AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048185.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048185.01.T01 MTR_4g097175 100.000 136 0 0 263 398 1 136 1.26e-92 275
MsG0080048185.01.T01 MTR_4g097175 100.000 132 0 0 124 255 1 132 1.34e-89 267
MsG0080048185.01.T01 MTR_1g023630 100.000 136 0 0 263 398 1 136 1.26e-92 275
MsG0080048185.01.T01 MTR_1g023630 100.000 132 0 0 124 255 1 132 1.34e-89 267
MsG0080048185.01.T01 MTR_8g061940 100.000 136 0 0 263 398 1 136 1.26e-92 275
MsG0080048185.01.T01 MTR_8g061940 100.000 132 0 0 124 255 1 132 1.34e-89 267
MsG0080048185.01.T01 MTR_8g099430 99.265 136 1 0 263 398 1 136 4.96e-92 273
MsG0080048185.01.T01 MTR_8g099430 99.242 132 1 0 124 255 1 132 5.30e-89 265
MsG0080048185.01.T01 MTR_4g097170 99.265 136 1 0 263 398 42 177 2.15e-90 270
MsG0080048185.01.T01 MTR_4g097170 99.242 132 1 0 124 255 42 173 2.28e-87 263
MsG0080048185.01.T01 MTR_7g059070 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_7g059070 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_5g029820 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_5g029820 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_5g029770 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_5g029770 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_4g065990 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_4g065990 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_4g088150 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_4g088150 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_2g035230 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_2g035230 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_8g092720 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_8g092720 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_8g063500 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_8g063500 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_8g103245 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_8g103245 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_8g092820 97.059 136 4 0 263 398 1 136 3.82e-89 266
MsG0080048185.01.T01 MTR_8g092820 96.970 132 4 0 124 255 1 132 4.02e-86 258
MsG0080048185.01.T01 MTR_7g013610 97.059 136 4 0 263 398 100 235 2.46e-88 267
MsG0080048185.01.T01 MTR_7g013610 95.522 134 6 0 122 255 98 231 1.95e-85 260
MsG0080048185.01.T01 MTR_2g082310 92.647 136 10 0 263 398 1 136 3.94e-86 258
MsG0080048185.01.T01 MTR_2g082310 92.424 132 10 0 124 255 1 132 4.35e-83 250
MsG0080048185.01.T01 MTR_2g082340 92.647 136 10 0 263 398 1 136 3.94e-86 258
MsG0080048185.01.T01 MTR_2g082340 92.424 132 10 0 124 255 1 132 4.35e-83 250
MsG0080048185.01.T01 MTR_4g097160 93.651 126 8 0 1 126 1 126 7.64e-84 253
MsG0080048185.01.T01 MTR_2g082370 86.301 146 10 1 263 398 1 146 2.81e-80 243
MsG0080048185.01.T01 MTR_2g082370 85.915 142 10 1 124 255 1 142 2.67e-77 236
MsG0080048185.01.T01 MTR_2g082400 85.294 136 18 2 263 397 1 135 1.10e-72 224
MsG0080048185.01.T01 MTR_2g082400 84.962 133 18 2 124 255 1 132 2.92e-70 217
MsG0080048185.01.T01 MTR_7g013600 83.036 112 19 0 287 398 2 113 5.61e-59 187
MsG0080048185.01.T01 MTR_7g013600 82.569 109 19 0 148 256 2 110 4.29e-57 182
MsG0080048185.01.T01 MTR_7g023830 67.164 134 43 1 263 396 1 133 1.11e-52 172
MsG0080048185.01.T01 MTR_7g023830 65.942 138 43 2 124 261 1 134 4.60e-52 171
MsG0080048185.01.T01 MTR_1g023630 77.477 111 23 1 124 234 1 109 4.06e-51 167
MsG0080048185.01.T01 MTR_1g023630 77.477 111 23 1 263 373 1 109 4.06e-51 167
MsG0080048185.01.T01 MTR_7g023880 60.150 133 39 3 265 396 18 137 4.81e-41 142
MsG0080048185.01.T01 MTR_7g023880 59.124 137 39 4 126 261 18 138 1.90e-40 140
MsG0080048185.01.T01 MTR_5g024630 63.793 116 39 2 124 239 1 113 5.55e-39 135
MsG0080048185.01.T01 MTR_5g024630 63.793 116 39 2 263 378 1 113 5.55e-39 135
MsG0080048185.01.T01 MTR_5g024530 65.455 110 15 2 142 251 68 154 1.02e-36 131
MsG0080048185.01.T01 MTR_5g024530 65.455 110 15 2 281 390 68 154 1.02e-36 131
MsG0080048185.01.T01 MTR_0197s0100 96.970 66 2 0 124 189 1 66 2.24e-36 130
MsG0080048185.01.T01 MTR_0197s0100 96.970 66 2 0 263 328 1 66 2.24e-36 130
MsG0080048185.01.T01 MTR_8g027840 56.122 98 42 1 299 395 28 125 4.57e-28 107
MsG0080048185.01.T01 MTR_8g027840 56.250 96 41 1 160 254 28 123 1.71e-27 106
MsG0080048185.01.T01 MTR_8g105150 59.783 92 3 2 160 250 11 69 9.81e-24 94.0
MsG0080048185.01.T01 MTR_8g105150 59.783 92 3 2 299 389 11 69 9.81e-24 94.0
MsG0080048185.01.T01 MTR_8g092740 97.368 38 1 0 361 398 118 155 1.08e-17 80.1
MsG0080048185.01.T01 MTR_8g092740 94.286 35 2 0 222 256 118 152 5.98e-15 72.4
MsG0080048185.01.T01 MTR_5g089120 60.345 58 23 0 202 259 3 60 1.78e-15 72.0
MsG0080048185.01.T01 MTR_5g089120 64.000 50 18 0 341 390 3 52 5.81e-14 67.8
MsG0080048185.01.T01 MTR_5g024600 62.963 54 20 0 124 177 1 54 7.68e-14 66.2
MsG0080048185.01.T01 MTR_5g024600 62.963 54 20 0 263 316 1 54 7.68e-14 66.2
MsG0080048185.01.T01 MTR_4g128040 61.702 47 18 0 191 237 9 55 2.51e-11 59.7
MsG0080048185.01.T01 MTR_4g128040 61.702 47 18 0 330 376 9 55 2.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048185.01.T01 AT5G10980 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT5G10980 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40040 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40040 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40040 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40040 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40040 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40040 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40030 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40030 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40030 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40030 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40030 100.000 136 0 0 263 398 1 136 1.32e-92 275
MsG0080048185.01.T01 AT4G40030 100.000 132 0 0 124 255 1 132 1.41e-89 267
MsG0080048185.01.T01 AT4G40030 100.000 136 0 0 263 398 29 164 1.86e-92 275
MsG0080048185.01.T01 AT4G40030 100.000 132 0 0 124 255 29 160 2.23e-89 267
MsG0080048185.01.T01 AT5G65360 97.059 136 4 0 263 398 1 136 3.33e-89 266
MsG0080048185.01.T01 AT5G65360 96.970 132 4 0 124 255 1 132 3.46e-86 258
MsG0080048185.01.T01 AT5G10390 97.059 136 4 0 263 398 1 136 3.33e-89 266
MsG0080048185.01.T01 AT5G10390 96.970 132 4 0 124 255 1 132 3.46e-86 258
MsG0080048185.01.T01 AT5G10400 97.059 136 4 0 263 398 1 136 3.33e-89 266
MsG0080048185.01.T01 AT5G10400 96.970 132 4 0 124 255 1 132 3.46e-86 258
MsG0080048185.01.T01 AT3G27360 97.059 136 4 0 263 398 1 136 3.33e-89 266
MsG0080048185.01.T01 AT3G27360 96.970 132 4 0 124 255 1 132 3.46e-86 258
MsG0080048185.01.T01 AT1G09200 97.059 136 4 0 263 398 1 136 3.33e-89 266
MsG0080048185.01.T01 AT1G09200 96.970 132 4 0 124 255 1 132 3.46e-86 258
MsG0080048185.01.T01 AT1G75600 96.324 136 5 0 263 398 1 136 9.56e-89 265
MsG0080048185.01.T01 AT1G75600 96.212 132 5 0 124 255 1 132 1.02e-85 257
MsG0080048185.01.T01 AT1G13370 94.853 136 7 0 263 398 1 136 2.01e-87 261
MsG0080048185.01.T01 AT1G13370 95.489 133 6 0 124 256 1 133 7.26e-86 257
MsG0080048185.01.T01 AT5G65350 92.647 136 10 0 263 398 1 136 8.67e-85 254
MsG0080048185.01.T01 AT5G65350 92.424 132 10 0 124 255 1 132 8.49e-82 247
MsG0080048185.01.T01 AT1G19890 90.511 137 12 1 263 398 1 137 1.49e-81 246
MsG0080048185.01.T01 AT1G19890 90.226 133 12 1 124 255 1 133 1.45e-78 239
MsG0080048185.01.T01 AT5G12910 71.111 135 34 2 263 397 1 130 2.31e-61 194
MsG0080048185.01.T01 AT5G12910 71.212 132 33 2 124 255 1 127 2.29e-59 189
MsG0080048185.01.T01 AT5G67590 75.472 106 24 1 19 122 20 125 1.50e-54 177
MsG0080048185.01.T01 AT1G01370 54.867 113 48 2 286 396 63 174 3.26e-29 112
MsG0080048185.01.T01 AT1G01370 55.455 110 46 2 147 254 63 171 1.05e-28 110
MsG0080048185.01.T01 AT1G01370 54.867 113 48 2 286 396 63 174 3.26e-29 112
MsG0080048185.01.T01 AT1G01370 55.455 110 46 2 147 254 63 171 1.05e-28 110
MsG0080048185.01.T01 AT1G01370 54.867 113 48 2 286 396 63 174 3.26e-29 112
MsG0080048185.01.T01 AT1G01370 55.455 110 46 2 147 254 63 171 1.05e-28 110
MsG0080048185.01.T01 AT1G01370 54.867 113 48 2 286 396 63 174 3.26e-29 112
MsG0080048185.01.T01 AT1G01370 55.455 110 46 2 147 254 63 171 1.05e-28 110

Find 159 sgRNAs with CRISPR-Local

Find 848 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGAGATCGGTTTGGTTTC+TGG 0.096734 contig240end:+7910 MsG0080048185.01.T01:CDS
CGCGACTCGCCGCGCGTTGC+AGG 0.230181 contig240end:-7822 None:intergenic
GAATCACCAACATGAGAATA+TGG 0.271571 contig240end:-8943 None:intergenic
CGGTGGAGAACCGGCGGGTG+AGG 0.311478 contig240end:-7864 None:intergenic
TTGGTTGCAAGTTGCTTCCT+TGG 0.333909 contig240end:-20805 None:intergenic
CCTAAGGAGGATGCTGCTTT+TGG 0.334705 contig240end:+21512 MsG0080048185.01.T01:exon
CACCGAAGAGCAACAGTTCC+TGG 0.341134 contig240end:-20993 None:intergenic
TTGGTTGCAAGTTGCTTCCT+AGG 0.341167 contig240end:-16586 None:intergenic
AGAAAGGTTCATCTTGTCTT+TGG 0.345448 contig240end:+7752 MsG0080048185.01.T01:five_prime_UTR
TCAAGAGCTCGGTACTCTTC+TGG 0.348030 contig240end:-21175 None:intergenic
CCTTGCCAACTGGATGTCCT+TGG 0.351370 contig240end:-17266 None:intergenic
CCTTGCCAACTGGATGTCCT+TGG 0.351370 contig240end:-21470 None:intergenic
CACGGATCCTCCTTGCCAAC+TGG 0.363910 contig240end:-17276 None:intergenic
CACGGATCCTCCTTGCCAAC+TGG 0.363910 contig240end:-21480 None:intergenic
CACCGAAGAGCAACAGTTCC+GGG 0.372127 contig240end:-16767 None:intergenic
TTCTGCGAAGGTGTTCTTGT+GGG 0.373590 contig240end:-7936 None:intergenic
GCTAGAAATACTAGATTAGA+TGG 0.379840 contig240end:-21766 None:intergenic
CAAACCGATCTCGCCGGGTT+TGG 0.395723 contig240end:-7902 None:intergenic
TGAAATTGCTCAAGACTTCA+AGG 0.405126 contig240end:+17017 MsG0080048185.01.T01:CDS
TCACCGAAGAGCAACAGTTC+CGG 0.407614 contig240end:-16768 None:intergenic
TAATTTGCTTGCAATGACTT+TGG 0.419143 contig240end:+21670 MsG0080048185.01.T01:three_prime_UTR
GCGGGTGAGGGTGGCGCGTA+GGG 0.421897 contig240end:-7851 None:intergenic
CTGATGGGGTGGACATCCAC+CGG 0.425057 contig240end:+8916 MsG0080048185.01.T01:CDS
CTTGCCAACTGGATGTCCTT+GGG 0.434839 contig240end:-17265 None:intergenic
CTTGCCAACTGGATGTCCTT+GGG 0.434839 contig240end:-21469 None:intergenic
ACTGCTACTCAACAAGGATC+TGG 0.435305 contig240end:+8260 MsG0080048185.01.T01:CDS
CCAATGCGTCGGTGGAGAAC+CGG 0.436852 contig240end:-7873 None:intergenic
ATATCTTGTTGGTCTCTTTG+AGG 0.438404 contig240end:+21402 MsG0080048185.01.T01:CDS
GGATGTTCGACATCGTTTGA+TGG 0.441021 contig240end:-7801 None:intergenic
TGAAATTGCTCAGGACTTCA+AGG 0.441698 contig240end:+21229 MsG0080048185.01.T01:CDS
TTCTTAACTCCACCAGTAGT+TGG 0.444620 contig240end:-20954 None:intergenic
ATATCTTGTTGGTCTGTTTG+AGG 0.444642 contig240end:+17198 MsG0080048185.01.T01:CDS
GGTGGAGAACCGGCGGGTGA+GGG 0.451743 contig240end:-7863 None:intergenic
GCTGCTGAGGCATATCTTGT+TGG 0.457640 contig240end:+17187 MsG0080048185.01.T01:CDS
GCTGCTGAGGCATATCTTGT+TGG 0.457640 contig240end:+21391 MsG0080048185.01.T01:CDS
TTGAATTGATTTAGTTGCTA+GGG 0.461048 contig240end:+21573 MsG0080048185.01.T01:three_prime_UTR
CAAACCCGGCGAGATCGGTT+TGG 0.466889 contig240end:+7903 MsG0080048185.01.T01:CDS
CACGAACCAACCTCTGGAAT+GGG 0.467959 contig240end:-21208 None:intergenic
GCCCCGGAACTGTTGCTCTT+CGG 0.468662 contig240end:+16765 MsG0080048185.01.T01:CDS
CGCAAGTCTGCACCAACTAC+TGG 0.471576 contig240end:+20942 MsG0080048185.01.T01:CDS
GCCCAGGAACTGTTGCTCTT+CGG 0.472314 contig240end:+20991 MsG0080048185.01.T01:CDS
TTCTTACTATGCATTCTCCA+TGG 0.474761 contig240end:-18360 None:intergenic
GGCGGGTGAGGGTGGCGCGT+AGG 0.475360 contig240end:-7852 None:intergenic
CAACAAGGATCTGGGAATGT+TGG 0.476610 contig240end:+8269 MsG0080048185.01.T01:CDS
CTGCAACGCGCGGCGAGTCG+CGG 0.477878 contig240end:+7823 MsG0080048185.01.T01:CDS
