Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99468.t1 | XP_013454902.1 | 96.8 | 348 | 11 | 0 | 1 | 348 | 115 | 462 | 5.60E-196 | 693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99468.t1 | Q9M394 | 77.9 | 348 | 76 | 1 | 1 | 348 | 125 | 471 | 4.1e-163 | 575.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99468.t1 | A0A072USU3 | 96.8 | 348 | 11 | 0 | 1 | 348 | 115 | 462 | 4.0e-196 | 693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene99468 | 0.865412 | 6.02E-65 | -1.69E-46 |
| MS.gene050623 | MS.gene99468 | -0.83339 | 5.48E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene99468 | 0.8521 | 5.76E-61 | -1.69E-46 |
| MS.gene051662 | MS.gene99468 | 0.832887 | 7.31E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene99468 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene99468 | 0.829451 | 5.11E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene99468 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene99468 | -0.818652 | 1.75E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene99468 | 0.847551 | 1.08E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene99468 | 0.830905 | 2.26E-55 | -1.69E-46 |
| MS.gene053907 | MS.gene99468 | 0.818014 | 2.45E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene99468 | 0.82582 | 3.80E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene99468 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene99468 | 0.816797 | 4.59E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene99468 | 0.830108 | 3.54E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene99468 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene99468 | 0.838167 | 3.38E-57 | -1.69E-46 |
| MS.gene058182 | MS.gene99468 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene99468 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene99468 | 0.821281 | 4.39E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene99468 | 0.81061 | 1.06E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene99468 | 0.832677 | 8.25E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene99468 | 0.832614 | 8.55E-56 | -1.69E-46 |
| MS.gene059899 | MS.gene99468 | 0.817707 | 2.87E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene99468 | 0.801341 | 9.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99468.t1 | MTR_4g019165 | 96.839 | 348 | 11 | 0 | 1 | 348 | 115 | 462 | 0.0 | 709 |
| MS.gene99468.t1 | MTR_5g044990 | 44.220 | 346 | 173 | 3 | 1 | 343 | 232 | 560 | 1.40e-100 | 308 |
| MS.gene99468.t1 | MTR_2g098950 | 35.913 | 323 | 172 | 5 | 17 | 338 | 38 | 326 | 5.24e-56 | 186 |
| MS.gene99468.t1 | MTR_4g067310 | 35.294 | 323 | 174 | 6 | 17 | 338 | 39 | 327 | 1.24e-52 | 177 |
| MS.gene99468.t1 | MTR_1g076850 | 34.375 | 320 | 177 | 4 | 19 | 338 | 34 | 320 | 1.31e-52 | 177 |
| MS.gene99468.t1 | MTR_5g079460 | 34.891 | 321 | 177 | 4 | 17 | 337 | 91 | 379 | 8.61e-51 | 174 |
| MS.gene99468.t1 | MTR_6g089480 | 32.523 | 329 | 190 | 6 | 17 | 344 | 18 | 315 | 2.58e-47 | 162 |
| MS.gene99468.t1 | MTR_1g101950 | 32.602 | 319 | 184 | 5 | 17 | 335 | 47 | 334 | 7.65e-46 | 159 |
| MS.gene99468.t1 | MTR_7g075860 | 32.288 | 319 | 183 | 4 | 19 | 335 | 67 | 354 | 2.05e-44 | 156 |
| MS.gene99468.t1 | MTR_6g089480 | 32.526 | 289 | 164 | 5 | 17 | 305 | 18 | 275 | 1.78e-42 | 149 |
| MS.gene99468.t1 | MTR_6g089480 | 33.099 | 284 | 159 | 5 | 17 | 300 | 18 | 270 | 1.46e-41 | 146 |
| MS.gene99468.t1 | MTR_1g057810 | 28.526 | 312 | 191 | 4 | 21 | 332 | 276 | 555 | 1.30e-30 | 122 |
| MS.gene99468.t1 | MTR_1g069745 | 27.500 | 320 | 187 | 8 | 17 | 335 | 7 | 282 | 3.83e-30 | 117 |
| MS.gene99468.t1 | MTR_1g069490 | 28.523 | 298 | 182 | 4 | 38 | 335 | 129 | 395 | 8.86e-28 | 112 |
| MS.gene99468.t1 | MTR_1g105150 | 28.254 | 315 | 174 | 7 | 21 | 332 | 276 | 541 | 4.07e-24 | 103 |
| MS.gene99468.t1 | MTR_1g054730 | 27.517 | 149 | 106 | 1 | 46 | 194 | 157 | 303 | 1.01e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99468.t1 | AT3G54090 | 77.874 | 348 | 76 | 1 | 1 | 348 | 125 | 471 | 0.0 | 593 |
| MS.gene99468.t1 | AT1G69200 | 43.030 | 330 | 175 | 3 | 1 | 330 | 228 | 544 | 4.87e-92 | 287 |
