451 | MS.gene98278:intron | 25.0% |
| !! | TTGATGACATTGAAATAATC+CGG | - | chr3.1:61575139-61575158 | None:intergenic | 25.0% |
| !!! | AGACATACTTTTTTTTGTCT+TGG | - | chr3.1:61574969-61574988 | None:intergenic | 25.0% |
| !!! | CGGTTTTTTAACAAAGAAAA+TGG | - | chr3.1:61577632-61577651 | None:intergenic | 25.0% |
| !!! | GACATACTTTTTTTTGTCTT+GGG | - | chr3.1:61574968-61574987 | None:intergenic | 25.0% |
| !!! | GCTAAATTGAAAGTATCATA+AGG | - | chr3.1:61575914-61575933 | None:intergenic | 25.0% |
| !!! | GTCATTTTCTTCTTTTTTGT+GGG | - | chr3.1:61575439-61575458 | None:intergenic | 25.0% |
| !!! | TCATTTTCTTCTTTTTTGTG+GGG | - | chr3.1:61575438-61575457 | None:intergenic | 25.0% |
| !!! | TGTCATTTTCTTCTTTTTTG+TGG | - | chr3.1:61575440-61575459 | None:intergenic | 25.0% |
| !!! | TTCATGCTGTAATATTTTAG+GGG | + | chr3.1:61577995-61578014 | MS.gene98278:intron | 25.0% |
| AAAATTGACACTGAAACATC+TGG | - | chr3.1:61576855-61576874 | None:intergenic | 30.0% | |
| AAATACACCAAGTTTCAAAG+AGG | + | chr3.1:61578914-61578933 | MS.gene98278:CDS | 30.0% | |
| AAGAAACTATAATATGCGCA+TGG | - | chr3.1:61577768-61577787 | None:intergenic | 30.0% | |
| AAGAAATCAAGAATGGAATC+AGG | - | chr3.1:61575565-61575584 | None:intergenic | 30.0% | |
| AAGCTTACGTAATTTGAACA+GGG | - | chr3.1:61575668-61575687 | None:intergenic | 30.0% | |
| AATGAGCAAGAAAGCAATAA+AGG | - | chr3.1:61577819-61577838 | None:intergenic | 30.0% | |
| ACTTATTGAGTATACACTTC+TGG | - | chr3.1:61577091-61577110 | None:intergenic | 30.0% | |
| AGTATGAATTCGAACATTGT+TGG | + | chr3.1:61574812-61574831 | MS.gene98278:CDS | 30.0% | |
| AGTGGAGGATAATTTGAATT+AGG | - | chr3.1:61576501-61576520 | None:intergenic | 30.0% | |
| ATGCGCATATTATAGTTTCT+TGG | + | chr3.1:61577767-61577786 | MS.gene98278:intron | 30.0% | |
| ATTCTCAATCACAAGTTATG+GGG | + | chr3.1:61574477-61574496 | MS.gene98278:CDS | 30.0% | |
| CAATAATAGAAATTCCCTAC+TGG | - | chr3.1:61578293-61578312 | None:intergenic | 30.0% | |
| CTCTTTCAAGAAATCAAGAA+TGG | - | chr3.1:61575572-61575591 | None:intergenic | 30.0% | |
| GAACTATAGGAGAAACTATT+AGG | + | chr3.1:61575962-61575981 | MS.gene98278:intron | 30.0% | |
| GACAATGAGTATAGTTGAAA+CGG | - | chr3.1:61574704-61574723 | None:intergenic | 30.0% | |
| GTACACAATTTACCTTTAGA+AGG | - | chr3.1:61576320-61576339 | None:intergenic | 30.0% | |
| GTATTCTCAATCACAAGTTA+TGG | + | chr3.1:61574475-61574494 | MS.gene98278:CDS | 30.0% | |
| GTGTATACTCAATAAGTTGT+TGG | + | chr3.1:61577094-61577113 | MS.gene98278:intron | 30.0% | |
| TATGAATTGCAGGAAAATGT+GGG | + | chr3.1:61577653-61577672 | MS.gene98278:intron | 30.0% | |
| TGAAAGAATTATGACTGACA+TGG | + | chr3.1:61575492-61575511 | MS.gene98278:CDS | 30.0% | |
| TGGTAAATATTCAAATCCCA+TGG | + | chr3.1:61575201-61575220 | MS.gene98278:CDS | 30.0% | |
| TGTATAGATTCAACTAACCT+GGG | + | chr3.1:61577849-61577868 | MS.gene98278:intron | 30.0% | |
| TTCAATTTAACAACATCGAC+TGG | - | chr3.1:61575112-61575131 | None:intergenic | 30.0% | |
| TTGTATAGATTCAACTAACC+TGG | + | chr3.1:61577848-61577867 | MS.gene98278:intron | 30.0% | |
| TTGTGATTGAGAATACTTTC+TGG | - | chr3.1:61574471-61574490 | None:intergenic | 30.0% | |
| ! | AGAGAAAGAATTTGAAATCG+AGG | + | chr3.1:61574741-61574760 | MS.gene98278:CDS | 30.0% |
| ! | ATCAAACAACCAATGGATTT+GGG | + | chr3.1:61575154-61575173 | MS.gene98278:CDS | 30.0% |
| ! | ATCATCAAAATGGATTTGGT+GGG | + | chr3.1:61578952-61578971 | MS.gene98278:CDS | 30.0% |
| ! | ATTTGAAATCGAGGTTGATT+TGG | + | chr3.1:61574750-61574769 | MS.gene98278:CDS | 30.0% |
| ! | ATTTGTTGCAGTAATAGACT+AGG | + | chr3.1:61578170-61578189 | MS.gene98278:intron | 30.0% |
| ! | CGTAAACTATCATTTTATGC+AGG | + | chr3.1:61576190-61576209 | MS.gene98278:intron | 30.0% |