CTTCCTTGGTGCCTTACCAC+CGG 0.479634 contig240end:-20791 None:intergenic
TGCATTGCAAGAGGCTGCTG+AGG 0.479818 contig240end:+17174 MsG0080048185.01.T01:CDS
TGCATTGCAAGAGGCTGCTG+AGG 0.479818 contig240end:+21378 MsG0080048185.01.T01:CDS
AGAGTACTGAGCTCTTGATC+AGG 0.482557 contig240end:+16968 MsG0080048185.01.T01:CDS
CGTAAGTCTGCTCCCACTAC+TGG 0.483075 contig240end:+16716 MsG0080048185.01.T01:CDS
AGAGTACCGAGCTCTTGATC+AGG 0.484025 contig240end:+21180 MsG0080048185.01.T01:CDS
CAAACTGCTCGTAAGTCTAC+TGG 0.493098 contig240end:+16553 MsG0080048185.01.T01:CDS
TGATGGGGTGGACATCCACC+GGG 0.495418 contig240end:+8917 MsG0080048185.01.T01:CDS
GGAGAACCGGCGGGTGAGGG+TGG 0.495599 contig240end:-7860 None:intergenic
ATTGAATTGATTTAGTTGCT+AGG 0.497538 contig240end:+21572 MsG0080048185.01.T01:three_prime_UTR
ATCCGTGGTGAGCGTGCCTA+AGG 0.497978 contig240end:+21496 MsG0080048185.01.T01:CDS
ATGCAAGCACAGCATGACTC+TGG 0.500306 contig240end:-17156 None:intergenic
ATGCAAGCACAGCATGACTC+TGG 0.500306 contig240end:-21360 None:intergenic
TCGTAAGTCAACCGGTGGTA+AGG 0.501661 contig240end:+20780 MsG0080048185.01.T01:CDS
CCGGTTCTCCACCGACGCAT+TGG 0.501885 contig240end:+7873 MsG0080048185.01.T01:CDS
CAATTTCACGAACCAACCTC+TGG 0.503886 contig240end:-21214 None:intergenic
CTAGATTAGATGGCAACAAA+AGG 0.506318 contig240end:-21756 None:intergenic
CAATTTCACGAACCAACCTC+TGG 0.507537 contig240end:-17002 None:intergenic
ATTTGCAGAGAGACATGGTT+GGG 0.508079 contig240end:+9002 MsG0080048185.01.T01:CDS
GATGTTCGACATCGTTTGAT+GGG 0.508364 contig240end:-7800 None:intergenic
TGACTTACGAGCTGTTTGCT+TGG 0.508768 contig240end:-20767 None:intergenic
GTTGGTTCGTGAAATTGCTC+AGG 0.513873 contig240end:+21220 MsG0080048185.01.T01:CDS
TGCTGTGCTTGCATTGCAAG+AGG 0.513898 contig240end:+17165 MsG0080048185.01.T01:CDS
TGCTGTGCTTGCATTGCAAG+AGG 0.513898 contig240end:+21369 MsG0080048185.01.T01:CDS
GAGTCCAAACCCGGCGAGAT+CGG 0.518773 contig240end:+7898 MsG0080048185.01.T01:CDS
CAAACAGCTCGTAAGTCAAC+CGG 0.519692 contig240end:+20772 MsG0080048185.01.T01:CDS
TCACGAACCAACCTCTGGAA+TGG 0.521454 contig240end:-21209 None:intergenic
TTTGGTGCTGTTTAGATGGG+TGG 0.522117 contig240end:+21530 MsG0080048185.01.T01:three_prime_UTR
GAAACCAAACCGATCTCGCC+GGG 0.523267 contig240end:-7907 None:intergenic
TCTTACTATGCATTCTCCAT+GGG 0.524260 contig240end:-18359 None:intergenic
GGGAAAATCCACTGATGGGG+TGG 0.525036 contig240end:+8905 MsG0080048185.01.T01:CDS
GAAGCTCCCCTTCCAGAGGT+TGG 0.527763 contig240end:+16990 MsG0080048185.01.T01:CDS
TGATACTGAAGAGGCGGCCA+AGG 0.528274 contig240end:+8978 MsG0080048185.01.T01:CDS
AGACTTACGAGCAGTTTGCT+TGG 0.530724 contig240end:-16548 None:intergenic
TGTTGAGTAGCAGTTCTAGC+AGG 0.532845 contig240end:-8251 None:intergenic
ATTCCTAGTTTGATTAATTG+CGG 0.536987 contig240end:+21605 MsG0080048185.01.T01:three_prime_UTR
ATGTCTCTCTGCAAATTCCT+TGG 0.539824 contig240end:-8995 None:intergenic
CTGCTACTCAACAAGGATCT+GGG 0.541115 contig240end:+8261 MsG0080048185.01.T01:CDS
CACAAGAACACCTTCGCAGA+AGG 0.542985 contig240end:+7938 MsG0080048185.01.T01:CDS
AGGTGGGAAAATCCACTGAT+GGG 0.545838 contig240end:+8901 MsG0080048185.01.T01:intron
TTTCTTAACTCCACCAGTAG+TGG 0.546326 contig240end:-16729 None:intergenic
TAATAGTAACTCGCTTGGCA+TGG 0.547452 contig240end:-17240 None:intergenic
TAATAGTAACTCGCTTGGCA+TGG 0.547452 contig240end:-21444 None:intergenic
TAGGTGGGAAAATCCACTGA+TGG 0.547689 contig240end:+8900 MsG0080048185.01.T01:intron
CACGAACCAACCTCTGGAAG+GGG 0.550311 contig240end:-16996 None:intergenic
GCATTGGTCGAGTCCAAACC+CGG 0.551552 contig240end:+7889 MsG0080048185.01.T01:CDS
GTGGATGTCCACCCCATCAG+TGG 0.551741 contig240end:-8913 None:intergenic
GATCTGGGAATGTTGGAAGA+TGG 0.551960 contig240end:+8276 MsG0080048185.01.T01:CDS
AATCACCAACATGAGAATAT+GGG 0.552566 contig240end:-8942 None:intergenic
CCAAAAGCAGCATCCTCCTT+AGG 0.555358 contig240end:-21512 None:intergenic
ACCGAAGAGCAACAGTTCCT+GGG 0.559961 contig240end:-20992 None:intergenic
TACGCGCCACCCTCACCCGC+CGG 0.560589 contig240end:+7854 MsG0080048185.01.T01:CDS
TTCTTAACTCCACCAGTAGT+GGG 0.561000 contig240end:-16728 None:intergenic
CAACGCGCGGCGAGTCGCGG+TGG 0.565232 contig240end:+7826 MsG0080048185.01.T01:CDS
TCATGTTGGTGATTCTGCGT+TGG 0.569349 contig240end:+8951 MsG0080048185.01.T01:CDS
AACACATTTGTAGCTTCCCA+TGG 0.569530 contig240end:+18343 MsG0080048185.01.T01:intron
GAAGCTCCCATTCCAGAGGT+TGG 0.572362 contig240end:+21202 MsG0080048185.01.T01:CDS
GGGCATAATAGTAACTCGCT+TGG 0.573260 contig240end:-17245 None:intergenic
GGGCATAATAGTAACTCGCT+TGG 0.573260 contig240end:-21449 None:intergenic
AAGGAAGCAACTTGCAACCA+AGG 0.574800 contig240end:+20807 MsG0080048185.01.T01:CDS
AGAAACCAAACCGATCTCGC+CGG 0.576906 contig240end:-7908 None:intergenic
TCACCGCAATTAATCAAACT+AGG 0.579233 contig240end:-21608 None:intergenic
AAACCACATCGTTACCGCCC+CGG 0.580189 contig240end:+16749 MsG0080048185.01.T01:CDS
CGTGGTGAGCGTGCCTAAGG+AGG 0.580654 contig240end:+21499 MsG0080048185.01.T01:exon
AAGCCACATCGTTATCGCCC+AGG 0.581263 contig240end:+20975 MsG0080048185.01.T01:CDS
AACATGAGAATATGGGTCCC+CGG 0.585265 contig240end:-8935 None:intergenic
TCACGAACCAACCTCTGGAA+GGG 0.587957 contig240end:-16997 None:intergenic
CCAAGGACATCCAGTTGGCA+AGG 0.588868 contig240end:+17266 MsG0080048185.01.T01:CDS
CCAAGGACATCCAGTTGGCA+AGG 0.588868 contig240end:+21470 MsG0080048185.01.T01:CDS
TTCACGAACCAACCTCTGGA+AGG 0.592307 contig240end:-16998 None:intergenic
TCGTAAGTCTACTGGTGGAA+AGG 0.600087 contig240end:+16561 MsG0080048185.01.T01:CDS
CTTCTGCGAAGGTGTTCTTG+TGG 0.600114 contig240end:-7937 None:intergenic
TGAATTGATTTAGTTGCTAG+GGG 0.600803 contig240end:+21574 MsG0080048185.01.T01:three_prime_UTR
AAGGAATTTGCAGAGAGACA+TGG 0.601026 contig240end:+8997 MsG0080048185.01.T01:CDS
AAGTCTGCTCCCACTACTGG+TGG 0.603052 contig240end:+16719 MsG0080048185.01.T01:CDS
TAGGAAGCAACTTGCAACCA+AGG 0.610266 contig240end:+16588 MsG0080048185.01.T01:CDS
GTCGAACATCCTGCAACGCG+CGG 0.615002 contig240end:+7813 MsG0080048185.01.T01:CDS
ACAAGAACACCTTCGCAGAA+GGG 0.616137 contig240end:+7939 MsG0080048185.01.T01:CDS
CTGGGAATGTTGGAAGATGG+AGG 0.616241 contig240end:+8279 MsG0080048185.01.T01:CDS
ATGCGTCGGTGGAGAACCGG+CGG 0.619903 contig240end:-7870 None:intergenic
GAGCTTCCTGATCAAGAGCT+CGG 0.624511 contig240end:-21186 None:intergenic
GCGAGTTACTATTATGCCCA+AGG 0.629580 contig240end:+17249 MsG0080048185.01.T01:CDS
GCGAGTTACTATTATGCCCA+AGG 0.629580 contig240end:+21453 MsG0080048185.01.T01:CDS
TTTGGACTCGACCAATGCGT+CGG 0.631675 contig240end:-7884 None:intergenic
GGACTCGACCAATGCGTCGG+TGG 0.631789 contig240end:-7881 None:intergenic
GGCATAATACCCTTCTGCGA+AGG 0.632958 contig240end:-7948 None:intergenic
TCAGGAAGCTCCCCTTCCAG+AGG 0.635098 contig240end:+16986 MsG0080048185.01.T01:CDS
GGGGACCCATATTCTCATGT+TGG 0.636175 contig240end:+8937 MsG0080048185.01.T01:CDS
CTACTGGTGGAAAGGCACCT+AGG 0.637308 contig240end:+16569 MsG0080048185.01.T01:CDS
GCTAGAACTGCTACTCAACA+AGG 0.644244 contig240end:+8254 MsG0080048185.01.T01:CDS
TGCGTCGGTGGAGAACCGGC+GGG 0.644788 contig240end:-7869 None:intergenic
GTTCCGGGGCGGTAACGATG+TGG 0.646981 contig240end:-16752 None:intergenic
CTCCTTAGGCACGCTCACCA+CGG 0.648997 contig240end:-21498 None:intergenic
AAGTCTGCACCAACTACTGG+TGG 0.650548 contig240end:+20945 MsG0080048185.01.T01:CDS
ACCGAAGAGCAACAGTTCCG+GGG 0.653413 contig240end:-16766 None:intergenic
TATGCCCAAGGACATCCAGT+TGG 0.656475 contig240end:+17261 MsG0080048185.01.T01:CDS
TATGCCCAAGGACATCCAGT+TGG 0.656475 contig240end:+21465 MsG0080048185.01.T01:CDS
CAACCGGTGGTAAGGCACCA+AGG 0.657003 contig240end:+20788 MsG0080048185.01.T01:CDS
ACTGCTCGTAAGTCTACTGG+TGG 0.660657 contig240end:+16556 MsG0080048185.01.T01:CDS
GAGACATGGTTGGGAATACG+TGG 0.660765 contig240end:+9011 MsG0080048185.01.T01:CDS
TCAGGAAGCTCCCATTCCAG+AGG 0.664518 contig240end:+21198 MsG0080048185.01.T01:CDS
CAGTTGGCAAGGAGGATCCG+TGG 0.664833 contig240end:+17277 MsG0080048185.01.T01:CDS
CAGTTGGCAAGGAGGATCCG+TGG 0.664833 contig240end:+21481 MsG0080048185.01.T01:CDS
CAGCATGACTCTGGAAACGA+AGG 0.672290 contig240end:-17147 None:intergenic
CAGCATGACTCTGGAAACGA+AGG 0.672290 contig240end:-21351 None:intergenic
AGGACATCCAGTTGGCAAGG+AGG 0.674393 contig240end:+17269 MsG0080048185.01.T01:CDS
AGGACATCCAGTTGGCAAGG+AGG 0.674393 contig240end:+21473 MsG0080048185.01.T01:CDS
GGTGGGAAAATCCACTGATG+GGG 0.677881 contig240end:+8902 MsG0080048185.01.T01:intron
AATTTGCAGAGAGACATGGT+TGG 0.679154 contig240end:+9001 MsG0080048185.01.T01:CDS
GTTCCTGGGCGATAACGATG+TGG 0.684844 contig240end:-20978 None:intergenic
GATGGGGTGGACATCCACCG+GGG 0.703805 contig240end:+8918 MsG0080048185.01.T01:CDS
ATGAGAATATGGGTCCCCGG+TGG 0.707902 contig240end:-8932 None:intergenic
ACAGCTCGTAAGTCAACCGG+TGG 0.708150 contig240end:+20775 MsG0080048185.01.T01:CDS
GAAGAGCAACAGTTCCGGGG+CGG 0.724004 contig240end:-16763 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGTAATAACTAATAA+TGG + contig240end:8844-8863 MsG0080048185.01.T01:intron 10.0%
!! AATATCTAATTATACATATA+TGG + contig240end:15584-15603 MsG0080048185.01.T01:intron 10.0%
!! ATGATATTTATATAAAGTTT+GGG - contig240end:19226-19245 None:intergenic 10.0%
!! ATTTCTGATTAAAAATAAAT+GGG + contig240end:11875-11894 MsG0080048185.01.T01:intron 10.0%
!! TATGATATTTATATAAAGTT+TGG - contig240end:19227-19246 None:intergenic 10.0%
!! TTGGAAATTAAAAAAAAAAA+CGG - contig240end:17729-17748 None:intergenic 10.0%
!!! AATGCATATTTTTATTTATT+TGG - contig240end:14926-14945 None:intergenic 10.0%
!!! ATATGTATAATTAGATATTT+TGG - contig240end:15583-15602 None:intergenic 10.0%
!!! TATTTCTGATTAAAAATAAA+TGG + contig240end:11874-11893 MsG0080048185.01.T01:intron 10.0%
!!! TGAACTATAATAATATTTTT+GGG + contig240end:13614-13633 MsG0080048185.01.T01:intron 10.0%
!!! TTAGATTTTTTTCTTTAAAA+AGG - contig240end:14117-14136 None:intergenic 10.0%
!!! TTGAACTATAATAATATTTT+GGG + contig240end:13613-13632 MsG0080048185.01.T01:intron 10.0%
!!! TTGAACTATAATAATATTTT+TGG + contig240end:13613-13632 MsG0080048185.01.T01:intron 10.0%
!! ATAGATCATTGAAATATAAT+GGG + contig240end:8481-8500 MsG0080048185.01.T01:intron 15.0%
!! CAAACTATGAAAAATAATAT+GGG - contig240end:12711-12730 None:intergenic 15.0%
!! CTATCAATTAAAATTATGAT+AGG + contig240end:16363-16382 MsG0080048185.01.T01:intron 15.0%
!! GAAAAAAAAAAATTAACAAC+CGG + contig240end:13265-13284 MsG0080048185.01.T01:intron 15.0%
!! TATAGATCATTGAAATATAA+TGG + contig240end:8480-8499 MsG0080048185.01.T01:intron 15.0%
!! TATATTTGTTTCATTATCAT+GGG + contig240end:7974-7993 MsG0080048185.01.T01:intron 15.0%
!! TCAAACTATGAAAAATAATA+TGG - contig240end:12712-12731 None:intergenic 15.0%
!! TGATATTTATATAAAGTTTG+GGG - contig240end:19225-19244 None:intergenic 15.0%
!! TGGAAATTAAAAAAAAAAAC+GGG - contig240end:17728-17747 None:intergenic 15.0%
!! TTATATTTGTTTCATTATCA+TGG + contig240end:7973-7992 MsG0080048185.01.T01:intron 15.0%
!! TTCGTAAAAAAATAAAAAGA+GGG - contig240end:19341-19360 None:intergenic 15.0%
!! TTCTTCAATTTATGAAATTA+GGG + contig240end:16060-16079 MsG0080048185.01.T01:intron 15.0%
!! TTTAGTAATTTAAATGATAG+TGG + contig240end:11612-11631 MsG0080048185.01.T01:intron 15.0%
!! TTTCTTCAATTTATGAAATT+AGG + contig240end:16059-16078 MsG0080048185.01.T01:intron 15.0%
!!! ATGTTTTCGTAATATTTAAA+TGG + contig240end:17877-17896 MsG0080048185.01.T01:intron 15.0%
!!! ATTATGTTGCATTTTATATT+AGG + contig240end:20443-20462 MsG0080048185.01.T01:intron 15.0%
!!! CTATCTTAATTTTAGTTTTT+GGG + contig240end:21644-21663 MsG0080048185.01.T01:three_prime_UTR 15.0%
!!! CTTGAACTATAATAATATTT+TGG + contig240end:13612-13631 MsG0080048185.01.T01:intron 15.0%
!!! GAACTATAATAATATTTTTG+GGG + contig240end:13615-13634 MsG0080048185.01.T01:intron 15.0%
!!! GTTTCTAATAATTTGTTATT+TGG + contig240end:21119-21138 MsG0080048185.01.T01:intron 15.0%
!!! TAATAATTTGTTATTTGGAT+TGG + contig240end:21124-21143 MsG0080048185.01.T01:intron 15.0%
!!! TAATGAAATTTTTCAGAAAA+TGG + contig240end:13941-13960 MsG0080048185.01.T01:intron 15.0%