| MS.gene99468.t1 | AT3G59480 | 35.692 | 325 | 170 | 4 | 17 | 338 | 34 | 322 | 9.18e-58 | 190 |
| MS.gene99468.t1 | AT2G31390 | 33.529 | 340 | 187 | 4 | 5 | 341 | 21 | 324 | 1.18e-57 | 190 |
| MS.gene99468.t1 | AT1G06020 | 35.276 | 326 | 177 | 5 | 17 | 341 | 34 | 326 | 3.54e-55 | 184 |
| MS.gene99468.t1 | AT1G06030 | 36.308 | 325 | 173 | 6 | 19 | 342 | 37 | 328 | 4.36e-55 | 183 |
| MS.gene99468.t1 | AT1G66430 | 34.783 | 322 | 174 | 6 | 17 | 336 | 89 | 376 | 5.29e-51 | 174 |
| MS.gene99468.t1 | AT4G10260 | 34.688 | 320 | 176 | 4 | 19 | 338 | 32 | 318 | 2.02e-49 | 168 |
| MS.gene99468.t1 | AT5G51830 | 32.919 | 322 | 185 | 5 | 17 | 338 | 47 | 337 | 1.41e-46 | 161 |
| MS.gene99468.t1 | AT5G51830 | 32.919 | 322 | 185 | 5 | 17 | 338 | 47 | 337 | 1.41e-46 | 161 |
Find 108 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTGTTCTTTCAGATTC+TGG | 0.148694 | 4.2:+83306876 | None:intergenic |
| TTCCATTCTGTGTATATATC+TGG | 0.195178 | 4.2:+83309809 | None:intergenic |
| GTTTGGGGAGGAGATGGTTT+TGG | 0.244152 | 4.2:-83309663 | MS.gene99468:CDS |
| GGCGGACGGGCGGCTTTGTT+GGG | 0.245782 | 4.2:-83309704 | MS.gene99468:CDS |
| CGGCTTTGTTGGGGAAAGTT+GGG | 0.250094 | 4.2:-83309694 | MS.gene99468:CDS |
| GTAATACTCTTGACGATTCT+TGG | 0.268512 | 4.2:+83307231 | None:intergenic |
| GTTTGAAGACCAAGATGTTT+TGG | 0.272200 | 4.2:-83306987 | MS.gene99468:CDS |
| CACAAGGCCGCCAAACTTCT+TGG | 0.273975 | 4.2:+83307447 | None:intergenic |
| GGGCGGACGGGCGGCTTTGT+TGG | 0.280211 | 4.2:-83309705 | MS.gene99468:CDS |
| AAAGTTGGGGAAGATGAGTT+TGG | 0.286600 | 4.2:-83309680 | MS.gene99468:CDS |
| TGAAGTTTGATTCGGGGTTT+CGG | 0.299143 | 4.2:-83309607 | MS.gene99468:CDS |
| AACAGAGTTGATTCCATAGA+AGG | 0.303709 | 4.2:+83307487 | None:intergenic |
| CCGGAGTTCGCGCGAGCGCC+AGG | 0.321958 | 4.2:-83309767 | MS.gene99468:CDS |
| AGTTCTAACATCCCCTTCTA+TGG | 0.340037 | 4.2:-83307500 | MS.gene99468:CDS |
| TTTGATTCGGGGTTTCGGAC+TGG | 0.341928 | 4.2:-83309602 | MS.gene99468:CDS |
| TGGACTATTGGTGGAGTTAG+AGG | 0.347631 | 4.2:-83306920 | MS.gene99468:CDS |
| CCATGTCAGGCTGGGCGGAC+GGG | 0.352420 | 4.2:-83309717 | MS.gene99468:CDS |
| CAGATTCTGGGTAGCACTTT+CGG | 0.354595 | 4.2:+83306889 | None:intergenic |
| GCGGCTTTGTTGGGGAAAGT+TGG | 0.356462 | 4.2:-83309695 | MS.gene99468:CDS |
| CTTGGTTTGTTCGTAATCTT+CGG | 0.358233 | 4.2:+83307249 | None:intergenic |
| TTAGAACTTCTGAATTGAAA+TGG | 0.361898 | 4.2:+83307515 | None:intergenic |
| AACTTGTTCTTTCAGATTCT+GGG | 0.363216 | 4.2:+83306877 | None:intergenic |
| AAGTTGGGGAAGATGAGTTT+GGG | 0.364967 | 4.2:-83309679 | MS.gene99468:CDS |
| TTGTTCCATCGGTCACAAAA+AGG | 0.367248 | 4.2:+83307158 | None:intergenic |
| TTGATTCGGGGTTTCGGACT+GGG | 0.367275 | 4.2:-83309601 | MS.gene99468:CDS |
| GGCTGTGGCCCATGTCAGGC+TGG | 0.371287 | 4.2:-83309726 | MS.gene99468:CDS |
| CCAGTTCTATCGCAAGTATA+AGG | 0.379857 | 4.2:+83307067 | None:intergenic |
| AGAGGGGTGAAGTTTGATTC+GGG | 0.383749 | 4.2:-83309614 | MS.gene99468:CDS |
| CGTAATGTTCTTCGTCTAGA+AGG | 0.383934 | 4.2:+83307305 | None:intergenic |
| ATTATATCGCAATGGACTAT+TGG | 0.392117 | 4.2:-83306932 | MS.gene99468:CDS |
| CCGAGGAAATCTCGCCTTTG+TGG | 0.396249 | 4.2:-83307198 | MS.gene99468:CDS |
| CCCGTCCGCCCAGCCTGACA+TGG | 0.396291 | 4.2:+83309717 | None:intergenic |
| CCCATGTCAGGCTGGGCGGA+CGG | 0.411915 | 4.2:-83309718 | MS.gene99468:CDS |
| GCGGACGGGCGGCTTTGTTG+GGG | 0.418794 | 4.2:-83309703 | MS.gene99468:CDS |
| AGATGAGTTTGGGGAGGAGA+TGG | 0.422134 | 4.2:-83309669 | MS.gene99468:CDS |
| ATAAAGTGGTCCAAGAAGTT+TGG | 0.422946 | 4.2:-83307457 | MS.gene99468:CDS |
| AGTCCATTGCGATATAATTC+CGG | 0.424032 | 4.2:+83306937 | None:intergenic |
| TAGAGGGGTGAAGTTTGATT+CGG | 0.426457 | 4.2:-83309615 | MS.gene99468:CDS |
| GGCTTTGTTGGGGAAAGTTG+GGG | 0.436289 | 4.2:-83309693 | MS.gene99468:CDS |
| ATGTGGCTGTGGCCCATGTC+AGG | 0.444864 | 4.2:-83309730 | MS.gene99468:CDS |
| GAGTTCGCGCGAGCGCCAGG+TGG | 0.447733 | 4.2:-83309764 | MS.gene99468:CDS |
| ACATTTGACGGTGGCCCACC+TGG | 0.457992 | 4.2:+83309749 | None:intergenic |
| CGTGATCTCCACAGAGGTAA+TGG | 0.461462 | 4.2:+83307406 | None:intergenic |
| TGTGTATATATCTGGGTCCA+TGG | 0.465474 | 4.2:+83309817 | None:intergenic |
