Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040418.01.T01 | XP_024626467.1 | 98.745 | 239 | 2 | 1 | 1 | 238 | 1 | 239 | 3.15E-171 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040418.01.T01 | O80366 | 65.021 | 243 | 71 | 6 | 1 | 238 | 1 | 234 | 1.12E-99 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040418.01.T01 | A0A072U1M0 | 98.745 | 239 | 2 | 1 | 1 | 238 | 1 | 239 | 1.50e-171 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0780040418.01 | 0.823983 | 1.032131e-53 | 9.024929e-51 |
| MsG0080048185.01 | MsG0780040418.01 | -0.834958 | 2.217228e-56 | 2.672756e-53 |
| MsG0080048687.01 | MsG0780040418.01 | 0.810769 | 9.775208e-51 | 5.944833e-48 |
| MsG0080048843.01 | MsG0780040418.01 | 0.807958 | 3.919301e-50 | 2.212828e-47 |
| MsG0080048968.01 | MsG0780040418.01 | 0.821810 | 3.312965e-53 | 2.723823e-50 |
| MsG0180000023.01 | MsG0780040418.01 | 0.812669 | 3.774033e-51 | 2.414248e-48 |
| MsG0180000295.01 | MsG0780040418.01 | 0.846183 | 2.549147e-59 | 4.351270e-56 |
| MsG0180000331.01 | MsG0780040418.01 | 0.863929 | 1.752719e-64 | 5.405555e-61 |
| MsG0180000446.01 | MsG0780040418.01 | 0.848302 | 6.685576e-60 | 1.221555e-56 |
| MsG0180000611.01 | MsG0780040418.01 | 0.802735 | 4.872020e-49 | 2.404777e-46 |
| MsG0180000822.01 | MsG0780040418.01 | 0.809325 | 2.000867e-50 | 1.171258e-47 |
| MsG0180000824.01 | MsG0780040418.01 | 0.828345 | 9.466745e-55 | 9.383754e-52 |
| MsG0180001009.01 | MsG0780040418.01 | 0.840995 | 6.213147e-58 | 9.003966e-55 |
| MsG0180001117.01 | MsG0780040418.01 | 0.827286 | 1.701542e-54 | 1.635479e-51 |
| MsG0180001237.01 | MsG0780040418.01 | 0.823648 | 1.236641e-53 | 1.071237e-50 |
| MsG0180001566.01 | MsG0780040418.01 | 0.842098 | 3.180935e-58 | 4.771890e-55 |
| MsG0180002075.01 | MsG0780040418.01 | 0.821951 | 3.072257e-53 | 2.535936e-50 |
| MsG0180002273.01 | MsG0780040418.01 | 0.847707 | 9.754460e-60 | 1.748811e-56 |
| MsG0180002992.01 | MsG0780040418.01 | 0.823500 | 1.339465e-53 | 1.155402e-50 |
| MsG0180003586.01 | MsG0780040418.01 | 0.842776 | 2.103750e-58 | 3.223342e-55 |
| MsG0180003822.01 | MsG0780040418.01 | 0.813146 | 2.967159e-51 | 1.922216e-48 |
| MsG0180004160.01 | MsG0780040418.01 | 0.839373 | 1.647442e-57 | 2.270643e-54 |
| MsG0180004272.01 | MsG0780040418.01 | 0.844739 | 6.272243e-59 | 1.022334e-55 |
| MsG0180004388.01 | MsG0780040418.01 | 0.808041 | 3.763311e-50 | 2.129347e-47 |
| MsG0180004991.01 | MsG0780040418.01 | 0.837487 | 5.048328e-57 | 6.567916e-54 |
| MsG0180005233.01 | MsG0780040418.01 | 0.809519 | 1.818323e-50 | 1.069886e-47 |
| MsG0180005371.01 | MsG0780040418.01 | 0.845558 | 3.768437e-59 | 6.304150e-56 |
| MsG0180005443.01 | MsG0780040418.01 | 0.820453 | 6.806182e-53 | 5.387822e-50 |
| MsG0180005451.01 | MsG0780040418.01 | 0.818354 | 2.048219e-52 | 1.529712e-49 |
| MsG0180005493.01 | MsG0780040418.01 | 0.820342 | 7.214326e-53 | 5.693232e-50 |
| MsG0780040418.01 | MsG0780040856.01 | 0.802751 | 4.834254e-49 | 2.387128e-46 |
| MsG0780040418.01 | MsG0780040861.01 | 0.807278 | 5.465387e-50 | 3.031586e-47 |
| MsG0780040418.01 | MsG0780040926.01 | 0.804909 | 1.722205e-49 | 8.989368e-47 |
| MsG0780040418.01 | MsG0780041193.01 | 0.801556 | 8.515251e-49 | 4.078682e-46 |
| MsG0780040418.01 | MsG0780041258.01 | 0.805945 | 1.044940e-49 | 5.600858e-47 |
| MsG0780040418.01 | MsG0780041390.01 | 0.816543 | 5.239744e-52 | 3.723284e-49 |
| MsG0780040418.01 | MsG0780041423.01 | 0.815418 | 9.340391e-52 | 6.436137e-49 |
| MsG0780040418.01 | MsG0880042128.01 | 0.812041 | 5.174896e-51 | 3.254949e-48 |
| MsG0780040418.01 | MsG0880042129.01 | 0.819038 | 1.432555e-52 | 1.090300e-49 |
| MsG0780040418.01 | MsG0880042543.01 | 0.811545 | 6.635994e-51 | 4.119437e-48 |