!!! TCAAATTTTTTAGGAAATTA+GGG + contig240end:15962-15981 MsG0080048185.01.T01:intron 15.0%
!!! TGAACTATAATAATATTTTG+GGG + contig240end:13878-13897 MsG0080048185.01.T01:intron 15.0%
!!! TGTTTTCGTAATATTTAAAT+GGG + contig240end:17878-17897 MsG0080048185.01.T01:intron 15.0%
!!! TTCAAATTTTTTAGGAAATT+AGG + contig240end:15961-15980 MsG0080048185.01.T01:intron 15.0%
!!! TTCTTTTCTTCAAATTTTTT+AGG + contig240end:15953-15972 MsG0080048185.01.T01:intron 15.0%
!!! TTTTATTTATTTGGCTTTTT+TGG - contig240end:14917-14936 None:intergenic 15.0%
!! AAAAAAAAAAAAATGAACGC+AGG + contig240end:19079-19098 MsG0080048185.01.T01:intron 20.0%
!! AAATAACTTCATTATCAGAA+GGG - contig240end:18926-18945 None:intergenic 20.0%
!! AAATTAAAAAATACACCAAC+CGG - contig240end:9851-9870 None:intergenic 20.0%
!! AAATTCAGAAATTGAAAACT+TGG + contig240end:10304-10323 MsG0080048185.01.T01:intron 20.0%
!! AACTTCAACAGAAATTAAAA+TGG + contig240end:10181-10200 MsG0080048185.01.T01:intron 20.0%
!! AAGAATCAAAGTATAAATTC+AGG - contig240end:8807-8826 None:intergenic 20.0%
!! AATCCATATTATCTAAATGT+TGG + contig240end:14048-14067 MsG0080048185.01.T01:intron 20.0%
!! ACAAATTTAACAATAAGATC+AGG - contig240end:8832-8851 None:intergenic 20.0%
!! AGAAGAAAGAAAAACTTAAA+GGG - contig240end:10486-10505 None:intergenic 20.0%
!! AGTTAAGATATGAAAAAGAT+TGG - contig240end:12585-12604 None:intergenic 20.0%
!! ATACATATATGGTAAGAAAA+AGG + contig240end:15595-15614 MsG0080048185.01.T01:intron 20.0%
!! ATTCCAACATTTAGATAATA+TGG - contig240end:14054-14073 None:intergenic 20.0%
!! ATTGTTAATTGTTGAAGATT+AGG + contig240end:20665-20684 MsG0080048185.01.T01:intron 20.0%
!! CAAAAAGTTGAGTATTATAA+AGG + contig240end:12469-12488 MsG0080048185.01.T01:intron 20.0%
!! CAAAACGATTATTATTAGAA+GGG - contig240end:11677-11696 None:intergenic 20.0%
!! CATATATTCATGTTTGATTA+AGG + contig240end:20517-20536 MsG0080048185.01.T01:intron 20.0%
!! GAAATTAAAAAAAAAAACGG+GGG - contig240end:17726-17745 None:intergenic 20.0%
!! GAGTGTAATATTAAATATGA+TGG + contig240end:10697-10716 MsG0080048185.01.T01:intron 20.0%
!! GATAATGAAACAAATATAAG+AGG - contig240end:7972-7991 None:intergenic 20.0%
!! GGAAATTAAAAAAAAAAACG+GGG - contig240end:17727-17746 None:intergenic 20.0%
!! GTTCGTAAAAAAATAAAAAG+AGG - contig240end:19342-19361 None:intergenic 20.0%
!! TAAAGTAAACCATTATCATA+TGG + contig240end:9134-9153 MsG0080048185.01.T01:intron 20.0%
!! TAAATTGAATGAACTATGAA+AGG + contig240end:19940-19959 MsG0080048185.01.T01:intron 20.0%
!! TAATATAACAACATATGTAC+CGG + contig240end:19254-19273 MsG0080048185.01.T01:intron 20.0%
!! TAATATGAAGTGATTGTATT+GGG + contig240end:16839-16858 MsG0080048185.01.T01:intron 20.0%
!! TAATGATGAATATTAATTGC+CGG - contig240end:13287-13306 None:intergenic 20.0%
!! TAATTATGAAAAATGCATAG+AGG + contig240end:18589-18608 MsG0080048185.01.T01:intron 20.0%
!! TACTAAAATCACAATGAAAA+CGG - contig240end:11599-11618 None:intergenic 20.0%
!! TAGAAGAAAGAAAAACTTAA+AGG - contig240end:10487-10506 None:intergenic 20.0%
!! TATAAAATATCTTTGACATG+AGG - contig240end:19422-19441 None:intergenic 20.0%
!! TATCAATTTGAATTGTTCTT+AGG + contig240end:16020-16039 MsG0080048185.01.T01:intron 20.0%
!! TATTCAAGTACATAAGATTT+CGG + contig240end:15153-15172 MsG0080048185.01.T01:intron 20.0%
!! TATTGTTCAATTATGTCTTT+AGG + contig240end:16128-16147 MsG0080048185.01.T01:intron 20.0%
!! TCGTTGACAAAATATATTAT+TGG - contig240end:18691-18710 None:intergenic 20.0%
!! TGAATTGAATTGAATTGAAT+TGG + contig240end:21092-21111 MsG0080048185.01.T01:intron 20.0%
!! TGTTGAAATTATAAGGATTT+AGG + contig240end:11302-11321 MsG0080048185.01.T01:intron 20.0%
!! TTAATATGAAGTGATTGTAT+TGG + contig240end:16838-16857 MsG0080048185.01.T01:intron 20.0%
!! TTAGTTTCTATTCAATTGTT+AGG - contig240end:19768-19787 None:intergenic 20.0%
!! TTATTGTGATTGTTAGTTAA+TGG + contig240end:16395-16414 MsG0080048185.01.T01:intron 20.0%
!! TTGAACATGAAATTAAAAGT+TGG + contig240end:13008-13027 MsG0080048185.01.T01:intron 20.0%
!! TTGTGTTCTTTATTAACAAA+TGG + contig240end:11512-11531 MsG0080048185.01.T01:intron 20.0%
!!! AAAAAAGCAATTTTGATACT+TGG + contig240end:15331-15350 MsG0080048185.01.T01:intron 20.0%
!!! AAACTTTCTAAACTTTGAAA+GGG - contig240end:15867-15886 None:intergenic 20.0%
!!! ATATGTTTCTCGTTTATTTT+GGG + contig240end:17502-17521 MsG0080048185.01.T01:intron 20.0%
!!! ATTGATTGTTATTTGCATTA+TGG + contig240end:16640-16659 MsG0080048185.01.T01:intron 20.0%
!!! ATTTTCTAGAAACACTATAA+CGG + contig240end:19965-19984 MsG0080048185.01.T01:intron 20.0%
!!! CATATTTTATACCCAAAAAA+AGG + contig240end:19370-19389 MsG0080048185.01.T01:intron 20.0%
!!! CTAGTTTTTTGTGTTAAATA+TGG - contig240end:13067-13086 None:intergenic 20.0%
!!! CTATCTGAATTTTAGTTTTT+GGG + contig240end:17446-17465 MsG0080048185.01.T01:intron 20.0%
!!! GATATTTTATACCCAAAAAA+AGG + contig240end:19431-19450 MsG0080048185.01.T01:intron 20.0%
!!! GCTATCTTAATTTTAGTTTT+TGG + contig240end:21643-21662 MsG0080048185.01.T01:three_prime_UTR 20.0%
!!! GGAAATGATTTAGTTTTATA+GGG + contig240end:17371-17390 MsG0080048185.01.T01:intron 20.0%
!!! GGCTAATTTATCTTATTTTT+AGG + contig240end:20625-20644 MsG0080048185.01.T01:intron 20.0%
!!! GTTTGAAATTTTGTTTTTCA+AGG - contig240end:10227-10246 None:intergenic 20.0%
!!! TAACTTGCATACAAATTTTT+TGG - contig240end:18305-18324 None:intergenic 20.0%
!!! TAATGAAACTTTTCAGAAAA+TGG + contig240end:13678-13697 MsG0080048185.01.T01:intron 20.0%
!!! TACGTATTGTTTCTATTAAT+GGG - contig240end:20034-20053 None:intergenic 20.0%
!!! TATATGTTTCTCGTTTATTT+TGG + contig240end:17501-17520 MsG0080048185.01.T01:intron 20.0%
!!! TATTTTAAAACAGTGAGATT+AGG + contig240end:21147-21166 MsG0080048185.01.T01:intron 20.0%
!!! TGGAAATGATTTAGTTTTAT+AGG + contig240end:17370-17389 MsG0080048185.01.T01:intron 20.0%
!!! TGTTCAATTATTTCTAGTTT+AGG + contig240end:16231-16250 MsG0080048185.01.T01:intron 20.0%
!!! TTCTGTTGAAATTTTCTTTA+AGG + contig240end:16793-16812 MsG0080048185.01.T01:intron 20.0%
!!! TTTTTATATGATTTTGTTCC+TGG + contig240end:9868-9887 MsG0080048185.01.T01:intron 20.0%
!!! TTTTTTTTTTCCTTACCTTT+AGG + contig240end:20914-20933 MsG0080048185.01.T01:intron 20.0%
!!! TTTTTTTTTTTGTTCTCCTT+AGG + contig240end:13373-13392 MsG0080048185.01.T01:intron 20.0%
! AAACCCTCAATAATTGATAA+AGG - contig240end:18121-18140 None:intergenic 25.0%
! AAATATGCAATGTTGTAAAC+TGG - contig240end:19553-19572 None:intergenic 25.0%
! AAATCACAATCTATAGAATG+AGG + contig240end:10804-10823 MsG0080048185.01.T01:intron 25.0%
! AAATGGATCTCATGATAATA+TGG - contig240end:13798-13817 None:intergenic 25.0%
! AAATTTCAAATGCTCTTTGT+TGG + contig240end:19741-19760 MsG0080048185.01.T01:intron 25.0%
! AACAAAACAAACAAAACGAA+AGG + contig240end:14506-14525 MsG0080048185.01.T01:intron 25.0%
! AACAACAATAACAATAACCA+CGG - contig240end:11491-11510 None:intergenic 25.0%
! AACATATTATCTGACTCAAT+CGG - contig240end:14196-14215 None:intergenic 25.0%
! AACCCTCAATAATTGATAAA+GGG - contig240end:18120-18139 None:intergenic 25.0%
! AAGATTAGGTCTTAGTTATT+AGG + contig240end:20679-20698 MsG0080048185.01.T01:intron 25.0%
! AAGCTTCTTTCCAAAATTAA+TGG + contig240end:10458-10477 MsG0080048185.01.T01:intron 25.0%
! AAGGTTTAAGTAAATATCTC+CGG - contig240end:14319-14338 None:intergenic 25.0%
! AATCACAATCTATAGAATGA+GGG + contig240end:10805-10824 MsG0080048185.01.T01:intron 25.0%
! AATTAATCATCAATAGATGC+AGG - contig240end:11950-11969 None:intergenic 25.0%
! AATTGAACAATAGCATAAAC+TGG - contig240end:16220-16239 None:intergenic 25.0%
! ACAAAACAAACAAAACGAAA+GGG + contig240end:14507-14526 MsG0080048185.01.T01:intron 25.0%
! AGAAAAAAGCAAAAATTTCC+AGG + contig240end:20209-20228 MsG0080048185.01.T01:intron 25.0%
! AGATAAAAAAAAACTCTGGT+AGG + contig240end:10642-10661 MsG0080048185.01.T01:intron 25.0%
! AGATTCTTCTAACATCTTTA+TGG - contig240end:14885-14904 None:intergenic 25.0%
! AGTATTATAAAGGTAAACTG+AGG + contig240end:12479-12498 MsG0080048185.01.T01:intron 25.0%
! ATAAACAGAGAATTTACTTC+TGG - contig240end:8322-8341 None:intergenic 25.0%
! ATAAATTGGAAATCTTTGAG+TGG - contig240end:9963-9982 None:intergenic 25.0%
! ATAAGAAATTTGTCAAAGCA+CGG - contig240end:8622-8641 None:intergenic 25.0%
! ATAAGTCTGTGTATATAGTT+TGG + contig240end:10979-10998 MsG0080048185.01.T01:intron 25.0%
! ATGTGAATGATTTATCGTAT+GGG + contig240end:19913-19932 MsG0080048185.01.T01:intron 25.0%
! ATTCAGATGGTTTCATAAAT+TGG - contig240end:9977-9996 None:intergenic 25.0%
! ATTCCTAGTTTGATTAATTG+CGG + contig240end:21605-21624 MsG0080048185.01.T01:three_prime_UTR 25.0%
! ATTCGTAGTTTGATTAATTG+TGG + contig240end:17407-17426 MsG0080048185.01.T01:intron 25.0%
! ATTGACATGAGAAAGTTATA+AGG - contig240end:9699-9718 None:intergenic 25.0%
! ATTGTGACTAATATGTCTAT+AGG + contig240end:8881-8900 MsG0080048185.01.T01:intron 25.0%
! ATTGTTAGTTAATGGAGATT+AGG + contig240end:16403-16422 MsG0080048185.01.T01:intron 25.0%
! ATTGTTCTGATTATCTTATC+TGG + contig240end:20724-20743 MsG0080048185.01.T01:intron 25.0%
! CAAATAACTTCATTATCAGA+AGG - contig240end:18927-18946 None:intergenic 25.0%
! CATAAAGAGTTTCAATTCAA+AGG - contig240end:18851-18870 None:intergenic 25.0%
! CATGGATAATCTATTAGAAA+AGG - contig240end:11459-11478 None:intergenic 25.0%
! CTTATATTCATCCATGTTAT+AGG + contig240end:16332-16351 MsG0080048185.01.T01:intron 25.0%
! CTTTGAATTGAAACTCTTTA+TGG + contig240end:18849-18868 MsG0080048185.01.T01:intron 25.0%
! GAAACTTTCTAAACTTTGAA+AGG - contig240end:15868-15887 None:intergenic 25.0%
! GATACTGTGTTGAAATTATA+AGG + contig240end:11295-11314 MsG0080048185.01.T01:intron 25.0%
! GCAAAACGATTATTATTAGA+AGG - contig240end:11678-11697 None:intergenic 25.0%
! GGATCTAATAAGATTAATCA+TGG - contig240end:18476-18495 None:intergenic 25.0%
! GTTTATAGCAAAATCATGTA+TGG + contig240end:18776-18795 MsG0080048185.01.T01:intron 25.0%
! TAAACAGAGAATTTACTTCT+GGG - contig240end:8321-8340 None:intergenic 25.0%
! TAAACCATTATCATATGGAT+TGG + contig240end:9139-9158 MsG0080048185.01.T01:intron 25.0%
! TAAACCCTAATTTCGTAAAT+CGG - contig240end:20366-20385 None:intergenic 25.0%
! TACCCTTTATCAATTATTGA+GGG + contig240end:18115-18134 MsG0080048185.01.T01:intron 25.0%
! TATGCAAGTTATGTTATGAT+TGG + contig240end:18314-18333 MsG0080048185.01.T01:intron 25.0%
! TATGTGAATGATTTATCGTA+TGG + contig240end:19912-19931 MsG0080048185.01.T01:intron 25.0%
! TCAGAGATAAAAAAAAACTC+TGG + contig240end:10638-10657 MsG0080048185.01.T01:intron 25.0%
! TGAATTGAATTGAATTGGTT+TGG + contig240end:21097-21116 MsG0080048185.01.T01:intron 25.0%
! TGCAAAATTTCAACAAAACA+AGG - contig240end:8065-8084 None:intergenic 25.0%
! TGGTTAAATTCATTAAGTTC+AGG - contig240end:12058-12077 None:intergenic 25.0%
! TTAATCAAACTACGAATGAA+CGG - contig240end:17404-17423 None:intergenic 25.0%
! TTACCCTTTATCAATTATTG+AGG + contig240end:18114-18133 MsG0080048185.01.T01:intron 25.0%
! TTAGGATAAGCAATGAATTT+AGG + contig240end:16421-16440 MsG0080048185.01.T01:intron 25.0%
! TTATTAAGACATGTGCAAAA+AGG - contig240end:14253-14272 None:intergenic 25.0%
! TTGAAAGGAAAAAAAAGCAA+CGG + contig240end:12813-12832 MsG0080048185.01.T01:intron 25.0%
! TTGTTCTGATTATCTTATCT+GGG + contig240end:20725-20744 MsG0080048185.01.T01:intron 25.0%
! TTGTTTATCAAGAATGTTGT+TGG - contig240end:14850-14869 None:intergenic 25.0%
! TTTAACGTGACATTTACATT+TGG - contig240end:19685-19704 None:intergenic 25.0%
! TTTGCATTCAAATAAAGACA+AGG + contig240end:11176-11195 MsG0080048185.01.T01:intron 25.0%
!! AACAAATGTTCTGATTTTAG+AGG + contig240end:16445-16464 MsG0080048185.01.T01:intron 25.0%
!! AACTTTCTAAACTTTGAAAG+GGG - contig240end:15866-15885 None:intergenic 25.0%
!! ACAATTTTGCCGTAAAAATA+AGG + contig240end:19010-19029 MsG0080048185.01.T01:intron 25.0%
!! ATTGAATTGATTTAGTTGCT+AGG + contig240end:21572-21591 MsG0080048185.01.T01:three_prime_UTR 25.0%
!! CGTTTAAAATTTCAAGTCTT+AGG + contig240end:9333-9352 MsG0080048185.01.T01:intron 25.0%
!! CTGTTGAAAATTTTCTTTCA+GGG + contig240end:21021-21040 MsG0080048185.01.T01:intron 25.0%
!! GAATGTTTGGTTAATTGTTT+TGG + contig240end:16668-16687 MsG0080048185.01.T01:intron 25.0%