| TCCATTCTGTGTATATATCT+GGG | 0.467221 | 4.2:+83309810 | None:intergenic |
| CCTTATACTTGCGATAGAAC+TGG | 0.478733 | 4.2:-83307067 | MS.gene99468:CDS |
| GATGGGGATGGAGATTGTTA+AGG | 0.478978 | 4.2:-83309540 | MS.gene99468:CDS |
| TGGCTCTGGTGATGCTATTG+TGG | 0.484324 | 4.2:-83307047 | MS.gene99468:CDS |
| CCTGGCGCTCGCGCGAACTC+CGG | 0.484739 | 4.2:+83309767 | None:intergenic |
| ACCACAACCCCGTCAAAAGA+AGG | 0.492807 | 4.2:+83307115 | None:intergenic |
| TGGGCCACAGCCACATTTGA+CGG | 0.493828 | 4.2:+83309737 | None:intergenic |
| TTTGATGATGATGGGAAGAT+GGG | 0.499638 | 4.2:-83309557 | MS.gene99468:CDS |
| ATCTCGCCTTTGTGGCATGA+TGG | 0.501857 | 4.2:-83307190 | MS.gene99468:CDS |
| GTTTGATGATGATGGGAAGA+TGG | 0.503712 | 4.2:-83309558 | MS.gene99468:CDS |
| CTACGTTTCGCTATTGCAGC+CGG | 0.509386 | 4.2:-83306956 | MS.gene99468:CDS |
| GCTGTGGCCCATGTCAGGCT+GGG | 0.510341 | 4.2:-83309725 | MS.gene99468:CDS |
| AGGAGAAGGTGCAGACTAGA+GGG | 0.514816 | 4.2:-83309631 | MS.gene99468:CDS |
| AGATTTCCTCGGCAGTGTAA+TGG | 0.518791 | 4.2:+83307209 | None:intergenic |
| TGAAGTTTCAAGAACCGAGC+TGG | 0.526021 | 4.2:-83307332 | MS.gene99468:CDS |
| AGTGTGCTGAGGATTCTCTT+AGG | 0.527352 | 4.2:-83309517 | MS.gene99468:CDS |
| CTCTGTTCAAAGCAATAAAG+TGG | 0.530790 | 4.2:-83307471 | MS.gene99468:CDS |
| TAATCTTCGGCATAGTATTG+TGG | 0.532869 | 4.2:+83307262 | None:intergenic |
| GGCGCTCGCGCGAACTCCGG+CGG | 0.534032 | 4.2:+83309770 | None:intergenic |
| GTGAATTCTAATTGTTCCAT+CGG | 0.536542 | 4.2:+83307147 | None:intergenic |
| GCTGTCTCTCCAAAACATCT+TGG | 0.538601 | 4.2:+83306978 | None:intergenic |
| TTCAAACATTTCTCGACAAG+TGG | 0.547137 | 4.2:+83307003 | None:intergenic |
| GCCACCGTCAAATGTGGCTG+TGG | 0.551548 | 4.2:-83309741 | MS.gene99468:CDS |
| CCACAACCCCGTCAAAAGAA+GGG | 0.552175 | 4.2:+83307116 | None:intergenic |
| ACCCAGATATATACACAGAA+TGG | 0.556834 | 4.2:-83309811 | MS.gene99468:CDS |
| CCGTCCGCCCAGCCTGACAT+GGG | 0.557236 | 4.2:+83309718 | None:intergenic |
| AAGGTGAAGTTTGATGATGA+TGG | 0.557714 | 4.2:-83309566 | MS.gene99468:CDS |
| ACAGAGTTGATTCCATAGAA+GGG | 0.559311 | 4.2:+83307488 | None:intergenic |
| GACTGGGTGTAGTTATATGA+AGG | 0.559654 | 4.2:-83309585 | MS.gene99468:CDS |
| AGGTGGGCCACCGTCAAATG+TGG | 0.559872 | 4.2:-83309747 | MS.gene99468:CDS |
| ATATCGCAATGGACTATTGG+TGG | 0.560224 | 4.2:-83306929 | MS.gene99468:CDS |
| TGTCAGGCTGGGCGGACGGG+CGG | 0.563178 | 4.2:-83309714 | MS.gene99468:CDS |
| GTCTAGAAGGAATTCCAGCT+CGG | 0.563796 | 4.2:+83307318 | None:intergenic |
| AGTTCGCGCGAGCGCCAGGT+GGG | 0.566606 | 4.2:-83309763 | MS.gene99468:CDS |
| AAGTGGTCCAAGAAGTTTGG+CGG | 0.570685 | 4.2:-83307454 | MS.gene99468:CDS |
| GTGTATATATCTGGGTCCAT+GGG | 0.573279 | 4.2:+83309818 | None:intergenic |
| TGATGATGGGAAGATGGGGA+TGG | 0.574654 | 4.2:-83309552 | MS.gene99468:CDS |
| AGGTGAAGTTTGATGATGAT+GGG | 0.578660 | 4.2:-83309565 | MS.gene99468:CDS |
| ACTTGCGATAGAACTGGCTC+TGG | 0.580431 | 4.2:-83307061 | MS.gene99468:CDS |
| TGGGGAAGATGAGTTTGGGG+AGG | 0.581376 | 4.2:-83309675 | MS.gene99468:CDS |
| AAGGAGAAGGTGCAGACTAG+AGG | 0.583488 | 4.2:-83309632 | MS.gene99468:CDS |
| CCACAAAGGCGAGATTTCCT+CGG | 0.586298 | 4.2:+83307198 | None:intergenic |
| AATATTTATCACCACATGGA+AGG | 0.592799 | 4.2:+83306848 | None:intergenic |
| TTTGGGGATGAATAAGGAGA+AGG | 0.593535 | 4.2:-83309645 | MS.gene99468:CDS |
| GAGGGGTGAAGTTTGATTCG+GGG | 0.600416 | 4.2:-83309613 | MS.gene99468:CDS |
| CAGAGTTGATTCCATAGAAG+GGG | 0.614146 | 4.2:+83307489 | None:intergenic |
| GATGTTACAATGGAAGCCGC+CGG | 0.615125 | 4.2:-83309786 | MS.gene99468:CDS |
| CACAACCCCGTCAAAAGAAG+GGG | 0.616084 | 4.2:+83307117 | None:intergenic |
| GTGGCCCATGTCAGGCTGGG+CGG | 0.624307 | 4.2:-83309722 | MS.gene99468:CDS |
| CAGCCGGAATTATATCGCAA+TGG | 0.626399 | 4.2:-83306940 | MS.gene99468:CDS |
| CAGAATGGAAGATGTTACAA+TGG | 0.641345 | 4.2:-83309796 | MS.gene99468:CDS |
| TTCTGGGTAGCACTTTCGGT+AGG | 0.651066 | 4.2:+83306893 | None:intergenic |
| GTATTACCATTACACTGCCG+AGG | 0.655331 | 4.2:-83307215 | MS.gene99468:CDS |
| AGTTGGGGAAGATGAGTTTG+GGG | 0.660506 | 4.2:-83309678 | MS.gene99468:CDS |
| GATTGTTAAGGAGTGTGCTG+AGG | 0.671018 | 4.2:-83309528 | MS.gene99468:CDS |