| ! | CTAAAATATTGATTAGGAGC+CGG | - | chr3.1:61576791-61576810 | None:intergenic | 30.0% |
| ! | CTTAGTAAAGCCTTTGAAAA+AGG | + | chr3.1:61575310-61575329 | MS.gene98278:CDS | 30.0% |
| ! | GATGATCATCAAAATGGATT+TGG | + | chr3.1:61578948-61578967 | MS.gene98278:CDS | 30.0% |
| ! | TAAAATATTGATTAGGAGCC+GGG | - | chr3.1:61576790-61576809 | None:intergenic | 30.0% |
| ! | TTTGAAATCGAGGTTGATTT+GGG | + | chr3.1:61574751-61574770 | MS.gene98278:CDS | 30.0% |
| ! | TTTTGTCCAGCAAAATCTAT+GGG | - | chr3.1:61574443-61574462 | None:intergenic | 30.0% |
| !! | AATCCATTTTGATGATCATC+TGG | - | chr3.1:61578948-61578967 | None:intergenic | 30.0% |
| !! | ATCCATTTTGATGATCATCT+GGG | - | chr3.1:61578947-61578966 | None:intergenic | 30.0% |
| !! | ATTTTCTTCTTTTTTGTGGG+GGG | - | chr3.1:61575436-61575455 | None:intergenic | 30.0% |
| !! | CATTTTCTTCTTTTTTGTGG+GGG | - | chr3.1:61575437-61575456 | None:intergenic | 30.0% |
| !! | TCAATAAGTTGTTGGTTTGT+TGG | + | chr3.1:61577102-61577121 | MS.gene98278:intron | 30.0% |
| !! | TCTACATAAGTAGGTTTTGA+AGG | - | chr3.1:61575391-61575410 | None:intergenic | 30.0% |
| !!! | ATTTTTCAAGCTTACCATCT+AGG | - | chr3.1:61577932-61577951 | None:intergenic | 30.0% |
| AAAAAACCGCTATGAATTGC+AGG | + | chr3.1:61577643-61577662 | MS.gene98278:intron | 35.0% | |
| AAAACCAGTAGCATAACCTT+TGG | - | chr3.1:61574519-61574538 | None:intergenic | 35.0% | |
| AACGAACGATGATGAAATTG+AGG | + | chr3.1:61575615-61575634 | MS.gene98278:CDS | 35.0% | |
| AATGGCAGAACTTTCATGAA+AGG | - | chr3.1:61578360-61578379 | None:intergenic | 35.0% | |
| AATGTAGCATATGAAGCCAT+TGG | - | chr3.1:61575022-61575041 | None:intergenic | 35.0% | |
| AATGTTGACACTTGTACCAT+AGG | - | chr3.1:61576384-61576403 | None:intergenic | 35.0% | |
| ACATCATCAGCAAAATCCAT+GGG | - | chr3.1:61575220-61575239 | None:intergenic | 35.0% | |
| ACTACTTGAATCTGAATCTG+TGG | - | chr3.1:61577489-61577508 | None:intergenic | 35.0% | |
| AGAAGACTATAAGCATATCC+TGG | - | chr3.1:61576647-61576666 | None:intergenic | 35.0% | |
| ATAATTCTTTCAGCAGGTTC+TGG | - | chr3.1:61575484-61575503 | None:intergenic | 35.0% | |
| ATGTTGACACTTGTACCATA+GGG | - | chr3.1:61576383-61576402 | None:intergenic | 35.0% | |
| CAAATTGATGAGACATCAGA+CGG | - | chr3.1:61575072-61575091 | None:intergenic | 35.0% | |
| CAACTATCTCATCAACAAAG+CGG | + | chr3.1:61576902-61576921 | MS.gene98278:intron | 35.0% | |
| CAATGTCATCAAACAACCAA+TGG | + | chr3.1:61575147-61575166 | MS.gene98278:CDS | 35.0% | |
| CATTAAAATTGACAAGCGTC+TGG | - | chr3.1:61577417-61577436 | None:intergenic | 35.0% | |
| CCACTAGAAATCGAAAAAGA+TGG | + | chr3.1:61576516-61576535 | MS.gene98278:CDS | 35.0% | |
| CTATAAGCATATCCTGGAAT+CGG | - | chr3.1:61576641-61576660 | None:intergenic | 35.0% | |
| CTATGAATTGCAGGAAAATG+TGG | + | chr3.1:61577652-61577671 | MS.gene98278:intron | 35.0% | |
| CTCTCTGATTCAATAGTATC+TGG | - | chr3.1:61577906-61577925 | None:intergenic | 35.0% | |
| CTTGACTTACGATCAAAACA+GGG | + | chr3.1:61577682-61577701 | MS.gene98278:CDS | 35.0% | |
| GAAGCTTACGTAATTTGAAC+AGG | - | chr3.1:61575669-61575688 | None:intergenic | 35.0% | |
| GAGTGAGAGGAATATCATTA+AGG | - | chr3.1:61576883-61576902 | None:intergenic | 35.0% | |
| GATGTCTCATCAATTTGGTT+GGG | + | chr3.1:61575075-61575094 | MS.gene98278:CDS | 35.0% | |
| GGAGGATAATTTGAATTAGG+CGG | - | chr3.1:61576498-61576517 | None:intergenic | 35.0% | |
| TAAACACGCATATACAAGTG+AGG | - | chr3.1:61576165-61576184 | None:intergenic | 35.0% | |
| TAATGAGCTGGATCCAAATA+TGG | + | chr3.1:61575999-61576018 | MS.gene98278:intron | 35.0% | |
| TACAATCCTAACTGCTCTAA+GGG | - | chr3.1:61578996-61579015 | None:intergenic | 35.0% | |
| TACGAAAGCCCATAAAGTTT+GGG | - | chr3.1:61577744-61577763 | None:intergenic | 35.0% | |
| TCAAGAGAAAACCCTTGAAA+AGG | + | chr3.1:61578109-61578128 | MS.gene98278:CDS | 35.0% | |