!! GACAATAAACATATCGATTA+TGG - contig240end:18497-18516 None:intergenic 25.0%
!! GATCCTATTTAATGAGTTTT+AGG + contig240end:8105-8124 MsG0080048185.01.T01:intron 25.0%
!! GCATCTATTGATGATTAATT+TGG + contig240end:11950-11969 MsG0080048185.01.T01:intron 25.0%
!! TATTATCATGAGATCCATTT+TGG + contig240end:13798-13817 MsG0080048185.01.T01:intron 25.0%
!! TATTTTCCTTGTCAACAAAT+TGG - contig240end:18434-18453 None:intergenic 25.0%
!! TCTGTTGAAAATTTTCTTTC+AGG + contig240end:21020-21039 MsG0080048185.01.T01:intron 25.0%
!! TTAAAAGTTGGTCTAATGAA+TGG + contig240end:13020-13039 MsG0080048185.01.T01:intron 25.0%
!! TTAAAGGGTTCCATTAATTT+TGG - contig240end:10471-10490 None:intergenic 25.0%
!! TTGAATTGATTTAGTTGCTA+GGG + contig240end:21573-21592 MsG0080048185.01.T01:three_prime_UTR 25.0%
!! TTGTTTGAAGTAATTGTGTT+GGG + contig240end:16885-16904 MsG0080048185.01.T01:intron 25.0%
!! TTTGTTTGAAGTAATTGTGT+TGG + contig240end:16884-16903 MsG0080048185.01.T01:intron 25.0%
!!! AAGAGCATTTGAAATTTACT+TGG - contig240end:19738-19757 None:intergenic 25.0%
!!! ACGTATTGTTTCTATTAATG+GGG - contig240end:20033-20052 None:intergenic 25.0%
!!! ATACGAAACTTTGATTTGAA+AGG - contig240end:20150-20169 None:intergenic 25.0%
!!! ATGGGTTGAATTTTTTTTGA+AGG - contig240end:9809-9828 None:intergenic 25.0%
!!! ATGGTAAGAAAAAGGTATTA+AGG + contig240end:15603-15622 MsG0080048185.01.T01:intron 25.0%
!!! GCTATCTGAATTTTAGTTTT+TGG + contig240end:17445-17464 MsG0080048185.01.T01:intron 25.0%
!!! GTACGTATTGTTTCTATTAA+TGG - contig240end:20035-20054 None:intergenic 25.0%
!!! GTGGTTTTAATTAGAAAGAA+TGG + contig240end:10105-10124 MsG0080048185.01.T01:intron 25.0%
!!! GTTTTAATTAGAAAGAATGG+TGG + contig240end:10108-10127 MsG0080048185.01.T01:intron 25.0%
!!! TACATGATTTTGCTATAAAC+AGG - contig240end:18776-18795 None:intergenic 25.0%
!!! TAGATTGTGATTTCAAGTTA+AGG - contig240end:10797-10816 None:intergenic 25.0%
!!! TGGTAAGAAAAAGGTATTAA+GGG + contig240end:15604-15623 MsG0080048185.01.T01:intron 25.0%
!!! TTGAATTTTTTTTGAAGGTG+TGG - contig240end:9804-9823 None:intergenic 25.0%
!!! TTGGTTGTTTCTGATAATTT+TGG + contig240end:17104-17123 MsG0080048185.01.T01:intron 25.0%
!!! TTGTAGCTTCCTTATTTTTA+CGG - contig240end:19022-19041 None:intergenic 25.0%
!!! TTGTTTTAAACAGTGAGATT+AGG + contig240end:16935-16954 MsG0080048185.01.T01:intron 25.0%
AAAAAAAAAATCGTCTCGTG+TGG - contig240end:12736-12755 None:intergenic 30.0%
AAAAAAAACTCTGGTAGGAT+AGG + contig240end:10647-10666 MsG0080048185.01.T01:intron 30.0%
AAAAACACGAGGAAATAATG+TGG + contig240end:8455-8474 MsG0080048185.01.T01:intron 30.0%
AAAAGAAAAGAAAACGAACC+TGG - contig240end:15935-15954 None:intergenic 30.0%
AAATCACAATCCATAGAATG+AGG + contig240end:9204-9223 MsG0080048185.01.T01:intron 30.0%
AAATTAGATTGCTGAGACAA+TGG - contig240end:10843-10862 None:intergenic 30.0%
AACCCAAAAATCGTTGTTTA+TGG + contig240end:19991-20010 MsG0080048185.01.T01:intron 30.0%
AACTTGTAACGACGTATTAT+AGG - contig240end:12189-12208 None:intergenic 30.0%
AAGATTGGATTCATTTGTGA+TGG - contig240end:12570-12589 None:intergenic 30.0%
AAGCAACTAAAATCAAACCT+TGG - contig240end:20827-20846 None:intergenic 30.0%
AAGCTTGTAATTGTCTATGA+TGG - contig240end:13519-13538 None:intergenic 30.0%
AAGGGCAAACATGTAAAATA+AGG - contig240end:18827-18846 None:intergenic 30.0%
AATCACAATCCATAGAATGA+GGG + contig240end:9205-9224 MsG0080048185.01.T01:intron 30.0%
AATCACCAACATGAGAATAT+GGG - contig240end:8945-8964 None:intergenic 30.0%
AATCGTTAGCAAGAGTTTAA+GGG - contig240end:8171-8190 None:intergenic 30.0%
AATTATTACTCGTTTCTGAG+GGG - contig240end:12006-12025 None:intergenic 30.0%
ACATTCAATAAGTCTCTCAA+TGG + contig240end:15037-15056 MsG0080048185.01.T01:intron 30.0%
AGAAGAAAGCAAAAATTTCC+AGG + contig240end:15914-15933 MsG0080048185.01.T01:intron 30.0%
AGAATGTTTCAACCATACTT+TGG + contig240end:15093-15112 MsG0080048185.01.T01:intron 30.0%
AGAATTATTACTCGTTTCTG+AGG - contig240end:12008-12027 None:intergenic 30.0%
AGATATGACTAGATTGCATT+TGG + contig240end:11034-11053 MsG0080048185.01.T01:intron 30.0%
AGCCATGAAAATGAAGAAAT+GGG + contig240end:15199-15218 MsG0080048185.01.T01:intron 30.0%
AGGTTAAGCTATGATCTTAT+GGG + contig240end:20699-20718 MsG0080048185.01.T01:intron 30.0%
ATACAGTTCTTTCTCATACA+TGG + contig240end:12395-12414 MsG0080048185.01.T01:intron 30.0%
ATAGCATAGCATAATAGACA+CGG - contig240end:18050-18069 None:intergenic 30.0%
ATATACACAGACTTATCAAG+TGG - contig240end:10975-10994 None:intergenic 30.0%
ATATTGAAACCCTCATTCTA+TGG - contig240end:9217-9236 None:intergenic 30.0%
ATCAACTAGATCATTCATTG+TGG - contig240end:14381-14400 None:intergenic 30.0%
ATCAGTTTAGATGACAGATT+TGG + contig240end:17085-17104 MsG0080048185.01.T01:intron 30.0%
ATCCTTCATGCATCATATAA+TGG - contig240end:11264-11283 None:intergenic 30.0%
ATCTCCGATTTACGAAATTA+GGG + contig240end:20359-20378 MsG0080048185.01.T01:intron 30.0%
ATGTCTAATTAAGAACCATG+TGG + contig240end:19872-19891 MsG0080048185.01.T01:intron 30.0%
ATTATATGATGCATGAAGGA+TGG + contig240end:11263-11282 MsG0080048185.01.T01:intron 30.0%
CAATAAGAGATCGTAGTTAA+AGG - contig240end:14338-14357 None:intergenic 30.0%
CATAGAGGTGATAAGAAAAA+TGG + contig240end:18604-18623 MsG0080048185.01.T01:intron 30.0%
CATTATGGTGATTGAATGTT+TGG + contig240end:16655-16674 MsG0080048185.01.T01:intron 30.0%
CCAAATGAAACATCCATTAA+AGG - contig240end:18180-18199 None:intergenic 30.0%
CCACCTAAAACTCATTAAAT+AGG - contig240end:8111-8130 None:intergenic 30.0%
GAAAACTTGAGAGAAACAAT+TGG + contig240end:8568-8587 MsG0080048185.01.T01:intron 30.0%
GAAATAATCCATTCCATGTA+TGG - contig240end:13857-13876 None:intergenic 30.0%
GAAATTAGGGTTTACGAATT+TGG + contig240end:16073-16092 MsG0080048185.01.T01:intron 30.0%
GAATAGTAATCTACATCACA+AGG - contig240end:11926-11945 None:intergenic 30.0%
GAATTATTACTCGTTTCTGA+GGG - contig240end:12007-12026 None:intergenic 30.0%
GAATTTCTCCATCATAAACA+GGG - contig240end:13125-13144 None:intergenic 30.0%
GCTAGAAATACTAGATTAGA+TGG - contig240end:17569-17588 None:intergenic 30.0%
GGTTGTGGTTTCTAATAATT+TGG + contig240end:21311-21330 MsG0080048185.01.T01:intron 30.0%
GTTGATTGTGTTTATGTAGA+TGG + contig240end:16519-16538 MsG0080048185.01.T01:intron 30.0%
GTTTGATTAATTGTGGTGAT+AGG + contig240end:17414-17433 MsG0080048185.01.T01:intron 30.0%
TAAACCAGTTAACAAGTCAT+GGG - contig240end:9827-9846 None:intergenic 30.0%
TAAGAAATTTGTCAAAGCAC+GGG - contig240end:8621-8640 None:intergenic 30.0%
TAATCATGGAGTTCAATTGT+TGG - contig240end:18462-18481 None:intergenic 30.0%
TACACACATACTTAGATACT+TGG + contig240end:19127-19146 MsG0080048185.01.T01:intron 30.0%
TAGCCATGAAAATGAAGAAA+TGG + contig240end:15198-15217 MsG0080048185.01.T01:intron 30.0%
TAGGTTAAGCTATGATCTTA+TGG + contig240end:20698-20717 MsG0080048185.01.T01:intron 30.0%
TAGTCATAAAATTTGCGCAT+TGG + contig240end:14651-14670 MsG0080048185.01.T01:intron 30.0%
TAGTTCTCTTTCCTATAACA+TGG - contig240end:16346-16365 None:intergenic 30.0%
TATAAAATATCTTCCCCACT+GGG - contig240end:19458-19477 None:intergenic 30.0%
TATAAGGATTTAGGTGCAAA+AGG + contig240end:11311-11330 MsG0080048185.01.T01:intron 30.0%
TATACACAGACTTATCAAGT+GGG - contig240end:10974-10993 None:intergenic 30.0%
TCCTTCATGCATCATATAAT+GGG - contig240end:11263-11282 None:intergenic 30.0%
TCGAAATTCATTCGTAAAAG+CGG + contig240end:8641-8660 MsG0080048185.01.T01:intron 30.0%
TCGGTCTTTATATCAGTAAA+TGG + contig240end:19292-19311 MsG0080048185.01.T01:intron 30.0%
TGAACTTACAAACAAGTTCT+AGG - contig240end:11125-11144 None:intergenic 30.0%
TGAATGATTTATGCATTGTG+TGG + contig240end:18953-18972 MsG0080048185.01.T01:intron 30.0%
TGACTAATATGTCTATAGGT+GGG + contig240end:8885-8904 MsG0080048185.01.T01:intron 30.0%
TGGTTTACTTTAATAAGCAC+AGG - contig240end:9126-9145 None:intergenic 30.0%
TGTATGCAGACAACTTTAAA+TGG + contig240end:11717-11736 MsG0080048185.01.T01:intron 30.0%
TGTCTAATTAAGAACCATGT+GGG + contig240end:19873-19892 MsG0080048185.01.T01:intron 30.0%
TTAAACCAGTTAACAAGTCA+TGG - contig240end:9828-9847 None:intergenic 30.0%
TTCCTTATTAGAGCTAGTTA+CGG - contig240end:14964-14983 None:intergenic 30.0%
TTCTTAATTAGACATGCGAA+AGG - contig240end:19867-19886 None:intergenic 30.0%
TTGATACGAAAAACAAAGCT+CGG - contig240end:16006-16025 None:intergenic 30.0%
TTTATATTCTGTCGAGAGTT+CGG - contig240end:17785-17804 None:intergenic 30.0%
TTTGAAGAAAAAAACGAACC+TGG - contig240end:20230-20249 None:intergenic 30.0%
TTTGCATTCAAATAACGACA+AGG + contig240end:9545-9564 MsG0080048185.01.T01:intron 30.0%
TTTGTCGTTATTCTAGATTG+CGG + contig240end:12211-12230 MsG0080048185.01.T01:intron 30.0%
! AATAATAATCGTTTTGCTCG+TGG + contig240end:11681-11700 MsG0080048185.01.T01:intron 30.0%
! AGACCATAAACAACGATTTT+TGG - contig240end:19997-20016 None:intergenic 30.0%
! AGCTTTCATGAGATTCATTT+TGG + contig240end:13534-13553 MsG0080048185.01.T01:intron 30.0%
! AGTTTAACGAGTTTGAGTTA+AGG + contig240end:13200-13219 MsG0080048185.01.T01:intron 30.0%
! ATCTTTTCGTGTGAAAGAAA+AGG + contig240end:11841-11860 MsG0080048185.01.T01:intron 30.0%
! ATTGCATTTGGAATAGAAAC+AGG + contig240end:11046-11065 MsG0080048185.01.T01:intron 30.0%
! CCTTTAATGGATGTTTCATT+TGG + contig240end:18177-18196 MsG0080048185.01.T01:intron 30.0%
! CGGATCTTGAGTAAATTTTT+CGG - contig240end:19618-19637 None:intergenic 30.0%
! CGTGGACATTTTAAATAATG+TGG - contig240end:19826-19845 None:intergenic 30.0%
! GACCATAAACAACGATTTTT+GGG - contig240end:19996-20015 None:intergenic 30.0%
! GATCTTGAGTAAATTTTTCG+GGG - contig240end:19616-19635 None:intergenic 30.0%
! GCAAATTTTATGACTAAGCT+TGG - contig240end:14647-14666 None:intergenic 30.0%
! GGATCTTGAGTAAATTTTTC+GGG - contig240end:19617-19636 None:intergenic 30.0%
! GTTTAACGAGTTTGAGTTAA+GGG + contig240end:13201-13220 MsG0080048185.01.T01:intron 30.0%
! TCTAGTTGTTTAGTTCCTAT+TGG - contig240end:15670-15689 None:intergenic 30.0%
! TGAAACTCTTTATGGCTTTT+AGG + contig240end:18857-18876 MsG0080048185.01.T01:intron 30.0%
! TGAATTGATTTAGTTGCTAG+GGG + contig240end:21574-21593 MsG0080048185.01.T01:three_prime_UTR 30.0%
! TTCCCATTTCTTCATTTTCA+TGG - contig240end:15204-15223 None:intergenic 30.0%
! TTTCATGAGATTCATTTTGG+TGG + contig240end:13537-13556 MsG0080048185.01.T01:intron 30.0%
! TTTTACGGCAAAATTGTGTA+AGG - contig240end:19007-19026 None:intergenic 30.0%
! TTTTTCCAAACTCTCTGAAT+TGG - contig240end:15430-15449 None:intergenic 30.0%
!! AATGTTGTAAACTGGTTTGA+TGG - contig240end:19545-19564 None:intergenic 30.0%
!! ATCTTGAGTAAATTTTTCGG+GGG - contig240end:19615-19634 None:intergenic 30.0%
!! CATAGAATAAAGACTAGTCT+TGG + contig240end:14536-14555 MsG0080048185.01.T01:intron 30.0%
!! CGTATTGTTTCTATTAATGG+GGG - contig240end:20032-20051 None:intergenic 30.0%
!! TAATTTGCTTGCAATGACTT+TGG + contig240end:17472-17491 MsG0080048185.01.T01:intron 30.0%
!! TGCTGATAGTGTTTTGTTAT+TGG + contig240end:17350-17369 MsG0080048185.01.T01:intron 30.0%
!! TTTTGCTATAAACAGGTGAT+TGG - contig240end:18769-18788 None:intergenic 30.0%
!!! CATGTGTTCTTGTTTTTACT+GGG + contig240end:21699-21718 MsG0080048185.01.T01:three_prime_UTR 30.0%
!!! CCTATTTAATGAGTTTTAGG+TGG + contig240end:8108-8127 MsG0080048185.01.T01:intron 30.0%
!!! GGGATTTTTTTTTTCTGAGA+CGG - contig240end:10559-10578 None:intergenic 30.0%
!!! TCATGTGTTCTTGTTTTTAC+TGG + contig240end:21698-21717 MsG0080048185.01.T01:three_prime_UTR 30.0%
AAAAAATGCCAACAGTTGCT+CGG + contig240end:9891-9910 MsG0080048185.01.T01:intron 35.0%
AAAAATCAACGCCTTCAAAG+AGG - contig240end:13357-13376 None:intergenic 35.0%
AAAATCAACGCCTTCAAAGA+GGG - contig240end:13356-13375 None:intergenic 35.0%
AACAAATTGGCACATCCAAT+CGG - contig240end:18421-18440 None:intergenic 35.0%
AACTTCCTTTCTCACTTCAA+TGG - contig240end:10595-10614 None:intergenic 35.0%
AAGTAAATATCTCCGGAGTT+TGG - contig240end:14312-14331 None:intergenic 35.0%
AAGTGCATAACTTTGACATG+AGG - contig240end:19519-19538 None:intergenic 35.0%
AATGGAGAAGAGTTGAGTAA+AGG + contig240end:8527-8546 MsG0080048185.01.T01:intron 35.0%