| TTGATGATGATGGGAAGATG+GGG | 0.672300 | 4.2:-83309556 | MS.gene99468:CDS |
| GGAGAAGGTGCAGACTAGAG+GGG | 0.677795 | 4.2:-83309630 | MS.gene99468:CDS |
| TTAAGTCCATCATGCCACAA+AGG | 0.677817 | 4.2:+83307184 | None:intergenic |
| TAAACTTGCCATTACCTCTG+TGG | 0.687258 | 4.2:-83307414 | MS.gene99468:CDS |
| AAACAATATTTATCACCACA+TGG | 0.690885 | 4.2:+83306844 | None:intergenic |
| GCCACAGCCACATTTGACGG+TGG | 0.691352 | 4.2:+83309740 | None:intergenic |
| AAGTTTATGTACCTTCCATG+TGG | 0.693025 | 4.2:-83306859 | MS.gene99468:CDS |
| TAGACGAAGAACATTACGAG+AGG | 0.701140 | 4.2:-83307300 | MS.gene99468:CDS |
| TCATCGCGTGATCTCCACAG+AGG | 0.761083 | 4.2:+83307400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAGTTTTTTTTCTTTA+CGG | - | chr4.2:83309039-83309058 | MS.gene99468:intron | 10.0% |
| !! | AAAAAATAAACAACTATAAG+TGG | + | chr4.2:83307261-83307280 | None:intergenic | 15.0% |
| !! | ATAAGCTTATATATCATATA+AGG | + | chr4.2:83307877-83307896 | None:intergenic | 15.0% |
| !! | TTATTATTCATAATGAGATT+CGG | - | chr4.2:83307962-83307981 | MS.gene99468:intron | 15.0% |
| !!! | TCTCATTTGATTTAATTTTT+AGG | - | chr4.2:83307850-83307869 | MS.gene99468:intron | 15.0% |
| !! | CTTATACCATCATAAAATTT+AGG | + | chr4.2:83307406-83307425 | None:intergenic | 20.0% |
| !! | GAGAAATAATAAAAAAAGCA+TGG | - | chr4.2:83309299-83309318 | MS.gene99468:intron | 20.0% |
| !!! | AGTGTCAATAAAATCAATTT+TGG | + | chr4.2:83308952-83308971 | None:intergenic | 20.0% |
| !!! | GTGTCAATAAAATCAATTTT+GGG | + | chr4.2:83308951-83308970 | None:intergenic | 20.0% |
| !!! | TAATCAAAACTTTTTCTGTT+AGG | - | chr4.2:83308327-83308346 | MS.gene99468:intron | 20.0% |
| !!! | TGAAAAAATAGCTTTAACAT+TGG | + | chr4.2:83308612-83308631 | None:intergenic | 20.0% |
| !!! | TTAGGCTTTACAATATTTTA+CGG | - | chr4.2:83307604-83307623 | MS.gene99468:intron | 20.0% |
| !!! | TTTCAATGTTTTTACTTTGA+AGG | - | chr4.2:83308551-83308570 | MS.gene99468:intron | 20.0% |
| ! | ATTCTGAATACATTACATTG+TGG | - | chr4.2:83308733-83308752 | MS.gene99468:intron | 25.0% |
| ! | CGTAAAATGTGTTTATAAGT+GGG | - | chr4.2:83307541-83307560 | MS.gene99468:intron | 25.0% |
| ! | TACCATCATAAAATTTAGGT+TGG | + | chr4.2:83307402-83307421 | None:intergenic | 25.0% |
| ! | TATACTGACATTGGTAAAAA+TGG | - | chr4.2:83308357-83308376 | MS.gene99468:intron | 25.0% |
| ! | TCAGTTAAAATTGTGTTTGA+AGG | - | chr4.2:83308519-83308538 | MS.gene99468:intron | 25.0% |
| ! | TCGTAAAATGTGTTTATAAG+TGG | - | chr4.2:83307540-83307559 | MS.gene99468:intron | 25.0% |
| ! | TTAGAACTTCTGAATTGAAA+TGG | + | chr4.2:83309159-83309178 | None:intergenic | 25.0% |
| !! | AATAATAAAAAAAGCATGGC+AGG | - | chr4.2:83309303-83309322 | MS.gene99468:intron | 25.0% |
| !! | TGATATTTTATGACGTCAAA+TGG | - | chr4.2:83308784-83308803 | MS.gene99468:intron | 25.0% |
| !!! | AAAATAGCTTTAACATTGGA+TGG | + | chr4.2:83308608-83308627 | None:intergenic | 25.0% |
| !!! | CAATAAAATCAATTTTGGGA+TGG | + | chr4.2:83308947-83308966 | None:intergenic | 25.0% |
| !!! | GTGAAAGTTTGTTAATGTAA+GGG | - | chr4.2:83308408-83308427 | MS.gene99468:intron | 25.0% |
| !!! | TACTAGTTTGTTAATGTATG+AGG | - | chr4.2:83309062-83309081 | MS.gene99468:intron | 25.0% |
| !!! | TAGTGTATCTATTTTTGACA+CGG | - | chr4.2:83307684-83307703 | MS.gene99468:intron | 25.0% |
| AAAGATCATGTATTCACTTG+AGG | - | chr4.2:83308702-83308721 | MS.gene99468:intron | 30.0% | |
| AGCAGTTCATTAGAATGAAA+CGG | + | chr4.2:83307765-83307784 | None:intergenic | 30.0% | |
| CAGTTAAAGTCAAGTTTGAA+GGG | - | chr4.2:83308159-83308178 | MS.gene99468:intron | 30.0% | |
| CGGTTAATGAATTGGAAAAT+TGG | - | chr4.2:83307982-83308001 | MS.gene99468:intron | 30.0% | |
| CTTTGCAGAATACTAATGTT+TGG | + | chr4.2:83308686-83308705 | None:intergenic | 30.0% | |
| GAAGCAAATTTATGTGTGAA+AGG | - | chr4.2:83308304-83308323 | MS.gene99468:intron | 30.0% | |
| GTGAATTCTAATTGTTCCAT+CGG | + | chr4.2:83309527-83309546 | None:intergenic | 30.0% | |
| TCAAACATTCTCCTTAACAA+AGG | + | chr4.2:83308447-83308466 | None:intergenic | 30.0% | |
| TCAGTTAAAGTCAAGTTTGA+AGG | - | chr4.2:83308158-83308177 | MS.gene99468:intron | 30.0% | |