| TCAGATTCAAGTAGTTCATC+TGG | + | chr3.1:61577494-61577513 | MS.gene98278:CDS | 35.0% | |
| TCAGTCATAATTCTTTCAGC+AGG | - | chr3.1:61575490-61575509 | None:intergenic | 35.0% | |
| TGATGTCTCATCAATTTGGT+TGG | + | chr3.1:61575074-61575093 | MS.gene98278:CDS | 35.0% | |
| TGCAGCTTCTTAATGAATCA+GGG | + | chr3.1:61576273-61576292 | MS.gene98278:intron | 35.0% | |
| TTACGAAAGCCCATAAAGTT+TGG | - | chr3.1:61577745-61577764 | None:intergenic | 35.0% | |
| TTATCTGACTGTTGCAATTG+TGG | + | chr3.1:61577461-61577480 | MS.gene98278:intron | 35.0% | |
| TTGACTTACGATCAAAACAG+GGG | + | chr3.1:61577683-61577702 | MS.gene98278:CDS | 35.0% | |
| TTTCTCTTGAGCTTTCAGTA+TGG | - | chr3.1:61578099-61578118 | None:intergenic | 35.0% | |
| TTTCTTTCAGACATCACATC+TGG | + | chr3.1:61577045-61577064 | MS.gene98278:intron | 35.0% | |
| TTTGATATGTTTCCGATTCC+AGG | + | chr3.1:61576626-61576645 | MS.gene98278:intron | 35.0% | |
| ! | ATTGTCTAAAATGTCGGCTA+TGG | + | chr3.1:61574718-61574737 | MS.gene98278:CDS | 35.0% |
| ! | CATAGATTTTGCTGGACAAA+AGG | + | chr3.1:61574442-61574461 | MS.gene98278:CDS | 35.0% |
| ! | CATCAAACAACCAATGGATT+TGG | + | chr3.1:61575153-61575172 | MS.gene98278:CDS | 35.0% |
| ! | CATTTTCCTGCAATTCATAG+CGG | - | chr3.1:61577652-61577671 | None:intergenic | 35.0% |
| ! | CCCTTAACAAACCTTTTCAA+GGG | - | chr3.1:61578123-61578142 | None:intergenic | 35.0% |
| ! | CGGCTCCTAATCAATATTTT+AGG | + | chr3.1:61576789-61576808 | MS.gene98278:intron | 35.0% |
| ! | CTTTTGTCCAGCAAAATCTA+TGG | - | chr3.1:61574444-61574463 | None:intergenic | 35.0% |
| ! | GATCATCAAAATGGATTTGG+TGG | + | chr3.1:61578951-61578970 | MS.gene98278:CDS | 35.0% |
| ! | GCTTCTTGATGATTATTTGC+TGG | + | chr3.1:61575684-61575703 | MS.gene98278:intron | 35.0% |
| ! | GGCATTTGGAGTGAAAATAA+AGG | - | chr3.1:61576426-61576445 | None:intergenic | 35.0% |
| ! | GTAAAGCCTTTGAAAAAGGA+TGG | + | chr3.1:61575314-61575333 | MS.gene98278:CDS | 35.0% |
| ! | TTATTTTCACTCCAAATGCC+AGG | + | chr3.1:61576426-61576445 | MS.gene98278:intron | 35.0% |
| ! | TTTACCTTTAGAAGGTTGCA+TGG | - | chr3.1:61576312-61576331 | None:intergenic | 35.0% |
| !! | ACCCTTGAAAAGGTTTGTTA+AGG | + | chr3.1:61578119-61578138 | MS.gene98278:intron | 35.0% |
| !! | ATGCTGTAATATTTTAGGGG+AGG | + | chr3.1:61577998-61578017 | MS.gene98278:intron | 35.0% |
| !! | CCCTTGAAAAGGTTTGTTAA+GGG | + | chr3.1:61578120-61578139 | MS.gene98278:intron | 35.0% |
| !! | CCTTGAAAAGGTTTGTTAAG+GGG | + | chr3.1:61578121-61578140 | MS.gene98278:intron | 35.0% |
| !! | CTCTTAGTTCTAAGGTGATT+GGG | + | chr3.1:61577549-61577568 | MS.gene98278:intron | 35.0% |
| !! | CTTGAAAAGGTTTGTTAAGG+GGG | + | chr3.1:61578122-61578141 | MS.gene98278:intron | 35.0% |
| !! | TCTTAGTTCTAAGGTGATTG+GGG | + | chr3.1:61577550-61577569 | MS.gene98278:intron | 35.0% |
| !! | TGCTGTAATATTTTAGGGGA+GGG | + | chr3.1:61577999-61578018 | MS.gene98278:intron | 35.0% |
| !! | TTGAAAAGGTTTGTTAAGGG+GGG | + | chr3.1:61578123-61578142 | MS.gene98278:intron | 35.0% |
| !!! | CCATCTTTTTCGATTTCTAG+TGG | - | chr3.1:61576519-61576538 | None:intergenic | 35.0% |
| !!! | TCTTGGCATGTTTTTTGATG+AGG | + | chr3.1:61577784-61577803 | MS.gene98278:intron | 35.0% |
| !!! | TCTTTTTCGATTTCTAGTGG+AGG | - | chr3.1:61576516-61576535 | None:intergenic | 35.0% |
| !!! | TTGTCGATTTTCTACTTGCT+TGG | + | chr3.1:61577210-61577229 | MS.gene98278:intron | 35.0% |
| AAACCAAGTTGCTTCCTGTT+CGG | - | chr3.1:61574647-61574666 | None:intergenic | 40.0% | |
| AGCAAGAAAGCAATAAAGGC+GGG | - | chr3.1:61577815-61577834 | None:intergenic | 40.0% | |
| AGCCCAGATGATCATCAAAA+TGG | + | chr3.1:61578942-61578961 | MS.gene98278:CDS | 40.0% | |
| AGCTGAAGCCAAAAGAAAGA+GGG | + | chr3.1:61578702-61578721 | MS.gene98278:CDS | 40.0% | |