AATGTAAATGGGAGTTGTCT+TGG - contig240end:14988-15007 None:intergenic 35.0%
AATTAAAGGTTACAACGTGG+TGG - contig240end:15367-15386 None:intergenic 35.0%
AATTGCACACTCGAAAACAA+AGG - contig240end:19714-19733 None:intergenic 35.0%
ACAACTTTGAATCTTGACAC+TGG - contig240end:10420-10439 None:intergenic 35.0%
ACATATGTTACGATTCTTCC+TGG + contig240end:8734-8753 MsG0080048185.01.T01:intron 35.0%
ACCAAGAAGTCAAACTTGAA+AGG + contig240end:12798-12817 MsG0080048185.01.T01:intron 35.0%
ACCCATTATATGATGCATGA+AGG + contig240end:11259-11278 MsG0080048185.01.T01:intron 35.0%
ACCTAAGTAGAACGAAAAGA+AGG - contig240end:17754-17773 None:intergenic 35.0%
ACGAATTCGCTGTATGTATT+TGG + contig240end:20385-20404 MsG0080048185.01.T01:intron 35.0%
ACTAGATCATTCATTGTGGA+TGG - contig240end:14377-14396 None:intergenic 35.0%
ACTGGAAGTTGCTTAAGATT+TGG - contig240end:10402-10421 None:intergenic 35.0%
ACTTCCTTTCTCACTTCAAT+GGG - contig240end:10594-10613 None:intergenic 35.0%
AGAAAGGTTCATCTTGTCTT+TGG + contig240end:7752-7771 MsG0080048185.01.T01:five_prime_UTR 35.0%
AGAAATTGAAAACTTGGCCT+GGG + contig240end:10310-10329 MsG0080048185.01.T01:intron 35.0%
AGAGTTTCAATTCAAAGGCA+AGG - contig240end:18846-18865 None:intergenic 35.0%
AGATATCTGTTGTCTGGATT+AGG + contig240end:8417-8436 MsG0080048185.01.T01:intron 35.0%
AGCTTATACTTGCAATGTGA+TGG + contig240end:8210-8229 MsG0080048185.01.T01:intron 35.0%
AGTAAATATCTCCGGAGTTT+GGG - contig240end:14311-14330 None:intergenic 35.0%
AGTGTCATCCTCAATGTAAA+TGG - contig240end:15000-15019 None:intergenic 35.0%
AGTTGTCCATTACAATCCAA+AGG - contig240end:17538-17557 None:intergenic 35.0%
ATAGCATAATAGACACGGAA+TGG - contig240end:18045-18064 None:intergenic 35.0%
ATGTAGTTTAAACCCATCTC+AGG - contig240end:9496-9515 None:intergenic 35.0%
ATTAGCATTCCGTACATACA+TGG - contig240end:13469-13488 None:intergenic 35.0%
ATTCATTGTGGATGGAACAA+AGG - contig240end:14369-14388 None:intergenic 35.0%
ATTGGATTCATTTGTGATGG+TGG - contig240end:12567-12586 None:intergenic 35.0%
ATTTGAAAGGCGAAAAGTGA+AGG - contig240end:20137-20156 None:intergenic 35.0%
CAAGCTTAAATTATCATCCC+AGG - contig240end:9673-9692 None:intergenic 35.0%
CAATCGTTAGCAAGAGTTTA+AGG - contig240end:8172-8191 None:intergenic 35.0%
CATATGTTACGATTCTTCCT+GGG + contig240end:8735-8754 MsG0080048185.01.T01:intron 35.0%
CATCTCCGATTTACGAAATT+AGG + contig240end:20358-20377 MsG0080048185.01.T01:intron 35.0%
CATGTATGGATAACATGCAA+GGG - contig240end:13579-13598 None:intergenic 35.0%
CATGTTATCCATACATGGAA+TGG + contig240end:13582-13601 MsG0080048185.01.T01:intron 35.0%
CCAATTTGCATCAATTCAGA+TGG - contig240end:9990-10009 None:intergenic 35.0%
CCACGTTGTAACCTTTAATT+AGG + contig240end:15367-15386 MsG0080048185.01.T01:intron 35.0%
CCATCTGAATTGATGCAAAT+TGG + contig240end:9987-10006 MsG0080048185.01.T01:intron 35.0%
CCTAATTAAAGGTTACAACG+TGG - contig240end:15370-15389 None:intergenic 35.0%
CGAAAAGGTGACATGTTTAA+TGG - contig240end:19157-19176 None:intergenic 35.0%
CGAACCAATCCATATGATAA+TGG - contig240end:9146-9165 None:intergenic 35.0%
CTAGATTAGATGGCAACAAA+AGG - contig240end:21759-21778 None:intergenic 35.0%
CTTATCTGGGTTTATGTAGA+TGG + contig240end:20738-20757 MsG0080048185.01.T01:intron 35.0%
CTTGTTGAGGATGAATTGAA+GGG - contig240end:10161-10180 None:intergenic 35.0%
CTTTCTCAGTTACGATCTAA+CGG - contig240end:20057-20076 None:intergenic 35.0%
GAAACTCGTTAGCTGAAATT+TGG - contig240end:20181-20200 None:intergenic 35.0%
GAATCAAAACTGCATAGATG+TGG + contig240end:14738-14757 MsG0080048185.01.T01:intron 35.0%
GAATCACCAACATGAGAATA+TGG - contig240end:8946-8965 None:intergenic 35.0%
GAGATAATCCATTCCATGTA+TGG - contig240end:13593-13612 None:intergenic 35.0%
GAGTTTCAATTCAAAGGCAA+GGG - contig240end:18845-18864 None:intergenic 35.0%
GATGATTCAAAAACTCACCT+TGG - contig240end:16608-16627 None:intergenic 35.0%
GATTGTATTAACCTCGTTTG+TGG - contig240end:14779-14798 None:intergenic 35.0%
GCAGACAACTTTAAATGGAA+GGG + contig240end:11722-11741 MsG0080048185.01.T01:intron 35.0%
GGAATTTCTCCATCATAAAC+AGG - contig240end:13126-13145 None:intergenic 35.0%
GTAGAACGAAAAGAAGGAAT+TGG - contig240end:17748-17767 None:intergenic 35.0%
GTATAAAATATCTTCCCCAC+TGG - contig240end:19459-19478 None:intergenic 35.0%
GTGACTAATATGTCTATAGG+TGG + contig240end:8884-8903 MsG0080048185.01.T01:intron 35.0%
GTGTCATCCTCAATGTAAAT+GGG - contig240end:14999-15018 None:intergenic 35.0%
GTGTTAAATATGGCAACCAA+GGG - contig240end:13057-13076 None:intergenic 35.0%
GTGTTTAATCCCAATTGAGA+CGG - contig240end:17968-17987 None:intergenic 35.0%
GTTGCAAATTTGAACTTGAG+TGG + contig240end:10073-10092 MsG0080048185.01.T01:intron 35.0%
TAGCATAATAGACACGGAAT+GGG - contig240end:18044-18063 None:intergenic 35.0%
TCAAAAGAGAGGATGCAAAA+AGG + contig240end:12844-12863 MsG0080048185.01.T01:intron 35.0%
TCAAATCAACACATACATCG+TGG - contig240end:19844-19863 None:intergenic 35.0%
TCAAATGAAACCCTCTTTGA+AGG + contig240end:13343-13362 MsG0080048185.01.T01:intron 35.0%
TCACCGCAATTAATCAAACT+AGG - contig240end:21611-21630 None:intergenic 35.0%
TCTCACAACTTTCAGTCAAT+AGG - contig240end:10249-10268 None:intergenic 35.0%
TCTTACTATGCATTCTCCAT+GGG - contig240end:18362-18381 None:intergenic 35.0%
TCTTGTTGAGGATGAATTGA+AGG - contig240end:10162-10181 None:intergenic 35.0%
TGAAATTGCTCAAGACTTCA+AGG + contig240end:17017-17036 MsG0080048185.01.T01:CDS 35.0%
TGCAGACAACTTTAAATGGA+AGG + contig240end:11721-11740 MsG0080048185.01.T01:intron 35.0%
TGCATATGAAACAAAAGCTG+AGG + contig240end:9637-9656 MsG0080048185.01.T01:intron 35.0%
TGTAAGAGAAGTTTAGGAGT+TGG - contig240end:18903-18922 None:intergenic 35.0%
TGTGCTTACTTTAACTCCTA+AGG - contig240end:13392-13411 None:intergenic 35.0%
TGTGTTAAATATGGCAACCA+AGG - contig240end:13058-13077 None:intergenic 35.0%
TTAGCATTCCGTACATACAT+GGG - contig240end:13468-13487 None:intergenic 35.0%
TTAGGTTTCGATAATTCACG+TGG + contig240end:16146-16165 MsG0080048185.01.T01:intron 35.0%
TTCAAAGAGGGTTTCATTTG+AGG - contig240end:13344-13363 None:intergenic 35.0%
TTCAACCATACTTTGGATGT+TGG + contig240end:15100-15119 MsG0080048185.01.T01:intron 35.0%
TTCACTAGATATCTGTTGTC+TGG + contig240end:8411-8430 MsG0080048185.01.T01:intron 35.0%
TTCATTGTGGATGGAACAAA+GGG - contig240end:14368-14387 None:intergenic 35.0%
TTCTGTTGAAGTTCTTGTTG+AGG - contig240end:10174-10193 None:intergenic 35.0%
TTCTTACTATGCATTCTCCA+TGG - contig240end:18363-18382 None:intergenic 35.0%
TTCTTCTCTTTCCTAAAACG+TGG - contig240end:20587-20606 None:intergenic 35.0%
TTTAAACTACATCCAGGACT+AGG + contig240end:9504-9523 MsG0080048185.01.T01:intron 35.0%
TTTGTCACGAAACAGTTTGA+TGG + contig240end:12525-12544 MsG0080048185.01.T01:intron 35.0%
! AGACTTTGTTTCTCAGACTT+TGG + contig240end:10875-10894 MsG0080048185.01.T01:intron 35.0%
! AGCTACTTTCTTAAAACACG+CGG + contig240end:17618-17637 MsG0080048185.01.T01:intron 35.0%
! AGCTAGTTGGTTTAGCTATA+TGG - contig240end:13147-13166 None:intergenic 35.0%
! AGCTTCTCTATTTTCACGTT+GGG - contig240end:15407-15426 None:intergenic 35.0%
! ATATCTTGTTGGTCTCTTTG+AGG + contig240end:21402-21421 MsG0080048185.01.T01:CDS 35.0%
! ATATCTTGTTGGTCTGTTTG+AGG + contig240end:17198-17217 MsG0080048185.01.T01:CDS 35.0%
! CAATCATAAGTAGAGCACTT+TGG - contig240end:9092-9111 None:intergenic 35.0%
! CATGTTCAAACGCTTTTGTT+TGG - contig240end:12997-13016 None:intergenic 35.0%
! CTGCATCTAGAACATAAGTT+GGG + contig240end:11147-11166 MsG0080048185.01.T01:intron 35.0%
! GAATGAGTATGACTGACTTA+AGG - contig240end:15240-15259 None:intergenic 35.0%
! GATGGATTTCTTTGATCTGA+TGG + contig240end:10715-10734 MsG0080048185.01.T01:intron 35.0%
! GTTACATTCATCCACGTTTT+AGG + contig240end:20573-20592 MsG0080048185.01.T01:intron 35.0%
! TATCATGAGATCCATTTTGG+TGG + contig240end:13801-13820 MsG0080048185.01.T01:intron 35.0%
! TCCTTCTTTTCGTTCTACTT+AGG + contig240end:17750-17769 MsG0080048185.01.T01:intron 35.0%
! TGATGATTAATTTGGACCCT+AGG + contig240end:11958-11977 MsG0080048185.01.T01:intron 35.0%
! TGCATCTAGAACATAAGTTG+GGG + contig240end:11148-11167 MsG0080048185.01.T01:intron 35.0%
! TGTTTTCCTTCAATCTCGAA+TGG - contig240end:15068-15087 None:intergenic 35.0%
! TTCAATGGGTTCTGTTAAAG+CGG - contig240end:10580-10599 None:intergenic 35.0%
! TTTTCCAACTTTCAAGCGTT+AGG + contig240end:10932-10951 MsG0080048185.01.T01:intron 35.0%
!! AAAATAAAAAGAGGGTGCCA+TGG - contig240end:19333-19352 None:intergenic 35.0%
!! AAATAAAAAGAGGGTGCCAT+GGG - contig240end:19332-19351 None:intergenic 35.0%
!! AAGTTGAGTTGGGTCAATTT+AGG - contig240end:14222-14241 None:intergenic 35.0%
!! AATTTCGCTTTAGAAACACG+CGG + contig240end:17685-17704 MsG0080048185.01.T01:intron 35.0%
!! ACTCTCTGAATTTGAGTTGA+AGG + contig240end:18388-18407 MsG0080048185.01.T01:intron 35.0%
!! ATATAGTTTGGTGCATGAGA+TGG + contig240end:10991-11010 MsG0080048185.01.T01:intron 35.0%
!! ATGCAAATTGGCTTTGTGTT+TGG + contig240end:9999-10018 MsG0080048185.01.T01:intron 35.0%
!! GACTTGTTAACTGGTTTAAC+CGG + contig240end:9829-9848 MsG0080048185.01.T01:intron 35.0%
!! GTTGGATTTTGATACTGAAG+AGG + contig240end:8969-8988 MsG0080048185.01.T01:CDS 35.0%
!! GTTTTCTCGGTTTGAATGAA+CGG - contig240end:15731-15750 None:intergenic 35.0%
!! TCCTTTCAAGTTTGACTTCT+TGG - contig240end:12802-12821 None:intergenic 35.0%
!! TGGTTGTTTCTGTTTCCTTT+AGG + contig240end:16688-16707 MsG0080048185.01.T01:intron 35.0%
!! TTAGAAAGAATGGTGGATAG+TGG + contig240end:10115-10134 MsG0080048185.01.T01:intron 35.0%
!!! CACTTTTTGGAATCAACAGA+AGG - contig240end:10512-10531 None:intergenic 35.0%
!!! CTAAACCAACTAGCTTGTTT+TGG + contig240end:13152-13171 MsG0080048185.01.T01:intron 35.0%
!!! TCCTATTGGTTGTTTTTACG+CGG - contig240end:15656-15675 None:intergenic 35.0%
!!! TCGTTGATCTTGTGTTGTTT+TGG + contig240end:16306-16325 MsG0080048185.01.T01:intron 35.0%
!!! TGATGGGAATTTTGATTCTG+CGG - contig240end:7787-7806 None:intergenic 35.0%
AAACCAACTCGCTCATTGTT+AGG + contig240end:14156-14175 MsG0080048185.01.T01:intron 40.0%
AACACATTTGTAGCTTCCCA+TGG + contig240end:18343-18362 MsG0080048185.01.T01:intron 40.0%
AACCATACTTTGGATGTTGG+AGG + contig240end:15103-15122 MsG0080048185.01.T01:intron 40.0%
AAGCGAGAGGAGTTTAATTG+TGG + contig240end:12243-12262 MsG0080048185.01.T01:intron 40.0%
AAGCTCCAATTCAGAGAGTT+TGG + contig240end:15422-15441 MsG0080048185.01.T01:intron 40.0%
AAGGAATTTGCAGAGAGACA+TGG + contig240end:8997-9016 MsG0080048185.01.T01:CDS 40.0%
AATAAAGACAAGGCAGACCA+TGG + contig240end:11186-11205 MsG0080048185.01.T01:intron 40.0%
AATGCAAGAAACGTGCAAAG+TGG + contig240end:18533-18552 MsG0080048185.01.T01:intron 40.0%
AATTTGCAGAGAGACATGGT+TGG + contig240end:9001-9020 MsG0080048185.01.T01:CDS 40.0%
ACATGGCAATTATTCTTCCC+TGG + contig240end:12412-12431 MsG0080048185.01.T01:intron 40.0%
ACCGCGTAAAAACAACCAAT+AGG + contig240end:15652-15671 MsG0080048185.01.T01:intron 40.0%
ACCTTTAATTAGGCGTCTTG+AGG + contig240end:15377-15396 MsG0080048185.01.T01:intron 40.0%
ACTTCTTGGTTTCTTGTACG+AGG - contig240end:12788-12807 None:intergenic 40.0%
AGAACCCATTGAAGTGAGAA+AGG + contig240end:10587-10606 MsG0080048185.01.T01:intron 40.0%
AGATATGACCAGATTGCATC+TGG + contig240end:9435-9454 MsG0080048185.01.T01:intron 40.0%
AGTGAGAAAGGAAGTTTGAC+TGG + contig240end:10599-10618 MsG0080048185.01.T01:intron 40.0%
ATATAATCGCGGAAGTTCCT+AGG - contig240end:11978-11997 None:intergenic 40.0%
ATGTCTCTCTGCAAATTCCT+TGG - contig240end:8998-9017 None:intergenic 40.0%
ATTTGCAGAGAGACATGGTT+GGG + contig240end:9002-9021 MsG0080048185.01.T01:CDS 40.0%
CAAATGGTTGATCTTGTTGC+AGG + contig240end:11528-11547 MsG0080048185.01.T01:intron 40.0%
CAGAAATTGAAAACTTGGCC+TGG + contig240end:10309-10328 MsG0080048185.01.T01:intron 40.0%
CAGTTCATTTGCCACCAAAA+TGG - contig240end:13551-13570 None:intergenic 40.0%
CATCTAAACAGCACCAAACA+CGG - contig240end:17324-17343 None:intergenic 40.0%
CATGAGATCCCATGTATGTA+CGG + contig240end:13457-13476 MsG0080048185.01.T01:intron 40.0%
CATGCTTAATGAAGCTGAGT+TGG - contig240end:13102-13121 None:intergenic 40.0%
CATTACATTTCCTGCACATG+TGG + contig240end:8682-8701 MsG0080048185.01.T01:intron 40.0%