| MsG0780040418.01 | MsG0880042795.01 | 0.805010 | 1.640573e-49 | 8.584571e-47 |
| MsG0780040418.01 | MsG0880043194.01 | 0.806895 | 6.586686e-50 | 3.617234e-47 |
| MsG0780040418.01 | MsG0880043252.01 | 0.821776 | 3.372651e-53 | 2.770158e-50 |
| MsG0780040418.01 | MsG0880043716.01 | 0.802739 | 4.863803e-49 | 2.400915e-46 |
| MsG0780040418.01 | MsG0880043748.01 | 0.813145 | 2.969047e-51 | 1.923372e-48 |
| MsG0780040418.01 | MsG0880044565.01 | 0.812645 | 3.820888e-51 | 2.442681e-48 |
| MsG0780040418.01 | MsG0880045329.01 | 0.836291 | 1.019911e-56 | 1.279844e-53 |
| MsG0780040418.01 | MsG0880045433.01 | -0.810282 | 1.245699e-50 | 7.477751e-48 |
| MsG0780040418.01 | MsG0880045583.01 | 0.810957 | 8.899555e-51 | 5.439986e-48 |
| MsG0780040418.01 | MsG0880045803.01 | 0.801620 | 8.261092e-49 | 3.963282e-46 |
| MsG0780040418.01 | MsG0880046027.01 | 0.802740 | 4.860369e-49 | 2.399316e-46 |
| MsG0780040418.01 | MsG0880046068.01 | 0.832010 | 1.206281e-55 | 1.331429e-52 |
| MsG0780040418.01 | MsG0880046074.01 | 0.866086 | 3.686218e-65 | 1.227080e-61 |
| MsG0780040418.01 | MsG0880046086.01 | 0.836841 | 7.387065e-57 | 9.422697e-54 |
| MsG0780040418.01 | MsG0880046538.01 | 0.801940 | 7.101815e-49 | 3.434912e-46 |
| MsG0780040418.01 | MsG0880046762.01 | 0.821465 | 3.980943e-53 | 3.241034e-50 |
| MsG0780040418.01 | MsG0880046933.01 | 0.841270 | 5.262138e-58 | 7.691100e-55 |
| MsG0780040418.01 | MsG0880047120.01 | 0.809021 | 2.324821e-50 | 1.349783e-47 |
| MsG0780040418.01 | MsG0880047428.01 | 0.820741 | 5.843802e-53 | 4.662767e-50 |
| MsG0780040418.01 | MsG0880047743.01 | 0.808808 | 2.581545e-50 | 1.490373e-47 |
| MsG0280010707.01 | MsG0780040418.01 | 0.809949 | 1.469137e-50 | 8.743251e-48 |
| MsG0380011614.01 | MsG0780040418.01 | 0.802018 | 6.844184e-49 | 3.316970e-46 |
| MsG0380012160.01 | MsG0780040418.01 | 0.804833 | 1.787155e-49 | 9.309438e-47 |
| MsG0380013549.01 | MsG0780040418.01 | 0.818131 | 2.300735e-52 | 1.707644e-49 |
| MsG0380014576.01 | MsG0780040418.01 | 0.807618 | 4.628996e-50 | 2.590317e-47 |
| MsG0380014778.01 | MsG0780040418.01 | 0.807670 | 4.513012e-50 | 2.528813e-47 |
| MsG0680030740.01 | MsG0780040418.01 | 0.813301 | 2.743765e-51 | 1.785083e-48 |
| MsG0680031651.01 | MsG0780040418.01 | 0.806706 | 7.220877e-50 | 3.946206e-47 |
| MsG0680033926.01 | MsG0780040418.01 | 0.827159 | 1.824547e-54 | 1.747150e-51 |
| MsG0680035048.01 | MsG0780040418.01 | 0.804814 | 1.803253e-49 | 9.388858e-47 |
| MsG0680035306.01 | MsG0780040418.01 | 0.815189 | 1.050320e-51 | 7.191683e-49 |
| MsG0480019019.01 | MsG0780040418.01 | 0.825719 | 4.021066e-54 | 3.694681e-51 |
| MsG0480020242.01 | MsG0780040418.01 | 0.801109 | 1.051213e-48 | 4.978985e-46 |
| MsG0480020331.01 | MsG0780040418.01 | 0.828573 | 8.340046e-55 | 8.322362e-52 |
| MsG0480021077.01 | MsG0780040418.01 | -0.804539 | 2.058305e-49 | 1.063994e-46 |
| MsG0480022094.01 | MsG0780040418.01 | 0.804637 | 1.963161e-49 | 1.017408e-46 |
| MsG0480022115.01 | MsG0780040418.01 | 0.808425 | 3.117257e-50 | 1.781801e-47 |
| MsG0480022228.01 | MsG0780040418.01 | 0.814134 | 1.797859e-51 | 1.196473e-48 |
| MsG0480022877.01 | MsG0780040418.01 | 0.802802 | 4.719855e-49 | 2.333634e-46 |
| MsG0480023361.01 | MsG0780040418.01 | 0.840004 | 1.128864e-57 | 1.586697e-54 |
| MsG0480023465.01 | MsG0780040418.01 | 0.815501 | 8.950943e-52 | 6.182239e-49 |
| MsG0480023559.01 | MsG0780040418.01 | 0.821165 | 4.668043e-53 | 3.769013e-50 |
| MsG0480023755.01 | MsG0780040418.01 | 0.802717 | 4.913018e-49 | 2.423911e-46 |
| MsG0580024157.01 | MsG0780040418.01 | 0.807484 | 4.941096e-50 | 2.755489e-47 |
| MsG0580024191.01 | MsG0780040418.01 | 0.807024 | 6.187199e-50 | 3.409251e-47 |