| AGTAATCCCGAAACTGGAAA+TGG | + | chr3.1:61577713-61577732 | MS.gene98278:CDS | 40.0% | |
| ATCTCATCAACAAAGCGGTA+TGG | + | chr3.1:61576907-61576926 | MS.gene98278:intron | 40.0% | |
| CAACAATTTCAGCCAAAAGC+TGG | + | chr3.1:61575712-61575731 | MS.gene98278:intron | 40.0% | |
| CACATCATCAGCAAAATCCA+TGG | - | chr3.1:61575221-61575240 | None:intergenic | 40.0% | |
| CCAATCACCTTAGAACTAAG+AGG | - | chr3.1:61577551-61577570 | None:intergenic | 40.0% | |
| CCATCGAAAGATGTAGAAGA+AGG | + | chr3.1:61579071-61579090 | MS.gene98278:CDS | 40.0% | |
| CCTTCTTCTACATCTTTCGA+TGG | - | chr3.1:61579074-61579093 | None:intergenic | 40.0% | |
| CGTCTGATGTCTCATCAATT+TGG | + | chr3.1:61575070-61575089 | MS.gene98278:CDS | 40.0% | |
| GAAATTGAGTCAACAGTTGG+AGG | + | chr3.1:61575522-61575541 | MS.gene98278:CDS | 40.0% | |
| GAGCAAGAAAGCAATAAAGG+CGG | - | chr3.1:61577816-61577835 | None:intergenic | 40.0% | |
| GCAAAATCTATGGGAACAGT+TGG | - | chr3.1:61574434-61574453 | None:intergenic | 40.0% | |
| GCAATGACTTATAATCCACC+TGG | + | chr3.1:61575259-61575278 | MS.gene98278:CDS | 40.0% | |
| GCAGAAATTGAGTCAACAGT+TGG | + | chr3.1:61575519-61575538 | MS.gene98278:CDS | 40.0% | |
| GCAGTTAGGATTGTACATGA+AGG | + | chr3.1:61579001-61579020 | MS.gene98278:CDS | 40.0% | |
| GCTTGACTTACGATCAAAAC+AGG | + | chr3.1:61577681-61577700 | MS.gene98278:CDS | 40.0% | |
| GTACAATCCTAACTGCTCTA+AGG | - | chr3.1:61578997-61579016 | None:intergenic | 40.0% | |
| GTGAAGAGTAGGATAACATC+TGG | + | chr3.1:61575181-61575200 | MS.gene98278:CDS | 40.0% | |
| GTGCAGCTTCTTAATGAATC+AGG | + | chr3.1:61576272-61576291 | MS.gene98278:intron | 40.0% | |
| TACACCAAGTTTCAAAGAGG+AGG | + | chr3.1:61578917-61578936 | MS.gene98278:CDS | 40.0% | |
| TACTCCAAAGGTTATGCTAC+TGG | + | chr3.1:61574512-61574531 | MS.gene98278:CDS | 40.0% | |
| TCATCCATGCAACCTTCTAA+AGG | + | chr3.1:61576305-61576324 | MS.gene98278:CDS | 40.0% | |
| TGACTTACGATCAAAACAGG+GGG | + | chr3.1:61577684-61577703 | MS.gene98278:CDS | 40.0% | |
| TGATGAGATAGTTGAGTGAG+AGG | - | chr3.1:61576896-61576915 | None:intergenic | 40.0% | |
| TTCACAGTACCCAAATCCAT+TGG | - | chr3.1:61575166-61575185 | None:intergenic | 40.0% | |
| TTCATGAAAGGCAGCAATGA+TGG | - | chr3.1:61578348-61578367 | None:intergenic | 40.0% | |
| TTGAAAGGTAACGACGGATA+TGG | + | chr3.1:61574665-61574684 | MS.gene98278:CDS | 40.0% | |
| TTTCAAGCTTACCATCTAGG+TGG | - | chr3.1:61577929-61577948 | None:intergenic | 40.0% | |
| TTTCCAGTTTCGGGATTACT+AGG | - | chr3.1:61577713-61577732 | None:intergenic | 40.0% | |
| ! | ACTGTTCCCATAGATTTTGC+TGG | + | chr3.1:61574434-61574453 | MS.gene98278:CDS | 40.0% |
| ! | AGGAAGCAACTTGGTTTGAA+AGG | + | chr3.1:61574650-61574669 | MS.gene98278:CDS | 40.0% |
| ! | ATTTGGGTACTGTGAAGAGT+AGG | + | chr3.1:61575170-61575189 | MS.gene98278:CDS | 40.0% |
| ! | CAACGAGAGCTGTCAATTTT+TGG | + | chr3.1:61578857-61578876 | MS.gene98278:CDS | 40.0% |
| ! | CCCCTTAACAAACCTTTTCA+AGG | - | chr3.1:61578124-61578143 | None:intergenic | 40.0% |
| ! | CTTGGTTTGAAAGGTAACGA+CGG | + | chr3.1:61574659-61574678 | MS.gene98278:CDS | 40.0% |
| ! | GACAGGAATTTTCTTCTCGA+TGG | - | chr3.1:61575344-61575363 | None:intergenic | 40.0% |
| ! | GCTCAATCCTAAGCTTTTCA+GGG | - | chr3.1:61578446-61578465 | None:intergenic | 40.0% |
| ! | TTACATTTTGCAAAGCCTGC+CGG | - | chr3.1:61578747-61578766 | None:intergenic | 40.0% |
| ! | TTTTGATCGTAAGTCAAGCC+AGG | - | chr3.1:61577680-61577699 | None:intergenic | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | - | chr3.1:61576068-61576087 | None:intergenic | 40.0% |
| !! | ACAGCTCTCGTTGATTTCAA+CGG | - | chr3.1:61578850-61578869 | None:intergenic | 40.0% |