CCATGTATGGATAACATGCA+AGG - contig240end:13580-13599 None:intergenic 40.0%
CCTTCATAATGTTACCTCGA+CGG - contig240end:14609-14628 None:intergenic 40.0%
CCTTGCATGTTATCCATACA+TGG + contig240end:13577-13596 MsG0080048185.01.T01:intron 40.0%
CGTGAAAACAAACACACACT+TGG + contig240end:15472-15491 MsG0080048185.01.T01:intron 40.0%
CTACATCACAAGGAAAGCTA+AGG - contig240end:11916-11935 None:intergenic 40.0%
CTTAAGATTTGGCAAGAACG+TGG - contig240end:10391-10410 None:intergenic 40.0%
CTTATTAGAGCTAGTTACGG+TGG - contig240end:14961-14980 None:intergenic 40.0%
CTTTCTCTGTTAGGATCTGA+CGG - contig240end:15774-15793 None:intergenic 40.0%
GAAATTGAAAACTTGGCCTG+GGG + contig240end:10311-10330 MsG0080048185.01.T01:intron 40.0%
GAAGCAATTGAAGCTCTGTT+AGG + contig240end:20604-20623 MsG0080048185.01.T01:intron 40.0%
GACAACTCCCATTTACATTG+AGG + contig240end:14989-15008 MsG0080048185.01.T01:intron 40.0%
GATGTTCAAACCTTCAGCAA+CGG - contig240end:11571-11590 None:intergenic 40.0%
GATGTTCGACATCGTTTGAT+GGG - contig240end:7803-7822 None:intergenic 40.0%
GCAAATCTTAGGATGTTCAG+AGG + contig240end:14578-14597 MsG0080048185.01.T01:intron 40.0%
GCGGATATATATTAAGCGAG+AGG + contig240end:12230-12249 MsG0080048185.01.T01:intron 40.0%
GCTTTCTTCTTCTTCTCTTC+AGG - contig240end:15904-15923 None:intergenic 40.0%
GGAACAAAAACGAACGAGAA+AGG + contig240end:7736-7755 MsG0080048185.01.T01:five_prime_UTR 40.0%
GGATTAGGATTCTCTCATGT+GGG + contig240end:8432-8451 MsG0080048185.01.T01:intron 40.0%
GGCGTATATATATAGCGTGT+CGG - contig240end:15833-15852 None:intergenic 40.0%
GGCGTATATATATAGCGTGT+TGG - contig240end:15833-15852 None:intergenic 40.0%
GGGCATCTCTAAGTAGTTTA+TGG + contig240end:8755-8774 MsG0080048185.01.T01:intron 40.0%
GTGAGAAAGGAAGTTTGACT+GGG + contig240end:10600-10619 MsG0080048185.01.T01:intron 40.0%
GTTCATGATCAGTGTAGTCA+AGG + contig240end:21290-21309 MsG0080048185.01.T01:intron 40.0%
GTTTCAGCTGTGCAAATCTT+AGG + contig240end:14567-14586 MsG0080048185.01.T01:intron 40.0%
TAAACTACTTAGAGATGCCC+AGG - contig240end:8755-8774 None:intergenic 40.0%
TAAATATGGCAACCAAGGGA+GGG - contig240end:13053-13072 None:intergenic 40.0%
TAAATGCAAGTGTCTCTTGC+TGG - contig240end:12078-12097 None:intergenic 40.0%
TAACCACGGTTAGCATATCA+TGG - contig240end:11477-11496 None:intergenic 40.0%
TAACCTAACAATGAGCGAGT+TGG - contig240end:14162-14181 None:intergenic 40.0%
TAACTTTGACATGAGGTACG+CGG - contig240end:19512-19531 None:intergenic 40.0%
TAAGCATGCCCTGTTTATGA+TGG + contig240end:13114-13133 MsG0080048185.01.T01:intron 40.0%
TAATAGTAACTCGCTTGGCA+TGG - contig240end:17243-17262 None:intergenic 40.0%
TAGGTACATGCAGCCTTTAA+TGG + contig240end:18164-18183 MsG0080048185.01.T01:intron 40.0%
TAGTTGTCTAGACCCATTTC+AGG - contig240end:11089-11108 None:intergenic 40.0%
TATAATCGCGGAAGTTCCTA+GGG - contig240end:11977-11996 None:intergenic 40.0%
TATACTTGCAATGTGATGGC+AGG + contig240end:8214-8233 MsG0080048185.01.T01:intron 40.0%
TATCCATGATATGCTAACCG+TGG + contig240end:11471-11490 MsG0080048185.01.T01:intron 40.0%
TATCTGTTACAGATGCAGTC+TGG - contig240end:9420-9439 None:intergenic 40.0%
TATCTTTGACATGAGGTACG+CGG - contig240end:19415-19434 None:intergenic 40.0%
TCGAAAATTTCCACATGTGC+AGG - contig240end:8695-8714 None:intergenic 40.0%
TCGAGGTAACATTATGAAGG+AGG + contig240end:14609-14628 MsG0080048185.01.T01:intron 40.0%
TGAAATTGCTCAGGACTTCA+AGG + contig240end:21229-21248 MsG0080048185.01.T01:CDS 40.0%
TGAACTTGAGTGGTTGTTGA+TGG + contig240end:10083-10102 MsG0080048185.01.T01:intron 40.0%
TGAGAAAGGAAGTTTGACTG+GGG + contig240end:10601-10620 MsG0080048185.01.T01:intron 40.0%
TGCACATAATGAACCCTTCA+CGG + contig240end:15275-15294 MsG0080048185.01.T01:intron 40.0%
TGGAAAAACGCGTGTTTGAT+GGG + contig240end:15442-15461 MsG0080048185.01.T01:intron 40.0%
TGTCCATTACAATCCAAAGG+TGG - contig240end:17535-17554 None:intergenic 40.0%
TGTTGCCAAAACAAGCTAGT+TGG - contig240end:13160-13179 None:intergenic 40.0%
TTAAATATGGCAACCAAGGG+AGG - contig240end:13054-13073 None:intergenic 40.0%
TTCTTAACTCCACCAGTAGT+GGG - contig240end:16731-16750 None:intergenic 40.0%
TTCTTAACTCCACCAGTAGT+TGG - contig240end:16731-16750 None:intergenic 40.0%
TTGAGTGGCTTAAGAGTCTA+AGG - contig240end:9948-9967 None:intergenic 40.0%
TTGGAAAAACGCGTGTTTGA+TGG + contig240end:15441-15460 MsG0080048185.01.T01:intron 40.0%
TTGGAAAGAAGCTTGTGACA+GGG - contig240end:10452-10471 None:intergenic 40.0%
TTGTCAAAGCACGGGATATA+TGG - contig240end:8613-8632 None:intergenic 40.0%
TTTCTTAACTCCACCAGTAG+TGG - contig240end:16732-16751 None:intergenic 40.0%
TTTGAAAGGGGAATACGTGA+AGG - contig240end:15854-15873 None:intergenic 40.0%
TTTGGAAAGAAGCTTGTGAC+AGG - contig240end:10453-10472 None:intergenic 40.0%
! AATGTTGTTGGCTAACGAGA+TGG - contig240end:14838-14857 None:intergenic 40.0%
! AGGATGTTGACAAGTTGAGT+TGG - contig240end:14233-14252 None:intergenic 40.0%
! ATCCTAACAGAGAAAGCACA+CGG + contig240end:15778-15797 MsG0080048185.01.T01:intron 40.0%
! ATCGTAACTGAGAAAGCACA+CGG + contig240end:20061-20080 MsG0080048185.01.T01:intron 40.0%
! ATCTGGAATAGAAACAGACG+AGG + contig240end:9459-9478 MsG0080048185.01.T01:intron 40.0%
! ATTTCCAGCTTCTGTGCTTT+TGG + contig240end:20277-20296 MsG0080048185.01.T01:intron 40.0%
! ATTTGGAATAGAAACAGGCG+GGG + contig240end:11051-11070 MsG0080048185.01.T01:intron 40.0%
! CATTTGGAATAGAAACAGGC+GGG + contig240end:11050-11069 MsG0080048185.01.T01:intron 40.0%
! GAAGGGTGTAAGAGAAGTTT+AGG - contig240end:18909-18928 None:intergenic 40.0%
! GAGCTTCTCTATTTTCACGT+TGG - contig240end:15408-15427 None:intergenic 40.0%
! GAGTATGACTGACTTAAGGT+TGG - contig240end:15236-15255 None:intergenic 40.0%
! GATGGGTTTAAACTACATCC+AGG + contig240end:9498-9517 MsG0080048185.01.T01:intron 40.0%
! GCATCTAGAACATAAGTTGG+GGG + contig240end:11149-11168 MsG0080048185.01.T01:intron 40.0%
! GCATTTGGAATAGAAACAGG+CGG + contig240end:11049-11068 MsG0080048185.01.T01:intron 40.0%
! GCTGCATCTAGAACATAAGT+TGG + contig240end:11146-11165 MsG0080048185.01.T01:intron 40.0%
! GGATGTTGACAAGTTGAGTT+GGG - contig240end:14232-14251 None:intergenic 40.0%
! TCAATGGGTTCTGTTAAAGC+GGG - contig240end:10579-10598 None:intergenic 40.0%
! TCATAAGTAGAGCACTTTGG+AGG - contig240end:9089-9108 None:intergenic 40.0%
! TCTGGAATAGAAACAGACGA+GGG + contig240end:9460-9479 MsG0080048185.01.T01:intron 40.0%
! TGGATTAGGATTCTCTCATG+TGG + contig240end:8431-8450 MsG0080048185.01.T01:intron 40.0%
! TGTTAACTGGTTTAACCGGT+TGG + contig240end:9833-9852 MsG0080048185.01.T01:intron 40.0%
!! AAAAAGGGTACCGTCTCAAT+TGG + contig240end:17955-17974 MsG0080048185.01.T01:intron 40.0%
!! AAAAGGGTACCGTCTCAATT+GGG + contig240end:17956-17975 MsG0080048185.01.T01:intron 40.0%
!! AATAAAAAGAGGGTGCCATG+GGG - contig240end:19331-19350 None:intergenic 40.0%
!! CACCGTAACTAGCTCTAATA+AGG + contig240end:14959-14978 MsG0080048185.01.T01:intron 40.0%
!! GATGTGCCAATTTGTTGACA+AGG + contig240end:18425-18444 MsG0080048185.01.T01:intron 40.0%
!! GGATTTTGATACTGAAGAGG+CGG + contig240end:8972-8991 MsG0080048185.01.T01:CDS 40.0%
!! GGTTGGGCTTAATCACTTTT+TGG - contig240end:10525-10544 None:intergenic 40.0%
!! GTGTTTGGTGCTGTTTAGAT+GGG + contig240end:17323-17342 MsG0080048185.01.T01:intron 40.0%
!! TCAACCCATGACTTGTTAAC+TGG + contig240end:9820-9839 MsG0080048185.01.T01:intron 40.0%
!! TGACTTAAGGTTGGTGTGAA+GGG - contig240end:15227-15246 None:intergenic 40.0%
!! TTACAAACAAGTTCTAGGCC+TGG - contig240end:11120-11139 None:intergenic 40.0%
!!! AACAATGAGCGAGTTGGTTT+TGG - contig240end:14156-14175 None:intergenic 40.0%
!!! AGCTTGTTTTGGCAACATCA+AGG + contig240end:13163-13182 MsG0080048185.01.T01:intron 40.0%
!!! CAACTGTTGGCATTTTTTCC+AGG - contig240end:9889-9908 None:intergenic 40.0%
!!! GCTTTTGGTGCTGTTTAGAT+GGG + contig240end:21527-21546 MsG0080048185.01.T01:three_prime_UTR 40.0%
!!! TGCTTTTGGTGCTGTTTAGA+TGG + contig240end:21526-21545 MsG0080048185.01.T01:three_prime_UTR 40.0%
!!! TTGGTTGTTTTTACGCGGTA+CGG - contig240end:15651-15670 None:intergenic 40.0%
!!! TTTTTTCTGAGACGGATCTG+TGG - contig240end:10551-10570 None:intergenic 40.0%
AAACACGCGGATTTCACTTC+TGG + contig240end:17698-17717 MsG0080048185.01.T01:intron 45.0%
AAATATGGCAACCAAGGGAG+GGG - contig240end:13052-13071 None:intergenic 45.0%
AACATGAGAATATGGGTCCC+CGG - contig240end:8938-8957 None:intergenic 45.0%
AACTTTGACATGAGGTACGC+GGG - contig240end:19511-19530 None:intergenic 45.0%
AAGCAGATTAGGATCGTCGT+TGG - contig240end:13437-13456 None:intergenic 45.0%
AAGGAAGCAACTTGCAACCA+AGG + contig240end:20807-20826 MsG0080048185.01.T01:CDS 45.0%
ACAAGAACACCTTCGCAGAA+GGG + contig240end:7939-7958 MsG0080048185.01.T01:CDS 45.0%
ACCCAAAAAAAGGACCCAGT+GGG + contig240end:19380-19399 MsG0080048185.01.T01:intron 45.0%
ACTCGATAGCTTCCAAGATC+TGG + contig240end:12961-12980 MsG0080048185.01.T01:intron 45.0%
ACTGCTACTCAACAAGGATC+TGG + contig240end:8260-8279 MsG0080048185.01.T01:CDS 45.0%
AGCAGATTAGGATCGTCGTT+GGG - contig240end:13436-13455 None:intergenic 45.0%
AGGCACAATGAAGTGGTGAA+AGG - contig240end:11646-11665 None:intergenic 45.0%
AGGTGGGAAAATCCACTGAT+GGG + contig240end:8901-8920 MsG0080048185.01.T01:intron 45.0%
ATAGATGTGGAACGACATGG+GGG + contig240end:14751-14770 MsG0080048185.01.T01:intron 45.0%
ATCCGTGTGCTTTCTCTGTT+AGG - contig240end:15783-15802 None:intergenic 45.0%
ATCTTTGACATGAGGTACGC+GGG - contig240end:19414-19433 None:intergenic 45.0%
ATGAAGCAGATGCAGCACAA+AGG - contig240end:12613-12632 None:intergenic 45.0%
ATGTACCTAGAGTTGGGTCT+GGG - contig240end:18153-18172 None:intergenic 45.0%
CAAACAGCTCGTAAGTCAAC+CGG + contig240end:20772-20791 MsG0080048185.01.T01:CDS 45.0%
CAAACTGCTCGTAAGTCTAC+TGG + contig240end:16553-16572 MsG0080048185.01.T01:CDS 45.0%
CAAAGTAGTGCTCGAAACAG+TGG - contig240end:19641-19660 None:intergenic 45.0%
CAACAAGGATCTGGGAATGT+TGG + contig240end:8269-8288 MsG0080048185.01.T01:CDS 45.0%
CAATTTCACGAACCAACCTC+TGG - contig240end:17005-17024 None:intergenic 45.0%
CACAAGGAAAGCTAAGGCAA+CGG - contig240end:11910-11929 None:intergenic 45.0%
CACCTCCAACATCCAAAGTA+TGG - contig240end:15108-15127 None:intergenic 45.0%
CAGCCACCTTTGGATTGTAA+TGG + contig240end:17529-17548 MsG0080048185.01.T01:intron 45.0%
CATAGATGTGGAACGACATG+GGG + contig240end:14750-14769 MsG0080048185.01.T01:intron 45.0%
CATCACTTTCACTTCCCACA+TGG - contig240end:19890-19909 None:intergenic 45.0%
CCAGGACTAGGACATTAGTT+GGG + contig240end:9516-9535 MsG0080048185.01.T01:intron 45.0%
CCGTCGAGGTAACATTATGA+AGG + contig240end:14606-14625 MsG0080048185.01.T01:intron 45.0%
CGACAAGGTAGAACATGTGT+TGG + contig240end:9560-9579 MsG0080048185.01.T01:intron 45.0%
CGATAGACATGGCCTGAAAT+GGG + contig240end:11074-11093 MsG0080048185.01.T01:intron 45.0%
CGGTGAAACACTCAAAAGAG+AGG + contig240end:12833-12852 MsG0080048185.01.T01:intron 45.0%
CGGTGTCTTTAGTCATCCAT+GGG + contig240end:9911-9930 MsG0080048185.01.T01:intron 45.0%
CTAGGACATTAGTTGGGAGT+TGG + contig240end:9522-9541 MsG0080048185.01.T01:intron 45.0%
CTGCTACTCAACAAGGATCT+GGG + contig240end:8261-8280 MsG0080048185.01.T01:CDS 45.0%
GACTAAGCTTGGAGACTCAT+TGG - contig240end:14636-14655 None:intergenic 45.0%
GACTTAGCTCATCTGCATCT+AGG + contig240end:9588-9607 MsG0080048185.01.T01:intron 45.0%
GAGGATGCAAAAAGGAACGA+AGG + contig240end:12852-12871 MsG0080048185.01.T01:intron 45.0%
GAGGGGACTGAATATAATCG+CGG - contig240end:11989-12008 None:intergenic 45.0%
GATCAGTGTAGTCAAGGTTG+TGG + contig240end:21296-21315 MsG0080048185.01.T01:intron 45.0%
GATCTGGGAATGTTGGAAGA+TGG + contig240end:8276-8295 MsG0080048185.01.T01:CDS 45.0%
GCAAGAACGTGGCTTATTGA+TGG - contig240end:10380-10399 None:intergenic 45.0%
GCATAATGAGTCTCCGTGAA+GGG - contig240end:15291-15310 None:intergenic 45.0%
GCATAGATGTGGAACGACAT+GGG + contig240end:14749-14768 MsG0080048185.01.T01:intron 45.0%
GCCTCAAGACGCCTAATTAA+AGG - contig240end:15381-15400 None:intergenic 45.0%
GCGAGTTACTATTATGCCCA+AGG + contig240end:17249-17268 MsG0080048185.01.T01:CDS 45.0%