| MsG0580024618.01 | MsG0780040418.01 | 0.802823 | 4.672049e-49 | 2.311354e-46 |
| MsG0580025651.01 | MsG0780040418.01 | 0.822606 | 2.165532e-53 | 1.821445e-50 |
| MsG0380015118.01 | MsG0780040418.01 | 0.851543 | 8.287567e-61 | 1.683157e-57 |
| MsG0380015831.01 | MsG0780040418.01 | 0.811743 | 6.010451e-51 | 3.750564e-48 |
| MsG0380015893.01 | MsG0780040418.01 | 0.831957 | 1.243128e-55 | 1.370021e-52 |
| MsG0380016483.01 | MsG0780040418.01 | 0.818372 | 2.029258e-52 | 1.516314e-49 |
| MsG0380016985.01 | MsG0780040418.01 | 0.804454 | 2.143883e-49 | 1.105816e-46 |
| MsG0380017431.01 | MsG0780040418.01 | 0.834405 | 3.054711e-56 | 3.621663e-53 |
| MsG0380017631.01 | MsG0780040418.01 | 0.801102 | 1.055120e-48 | 4.996616e-46 |
| MsG0580027441.01 | MsG0780040418.01 | 0.827944 | 1.182854e-54 | 1.158884e-51 |
| MsG0580029258.01 | MsG0780040418.01 | 0.817049 | 4.033941e-52 | 2.906703e-49 |
| MsG0580029588.01 | MsG0780040418.01 | 0.815310 | 9.873070e-52 | 6.783030e-49 |
| MsG0580029592.01 | MsG0780040418.01 | 0.807202 | 5.671301e-50 | 3.139548e-47 |
| MsG0580029801.01 | MsG0780040418.01 | 0.818007 | 2.453226e-52 | 1.814656e-49 |
| MsG0580030204.01 | MsG0780040418.01 | 0.801783 | 7.650712e-49 | 3.685655e-46 |
| MsG0280006759.01 | MsG0780040418.01 | 0.801207 | 1.003835e-48 | 4.766116e-46 |
| MsG0280007372.01 | MsG0780040418.01 | 0.829004 | 6.560220e-55 | 6.628467e-52 |
| MsG0280007440.01 | MsG0780040418.01 | 0.887316 | 1.588651e-72 | 1.175532e-68 |
| MsG0280007609.01 | MsG0780040418.01 | 0.829272 | 5.648267e-55 | 5.753744e-52 |
| MsG0280007710.01 | MsG0780040418.01 | 0.823874 | 1.095042e-53 | 9.546046e-51 |
| MsG0280008004.01 | MsG0780040418.01 | 0.833446 | 5.309009e-56 | 6.115709e-53 |
| MsG0280008104.01 | MsG0780040418.01 | 0.800699 | 1.274835e-48 | 5.975235e-46 |
| MsG0280008239.01 | MsG0780040418.01 | 0.846970 | 1.553812e-59 | 2.720683e-56 |
| MsG0280008283.01 | MsG0780040418.01 | 0.806062 | 9.873606e-50 | 5.308047e-47 |
| MsG0280008614.01 | MsG0780040418.01 | 0.834166 | 3.506610e-56 | 4.127055e-53 |
| MsG0280009141.01 | MsG0780040418.01 | 0.813834 | 2.093991e-51 | 1.382200e-48 |
| MsG0280009165.01 | MsG0780040418.01 | 0.814417 | 1.557103e-51 | 1.044261e-48 |
| MsG0280009375.01 | MsG0780040418.01 | 0.812827 | 3.484909e-51 | 2.238410e-48 |
| MsG0280010002.01 | MsG0780040418.01 | 0.813565 | 2.399930e-51 | 1.572684e-48 |
| MsG0280010170.01 | MsG0780040418.01 | 0.809318 | 2.007454e-50 | 1.174880e-47 |
| MsG0280010389.01 | MsG0780040418.01 | 0.801692 | 7.985685e-49 | 3.838111e-46 |
| MsG0680035854.01 | MsG0780040418.01 | 0.818171 | 2.252827e-52 | 1.673932e-49 |
| MsG0780036240.01 | MsG0780040418.01 | 0.840998 | 6.203694e-58 | 8.990764e-55 |
| MsG0780038443.01 | MsG0780040418.01 | 0.824386 | 8.302681e-54 | 7.342804e-51 |
| MsG0780038495.01 | MsG0780040418.01 | 0.801028 | 1.092034e-48 | 5.161930e-46 |
| MsG0780038937.01 | MsG0780040418.01 | 0.847961 | 8.300631e-60 | 1.500091e-56 |
| MsG0780039943.01 | MsG0780040418.01 | 0.802166 | 6.382906e-49 | 3.105069e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040418.01.T01 | MTR_7g490310 | 98.745 | 239 | 2 | 1 | 1 | 238 | 1 | 239 | 3.81e-175 | 481 |
| MsG0780040418.01.T01 | MTR_8g038620 | 75.000 | 156 | 38 | 1 | 1 | 156 | 1 | 155 | 2.29e-81 | 241 |
| MsG0780040418.01.T01 | MTR_3g015490 | 64.815 | 162 | 52 | 2 | 7 | 166 | 2 | 160 | 7.13e-68 | 206 |
| MsG0780040418.01.T01 | MTR_6g007460 | 49.048 | 210 | 45 | 3 | 1 | 157 | 3 | 203 | 3.75e-60 | 188 |
| MsG0780040418.01.T01 | MTR_5g036480 | 57.407 | 162 | 63 | 3 | 3 | 163 | 9 | 165 | 1.43e-59 | 188 |
| MsG0780040418.01.T01 | MTR_1g049100 | 63.043 | 138 | 44 | 2 | 8 | 145 | 7 | 137 | 3.97e-55 | 175 |