| !! | ATTTGGTTTGTACGACAGCA+AGG | - | chr3.1:61576724-61576743 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | - | chr3.1:61576069-61576088 | None:intergenic | 40.0% |
| !! | CCTCTTAGTTCTAAGGTGAT+TGG | + | chr3.1:61577548-61577567 | MS.gene98278:intron | 40.0% |
| !! | GTCAGAACCTCTTAGTTCTA+AGG | + | chr3.1:61577541-61577560 | MS.gene98278:CDS | 40.0% |
| !! | TCTACCGTCGAGCTTTATTA+AGG | + | chr3.1:61578057-61578076 | MS.gene98278:CDS | 40.0% |
| !! | TGAAAAGGTTTGTTAAGGGG+GGG | + | chr3.1:61578124-61578143 | MS.gene98278:intron | 40.0% |
| !! | TGGATTTTGCTGATGATGTG+AGG | + | chr3.1:61575221-61575240 | MS.gene98278:CDS | 40.0% |
| !! | TTTGGTTTGTACGACAGCAA+GGG | - | chr3.1:61576723-61576742 | None:intergenic | 40.0% |
| !!! | GGACTTCCATCCTTTTTCAA+AGG | - | chr3.1:61575323-61575342 | None:intergenic | 40.0% |
| !!! | TAGGTTTTGAAGGCTCAGAT+GGG | - | chr3.1:61575381-61575400 | None:intergenic | 40.0% |
| !!! | TCTTTTTTGTGGGGGGAATT+GGG | - | chr3.1:61575429-61575448 | None:intergenic | 40.0% |
| !!! | TTCTTTTTTGTGGGGGGAAT+TGG | - | chr3.1:61575430-61575449 | None:intergenic | 40.0% |
| AACGTGACCCTGAAAAGCTT+AGG | + | chr3.1:61578436-61578455 | MS.gene98278:CDS | 45.0% | |
| AATCCCGAAACTGGAAATGG+TGG | + | chr3.1:61577716-61577735 | MS.gene98278:intron | 45.0% | |
| ACACAGTATACGGCAAGCAT+CGG | + | chr3.1:61574901-61574920 | MS.gene98278:CDS | 45.0% | |
| ATCCCGAAACTGGAAATGGT+GGG | + | chr3.1:61577717-61577736 | MS.gene98278:intron | 45.0% | |
| ATGCTTGCCGTATACTGTGT+TGG | - | chr3.1:61574901-61574920 | None:intergenic | 45.0% | |
| CAAAGCGGTATGGTGTAAAG+TGG | + | chr3.1:61576917-61576936 | MS.gene98278:intron | 45.0% | |
| CAACAGTTGGAGGATATGCT+TGG | + | chr3.1:61575532-61575551 | MS.gene98278:CDS | 45.0% | |
| CAACCCCACTTAGTGGAATA+AGG | + | chr3.1:61576062-61576081 | MS.gene98278:intron | 45.0% | |
| CAAGTGAGGATGTGCTTACA+CGG | - | chr3.1:61576151-61576170 | None:intergenic | 45.0% | |
| CAAGTGATGTTGCATCCCTA+TGG | + | chr3.1:61576365-61576384 | MS.gene98278:intron | 45.0% | |
| CAGCTGAAGCCAAAAGAAAG+AGG | + | chr3.1:61578701-61578720 | MS.gene98278:CDS | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr3.1:61576067-61576086 | MS.gene98278:intron | 45.0% | |
| CGTCATGTGGTAGAGACTAT+GGG | + | chr3.1:61574551-61574570 | MS.gene98278:CDS | 45.0% | |
| CTTATTCCACTAAGTGGGGT+TGG | - | chr3.1:61576064-61576083 | None:intergenic | 45.0% | |
| GACTAAACTAGCTGCAACTG+AGG | - | chr3.1:61577007-61577026 | None:intergenic | 45.0% | |
| GACTTACGATCAAAACAGGG+GGG | + | chr3.1:61577685-61577704 | MS.gene98278:CDS | 45.0% | |
| GATCCTAGTAATCCCGAAAC+TGG | + | chr3.1:61577707-61577726 | MS.gene98278:CDS | 45.0% | |
| GCTGTTCAGTGAAACATACC+AGG | - | chr3.1:61578806-61578825 | None:intergenic | 45.0% | |
| GGAAATCCCTTAGAGCAGTT+AGG | + | chr3.1:61578987-61579006 | MS.gene98278:CDS | 45.0% | |
| GGCTCCTTAATAAAGCTCGA+CGG | - | chr3.1:61578064-61578083 | None:intergenic | 45.0% | |
| TATCTCCGTCGAGTGACATA+AGG | + | chr3.1:61574837-61574856 | MS.gene98278:CDS | 45.0% | |
| TATGCACTAACACGAACCAC+TGG | - | chr3.1:61576604-61576623 | None:intergenic | 45.0% | |
| TCCAAAAACTGCTGCACCAA+TGG | + | chr3.1:61575003-61575022 | MS.gene98278:CDS | 45.0% | |
| TCGTCATGTGGTAGAGACTA+TGG | + | chr3.1:61574550-61574569 | MS.gene98278:CDS | 45.0% | |
| TCTACCACATGACGAAACTC+AGG | - | chr3.1:61574545-61574564 | None:intergenic | 45.0% | |
| TGAACAGCTCTGTTTGCAGA+TGG | + | chr3.1:61578818-61578837 | MS.gene98278:intron | 45.0% | |
| TGATGTGCACAGCATAGCAT+TGG | + | chr3.1:61575285-61575304 | MS.gene98278:CDS | 45.0% | |
| TGGAGAGCCAACACAGTATA+CGG | + | chr3.1:61574891-61574910 | MS.gene98278:CDS | 45.0% | |
| TGTTCCTGAGTTTCGTCATG+TGG | + | chr3.1:61574538-61574557 | MS.gene98278:CDS | 45.0% | |