GCTAGAACTGCTACTCAACA+AGG + contig240end:8254-8273 MsG0080048185.01.T01:CDS 45.0%
GGATAGACTTGACCTGAGAT+GGG + contig240end:9481-9500 MsG0080048185.01.T01:intron 45.0%
GGATAGTATCTGGTAACCGT+TGG + contig240end:15799-15818 MsG0080048185.01.T01:intron 45.0%
GGATGTTCGACATCGTTTGA+TGG - contig240end:7804-7823 None:intergenic 45.0%
GGGATCTCATGAAGCAGATT+AGG - contig240end:13448-13467 None:intergenic 45.0%
GGGCATAATAGTAACTCGCT+TGG - contig240end:17248-17267 None:intergenic 45.0%
GTAACACAAAACCCACTAGG+TGG + contig240end:15175-15194 MsG0080048185.01.T01:intron 45.0%
TAAAGACACCGAGCAACTGT+TGG - contig240end:9902-9921 None:intergenic 45.0%
TAAAGACCGAATAACCGCTG+CGG - contig240end:19282-19301 None:intergenic 45.0%
TACCCAAAAAAAGGACCCAG+TGG + contig240end:19379-19398 MsG0080048185.01.T01:intron 45.0%
TAGACAACTAGACTGCATCC+AGG + contig240end:11099-11118 MsG0080048185.01.T01:intron 45.0%
TAGGAAGCAACTTGCAACCA+AGG + contig240end:16588-16607 MsG0080048185.01.T01:CDS 45.0%
TAGGTGGGAAAATCCACTGA+TGG + contig240end:8900-8919 MsG0080048185.01.T01:intron 45.0%
TCAGCCTAACGCTTGAAAGT+TGG - contig240end:10939-10958 None:intergenic 45.0%
TCATCTGCATCTAGGAGACT+AGG + contig240end:9596-9615 MsG0080048185.01.T01:intron 45.0%
TCCAGATTCCAGATGCAATC+TGG - contig240end:9446-9465 None:intergenic 45.0%
TCCAGGACTAGGACATTAGT+TGG + contig240end:9515-9534 MsG0080048185.01.T01:intron 45.0%
TCGGTAACACAAAACCCACT+AGG + contig240end:15172-15191 MsG0080048185.01.T01:intron 45.0%
TCGTAAGTCTACTGGTGGAA+AGG + contig240end:16561-16580 MsG0080048185.01.T01:CDS 45.0%
TCTATTAATGGGGGCAACAC+TGG - contig240end:20023-20042 None:intergenic 45.0%
TCTCATGTGGGAAAAACACG+AGG + contig240end:8444-8463 MsG0080048185.01.T01:intron 45.0%
TGACTTACGAGCTGTTTGCT+TGG - contig240end:20770-20789 None:intergenic 45.0%
TGCATAATGAGTCTCCGTGA+AGG - contig240end:15292-15311 None:intergenic 45.0%
TGCATAGATGTGGAACGACA+TGG + contig240end:14748-14767 MsG0080048185.01.T01:intron 45.0%
TGTCTTTAGTCATCCATGGG+TGG + contig240end:9914-9933 MsG0080048185.01.T01:intron 45.0%
TTCGATCTGAGCAAGAGTTG+CGG - contig240end:15702-15721 None:intergenic 45.0%
TTGGTTGCAAGTTGCTTCCT+AGG - contig240end:16589-16608 None:intergenic 45.0%
TTGGTTGCAAGTTGCTTCCT+TGG - contig240end:16589-16608 None:intergenic 45.0%
TTTCATGGCTACCACCTAGT+GGG - contig240end:15189-15208 None:intergenic 45.0%
TTTGCCACACTCTTTGTGAG+AGG - contig240end:14679-14698 None:intergenic 45.0%
! ACCAGATTGCATCTGGAATC+TGG + contig240end:9442-9461 MsG0080048185.01.T01:intron 45.0%
! ACTTGAGTGGTTGTTGATGG+TGG + contig240end:10086-10105 MsG0080048185.01.T01:intron 45.0%
! AGAACCAAAAGCACAGAAGC+TGG - contig240end:20284-20303 None:intergenic 45.0%
! AGACTTACGAGCAGTTTGCT+TGG - contig240end:16551-16570 None:intergenic 45.0%
! ATAAAGTTTGGGGAGTGCAG+TGG - contig240end:19215-19234 None:intergenic 45.0%
! CGTGTTGGTAAGAGATCCAA+CGG - contig240end:15818-15837 None:intergenic 45.0%
! CTAGAACATAAGTTGGGGGT+TGG + contig240end:11153-11172 MsG0080048185.01.T01:intron 45.0%
! GAAAGCACACGGATAGTATC+TGG + contig240end:15789-15808 MsG0080048185.01.T01:intron 45.0%
! TCGGTGTCTTTAGTCATCCA+TGG + contig240end:9910-9929 MsG0080048185.01.T01:intron 45.0%
! TGAAGCTGAGTTGGAGTCTA+AGG - contig240end:13093-13112 None:intergenic 45.0%
! TGTGGCGAGTTGTGTTTTCT+CGG - contig240end:15744-15763 None:intergenic 45.0%
! TGTTGAGTAGCAGTTCTAGC+AGG - contig240end:8254-8273 None:intergenic 45.0%
! TTATTAGAAGGGCGCAAAGC+AGG - contig240end:11666-11685 None:intergenic 45.0%
! TTTTCATGGCTACCACCTAG+TGG - contig240end:15190-15209 None:intergenic 45.0%
!! AGAGTACTGAGCTCTTGATC+AGG + contig240end:16968-16987 MsG0080048185.01.T01:CDS 45.0%
!! CGTGTTTGGTGCTGTTTAGA+TGG + contig240end:17322-17341 MsG0080048185.01.T01:intron 45.0%
!! CTGACTTAAGGTTGGTGTGA+AGG - contig240end:15228-15247 None:intergenic 45.0%
!! GAAAGAATGGTGGATAGTGG+TGG + contig240end:10118-10137 MsG0080048185.01.T01:intron 45.0%
!! GCTGAGCTAGTTTGTTTGCT+TGG - contig240end:14810-14829 None:intergenic 45.0%
!! GGAAGAGTATTGCCAGATCT+TGG - contig240end:12976-12995 None:intergenic 45.0%
!! GGATCTGACGGTTTGTTATG+TGG - contig240end:15762-15781 None:intergenic 45.0%
!! GTGTGTGTTTGTTTTCACGC+TGG - contig240end:15471-15490 None:intergenic 45.0%
!! GTTGGTTCGTGAAATTGCTC+AGG + contig240end:17008-17027 MsG0080048185.01.T01:CDS 45.0%
!! TCATGTTGGTGATTCTGCGT+TGG + contig240end:8951-8970 MsG0080048185.01.T01:CDS 45.0%
!! TTCTGCGAAGGTGTTCTTGT+GGG - contig240end:7939-7958 None:intergenic 45.0%
!! TTTGGTGCTGTTTAGATGGG+TGG + contig240end:17326-17345 MsG0080048185.01.T01:intron 45.0%
!!! ATGAGCGAGTTGGTTTTGGT+TGG - contig240end:14152-14171 None:intergenic 45.0%
!!! TGGGAATTTTGATTCTGCGG+AGG - contig240end:7784-7803 None:intergenic 45.0%
!! AAATTAACAAAAAAATTAAT+AGG - contig240end:10034-10053 None:intergenic 5.0%
!! ATATATATTCTATAAATATT+TGG + contig240end:19587-19606 MsG0080048185.01.T01:intron 5.0%
!!! AAAACTTTTTATATAAAAAA+GGG + contig240end:17940-17959 MsG0080048185.01.T01:intron 5.0%
!!! AATTTTGAAATTTATAATAA+TGG + contig240end:8509-8528 MsG0080048185.01.T01:intron 5.0%
!!! TAAAACTTTTTATATAAAAA+AGG + contig240end:17939-17958 MsG0080048185.01.T01:intron 5.0%
!!! TTTTTTCATAATTATTTAAT+CGG + contig240end:17904-17923 MsG0080048185.01.T01:intron 5.0%
AAAGACAAGGCAGACCATGG+AGG + contig240end:11189-11208 MsG0080048185.01.T01:intron 50.0%
AAGTCTGCACCAACTACTGG+TGG + contig240end:20945-20964 MsG0080048185.01.T01:CDS 50.0%
AATGGATGAATCCCCTCCCT+TGG + contig240end:13038-13057 MsG0080048185.01.T01:intron 50.0%
ACCGAAGAGCAACAGTTCCT+GGG - contig240end:20995-21014 None:intergenic 50.0%
ACGCAGGATTGTTGCACATG+TGG + contig240end:19095-19114 MsG0080048185.01.T01:intron 50.0%
ACTGCTCGTAAGTCTACTGG+TGG + contig240end:16556-16575 MsG0080048185.01.T01:CDS 50.0%
AGAAACCAAACCGATCTCGC+CGG - contig240end:7911-7930 None:intergenic 50.0%
AGATGGAGTCAGACTGCATC+TGG + contig240end:11008-11027 MsG0080048185.01.T01:intron 50.0%
AGGCTGCATGTACCTAGAGT+TGG - contig240end:18160-18179 None:intergenic 50.0%
AGTAGTGCTCGAAACAGTGG+CGG - contig240end:19638-19657 None:intergenic 50.0%
ATGCAAGCACAGCATGACTC+TGG - contig240end:17159-17178 None:intergenic 50.0%
CACAAGAACACCTTCGCAGA+AGG + contig240end:7938-7957 MsG0080048185.01.T01:CDS 50.0%
CAGACTTACGTGCAGCCTAA+AGG - contig240end:16706-16725 None:intergenic 50.0%
CATGTACCTAGAGTTGGGTC+TGG - contig240end:18154-18173 None:intergenic 50.0%
CCAAAAGCAGCATCCTCCTT+AGG - contig240end:21515-21534 None:intergenic 50.0%
CCCAAAAAAAGGACCCAGTG+GGG + contig240end:19381-19400 MsG0080048185.01.T01:intron 50.0%
CCCAACTAATGTCCTAGTCC+TGG - contig240end:9519-9538 None:intergenic 50.0%
CTCTTGCTCATGTCTCGACT+AGG + contig240end:9170-9189 MsG0080048185.01.T01:intron 50.0%
CTGGGAATGTTGGAAGATGG+AGG + contig240end:8279-8298 MsG0080048185.01.T01:CDS 50.0%
CTTAAGGAGGATGCCGTGTT+TGG + contig240end:17308-17327 MsG0080048185.01.T01:intron 50.0%
CTTGCCAACTGGATGTCCTT+GGG - contig240end:17268-17287 None:intergenic 50.0%
GAAAGGAAGTTTGACTGGGG+AGG + contig240end:10604-10623 MsG0080048185.01.T01:intron 50.0%
GACACCTCAACGAACTCATG+TGG + contig240end:17827-17846 MsG0080048185.01.T01:intron 50.0%
GAGACATGGTTGGGAATACG+TGG + contig240end:9011-9030 MsG0080048185.01.T01:CDS 50.0%
GAGCTTCCTGATCAAGAGCT+CGG - contig240end:16977-16996 None:intergenic 50.0%
GATGCGCCATTCGAGATTGA+AGG + contig240end:15059-15078 MsG0080048185.01.T01:intron 50.0%
GCAAAGCAGGCACAATGAAG+TGG - contig240end:11653-11672 None:intergenic 50.0%
GCACGGGATATATGGACAAC+AGG - contig240end:8605-8624 None:intergenic 50.0%
GCATCTAGGAGACTAGGACT+AGG + contig240end:9602-9621 MsG0080048185.01.T01:intron 50.0%
GCGATAGACATGGCCTGAAA+TGG + contig240end:11073-11092 MsG0080048185.01.T01:intron 50.0%
GCTGCTGAGGCATATCTTGT+TGG + contig240end:17187-17206 MsG0080048185.01.T01:CDS 50.0%
GGCATAATACCCTTCTGCGA+AGG - contig240end:7951-7970 None:intergenic 50.0%
GGCTGCATGTACCTAGAGTT+GGG - contig240end:18159-18178 None:intergenic 50.0%
GGGATAGACTTGACCTGAGA+TGG + contig240end:9480-9499 MsG0080048185.01.T01:intron 50.0%
GGGGACCCATATTCTCATGT+TGG + contig240end:8937-8956 MsG0080048185.01.T01:CDS 50.0%
GGTGGGAAAATCCACTGATG+GGG + contig240end:8902-8921 MsG0080048185.01.T01:intron 50.0%
GGTTCCTCTCACAAAGAGTG+TGG + contig240end:14672-14691 MsG0080048185.01.T01:intron 50.0%
GTCACACAAAGCCCAAACTC+CGG + contig240end:14297-14316 MsG0080048185.01.T01:intron 50.0%
GTCGAGACATGAGCAAGAGA+AGG - contig240end:9169-9188 None:intergenic 50.0%
GTGTCCACATGAGTTCGTTG+AGG - contig240end:17834-17853 None:intergenic 50.0%
GTTGGAGGTGATGCTAGTGA+TGG + contig240end:15118-15137 MsG0080048185.01.T01:intron 50.0%
GTTTGACTGGGGAGGTAAAG+TGG + contig240end:10612-10631 MsG0080048185.01.T01:intron 50.0%
TAAATGGAAGGGTCCACCCA+AGG + contig240end:11733-11752 MsG0080048185.01.T01:intron 50.0%
TAGATGTGGAACGACATGGG+GGG + contig240end:14752-14771 MsG0080048185.01.T01:intron 50.0%
TATGCCCAAGGACATCCAGT+TGG + contig240end:17261-17280 MsG0080048185.01.T01:CDS 50.0%
TCAAGAGCTCGGTACTCTTC+TGG - contig240end:21178-21197 None:intergenic 50.0%
TCACCGAAGAGCAACAGTTC+CGG - contig240end:16771-16790 None:intergenic 50.0%
TCGTAAGTCAACCGGTGGTA+AGG + contig240end:20780-20799 MsG0080048185.01.T01:CDS 50.0%
TGCTGTGCTTGCATTGCAAG+AGG + contig240end:17165-17184 MsG0080048185.01.T01:CDS 50.0%
TGTTCAGCTTCAGCAGCCTT+GGG - contig240end:11752-11771 None:intergenic 50.0%
TTCACGAACCAACCTCTGGA+AGG - contig240end:17001-17020 None:intergenic 50.0%
TTGCGTGCAGCCTAAAGGTA+AGG - contig240end:20927-20946 None:intergenic 50.0%
TTTGGACTCGACCAATGCGT+CGG - contig240end:7887-7906 None:intergenic 50.0%
TTTGGGTATGCAGCCACCTT+TGG + contig240end:17519-17538 MsG0080048185.01.T01:intron 50.0%
! ATCGTTTTGCTCGTGGTTGC+AGG + contig240end:11688-11707 MsG0080048185.01.T01:intron 50.0%
! CAGCATGACTCTGGAAACGA+AGG - contig240end:17150-17169 None:intergenic 50.0%
! GAAGGTGTGGCAGTGTATAC+AGG - contig240end:9791-9810 None:intergenic 50.0%
! GTTCGTTGAGGTGTCTACAC+AGG - contig240end:17822-17841 None:intergenic 50.0%
! TCACGAACCAACCTCTGGAA+GGG - contig240end:17000-17019 None:intergenic 50.0%
! TCACGAACCAACCTCTGGAA+TGG - contig240end:17000-17019 None:intergenic 50.0%
!! ACATGTCACCTTTTCGAGCC+AGG + contig240end:19161-19180 MsG0080048185.01.T01:intron 50.0%
!! AGAATGGTGGATAGTGGTGG+TGG + contig240end:10121-10140 MsG0080048185.01.T01:intron 50.0%
!! AGAGTACCGAGCTCTTGATC+AGG + contig240end:21180-21199 MsG0080048185.01.T01:CDS 50.0%
!! ATGTCACCTTTTCGAGCCAG+GGG + contig240end:19163-19182 MsG0080048185.01.T01:intron 50.0%
!! CACGAACCAACCTCTGGAAT+GGG - contig240end:21211-21230 None:intergenic 50.0%
!! CATGTCACCTTTTCGAGCCA+GGG + contig240end:19162-19181 MsG0080048185.01.T01:intron 50.0%
!! CTTCTGCGAAGGTGTTCTTG+TGG - contig240end:7940-7959 None:intergenic 50.0%
!! GCAAGAGAGAGTACCTGGAT+GGG - contig240end:12445-12464 None:intergenic 50.0%
!! GTTGAAGGTGCTTGTCCGAT+TGG + contig240end:18403-18422 MsG0080048185.01.T01:intron 50.0%
!! GTTGTGCAAGAGAGAGTACC+TGG - contig240end:12450-12469 None:intergenic 50.0%
!! TGCAAGAGAGAGTACCTGGA+TGG - contig240end:12446-12465 None:intergenic 50.0%
!!! CCCCACTGGGTCCTTTTTTT+GGG - contig240end:19384-19403 None:intergenic 50.0%
!!! CCTAAGGAGGATGCTGCTTT+TGG + contig240end:21512-21531 MsG0080048185.01.T01:exon 50.0%
!!! TCCCCACTGGGTCCTTTTTT+TGG - contig240end:19385-19404 None:intergenic 50.0%
AAACCACATCGTTACCGCCC+CGG + contig240end:16749-16768 MsG0080048185.01.T01:CDS 55.0%
AAGCCACATCGTTATCGCCC+AGG + contig240end:20975-20994 MsG0080048185.01.T01:CDS 55.0%
AAGTCTGCTCCCACTACTGG+TGG + contig240end:16719-16738 MsG0080048185.01.T01:CDS 55.0%
ACAGCTCGTAAGTCAACCGG+TGG + contig240end:20775-20794 MsG0080048185.01.T01:CDS 55.0%
ACCGAAGAGCAACAGTTCCG+GGG - contig240end:16769-16788 None:intergenic 55.0%
AGACGGATCTGTGGCAAGGT+TGG - contig240end:10542-10561 None:intergenic 55.0%
AGGACATCCAGTTGGCAAGG+AGG + contig240end:17269-17288 MsG0080048185.01.T01:CDS 55.0%