| MsG0780040418.01.T01 | MTR_3g078613 | 53.503 | 157 | 64 | 2 | 4 | 160 | 18 | 165 | 4.85e-54 | 172 |
| MsG0780040418.01.T01 | MTR_4g106590 | 54.601 | 163 | 64 | 3 | 4 | 165 | 21 | 174 | 5.13e-54 | 173 |
| MsG0780040418.01.T01 | MTR_3g088630 | 58.667 | 150 | 50 | 4 | 9 | 148 | 22 | 169 | 3.46e-53 | 172 |
| MsG0780040418.01.T01 | MTR_3g078613 | 53.165 | 158 | 64 | 3 | 4 | 160 | 18 | 166 | 2.93e-52 | 168 |
| MsG0780040418.01.T01 | MTR_3g093860 | 59.091 | 132 | 47 | 2 | 10 | 141 | 19 | 143 | 1.27e-49 | 160 |
| MsG0780040418.01.T01 | MTR_4g051330 | 68.493 | 73 | 21 | 1 | 96 | 166 | 77 | 149 | 8.53e-27 | 101 |
| MsG0780040418.01.T01 | MTR_8g024260 | 32.022 | 178 | 102 | 2 | 11 | 187 | 38 | 197 | 4.09e-19 | 86.3 |
| MsG0780040418.01.T01 | MTR_4g061360 | 34.307 | 137 | 72 | 3 | 11 | 147 | 91 | 209 | 3.99e-18 | 83.6 |
| MsG0780040418.01.T01 | MTR_3g092780 | 28.834 | 163 | 89 | 4 | 9 | 162 | 56 | 200 | 4.09e-16 | 77.4 |
| MsG0780040418.01.T01 | MTR_3g092780 | 28.834 | 163 | 89 | 4 | 9 | 162 | 56 | 200 | 4.34e-16 | 77.4 |
| MsG0780040418.01.T01 | MTR_3g092780 | 28.659 | 164 | 89 | 4 | 9 | 162 | 56 | 201 | 5.04e-16 | 77.0 |
| MsG0780040418.01.T01 | MTR_3g092780 | 28.659 | 164 | 89 | 4 | 9 | 162 | 56 | 201 | 5.87e-16 | 77.0 |
| MsG0780040418.01.T01 | MTR_1g067110 | 30.657 | 137 | 77 | 2 | 11 | 147 | 87 | 205 | 2.86e-15 | 75.1 |
| MsG0780040418.01.T01 | MTR_1g067110 | 30.657 | 137 | 77 | 2 | 11 | 147 | 87 | 205 | 3.06e-15 | 75.1 |
| MsG0780040418.01.T01 | MTR_7g118260 | 28.873 | 142 | 83 | 1 | 11 | 152 | 16 | 139 | 8.44e-15 | 73.6 |
| MsG0780040418.01.T01 | MTR_7g118260 | 29.197 | 137 | 79 | 1 | 11 | 147 | 16 | 134 | 1.44e-14 | 72.8 |
| MsG0780040418.01.T01 | MTR_2g450070 | 32.370 | 173 | 86 | 6 | 11 | 173 | 24 | 175 | 3.48e-13 | 68.9 |
| MsG0780040418.01.T01 | MTR_1g032570 | 29.333 | 150 | 84 | 3 | 7 | 156 | 13 | 140 | 3.58e-13 | 68.9 |
| MsG0780040418.01.T01 | MTR_2g450070 | 31.214 | 173 | 88 | 5 | 11 | 173 | 24 | 175 | 3.94e-13 | 68.6 |
| MsG0780040418.01.T01 | MTR_3g086100 | 24.870 | 193 | 123 | 3 | 11 | 202 | 19 | 190 | 8.85e-13 | 67.8 |
| MsG0780040418.01.T01 | MTR_7g117705 | 33.813 | 139 | 72 | 4 | 11 | 149 | 11 | 129 | 2.39e-12 | 66.2 |
| MsG0780040418.01.T01 | MTR_1g013180 | 28.235 | 170 | 94 | 4 | 11 | 173 | 162 | 310 | 3.18e-12 | 65.9 |
| MsG0780040418.01.T01 | MTR_1g013170 | 30.935 | 139 | 75 | 3 | 11 | 149 | 11 | 128 | 3.20e-12 | 65.9 |
| MsG0780040418.01.T01 | MTR_4g131580 | 29.932 | 147 | 80 | 3 | 11 | 155 | 23 | 148 | 6.48e-12 | 65.1 |
| MsG0780040418.01.T01 | MTR_8g079940 | 26.174 | 149 | 89 | 2 | 4 | 152 | 24 | 151 | 9.01e-12 | 64.7 |
| MsG0780040418.01.T01 | MTR_4g108880 | 25.676 | 148 | 92 | 1 | 2 | 149 | 26 | 155 | 1.64e-11 | 63.9 |
| MsG0780040418.01.T01 | MTR_3g037390 | 26.174 | 149 | 90 | 3 | 2 | 149 | 17 | 146 | 1.71e-11 | 63.9 |
| MsG0780040418.01.T01 | MTR_8g032710 | 25.664 | 226 | 142 | 6 | 11 | 232 | 23 | 226 | 2.06e-11 | 63.5 |
| MsG0780040418.01.T01 | MTR_3g106220 | 29.730 | 148 | 83 | 3 | 11 | 158 | 14 | 140 | 2.76e-11 | 63.2 |
| MsG0780040418.01.T01 | MTR_4g131570 | 30.612 | 147 | 79 | 3 | 11 | 155 | 23 | 148 | 3.94e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040418.01.T01 | AT3G57040 | 65.021 | 243 | 71 | 6 | 1 | 238 | 1 | 234 | 1.14e-100 | 292 |
| MsG0780040418.01.T01 | AT3G57040 | 65.021 | 243 | 71 | 6 | 1 | 238 | 1 | 234 | 1.14e-100 | 292 |
| MsG0780040418.01.T01 | AT2G41310 | 60.504 | 238 | 81 | 5 | 1 | 238 | 1 | 225 | 2.10e-91 | 268 |
| MsG0780040418.01.T01 | AT1G59940 | 58.571 | 140 | 49 | 2 | 8 | 147 | 32 | 162 | 2.11e-55 | 177 |
| MsG0780040418.01.T01 | AT1G10470 | 57.718 | 149 | 53 | 3 | 8 | 155 | 19 | 158 | 3.06e-55 | 177 |