| TTCAACTAACCTGGGTATCC+AGG | + | chr3.1:61577857-61577876 | MS.gene98278:CDS | 45.0% | |
| TTGAGCGAGAAGAACTTGAG+AGG | + | chr3.1:61578460-61578479 | MS.gene98278:CDS | 45.0% | |
| TTGTCTCTGTCTCACCAGTA+GGG | + | chr3.1:61578276-61578295 | MS.gene98278:intron | 45.0% | |
| TTGTTAAGGGGGGGGTAATA+TGG | + | chr3.1:61578133-61578152 | MS.gene98278:intron | 45.0% | |
| TTTGTCTCTGTCTCACCAGT+AGG | + | chr3.1:61578275-61578294 | MS.gene98278:intron | 45.0% | |
| ! | AGCAGCTCTAGTAGTGAATC+TGG | + | chr3.1:61576570-61576589 | MS.gene98278:CDS | 45.0% |
| ! | AGGGGTCTTTTCTTACCATG+TGG | - | chr3.1:61574929-61574948 | None:intergenic | 45.0% |
| ! | CGCTCAATCCTAAGCTTTTC+AGG | - | chr3.1:61578447-61578466 | None:intergenic | 45.0% |
| ! | GTTTCACACTGTCCAGCTTT+TGG | - | chr3.1:61575727-61575746 | None:intergenic | 45.0% |
| ! | TACATTTTGCAAAGCCTGCC+GGG | - | chr3.1:61578746-61578765 | None:intergenic | 45.0% |
| ! | TCAGTATGGTGTCAGCAAAC+CGG | - | chr3.1:61578085-61578104 | None:intergenic | 45.0% |
| ! | TGGTGGGTCCCAAACTTTAT+GGG | + | chr3.1:61577733-61577752 | MS.gene98278:intron | 45.0% |
| !! | ATGGTGGGTCCCAAACTTTA+TGG | + | chr3.1:61577732-61577751 | MS.gene98278:intron | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr3.1:61576070-61576089 | None:intergenic | 45.0% |
| !! | GAAAAGGTTTGTTAAGGGGG+GGG | + | chr3.1:61578125-61578144 | MS.gene98278:intron | 45.0% |
| !! | GGCTTGGTAAAAGTGTCGTT+TGG | - | chr3.1:61575463-61575482 | None:intergenic | 45.0% |
| !! | GTACATGAAGGTTGATGACG+AGG | + | chr3.1:61579013-61579032 | MS.gene98278:CDS | 45.0% |
| !! | GTCGAGCTTTATTAAGGAGC+CGG | + | chr3.1:61578063-61578082 | MS.gene98278:CDS | 45.0% |
| !!! | GTAGGTTTTGAAGGCTCAGA+TGG | - | chr3.1:61575382-61575401 | None:intergenic | 45.0% |
| AAAGAGCAAAGTCGCATCGC+AGG | + | chr3.1:61575586-61575605 | MS.gene98278:CDS | 50.0% | |
| AGAACTTGAGAGGAGGCAGA+AGG | + | chr3.1:61578470-61578489 | MS.gene98278:CDS | 50.0% | |
| AGACTATGGGTGAGTCGGAT+GGG | + | chr3.1:61574564-61574583 | MS.gene98278:CDS | 50.0% | |
| AGAGGCAAAAGCTGCAGAAG+AGG | + | chr3.1:61578651-61578670 | MS.gene98278:CDS | 50.0% | |
| AGCCAAAAGAAAGAGGGAGC+TGG | + | chr3.1:61578708-61578727 | MS.gene98278:CDS | 50.0% | |
| AGCGAGAAGAACTTGAGAGG+AGG | + | chr3.1:61578463-61578482 | MS.gene98278:CDS | 50.0% | |
| AGCTGGACAGTGTGAAACAG+AGG | + | chr3.1:61575729-61575748 | MS.gene98278:intron | 50.0% | |
| AGGCAATGAACTGGTTGAGG+AGG | + | chr3.1:61576446-61576465 | MS.gene98278:intron | 50.0% | |
| ATGCTGTGCACATCATTGCC+AGG | - | chr3.1:61575280-61575299 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | + | chr3.1:61576055-61576074 | MS.gene98278:intron | 50.0% | |
| CAGCTCCTTATGTCACTCGA+CGG | - | chr3.1:61574845-61574864 | None:intergenic | 50.0% | |
| CCAAATGCCAGGCAATGAAC+TGG | + | chr3.1:61576437-61576456 | MS.gene98278:intron | 50.0% | |
| CCAGTTCATTGCCTGGCATT+TGG | - | chr3.1:61576440-61576459 | None:intergenic | 50.0% | |
| CTGATTCCTATGCACCGAAC+AGG | + | chr3.1:61574630-61574649 | MS.gene98278:CDS | 50.0% | |
| CTGGCTTAGTCTGCAAACTC+TGG | - | chr3.1:61577887-61577906 | None:intergenic | 50.0% | |
| CTTCTGCTTCAGCTTTCCTC+CGG | - | chr3.1:61578678-61578697 | None:intergenic | 50.0% | |
| GAAAGCTCGATTGCAAGCAG+AGG | + | chr3.1:61578633-61578652 | MS.gene98278:CDS | 50.0% | |
| GAATCAGAGAGCCACCTAGA+TGG | + | chr3.1:61577915-61577934 | MS.gene98278:CDS | 50.0% | |
| GACATAAGGAGCTGCAGTGT+GGG | + | chr3.1:61574851-61574870 | MS.gene98278:CDS | 50.0% | |
| GACCCACCATTTCCAGTTTC+GGG | - | chr3.1:61577722-61577741 | None:intergenic | 50.0% | |
| GGACCCACCATTTCCAGTTT+CGG | - | chr3.1:61577723-61577742 | None:intergenic | 50.0% | |
| GGGACACGATGATCAATGAC+AGG | - | chr3.1:61575361-61575380 | None:intergenic | 50.0% | |