ATGAGAATATGGGTCCCCGG+TGG - contig240end:8935-8954 None:intergenic 55.0%
CACCGAAGAGCAACAGTTCC+GGG - contig240end:16770-16789 None:intergenic 55.0%
CACCGAAGAGCAACAGTTCC+TGG - contig240end:16770-16789 None:intergenic 55.0%
CAGACTTGCGTGCAGCCTAA+AGG - contig240end:20932-20951 None:intergenic 55.0%
CCAAGGACATCCAGTTGGCA+AGG + contig240end:17266-17285 MsG0080048185.01.T01:CDS 55.0%
CCTTGCCAACTGGATGTCCT+TGG - contig240end:17269-17288 None:intergenic 55.0%
CGCAAGTCTGCACCAACTAC+TGG + contig240end:20942-20961 MsG0080048185.01.T01:CDS 55.0%
CGTAAGTCTGCTCCCACTAC+TGG + contig240end:16716-16735 MsG0080048185.01.T01:CDS 55.0%
CGTTGGGTGTATCTACGTGC+AGG - contig240end:13420-13439 None:intergenic 55.0%
CTGTTCAGCTTCAGCAGCCT+TGG - contig240end:11753-11772 None:intergenic 55.0%
GAAACCAAACCGATCTCGCC+GGG - contig240end:7910-7929 None:intergenic 55.0%
GAAGCTCCCATTCCAGAGGT+TGG + contig240end:21202-21221 MsG0080048185.01.T01:CDS 55.0%
GACGGATCTGTGGCAAGGTT+GGG - contig240end:10541-10560 None:intergenic 55.0%
GCAAACGAGACATCCACCAG+AGG - contig240end:18246-18265 None:intergenic 55.0%
GCATCACACACCGTTGCTGA+AGG + contig240end:11558-11577 MsG0080048185.01.T01:intron 55.0%
GCCCAGGAACTGTTGCTCTT+CGG + contig240end:20991-21010 MsG0080048185.01.T01:CDS 55.0%
GGATAGTGTCTCGTAGCCGT+TGG + contig240end:20082-20101 MsG0080048185.01.T01:intron 55.0%
GGGAAAATCCACTGATGGGG+TGG + contig240end:8905-8924 MsG0080048185.01.T01:CDS 55.0%
GTTCAGAGGATCATCCGTCG+AGG + contig240end:14592-14611 MsG0080048185.01.T01:intron 55.0%
GTTCCTGGGCGATAACGATG+TGG - contig240end:20981-21000 None:intergenic 55.0%
TCAGGAAGCTCCCATTCCAG+AGG + contig240end:21198-21217 MsG0080048185.01.T01:CDS 55.0%
TGATACTGAAGAGGCGGCCA+AGG + contig240end:8978-8997 MsG0080048185.01.T01:CDS 55.0%
TGCATTGCAAGAGGCTGCTG+AGG + contig240end:17174-17193 MsG0080048185.01.T01:CDS 55.0%
! CACGAACCAACCTCTGGAAG+GGG - contig240end:16999-17018 None:intergenic 55.0%
! CGTGTCGGTCAGAGATCCAA+CGG - contig240end:20101-20120 None:intergenic 55.0%
! GCATTGGTCGAGTCCAAACC+CGG + contig240end:7889-7908 MsG0080048185.01.T01:CDS 55.0%
! GGATCTCTTTAGAGACCCCC+AGG + contig240end:19187-19206 MsG0080048185.01.T01:intron 55.0%
! TCTCTAAAGAGATCCGCCCC+TGG - contig240end:19182-19201 None:intergenic 55.0%
! TCTGAGACGGATCTGTGGCA+AGG - contig240end:10546-10565 None:intergenic 55.0%
!! AGCTGAGGTTAGAGAGTGCC+TGG + contig240end:9652-9671 MsG0080048185.01.T01:intron 55.0%
!! CTACTGGTGGAAAGGCACCT+AGG + contig240end:16569-16588 MsG0080048185.01.T01:CDS 55.0%
!! CTTCCTTGGTGCCTTACCAC+CGG - contig240end:20794-20813 None:intergenic 55.0%
!! GCTGAGGTTAGAGAGTGCCT+GGG + contig240end:9653-9672 MsG0080048185.01.T01:intron 55.0%
!! GGCGAGATCGGTTTGGTTTC+TGG + contig240end:7910-7929 MsG0080048185.01.T01:CDS 55.0%
!! TGGTGGATAGTGGTGGTGGT+TGG + contig240end:10125-10144 MsG0080048185.01.T01:intron 55.0%
AACAGGCGGGGCGATAGACA+TGG + contig240end:11063-11082 MsG0080048185.01.T01:intron 60.0%
ACATGGGGGGACCACAAACG+AGG + contig240end:14765-14784 MsG0080048185.01.T01:intron 60.0%
ACGCGGGTTCAAATCCCCAC+TGG - contig240end:19398-19417 None:intergenic 60.0%
AGTCATCCATGGGTGGCTGC+AGG + contig240end:9921-9940 MsG0080048185.01.T01:intron 60.0%
ATCCGTGGTGAGCGCGCTTA+AGG + contig240end:17292-17311 MsG0080048185.01.T01:intron 60.0%
ATCCGTGGTGAGCGTGCCTA+AGG + contig240end:21496-21515 MsG0080048185.01.T01:CDS 60.0%
CAAACCCGGCGAGATCGGTT+TGG + contig240end:7903-7922 MsG0080048185.01.T01:CDS 60.0%
CAAACCGATCTCGCCGGGTT+TGG - contig240end:7905-7924 None:intergenic 60.0%
CACGGATCCTCCTTGCCAAC+TGG - contig240end:17279-17298 None:intergenic 60.0%
CAGTTGGCAAGGAGGATCCG+TGG + contig240end:17277-17296 MsG0080048185.01.T01:CDS 60.0%
CGATGCCCAGACCCAACTCT+AGG + contig240end:18145-18164 MsG0080048185.01.T01:intron 60.0%
CGCGGGTTCAAATCCCCACT+GGG - contig240end:19397-19416 None:intergenic 60.0%
CTCCTTAAGCGCGCTCACCA+CGG - contig240end:17297-17316 None:intergenic 60.0%
CTCCTTAGGCACGCTCACCA+CGG - contig240end:21501-21520 None:intergenic 60.0%
CTGATGGGGTGGACATCCAC+CGG + contig240end:8916-8935 MsG0080048185.01.T01:CDS 60.0%
CTTCACTGGCACCTCCTCCA+TGG - contig240end:11206-11225 None:intergenic 60.0%
CTTGGCCTGGGGAACTCACA+CGG + contig240end:10322-10341 MsG0080048185.01.T01:intron 60.0%
GAAGAGCAACAGTTCCGGGG+CGG - contig240end:16766-16785 None:intergenic 60.0%
GAAGCTCCCCTTCCAGAGGT+TGG + contig240end:16990-17009 MsG0080048185.01.T01:CDS 60.0%
GACAACCGTGTGAGTTCCCC+AGG - contig240end:10330-10349 None:intergenic 60.0%
GACAAGGCAGACCATGGAGG+AGG + contig240end:11192-11211 MsG0080048185.01.T01:intron 60.0%
GAGTCCAAACCCGGCGAGAT+CGG + contig240end:7898-7917 MsG0080048185.01.T01:CDS 60.0%
GCCCCGGAACTGTTGCTCTT+CGG + contig240end:16765-16784 MsG0080048185.01.T01:CDS 60.0%
GTCGAACATCCTGCAACGCG+CGG + contig240end:7813-7832 MsG0080048185.01.T01:CDS 60.0%
GTGGATGTCCACCCCATCAG+TGG - contig240end:8916-8935 None:intergenic 60.0%
TAAGGACCTGCAGCCACCCA+TGG - contig240end:9930-9949 None:intergenic 60.0%
TCAGCTTCAGCAGCCTTGGG+TGG - contig240end:11749-11768 None:intergenic 60.0%
TCAGGAAGCTCCCCTTCCAG+AGG + contig240end:16986-17005 MsG0080048185.01.T01:CDS 60.0%
TGATGGGGTGGACATCCACC+GGG + contig240end:8917-8936 MsG0080048185.01.T01:CDS 60.0%
! CAACCGGTGGTAAGGCACCA+AGG + contig240end:20788-20807 MsG0080048185.01.T01:CDS 60.0%
! CCAATGCGTCGGTGGAGAAC+CGG - contig240end:7876-7895 None:intergenic 60.0%
!! TCACCTTTTCGAGCCAGGGG+CGG + contig240end:19166-19185 MsG0080048185.01.T01:intron 60.0%
ACCTGGATGGGTGCAACGCC+AGG - contig240end:12433-12452 None:intergenic 65.0%
CCGGTTCTCCACCGACGCAT+TGG + contig240end:7873-7892 MsG0080048185.01.T01:CDS 65.0%
CCTGGATGGGTGCAACGCCA+GGG - contig240end:12432-12451 None:intergenic 65.0%
CGTGGTGAGCGCGCTTAAGG+AGG + contig240end:17295-17314 MsG0080048185.01.T01:intron 65.0%
CGTGGTGAGCGTGCCTAAGG+AGG + contig240end:21499-21518 MsG0080048185.01.T01:exon 65.0%
GATGGGGTGGACATCCACCG+GGG + contig240end:8918-8937 MsG0080048185.01.T01:CDS 65.0%
GGACTCGACCAATGCGTCGG+TGG - contig240end:7884-7903 None:intergenic 65.0%
GGTCGCGTGTTCGAACCCCA+TGG + contig240end:19313-19332 MsG0080048185.01.T01:intron 65.0%
GTTCCGGGGCGGTAACGATG+TGG - contig240end:16755-16774 None:intergenic 65.0%
! ATGCGTCGGTGGAGAACCGG+CGG - contig240end:7873-7892 None:intergenic 65.0%
! CATATGTACCGGCGCCGCAG+CGG + contig240end:19265-19284 MsG0080048185.01.T01:intron 65.0%
! GATCCGCCCCTGGCTCGAAA+AGG - contig240end:19172-19191 None:intergenic 65.0%
! TGGGGAGTGCAGTGGCACCT+GGG - contig240end:19207-19226 None:intergenic 65.0%
! TTGGGGAGTGCAGTGGCACC+TGG - contig240end:19208-19227 None:intergenic 65.0%
CCCTGGCGTTGCACCCATCC+AGG + contig240end:12429-12448 MsG0080048185.01.T01:intron 70.0%
CCGAATAACCGCTGCGGCGC+CGG - contig240end:19276-19295 None:intergenic 70.0%
CCGGCGCCGCAGCGGTTATT+CGG + contig240end:19273-19292 MsG0080048185.01.T01:intron 70.0%
GGTGGAGAACCGGCGGGTGA+GGG - contig240end:7866-7885 None:intergenic 70.0%
! GGGAGTGCAGTGGCACCTGG+GGG - contig240end:19205-19224 None:intergenic 70.0%
! GGGGAGTGCAGTGGCACCTG+GGG - contig240end:19206-19225 None:intergenic 70.0%
! TGCGTCGGTGGAGAACCGGC+GGG - contig240end:7872-7891 None:intergenic 70.0%
CGGTGGAGAACCGGCGGGTG+AGG - contig240end:7867-7886 None:intergenic 75.0%
CTGCAACGCGCGGCGAGTCG+CGG + contig240end:7823-7842 MsG0080048185.01.T01:CDS 75.0%
GCGGGTGAGGGTGGCGCGTA+GGG - contig240end:7854-7873 None:intergenic 75.0%
GGAGAACCGGCGGGTGAGGG+TGG - contig240end:7863-7882 None:intergenic 75.0%
TACGCGCCACCCTCACCCGC+CGG + contig240end:7854-7873 MsG0080048185.01.T01:CDS 75.0%
! CAACGCGCGGCGAGTCGCGG+TGG + contig240end:7826-7845 MsG0080048185.01.T01:CDS 80.0%
! CGCGACTCGCCGCGCGTTGC+AGG - contig240end:7825-7844 None:intergenic 80.0%
! GGCGGGTGAGGGTGGCGCGT+AGG - contig240end:7855-7874 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
contig240end gene 7733 21795 7733 ID=MsG0080048185.01;Name=MsG0080048185.01
contig240end mRNA 7733 21795 7733 ID=MsG0080048185.01.T01;Parent=MsG0080048185.01;Name=MsG0080048185.01.T01;_AED=0.43;_eAED=0.43;_QI=78|0.54|0.58|1|1|1|12|279|398
contig240end exon 7733 7960 7733 ID=MsG0080048185.01.T01:exon:8507;Parent=MsG0080048185.01.T01
contig240end exon 8236 8324 8236 ID=MsG0080048185.01.T01:exon:8508;Parent=MsG0080048185.01.T01
contig240end exon 8903 9032 8903 ID=MsG0080048185.01.T01:exon:8509;Parent=MsG0080048185.01.T01
contig240end exon 16538 16609 16538 ID=MsG0080048185.01.T01:exon:8510;Parent=MsG0080048185.01.T01
contig240end exon 16710 16786 16710 ID=MsG0080048185.01.T01:exon:8511;Parent=MsG0080048185.01.T01
contig240end exon 16948 17038 16948 ID=MsG0080048185.01.T01:exon:8512;Parent=MsG0080048185.01.T01
contig240end exon 17142 17298 17142 ID=MsG0080048185.01.T01:exon:8513;Parent=MsG0080048185.01.T01
contig240end exon 18356 18375 18356 ID=MsG0080048185.01.T01:exon:8514;Parent=MsG0080048185.01.T01
contig240end exon 20757 20828 20757 ID=MsG0080048185.01.T01:exon:8515;Parent=MsG0080048185.01.T01
contig240end exon 20936 21012 20936 ID=MsG0080048185.01.T01:exon:8516;Parent=MsG0080048185.01.T01
contig240end exon 21160 21250 21160 ID=MsG0080048185.01.T01:exon:8517;Parent=MsG0080048185.01.T01
contig240end exon 21346 21795 21346 ID=MsG0080048185.01.T01:exon:8518;Parent=MsG0080048185.01.T01
contig240end five_prime_UTR 7733 7810 7733 ID=MsG0080048185.01.T01:five_prime_utr;Parent=MsG0080048185.01.T01
contig240end CDS 7811 7960 7811 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 8236 8324 8236 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 8903 9032 8903 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 16538 16609 16538 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 16710 16786 16710 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 16948 17038 16948 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 17142 17298 17142 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 18356 18375 18356 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 20757 20828 20757 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 20936 21012 20936 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 21160 21250 21160 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end CDS 21346 21516 21346 ID=MsG0080048185.01.T01:cds;Parent=MsG0080048185.01.T01
contig240end three_prime_UTR 21517 21795 21517 ID=MsG0080048185.01.T01:three_prime_utr;Parent=MsG0080048185.01.T01
Gene Sequence

>MsG0080048185.01.T01

ATGTCGAACATCCTGCAACGCGCGGCGAGTCGCGGTGGTTCCCTACGCGCCACCCTCACCCGCCGGTTCTCCACCGACGCATTGGTCGAGTCCAAACCCGGCGAGATCGGTTTGGTTTCTGGAATCCCACAAGAACACCTTCGCAGAAGGGTTTTGATTTACTCACCTGCTAGAACTGCTACTCAACAAGGATCTGGGAATGTTGGAAGATGGAGGATCAACTTCTTATCAACCCAGAAGTGGGAAAATCCACTGATGGGGTGGACATCCACCGGGGACCCATATTCTCATGTTGGTGATTCTGCGTTGGATTTTGATACTGAAGAGGCGGCCAAGGAATTTGCAGAGAGACATGGTTGGGAATACGTGATGGCACGTACCAAGCAAACTGCTCGTAAGTCTACTGGTGGAAAGGCACCTAGGAAGCAACTTGCAACCAAGGCTGCACGTAAGTCTGCTCCCACTACTGGTGGAGTTAAGAAACCACATCGTTACCGCCCCGGAACTGTTGCTCTTCGTGAGATTAGGAAGTATCAGAAGAGTACTGAGCTCTTGATCAGGAAGCTCCCCTTCCAGAGGTTGGTTCGTGAAATTGCTCAAGACTTCAAGACTGACCTTCGTTTCCAGAGTCATGCTGTGCTTGCATTGCAAGAGGCTGCTGAGGCATATCTTGTTGGTCTGTTTGAGGACACTAACTTGTGCGCTATCCATGCCAAGCGAGTTACTATTATGCCCAAGGACATCCAGTTGGCAAGGAGGATCCGTGCTTCCCATGGAGAATGCATAATGGCACGTACCAAGCAAACAGCTCGTAAGTCAACCGGTGGTAAGGCACCAAGGAAGCAACTTGCAACCAAGGCTGCACGCAAGTCTGCACCAACTACTGGTGGAGTTAAGAAGCCACATCGTTATCGCCCAGGAACTGTTGCTCTTCGTGAGATTAGGAAGTACCAGAAGAGTACCGAGCTCTTGATCAGGAAGCTCCCATTCCAGAGGTTGGTTCGTGAAATTGCTCAGGACTTCAAGACTGACCTTCGTTTCCAGAGTCATGCTGTGCTTGCATTGCAAGAGGCTGCTGAGGCATATCTTGTTGGTCTCTTTGAGGACACTAACTTGTGCGCTATCCATGCCAAGCGAGTTACTATTATGCCCAAGGACATCCAGTTGGCAAGGAGGATCCGTGGTGAGCGTGCCTAA
Protein sequence

>MsG0080048185.01.T01

MSNILQRAASRGGSLRATLTRRFSTDALVESKPGEIGLVSGIPQEHLRRRVLIYSPARTATQQGSGNVGRWRINFLSTQKWENPLMGWTSTGDPYSHVGDSALDFDTEEAAKEFAERHGWEYVMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRASHGECIMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*