| TCCATTCTGTGTATATATCT+GGG | + | chr4.2:83306864-83306883 | None:intergenic | 30.0% | |
| TTCCATTCTGTGTATATATC+TGG | + | chr4.2:83306865-83306884 | None:intergenic | 30.0% | |
| TTGTTAATGTAAGGGTAAGA+TGG | - | chr4.2:83308416-83308435 | MS.gene99468:intron | 30.0% | |
| TTGTTAATGTATGAGGAAGA+TGG | - | chr4.2:83308066-83308085 | MS.gene99468:intron | 30.0% | |
| ! | AAACTTGTTCTTTCAGATTC+TGG | + | chr4.2:83309798-83309817 | None:intergenic | 30.0% |
| ! | AACTTGTTCTTTCAGATTCT+GGG | + | chr4.2:83309797-83309816 | None:intergenic | 30.0% |
| ! | AGATGGTTTTTCCTTTGTTA+AGG | - | chr4.2:83308433-83308452 | MS.gene99468:intron | 30.0% |
| ! | ATATGGTTTGCAAGATAAGT+TGG | - | chr4.2:83308828-83308847 | MS.gene99468:intron | 30.0% |
| ! | ATGAGATTCGGTTAATGAAT+TGG | - | chr4.2:83307974-83307993 | MS.gene99468:intron | 30.0% |
| ! | GTCCAACCTAAATTTTATGA+TGG | - | chr4.2:83307397-83307416 | MS.gene99468:CDS | 30.0% |
| ! | TATTATACCCCTTCTTTTGA+CGG | - | chr4.2:83309547-83309566 | MS.gene99468:CDS | 30.0% |
| ! | TCATGCTTTGTTAATGTATG+AGG | - | chr4.2:83308059-83308078 | MS.gene99468:intron | 30.0% |
| !! | ATTATATCGCAATGGACTAT+TGG | - | chr4.2:83309739-83309758 | MS.gene99468:CDS | 30.0% |
| !! | GGTGAAAGTTTGTTAATGTA+AGG | - | chr4.2:83308407-83308426 | MS.gene99468:intron | 30.0% |
| !!! | GAATCTTTCTGTTTTGAAAG+AGG | - | chr4.2:83307188-83307207 | MS.gene99468:CDS | 30.0% |
| !!! | GTCGTAAAATTGGTTTTGTA+GGG | - | chr4.2:83307365-83307384 | MS.gene99468:CDS | 30.0% |
| !!! | TATTGACACTTTTGAAACCA+AGG | - | chr4.2:83308962-83308981 | MS.gene99468:intron | 30.0% |
| AAGTCACACATGTAGAGTTT+GGG | - | chr4.2:83308886-83308905 | MS.gene99468:intron | 35.0% | |
| AAGTTTATGTACCTTCCATG+TGG | - | chr4.2:83309812-83309831 | MS.gene99468:CDS | 35.0% | |
| AATTCCTCTGAACCTCAAAT+TGG | + | chr4.2:83308645-83308664 | None:intergenic | 35.0% | |
| ACCCAGATATATACACAGAA+TGG | - | chr4.2:83306860-83306879 | MS.gene99468:CDS | 35.0% | |
| AGTCCATTGCGATATAATTC+CGG | + | chr4.2:83309737-83309756 | None:intergenic | 35.0% | |
| AGTTTACGTCGAAAAACACA+AGG | + | chr4.2:83309243-83309262 | None:intergenic | 35.0% | |
| ATAAAGTGGTCCAAGAAGTT+TGG | - | chr4.2:83309214-83309233 | MS.gene99468:intron | 35.0% | |
| CAACACTTCTAGTCAAATTG+AGG | - | chr4.2:83308270-83308289 | MS.gene99468:intron | 35.0% | |
| CAGAATGGAAGATGTTACAA+TGG | - | chr4.2:83306875-83306894 | MS.gene99468:CDS | 35.0% | |
| CTCTGTTCAAAGCAATAAAG+TGG | - | chr4.2:83309200-83309219 | MS.gene99468:intron | 35.0% | |
| GCAGTTCATTAGAATGAAAC+GGG | + | chr4.2:83307764-83307783 | None:intergenic | 35.0% | |
| GTAATACTCTTGACGATTCT+TGG | + | chr4.2:83309443-83309462 | None:intergenic | 35.0% | |
| TAAGTCACACATGTAGAGTT+TGG | - | chr4.2:83308885-83308904 | MS.gene99468:intron | 35.0% | |
| TAATCTTCGGCATAGTATTG+TGG | + | chr4.2:83309412-83309431 | None:intergenic | 35.0% | |
| TCAAACATTCTCCCTAACAA+AGG | + | chr4.2:83308097-83308116 | None:intergenic | 35.0% | |
| TGTGATTCACAATTCGTATC+TGG | - | chr4.2:83308008-83308027 | MS.gene99468:intron | 35.0% | |
| TGTTAGTGCTATACTGACAT+TGG | - | chr4.2:83308377-83308396 | MS.gene99468:intron | 35.0% | |
| TTAGTTGAGCTATCAGCTAT+TGG | - | chr4.2:83307439-83307458 | MS.gene99468:CDS | 35.0% | |
| TTCAAACATTTCTCGACAAG+TGG | + | chr4.2:83309671-83309690 | None:intergenic | 35.0% | |
| ! | AACAGAGTTGATTCCATAGA+AGG | + | chr4.2:83309187-83309206 | None:intergenic | 35.0% |
| ! | ACAAAACCAATTTTACGACG+AGG | + | chr4.2:83307364-83307383 | None:intergenic | 35.0% |
| ! | ACAGAGTTGATTCCATAGAA+GGG | + | chr4.2:83309186-83309205 | None:intergenic | 35.0% |
| ! | ATTATACCCCTTCTTTTGAC+GGG | - | chr4.2:83309548-83309567 | MS.gene99468:CDS | 35.0% |
| ! | CAAAACCAATTTTACGACGA+GGG | + | chr4.2:83307363-83307382 | None:intergenic | 35.0% |
| ! | GACGTCAAATGGTTTTTGTA+TGG | - | chr4.2:83308795-83308814 | MS.gene99468:intron | 35.0% |
| ! | GAGGAATTTTTGTGTGTGAA+AGG | - | chr4.2:83308657-83308676 | MS.gene99468:intron | 35.0% |
| ! | GTTTGAAGACCAAGATGTTT+TGG | - | chr4.2:83309684-83309703 | MS.gene99468:CDS | 35.0% |
| ! | TGTATGGATTGTGACTGATA+TGG | - | chr4.2:83308811-83308830 | MS.gene99468:intron | 35.0% |