| GGGGGGTAATATGGTAGTTG+AGG | + | chr3.1:61578142-61578161 | MS.gene98278:intron | 50.0% | |
| GGTAGAGACTATGGGTGAGT+CGG | + | chr3.1:61574559-61574578 | MS.gene98278:CDS | 50.0% | |
| GGTGTAAAGTGGTTGCCAGT+AGG | + | chr3.1:61576928-61576947 | MS.gene98278:intron | 50.0% | |
| GTAAGAAAAGACCCCTGCCA+GGG | + | chr3.1:61574933-61574952 | MS.gene98278:CDS | 50.0% | |
| TAGGAATCAGCCGATGCAGT+CGG | - | chr3.1:61574620-61574639 | None:intergenic | 50.0% | |
| TCCTCAACCAGTTCATTGCC+TGG | - | chr3.1:61576447-61576466 | None:intergenic | 50.0% | |
| TGACATAAGGAGCTGCAGTG+TGG | + | chr3.1:61574850-61574869 | MS.gene98278:CDS | 50.0% | |
| TGATATGGAGCCGACTGCAT+CGG | + | chr3.1:61574607-61574626 | MS.gene98278:CDS | 50.0% | |
| TTCTGCTTCAGCTTTCCTCC+GGG | - | chr3.1:61578677-61578696 | None:intergenic | 50.0% | |
| TTGCAGGAAAATGTGGGACC+TGG | + | chr3.1:61577659-61577678 | MS.gene98278:intron | 50.0% | |
| TTTGGTGGGATCAAGCTGCA+GGG | + | chr3.1:61578966-61578985 | MS.gene98278:CDS | 50.0% | |
| ! | ATTTGGTGGGATCAAGCTGC+AGG | + | chr3.1:61578965-61578984 | MS.gene98278:CDS | 50.0% |
| ! | CTCCAGCTCCCTCTTTCTTT+TGG | - | chr3.1:61578713-61578732 | None:intergenic | 50.0% |
| ! | GAATCTGGCTCATCATCCAG+TGG | + | chr3.1:61576585-61576604 | MS.gene98278:CDS | 50.0% |
| ! | GCCATTGGTGCAGCAGTTTT+TGG | - | chr3.1:61575007-61575026 | None:intergenic | 50.0% |
| ! | TCTTTCAGCAGGTTCTGGCT+TGG | - | chr3.1:61575479-61575498 | None:intergenic | 50.0% |
| !! | CTCGCCTCCTCTTTGAAACT+TGG | - | chr3.1:61578924-61578943 | None:intergenic | 50.0% |
| !! | GAAGGTTGATGACGAGGATG+AGG | + | chr3.1:61579019-61579038 | MS.gene98278:CDS | 50.0% |
| !! | TTGCTTCCTGTTCGGTGCAT+AGG | - | chr3.1:61574639-61574658 | None:intergenic | 50.0% |
| AGCAAAGTCGCATCGCAGGA+GGG | + | chr3.1:61575590-61575609 | MS.gene98278:CDS | 55.0% | |
| CAAAAGCTGCAGAAGAGGCC+CGG | + | chr3.1:61578656-61578675 | MS.gene98278:CDS | 55.0% | |
| CTGTGCACATCATTGCCAGG+TGG | - | chr3.1:61575277-61575296 | None:intergenic | 55.0% | |
| CTTGAGAGGAGGCAGAAGGA+AGG | + | chr3.1:61578474-61578493 | MS.gene98278:CDS | 55.0% | |
| GAGACTATGGGTGAGTCGGA+TGG | + | chr3.1:61574563-61574582 | MS.gene98278:CDS | 55.0% | |
| GCACCGAACAGGAAGCAACT+TGG | + | chr3.1:61574641-61574660 | MS.gene98278:CDS | 55.0% | |
| GCCAGGCAATGAACTGGTTG+AGG | + | chr3.1:61576443-61576462 | MS.gene98278:intron | 55.0% | |
| GCTCGACGGTAGAGAGTTTC+AGG | - | chr3.1:61578050-61578069 | None:intergenic | 55.0% | |
| GCTGCAGTGTGGGACAGAAA+AGG | + | chr3.1:61574861-61574880 | MS.gene98278:CDS | 55.0% | |
| GGTAAGAAAAGACCCCTGCC+AGG | + | chr3.1:61574932-61574951 | MS.gene98278:CDS | 55.0% | |
| TATGGGTGAGTCGGATGGGT+TGG | + | chr3.1:61574568-61574587 | MS.gene98278:CDS | 55.0% | |
| TCTGCAAACTCTGGTCAGCC+TGG | - | chr3.1:61577878-61577897 | None:intergenic | 55.0% | |
| TGAACTGGTTGAGGAGGACG+TGG | + | chr3.1:61576452-61576471 | MS.gene98278:CDS | 55.0% | |
| ! | ATGGGTGAGTCGGATGGGTT+GGG | + | chr3.1:61574569-61574588 | MS.gene98278:CDS | 55.0% |
| ! | TGATGACGAGGATGAGGAGG+AGG | + | chr3.1:61579025-61579044 | MS.gene98278:CDS | 55.0% |
| !! | GGTTGATGACGAGGATGAGG+AGG | + | chr3.1:61579022-61579041 | MS.gene98278:CDS | 55.0% |
| !! | TAGCTCGGGGAGGGTTGATA+TGG | + | chr3.1:61574592-61574611 | MS.gene98278:CDS | 55.0% |
| AGCTGGAGAGAGAAGCAGCC+CGG | + | chr3.1:61578725-61578744 | MS.gene98278:CDS | 60.0% | |
| GAGCAAAGTCGCATCGCAGG+AGG | + | chr3.1:61575589-61575608 | MS.gene98278:CDS | 60.0% | |
| GAGGACGTGGACATCGTTGG+TGG | + | chr3.1:61576465-61576484 | MS.gene98278:CDS | 60.0% | |
| GAGGAGGACGTGGACATCGT+TGG | + | chr3.1:61576462-61576481 | MS.gene98278:CDS | 60.0% | |
| GGGACAGAAAAGGCCTCAGC+TGG | + | chr3.1:61574871-61574890 | MS.gene98278:CDS | 60.0% | |