| MsG0780040418.01.T01 | AT1G10470 | 57.718 | 149 | 53 | 3 | 8 | 155 | 33 | 172 | 3.29e-55 | 177 |
| MsG0780040418.01.T01 | AT3G48100 | 56.164 | 146 | 56 | 2 | 3 | 148 | 19 | 156 | 1.15e-54 | 174 |
| MsG0780040418.01.T01 | AT3G56380 | 56.338 | 142 | 54 | 1 | 4 | 145 | 15 | 148 | 4.56e-54 | 171 |
| MsG0780040418.01.T01 | AT1G59940 | 58.571 | 140 | 49 | 2 | 8 | 147 | 124 | 254 | 1.69e-53 | 175 |
| MsG0780040418.01.T01 | AT1G19050 | 58.519 | 135 | 47 | 1 | 8 | 142 | 23 | 148 | 1.14e-52 | 169 |
| MsG0780040418.01.T01 | AT1G74890 | 60.000 | 135 | 45 | 2 | 8 | 142 | 17 | 142 | 1.67e-52 | 169 |
| MsG0780040418.01.T01 | AT3G56380 | 55.944 | 143 | 54 | 2 | 4 | 145 | 15 | 149 | 2.81e-52 | 167 |
| MsG0780040418.01.T01 | AT2G40670 | 54.483 | 145 | 58 | 2 | 6 | 149 | 26 | 163 | 3.41e-52 | 167 |
| MsG0780040418.01.T01 | AT5G62920 | 57.143 | 140 | 51 | 1 | 9 | 148 | 25 | 155 | 3.72e-52 | 167 |
| MsG0780040418.01.T01 | AT2G40670 | 54.110 | 146 | 58 | 3 | 6 | 149 | 26 | 164 | 1.94e-50 | 162 |
| MsG0780040418.01.T01 | AT2G07440 | 48.951 | 143 | 58 | 5 | 96 | 238 | 9 | 136 | 1.38e-32 | 115 |
| MsG0780040418.01.T01 | AT1G10470 | 58.065 | 62 | 25 | 1 | 95 | 155 | 35 | 96 | 3.40e-17 | 77.0 |
| MsG0780040418.01.T01 | AT5G24470 | 30.216 | 139 | 79 | 2 | 9 | 147 | 50 | 170 | 3.19e-15 | 74.7 |
| MsG0780040418.01.T01 | AT5G02810 | 32.117 | 137 | 75 | 2 | 11 | 147 | 80 | 198 | 4.94e-15 | 74.3 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.09e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.09e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.09e-14 | 71.6 |
| MsG0780040418.01.T01 | AT2G46790 | 28.276 | 145 | 85 | 3 | 9 | 152 | 37 | 163 | 3.33e-14 | 71.6 |
| MsG0780040418.01.T01 | AT2G46790 | 28.276 | 145 | 85 | 3 | 9 | 152 | 37 | 163 | 3.39e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.53e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.53e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 3.53e-14 | 71.6 |
| MsG0780040418.01.T01 | AT5G60100 | 32.117 | 137 | 75 | 2 | 11 | 147 | 66 | 184 | 4.18e-14 | 71.6 |
| MsG0780040418.01.T01 | AT2G25180 | 31.429 | 140 | 75 | 2 | 11 | 150 | 19 | 137 | 6.42e-14 | 70.9 |
| MsG0780040418.01.T01 | AT1G67710 | 29.167 | 144 | 81 | 2 | 9 | 152 | 11 | 133 | 1.76e-13 | 69.7 |
| MsG0780040418.01.T01 | AT5G07210 | 32.836 | 134 | 68 | 3 | 8 | 141 | 15 | 126 | 1.91e-13 | 69.7 |
| MsG0780040418.01.T01 | AT4G31920 | 29.927 | 137 | 75 | 2 | 11 | 147 | 19 | 134 | 3.67e-12 | 65.9 |
| MsG0780040418.01.T01 | AT1G49190 | 29.730 | 148 | 79 | 3 | 7 | 150 | 28 | 154 | 5.72e-12 | 65.5 |
| MsG0780040418.01.T01 | AT1G49190 | 29.730 | 148 | 79 | 3 | 7 | 150 | 28 | 154 | 1.54e-11 | 63.9 |
| MsG0780040418.01.T01 | AT5G61380 | 25.000 | 148 | 93 | 1 | 2 | 149 | 12 | 141 | 2.70e-11 | 63.2 |
| MsG0780040418.01.T01 | AT5G07210 | 30.986 | 142 | 68 | 4 | 8 | 141 | 15 | 134 | 5.97e-11 | 62.4 |
Find 62 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCCTTAGTTGGAGAAAA+TGG | 0.126733 | 7:+77278120 | MsG0780040418.01.T01:exon |
| TTTGGAAAATTTGCAAGATT+TGG | 0.165434 | 7:+77277870 | MsG0780040418.01.T01:five_prime_UTR |
| TTTAAATCTGATAGCCTTAC+AGG | 0.185020 | 7:-77279800 | None:intergenic |
| GGAAATACAGATGGTGTATT+TGG | 0.194626 | 7:-77278586 | None:intergenic |
| GCTTTGTGGGATGTGGATTT+TGG | 0.218342 | 7:+77277914 | MsG0780040418.01.T01:five_prime_UTR |
| TTGATTTGGATCTTTCAATT+TGG | 0.240297 | 7:-77279849 | None:intergenic |
| AAGGATTAAAAGAAGGTAAA+TGG | 0.265428 | 7:-77278105 | None:intergenic |
| ACTCTTTCTCTTGTTATTGT+TGG | 0.284458 | 7:-77280029 | None:intergenic |
| TTGGAAAATTTGCAAGATTT+GGG | 0.299967 | 7:+77277871 | MsG0780040418.01.T01:five_prime_UTR |
| TATTTCCAGGAAATGTTTAC+AGG | 0.304991 | 7:-77280255 | None:intergenic |