| !! | AAGGTGAAGTTTGATGATGA+TGG | - | chr4.2:83307105-83307124 | MS.gene99468:CDS | 35.0% |
| !! | AGGTGAAGTTTGATGATGAT+GGG | - | chr4.2:83307106-83307125 | MS.gene99468:CDS | 35.0% |
| !! | CTTGGTTTGTTCGTAATCTT+CGG | + | chr4.2:83309425-83309444 | None:intergenic | 35.0% |
| !! | TTTGATGATGATGGGAAGAT+GGG | - | chr4.2:83307114-83307133 | MS.gene99468:CDS | 35.0% |
| !!! | CATTTTGGGGTCAAAATAGT+TGG | - | chr4.2:83308991-83309010 | MS.gene99468:intron | 35.0% |
| !!! | CGTCGTAAAATTGGTTTTGT+AGG | - | chr4.2:83307364-83307383 | MS.gene99468:CDS | 35.0% |
| !!! | TGGTTTTGTAGGGTTAAGTT+AGG | - | chr4.2:83307375-83307394 | MS.gene99468:CDS | 35.0% |
| !!! | TTTTTTATGTGTACCACTGC+AGG | - | chr4.2:83309123-83309142 | MS.gene99468:intron | 35.0% |
| AAAGTTGGGGAAGATGAGTT+TGG | - | chr4.2:83306991-83307010 | MS.gene99468:CDS | 40.0% | |
| AACCCTATCACAACCAAGAA+AGG | + | chr4.2:83307489-83307508 | None:intergenic | 40.0% | |
| AAGATGGTTGTGCCTTTGTT+AGG | - | chr4.2:83308082-83308101 | MS.gene99468:intron | 40.0% | |
| AAGTTGGGGAAGATGAGTTT+GGG | - | chr4.2:83306992-83307011 | MS.gene99468:CDS | 40.0% | |
| ACTGCTACTCAAACTTAGTG+TGG | - | chr4.2:83307779-83307798 | MS.gene99468:intron | 40.0% | |
| AGATGGTTGTGCCTTTGTTA+GGG | - | chr4.2:83308083-83308102 | MS.gene99468:intron | 40.0% | |
| ATTCTGAACACAGTCGATAC+AGG | - | chr4.2:83307655-83307674 | MS.gene99468:intron | 40.0% | |
| CATCACTTCAAGCCAATTTG+AGG | - | chr4.2:83308630-83308649 | MS.gene99468:intron | 40.0% | |
| CCAGTTCTATCGCAAGTATA+AGG | + | chr4.2:83309607-83309626 | None:intergenic | 40.0% | |
| CCTTATACTTGCGATAGAAC+TGG | - | chr4.2:83309604-83309623 | MS.gene99468:CDS | 40.0% | |
| CGTAATGTTCTTCGTCTAGA+AGG | + | chr4.2:83309369-83309388 | None:intergenic | 40.0% | |
| CTACCAACTCTGCTTGTAAA+GGG | + | chr4.2:83307577-83307596 | None:intergenic | 40.0% | |
| GACTGGGTGTAGTTATATGA+AGG | - | chr4.2:83307086-83307105 | MS.gene99468:CDS | 40.0% | |
| GCTGATAGCTCAACTAATCA+TGG | + | chr4.2:83307436-83307455 | None:intergenic | 40.0% | |
| GGTTAGTGCTATACTGACAT+TGG | - | chr4.2:83308348-83308367 | MS.gene99468:intron | 40.0% | |
| TAAACTTGCCATTACCTCTG+TGG | - | chr4.2:83309257-83309276 | MS.gene99468:intron | 40.0% | |
| TAGACGAAGAACATTACGAG+AGG | - | chr4.2:83309371-83309390 | MS.gene99468:intron | 40.0% | |
| TAGAGGGGTGAAGTTTGATT+CGG | - | chr4.2:83307056-83307075 | MS.gene99468:CDS | 40.0% | |
| TTAAGTCCATCATGCCACAA+AGG | + | chr4.2:83309490-83309509 | None:intergenic | 40.0% | |
| TTGTTCCATCGGTCACAAAA+AGG | + | chr4.2:83309516-83309535 | None:intergenic | 40.0% | |
| TTTGGGGATGAATAAGGAGA+AGG | - | chr4.2:83307026-83307045 | MS.gene99468:CDS | 40.0% | |
| ! | AAACCAAGGTCACTGCATTT+TGG | - | chr4.2:83308976-83308995 | MS.gene99468:intron | 40.0% |
| ! | AACCAAGGTCACTGCATTTT+GGG | - | chr4.2:83308977-83308996 | MS.gene99468:intron | 40.0% |
| ! | AAGTTCCTTTTTGTGACCGA+TGG | - | chr4.2:83309508-83309527 | MS.gene99468:CDS | 40.0% |
| ! | AGTTCTAACATCCCCTTCTA+TGG | - | chr4.2:83309171-83309190 | MS.gene99468:intron | 40.0% |
| ! | CAGAGTTGATTCCATAGAAG+GGG | + | chr4.2:83309185-83309204 | None:intergenic | 40.0% |
| ! | TTATACCCCTTCTTTTGACG+GGG | - | chr4.2:83309549-83309568 | MS.gene99468:CDS | 40.0% |
| !! | ATATCGCAATGGACTATTGG+TGG | - | chr4.2:83309742-83309761 | MS.gene99468:CDS | 40.0% |
| !! | CTTTACAAGCAGAGTTGGTA+GGG | - | chr4.2:83307576-83307595 | MS.gene99468:intron | 40.0% |
| !! | GTTTGATGATGATGGGAAGA+TGG | - | chr4.2:83307113-83307132 | MS.gene99468:CDS | 40.0% |
| !! | TGAAGTTTGATTCGGGGTTT+CGG | - | chr4.2:83307064-83307083 | MS.gene99468:CDS | 40.0% |
| !! | TTGATGATGATGGGAAGATG+GGG | - | chr4.2:83307115-83307134 | MS.gene99468:CDS | 40.0% |
| !!! | GATGGTTTTGGGGATGAATA+AGG | - | chr4.2:83307020-83307039 | MS.gene99468:CDS | 40.0% |
| AAGTGGTCCAAGAAGTTTGG+CGG | - | chr4.2:83309217-83309236 | MS.gene99468:intron | 45.0% | |
| AGAGGGGTGAAGTTTGATTC+GGG | - | chr4.2:83307057-83307076 | MS.gene99468:CDS | 45.0% | |
| AGATTTCCTCGGCAGTGTAA+TGG | + | chr4.2:83309465-83309484 | None:intergenic | 45.0% | |
| AGTGTGCTGAGGATTCTCTT+AGG | - | chr4.2:83307154-83307173 | MS.gene99468:CDS | 45.0% | |