| TCTGGTCAGCCTGGATACCC+AGG | - | chr3.1:61577869-61577888 | None:intergenic | 60.0% | |
| ! | GATGGCTCTGCAGCACTCTG+AGG | - | chr3.1:61579056-61579075 | None:intergenic | 60.0% |
| !! | CTGTGTTGGCTCTCCAGCTG+AGG | - | chr3.1:61574887-61574906 | None:intergenic | 60.0% |
| !! | GGGAGGGTGTTGCGTCTAAG+AGG | + | chr3.1:61578015-61578034 | MS.gene98278:CDS | 60.0% |
| !! | GTCGGATGGGTTGGGTAGCT+CGG | + | chr3.1:61574577-61574596 | MS.gene98278:CDS | 60.0% |
| !! | TCGGATGGGTTGGGTAGCTC+GGG | + | chr3.1:61574578-61574597 | MS.gene98278:CDS | 60.0% |
| AAGCTGCAGAAGAGGCCCGG+AGG | + | chr3.1:61578659-61578678 | MS.gene98278:CDS | 65.0% | |
| GTCTTGGGACCACTACGCCC+TGG | - | chr3.1:61574953-61574972 | None:intergenic | 65.0% | |
| ! | TGGGTTGGGTAGCTCGGGGA+GGG | + | chr3.1:61574583-61574602 | MS.gene98278:CDS | 65.0% |
| !! | ATGGGTTGGGTAGCTCGGGG+AGG | + | chr3.1:61574582-61574601 | MS.gene98278:CDS | 65.0% |
| !! | CGGATGGGTTGGGTAGCTCG+GGG | + | chr3.1:61574579-61574598 | MS.gene98278:CDS | 65.0% |
| !! | CGGCAAGCATCGGTGCCACA+TGG | + | chr3.1:61574911-61574930 | MS.gene98278:CDS | 65.0% |
| AGACCCCTGCCAGGGCGTAG+TGG | + | chr3.1:61574941-61574960 | MS.gene98278:CDS | 70.0% | |
| GGACCACTACGCCCTGGCAG+GGG | - | chr3.1:61574947-61574966 | None:intergenic | 70.0% | |
| GGAGAGAGAAGCAGCCCGGC+AGG | + | chr3.1:61578729-61578748 | MS.gene98278:CDS | 70.0% | |
| GGGACCACTACGCCCTGGCA+GGG | - | chr3.1:61574948-61574967 | None:intergenic | 70.0% | |
| TGGGACCACTACGCCCTGGC+AGG | - | chr3.1:61574949-61574968 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61574425 | 61579106 | 61574425 | ID=MS.gene98278 |
| chr3.1 | mRNA | 61574425 | 61579106 | 61574425 | ID=MS.gene98278.t1;Parent=MS.gene98278 |
| chr3.1 | exon | 61574425 | 61575636 | 61574425 | ID=MS.gene98278.t1.exon1;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61574425 | 61575636 | 61574425 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61576278 | 61576326 | 61576278 | ID=MS.gene98278.t1.exon2;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61576278 | 61576326 | 61576278 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61576448 | 61576606 | 61576448 | ID=MS.gene98278.t1.exon3;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61576448 | 61576606 | 61576448 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61577492 | 61577562 | 61577492 | ID=MS.gene98278.t1.exon4;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61577492 | 61577562 | 61577492 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61577665 | 61577734 | 61577665 | ID=MS.gene98278.t1.exon5;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61577665 | 61577734 | 61577665 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61577856 | 61577936 | 61577856 | ID=MS.gene98278.t1.exon6;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61577856 | 61577936 | 61577856 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61578015 | 61578130 | 61578015 | ID=MS.gene98278.t1.exon7;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61578015 | 61578130 | 61578015 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61578429 | 61578495 | 61578429 | ID=MS.gene98278.t1.exon8;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61578429 | 61578495 | 61578429 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61578632 | 61578762 | 61578632 | ID=MS.gene98278.t1.exon9;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61578632 | 61578762 | 61578632 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| chr3.1 | exon | 61578837 | 61579106 | 61578837 | ID=MS.gene98278.t1.exon10;Parent=MS.gene98278.t1 |
| chr3.1 | CDS | 61578837 | 61579106 | 61578837 | ID=cds.MS.gene98278.t1;Parent=MS.gene98278.t1 |
| Gene Sequence |
| Protein sequence |