| TGTTCCCTGTAAACATTTCC+TGG | 0.307533 | 7:+77280250 | MsG0780040418.01.T01:three_prime_UTR |
| CATGTAATTCAAGATCAATT+TGG | 0.308343 | 7:+77277852 | MsG0780040418.01.T01:five_prime_UTR |
| AGAAGCAAAGAAATGGAAAA+TGG | 0.314441 | 7:-77278063 | None:intergenic |
| AGAGTCACAGTTTCATGTTT+TGG | 0.318671 | 7:+77278153 | MsG0780040418.01.T01:CDS |
| GCAAGATTTGGGATGAAATC+TGG | 0.334593 | 7:+77277882 | MsG0780040418.01.T01:five_prime_UTR |
| GCAGTTACTACAGTTGATTC+TGG | 0.344676 | 7:+77278514 | MsG0780040418.01.T01:intron |
| ACTTGGGTGTTGGTTTATAT+AGG | 0.347253 | 7:+77280203 | MsG0780040418.01.T01:three_prime_UTR |
| AATTGGAAGGGGATATTTCC+AGG | 0.353288 | 7:-77280268 | None:intergenic |
| GAAATACAGATGGTGTATTT+GGG | 0.355026 | 7:-77278585 | None:intergenic |
| ATGTGCCTTCAAGAATTAAT+AGG | 0.368999 | 7:+77279635 | MsG0780040418.01.T01:CDS |
| AACTATACCTGATGATTGTT+AGG | 0.391930 | 7:-77278607 | None:intergenic |
| CAAATTGATCTTGAATTACA+TGG | 0.393419 | 7:-77277851 | None:intergenic |
| TACTGTATGCCTGGCATGAC+AGG | 0.404554 | 7:+77278795 | MsG0780040418.01.T01:CDS |
| TATTACCTATTAATTCTTGA+AGG | 0.405802 | 7:-77279640 | None:intergenic |
| CTGGTCGGATCTTGCTTTGT+GGG | 0.415540 | 7:+77277901 | MsG0780040418.01.T01:five_prime_UTR |
| TCTGGTCGGATCTTGCTTTG+TGG | 0.421782 | 7:+77277900 | MsG0780040418.01.T01:five_prime_UTR |
| AATCCTTAGTTGGAGAAAAT+GGG | 0.423958 | 7:+77278121 | MsG0780040418.01.T01:exon |
| TTATGGGAGGAATATGAGAT+TGG | 0.426769 | 7:-77277967 | None:intergenic |
| TTGGTTTATATAGGCTCTAT+AGG | 0.429787 | 7:+77280212 | MsG0780040418.01.T01:three_prime_UTR |
| ACCCTTGAGGAAAGAAAAGA+TGG | 0.432860 | 7:-77278005 | None:intergenic |
| TTAAATATTAACTTGGGTGT+TGG | 0.433869 | 7:+77280193 | MsG0780040418.01.T01:three_prime_UTR |
| AAGTGAAAGAAGCAAAGAAA+TGG | 0.436899 | 7:-77278070 | None:intergenic |
| GGATCTTGCTTTGTGGGATG+TGG | 0.439185 | 7:+77277907 | MsG0780040418.01.T01:five_prime_UTR |
| CTCAAAACATCTTCATATCA+AGG | 0.455916 | 7:+77278220 | MsG0780040418.01.T01:CDS |
| TTGTATGATGATAAATCATT+TGG | 0.463555 | 7:+77280116 | MsG0780040418.01.T01:exon |
| GTGGCTATGCCACTGTATCT+TGG | 0.467016 | 7:-77280091 | None:intergenic |
| TCCAACTAAGGATTAAAAGA+AGG | 0.477610 | 7:-77278112 | None:intergenic |
| TGTATTTCCTAACAATCATC+AGG | 0.478134 | 7:+77278600 | MsG0780040418.01.T01:CDS |
| AAATCATAGCCTGTCATGCC+AGG | 0.488050 | 7:-77278804 | None:intergenic |
| TATCAAATGTAACAGATGCT+TGG | 0.497655 | 7:+77279748 | MsG0780040418.01.T01:intron |
| TACAGTTGATTCTGGTAGCA+AGG | 0.501635 | 7:+77278522 | MsG0780040418.01.T01:CDS |
| TTGATGACAGCATCATAGAT+AGG | 0.505605 | 7:+77278179 | MsG0780040418.01.T01:CDS |
| TCATATGAAACAAAATTGGA+AGG | 0.508230 | 7:-77280281 | None:intergenic |
| ATAACAGATTACTGTATGCC+TGG | 0.512220 | 7:+77278786 | MsG0780040418.01.T01:CDS |
| CATATGAAACAAAATTGGAA+GGG | 0.522607 | 7:-77280280 | None:intergenic |
| CAAATGTAACAGATGCTTGG+AGG | 0.523574 | 7:+77279751 | MsG0780040418.01.T01:intron |
| TACAGATGGTGTATTTGGGT+TGG | 0.527443 | 7:-77278581 | None:intergenic |
| TGATTTGCTTAAGAAAATCA+AGG | 0.528385 | 7:+77278821 | MsG0780040418.01.T01:CDS |
| ATATGAAACAAAATTGGAAG+GGG | 0.538359 | 7:-77280279 | None:intergenic |
| TGTTCTTCTCTTGACCCTTG+AGG | 0.553342 | 7:-77278018 | None:intergenic |
| TCAGATGACATAATCACCAC+TGG | 0.584254 | 7:-77279610 | None:intergenic |
| TGTAACAGATGCTTGGAGGA+AGG | 0.588489 | 7:+77279755 | MsG0780040418.01.T01:intron |
| CCCTTGAGGAAAGAAAAGAT+GGG | 0.594385 | 7:-77278004 | None:intergenic |
| TTAGTTGGAGAAAATGGGAA+TGG | 0.609092 | 7:+77278126 | MsG0780040418.01.T01:exon |
| ATTTCCAGGAAATGTTTACA+GGG | 0.615752 | 7:-77280254 | None:intergenic |
| TAGATAGGAAGCTTATTGAG+AGG | 0.630074 | 7:+77278194 | MsG0780040418.01.T01:CDS |