| AGTTGGGGAAGATGAGTTTG+GGG | - | chr4.2:83306993-83307012 | MS.gene99468:CDS | 45.0% | |
| CAACTCTGCTTGTAAAGGGA+GGG | + | chr4.2:83307573-83307592 | None:intergenic | 45.0% | |
| CAGATTCTGGGTAGCACTTT+CGG | + | chr4.2:83309785-83309804 | None:intergenic | 45.0% | |
| CAGCCGGAATTATATCGCAA+TGG | - | chr4.2:83309731-83309750 | MS.gene99468:CDS | 45.0% | |
| CCTACCAACTCTGCTTGTAA+AGG | + | chr4.2:83307578-83307597 | None:intergenic | 45.0% | |
| CTATCAGCTATTGGTCACTC+GGG | - | chr4.2:83307448-83307467 | MS.gene99468:CDS | 45.0% | |
| GATGGGGATGGAGATTGTTA+AGG | - | chr4.2:83307131-83307150 | MS.gene99468:CDS | 45.0% | |
| GCTATCAGCTATTGGTCACT+CGG | - | chr4.2:83307447-83307466 | MS.gene99468:CDS | 45.0% | |
| GCTGTCTCTCCAAAACATCT+TGG | + | chr4.2:83309696-83309715 | None:intergenic | 45.0% | |
| GGCCTTTCTTGGTTGTGATA+GGG | - | chr4.2:83307484-83307503 | MS.gene99468:CDS | 45.0% | |
| GTATTACCATTACACTGCCG+AGG | - | chr4.2:83309456-83309475 | MS.gene99468:intron | 45.0% | |
| GTCTAGAAGGAATTCCAGCT+CGG | + | chr4.2:83309356-83309375 | None:intergenic | 45.0% | |
| TGAAGTTTCAAGAACCGAGC+TGG | - | chr4.2:83309339-83309358 | MS.gene99468:intron | 45.0% | |
| TGCATCCCTCGTCGTAAAAT+TGG | - | chr4.2:83307355-83307374 | MS.gene99468:CDS | 45.0% | |
| TGGACTATTGGTGGAGTTAG+AGG | - | chr4.2:83309751-83309770 | MS.gene99468:CDS | 45.0% | |
| TGGCCTTTCTTGGTTGTGAT+AGG | - | chr4.2:83307483-83307502 | MS.gene99468:CDS | 45.0% | |
| ! | ACCAAGGTCACTGCATTTTG+GGG | - | chr4.2:83308978-83308997 | MS.gene99468:intron | 45.0% |
| ! | CAAGCCAATTTGAGGTTCAG+AGG | - | chr4.2:83308638-83308657 | MS.gene99468:intron | 45.0% |
| ! | CCTTTACAAGCAGAGTTGGT+AGG | - | chr4.2:83307575-83307594 | MS.gene99468:intron | 45.0% |
| ! | GATTGTTAAGGAGTGTGCTG+AGG | - | chr4.2:83307143-83307162 | MS.gene99468:CDS | 45.0% |
| ! | TTTGGGGAGGAGATGGTTTT+GGG | - | chr4.2:83307009-83307028 | MS.gene99468:CDS | 45.0% |
| ! | TTTTACGACGAGGGATGCAT+CGG | + | chr4.2:83307354-83307373 | None:intergenic | 45.0% |
| !! | AGAGTTGGTAGGGTTGAGTT+AGG | - | chr4.2:83307586-83307605 | MS.gene99468:intron | 45.0% |
| ACCACAACCCCGTCAAAAGA+AGG | + | chr4.2:83309559-83309578 | None:intergenic | 50.0% | |
| ACCCCAAAATGCAGTGACCT+TGG | + | chr4.2:83308982-83309001 | None:intergenic | 50.0% | |
| AGATGAGTTTGGGGAGGAGA+TGG | - | chr4.2:83307002-83307021 | MS.gene99468:CDS | 50.0% | |
| ATCTCGCCTTTGTGGCATGA+TGG | - | chr4.2:83309481-83309500 | MS.gene99468:intron | 50.0% | |
| CACAACCAAGAAAGGCCATC+TGG | + | chr4.2:83307481-83307500 | None:intergenic | 50.0% | |
| CACAACCCCGTCAAAAGAAG+GGG | + | chr4.2:83309557-83309576 | None:intergenic | 50.0% | |
| CCAACTCTGCTTGTAAAGGG+AGG | + | chr4.2:83307574-83307593 | None:intergenic | 50.0% | |
| CCACAAAGGCGAGATTTCCT+CGG | + | chr4.2:83309476-83309495 | None:intergenic | 50.0% | |
| CCACAACCCCGTCAAAAGAA+GGG | + | chr4.2:83309558-83309577 | None:intergenic | 50.0% | |
| CCTCCCTTTACAAGCAGAGT+TGG | - | chr4.2:83307571-83307590 | MS.gene99468:intron | 50.0% | |
| CGTGATCTCCACAGAGGTAA+TGG | + | chr4.2:83309268-83309287 | None:intergenic | 50.0% | |
| CTACGTTTCGCTATTGCAGC+CGG | - | chr4.2:83309715-83309734 | MS.gene99468:CDS | 50.0% | |
| GATGTTACAATGGAAGCCGC+CGG | - | chr4.2:83306885-83306904 | MS.gene99468:CDS | 50.0% | |
| TATGTGTACCACTGCAGGCT+AGG | - | chr4.2:83309128-83309147 | MS.gene99468:intron | 50.0% | |
| TGGAAAATCCTAGCCTGCAG+TGG | + | chr4.2:83309139-83309158 | None:intergenic | 50.0% | |
| TTCTGGGTAGCACTTTCGGT+AGG | + | chr4.2:83309781-83309800 | None:intergenic | 50.0% | |
| ! | AAGGAGAAGGTGCAGACTAG+AGG | - | chr4.2:83307039-83307058 | MS.gene99468:CDS | 50.0% |
| ! | ACTTGCGATAGAACTGGCTC+TGG | - | chr4.2:83309610-83309629 | MS.gene99468:CDS | 50.0% |
| ! | AGGAGAAGGTGCAGACTAGA+GGG | - | chr4.2:83307040-83307059 | MS.gene99468:CDS | 50.0% |
| ! | GAGGGGTGAAGTTTGATTCG+GGG | - | chr4.2:83307058-83307077 | MS.gene99468:CDS | 50.0% |
| ! | GTTTGGGGAGGAGATGGTTT+TGG | - | chr4.2:83307008-83307027 | MS.gene99468:CDS | 50.0% |
| ! | TCTTTTGACGGGGTTGTGGT+TGG | - | chr4.2:83309559-83309578 | MS.gene99468:CDS | 50.0% |