| CAATAACAAGAGAAAGAGTG+TGG | 0.644460 | 7:+77280033 | MsG0780040418.01.T01:CDS |
| GATTTGGGATGAAATCTGGT+CGG | 0.673753 | 7:+77277886 | MsG0780040418.01.T01:five_prime_UTR |
| ATCATTGAGAAACATACCAG+TGG | 0.696105 | 7:+77279594 | MsG0780040418.01.T01:CDS |
| GATTTATCATCATACAACAG+TGG | 0.696351 | 7:-77280110 | None:intergenic |
| AGAACAAGACCAAGATACAG+TGG | 0.701894 | 7:+77280082 | MsG0780040418.01.T01:CDS |
| TGATTGTTAGGAAATACAGA+TGG | 0.757940 | 7:-77278595 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGAAATAAAATGAAATA+AGG | - | Chr7:77279678-77279697 | None:intergenic | 10.0% |
| !! | TTAAACAATATGTCTTTAAA+TGG | + | Chr7:77279229-77279248 | MsG0780040418.01.T01:intron | 15.0% |
| !!! | AGATCAAAAAAATTACTTTT+TGG | + | Chr7:77279099-77279118 | MsG0780040418.01.T01:intron | 15.0% |
| !!! | ATTTTCATATGAAACAAAAT+TGG | - | Chr7:77280288-77280307 | None:intergenic | 15.0% |
| !!! | TATGTTAATGTTTTTCTTTT+TGG | + | Chr7:77278389-77278408 | MsG0780040418.01.T01:intron | 15.0% |
| !! | ACAACATTATCATAGTATAA+TGG | - | Chr7:77278318-77278337 | None:intergenic | 20.0% |
| !! | ACTATAGATTCATTCTAATT+TGG | + | Chr7:77279288-77279307 | MsG0780040418.01.T01:intron | 20.0% |
| !! | ATCCTAAAAAAATATTCACT+AGG | + | Chr7:77277759-77277778 | MsG0780040418.01.T01:five_prime_UTR | 20.0% |
| !! | TATAATTAAAATGACCAAAG+TGG | - | Chr7:77279704-77279723 | None:intergenic | 20.0% |
| !! | TATTACCTATTAATTCTTGA+AGG | - | Chr7:77279643-77279662 | None:intergenic | 20.0% |
| !! | TTAAAGTGGACAATAAATAT+TGG | - | Chr7:77278888-77278907 | None:intergenic | 20.0% |
| !! | TTGTATGATGATAAATCATT+TGG | + | Chr7:77280116-77280135 | MsG0780040418.01.T01:exon | 20.0% |
| !!! | AAAAGATTTTGTTTCCAAAA+AGG | + | Chr7:77279431-77279450 | MsG0780040418.01.T01:intron | 20.0% |
| !!! | AAAGATTTTGTTTCCAAAAA+GGG | + | Chr7:77279432-77279451 | MsG0780040418.01.T01:intron | 20.0% |
| !!! | ATCCTAGTGAATATTTTTTT+AGG | - | Chr7:77277764-77277783 | None:intergenic | 20.0% |
| !!! | CTTTTTCAACTTTATAATGT+TGG | + | Chr7:77278693-77278712 | MsG0780040418.01.T01:intron | 20.0% |
| !!! | GGTTTATTTTTTGTGTTTAT+GGG | - | Chr7:77277986-77278005 | None:intergenic | 20.0% |
| !!! | TACCATGTTAATGTTTTTTT+TGG | + | Chr7:77278356-77278375 | MsG0780040418.01.T01:intron | 20.0% |
| !!! | TTATTTCTATTTTTCCACTT+TGG | + | Chr7:77279687-77279706 | MsG0780040418.01.T01:intron | 20.0% |
| ! | AAGGATTAAAAGAAGGTAAA+TGG | - | Chr7:77278108-77278127 | None:intergenic | 25.0% |
| ! | ACATGATCAATAATTGTTTC+AGG | - | Chr7:77279030-77279049 | None:intergenic | 25.0% |
| ! | ATATGAAACAAAATTGGAAG+GGG | - | Chr7:77280282-77280301 | None:intergenic | 25.0% |
| ! | CAAATTGATCTTGAATTACA+TGG | - | Chr7:77277854-77277873 | None:intergenic | 25.0% |
| ! | CATATGAAACAAAATTGGAA+GGG | - | Chr7:77280283-77280302 | None:intergenic | 25.0% |
| ! | CATGTAATTCAAGATCAATT+TGG | + | Chr7:77277852-77277871 | MsG0780040418.01.T01:five_prime_UTR | 25.0% |
| ! | CTATAAAACACAAAAATCCA+AGG | - | Chr7:77278745-77278764 | None:intergenic | 25.0% |
| ! | GTCCAAAAAAAACATTAACA+TGG | - | Chr7:77278361-77278380 | None:intergenic | 25.0% |
| ! | TAACAGAATGAATGAATGAA+TGG | + | Chr7:77278472-77278491 | MsG0780040418.01.T01:intron | 25.0% |
| ! | TCATATGAAACAAAATTGGA+AGG | - | Chr7:77280284-77280303 | None:intergenic | 25.0% |
| ! | TCATCAGATTATGCTATATT+TGG | - | Chr7:77278259-77278278 | None:intergenic | 25.0% |
| ! | TTAAAAGATATAGATGAGTC+AGG | - | Chr7:77278865-77278884 | None:intergenic | 25.0% |
| ! | TTCAAATGGTTAATGATCTT+TGG | + | Chr7:77278963-77278982 | MsG0780040418.01.T01:intron | 25.0% |
| ! | TTGCGAACATAAAATTTAGT+AGG | + | Chr7:77279256-77279275 | MsG0780040418.01.T01:intron | 25.0% |