| !! | CGGCTTTGTTGGGGAAAGTT+GGG | - | chr4.2:83306977-83306996 | MS.gene99468:CDS | 50.0% |
| !! | GGCTTTGTTGGGGAAAGTTG+GGG | - | chr4.2:83306978-83306997 | MS.gene99468:CDS | 50.0% |
| !! | TGATGATGGGAAGATGGGGA+TGG | - | chr4.2:83307119-83307138 | MS.gene99468:CDS | 50.0% |
| !! | TGGCTCTGGTGATGCTATTG+TGG | - | chr4.2:83309624-83309643 | MS.gene99468:CDS | 50.0% |
| !! | TTGATTCGGGGTTTCGGACT+GGG | - | chr4.2:83307070-83307089 | MS.gene99468:CDS | 50.0% |
| !! | TTGGGGAGGAGATGGTTTTG+GGG | - | chr4.2:83307010-83307029 | MS.gene99468:CDS | 50.0% |
| !! | TTTGATTCGGGGTTTCGGAC+TGG | - | chr4.2:83307069-83307088 | MS.gene99468:CDS | 50.0% |
| ACGCTCCAGATGGCCTTTCT+TGG | - | chr4.2:83307473-83307492 | MS.gene99468:CDS | 55.0% | |
| CACAAGGCCGCCAAACTTCT+TGG | + | chr4.2:83309227-83309246 | None:intergenic | 55.0% | |
| CCGAGGAAATCTCGCCTTTG+TGG | - | chr4.2:83309473-83309492 | MS.gene99468:intron | 55.0% | |
| CTCTGCTTGTAAAGGGAGGG+AGG | + | chr4.2:83307570-83307589 | None:intergenic | 55.0% | |
| TCATCGCGTGATCTCCACAG+AGG | + | chr4.2:83309274-83309293 | None:intergenic | 55.0% | |
| TGGGCCACAGCCACATTTGA+CGG | + | chr4.2:83306937-83306956 | None:intergenic | 55.0% | |
| TGGGGAAGATGAGTTTGGGG+AGG | - | chr4.2:83306996-83307015 | MS.gene99468:CDS | 55.0% | |
| ! | CCCTTCTTTTGACGGGGTTG+TGG | - | chr4.2:83309555-83309574 | MS.gene99468:CDS | 55.0% |
| ! | GGAGAAGGTGCAGACTAGAG+GGG | - | chr4.2:83307041-83307060 | MS.gene99468:CDS | 55.0% |
| !! | GCGGCTTTGTTGGGGAAAGT+TGG | - | chr4.2:83306976-83306995 | MS.gene99468:CDS | 55.0% |
| ACATTTGACGGTGGCCCACC+TGG | + | chr4.2:83306925-83306944 | None:intergenic | 60.0% | |
| AGGTGGGCCACCGTCAAATG+TGG | - | chr4.2:83306924-83306943 | MS.gene99468:CDS | 60.0% | |
| ATGTGGCTGTGGCCCATGTC+AGG | - | chr4.2:83306941-83306960 | MS.gene99468:CDS | 60.0% | |
| GCCACAGCCACATTTGACGG+TGG | + | chr4.2:83306934-83306953 | None:intergenic | 60.0% | |
| GCCACCGTCAAATGTGGCTG+TGG | - | chr4.2:83306930-83306949 | MS.gene99468:CDS | 60.0% | |
| CACTCGGGTCACGCTCCAGA+TGG | - | chr4.2:83307463-83307482 | MS.gene99468:CDS | 65.0% | |
| GCTGTGGCCCATGTCAGGCT+GGG | - | chr4.2:83306946-83306965 | MS.gene99468:CDS | 65.0% | |
| AGTTCGCGCGAGCGCCAGGT+GGG | - | chr4.2:83306908-83306927 | MS.gene99468:CDS | 70.0% | |
| CCATGTCAGGCTGGGCGGAC+GGG | - | chr4.2:83306954-83306973 | MS.gene99468:CDS | 70.0% | |
| CCCATGTCAGGCTGGGCGGA+CGG | - | chr4.2:83306953-83306972 | MS.gene99468:CDS | 70.0% | |
| CCGTCCGCCCAGCCTGACAT+GGG | + | chr4.2:83306956-83306975 | None:intergenic | 70.0% | |
| GGCTGTGGCCCATGTCAGGC+TGG | - | chr4.2:83306945-83306964 | MS.gene99468:CDS | 70.0% | |
| GTGGCCCATGTCAGGCTGGG+CGG | - | chr4.2:83306949-83306968 | MS.gene99468:CDS | 70.0% | |
| !! | GCGGACGGGCGGCTTTGTTG+GGG | - | chr4.2:83306968-83306987 | MS.gene99468:CDS | 70.0% |
| !! | GGCGGACGGGCGGCTTTGTT+GGG | - | chr4.2:83306967-83306986 | MS.gene99468:CDS | 70.0% |
| CCCGTCCGCCCAGCCTGACA+TGG | + | chr4.2:83306957-83306976 | None:intergenic | 75.0% | |
| CCTGGCGCTCGCGCGAACTC+CGG | + | chr4.2:83306907-83306926 | None:intergenic | 75.0% | |
| GAGTTCGCGCGAGCGCCAGG+TGG | - | chr4.2:83306907-83306926 | MS.gene99468:CDS | 75.0% | |
| TGTCAGGCTGGGCGGACGGG+CGG | - | chr4.2:83306957-83306976 | MS.gene99468:CDS | 75.0% | |
| ! | GGGCGGACGGGCGGCTTTGT+TGG | - | chr4.2:83306966-83306985 | MS.gene99468:CDS | 75.0% |
| ! | CCGGAGTTCGCGCGAGCGCC+AGG | - | chr4.2:83306904-83306923 | MS.gene99468:CDS | 80.0% |
| ! | GGCGCTCGCGCGAACTCCGG+CGG | + | chr4.2:83306904-83306923 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 83306856 | 83309837 | 83306856 | ID=MS.gene99468 |
| chr4.2 | mRNA | 83306856 | 83309837 | 83306856 | ID=MS.gene99468.t1;Parent=MS.gene99468 |
| chr4.2 | exon | 83309484 | 83309837 | 83309484 | ID=MS.gene99468.t1.exon1;Parent=MS.gene99468.t1 |
| chr4.2 | CDS | 83309484 | 83309837 | 83309484 | ID=cds.MS.gene99468.t1;Parent=MS.gene99468.t1 |
| chr4.2 | exon | 83306856 | 83307548 | 83306856 | ID=MS.gene99468.t1.exon2;Parent=MS.gene99468.t1 |
| chr4.2 | CDS | 83306856 | 83307548 | 83306856 | ID=cds.MS.gene99468.t1;Parent=MS.gene99468.t1 |
| Gene Sequence |
| Protein sequence |