| ! | TTGGAAAATTTGCAAGATTT+GGG | + | Chr7:77277871-77277890 | MsG0780040418.01.T01:five_prime_UTR | 25.0% |
| ! | TTTGGAAAATTTGCAAGATT+TGG | + | Chr7:77277870-77277889 | MsG0780040418.01.T01:five_prime_UTR | 25.0% |
| !! | ATGGATTATGTGTTTAAGAA+AGG | - | Chr7:77278299-77278318 | None:intergenic | 25.0% |
| !! | CTTGGATTTTTGTGTTTTAT+AGG | + | Chr7:77278743-77278762 | MsG0780040418.01.T01:intron | 25.0% |
| !! | TTAAATATTAACTTGGGTGT+TGG | + | Chr7:77280193-77280212 | MsG0780040418.01.T01:three_prime_UTR | 25.0% |
| !! | TTTTTGTGTTTTATAGGAAG+TGG | + | Chr7:77278749-77278768 | MsG0780040418.01.T01:intron | 25.0% |
| !!! | CATAATCTGATGAACTTTTT+TGG | + | Chr7:77278266-77278285 | MsG0780040418.01.T01:intron | 25.0% |
| !!! | GGGTTTATTTTTTGTGTTTA+TGG | - | Chr7:77277987-77278006 | None:intergenic | 25.0% |
| !!! | TAATGTTGGATTGTTTTTTC+TGG | + | Chr7:77278707-77278726 | MsG0780040418.01.T01:intron | 25.0% |
| !!! | TGATTTGCTTAAGAAAATCA+AGG | + | Chr7:77278821-77278840 | MsG0780040418.01.T01:CDS | 25.0% |
| !!! | TTATTTTTTGTGTTTATGGG+AGG | - | Chr7:77277983-77278002 | None:intergenic | 25.0% |
| !!! | TTGATTTGGATCTTTCAATT+TGG | - | Chr7:77279852-77279871 | None:intergenic | 25.0% |
| !!! | TTTTGTTCTGTTTCTTGATT+TGG | - | Chr7:77279866-77279885 | None:intergenic | 25.0% |
| !!! | TTTTTTGATCTCAGACAAAA+GGG | - | Chr7:77279090-77279109 | None:intergenic | 25.0% |
| !!! | TTTTTTTGATCTCAGACAAA+AGG | - | Chr7:77279091-77279110 | None:intergenic | 25.0% |
| AACTACGTTGTTTGAGAAAA+GGG | - | Chr7:77278940-77278959 | None:intergenic | 30.0% | |
| AACTATACCTGATGATTGTT+AGG | - | Chr7:77278610-77278629 | None:intergenic | 30.0% | |
| AAGAAAATCAAGGTAAGCTT+TGG | + | Chr7:77278831-77278850 | MsG0780040418.01.T01:intron | 30.0% | |
| AAGATTCTCTCTGATATTAC+AGG | + | Chr7:77279564-77279583 | MsG0780040418.01.T01:intron | 30.0% | |
| AAGTGAAAGAAGCAAAGAAA+TGG | - | Chr7:77278073-77278092 | None:intergenic | 30.0% | |
| AATCCTTAGTTGGAGAAAAT+GGG | + | Chr7:77278121-77278140 | MsG0780040418.01.T01:exon | 30.0% | |
| ACAACGTAGTTAGATTCAAA+TGG | + | Chr7:77278949-77278968 | MsG0780040418.01.T01:intron | 30.0% | |
| AGAAGCAAAGAAATGGAAAA+TGG | - | Chr7:77278066-77278085 | None:intergenic | 30.0% | |
| ATGTGCCTTCAAGAATTAAT+AGG | + | Chr7:77279635-77279654 | MsG0780040418.01.T01:CDS | 30.0% | |
| ATTGCTGAAAGTTATCAACT+TGG | + | Chr7:77279320-77279339 | MsG0780040418.01.T01:intron | 30.0% | |
| ATTTCCAGGAAATGTTTACA+GGG | - | Chr7:77280257-77280276 | None:intergenic | 30.0% | |
| CTCAAAACATCTTCATATCA+AGG | + | Chr7:77278220-77278239 | MsG0780040418.01.T01:CDS | 30.0% | |
| GAAATACAGATGGTGTATTT+GGG | - | Chr7:77278588-77278607 | None:intergenic | 30.0% | |
| GAGAGAATCTTATAAGTCTT+TGG | - | Chr7:77279555-77279574 | None:intergenic | 30.0% | |
| GATTTATCATCATACAACAG+TGG | - | Chr7:77280113-77280132 | None:intergenic | 30.0% | |
| TAACTACGTTGTTTGAGAAA+AGG | - | Chr7:77278941-77278960 | None:intergenic | 30.0% | |
| TAATCCTTAGTTGGAGAAAA+TGG | + | Chr7:77278120-77278139 | MsG0780040418.01.T01:exon | 30.0% | |
| TATCAAATGTAACAGATGCT+TGG | + | Chr7:77279748-77279767 | MsG0780040418.01.T01:intron | 30.0% | |
| TATTTCCAGGAAATGTTTAC+AGG | - | Chr7:77280258-77280277 | None:intergenic | 30.0% | |
| TCCAACTAAGGATTAAAAGA+AGG | - | Chr7:77278115-77278134 | None:intergenic | 30.0% | |
| TGATTGTTAGGAAATACAGA+TGG | - | Chr7:77278598-77278617 | None:intergenic | 30.0% | |
| TGTATTTCCTAACAATCATC+AGG | + | Chr7:77278600-77278619 | MsG0780040418.01.T01:CDS | 30.0% | |
| TTGGTATAAGTCAAATCGAT+CGG | + | Chr7:77278982-77279001 | MsG0780040418.01.T01:intron | 30.0% | |
| TTGGTTTATATAGGCTCTAT+AGG | + | Chr7:77280212-77280231 | MsG0780040418.01.T01:three_prime_UTR | 30.0% | |
| ! | ACCTTCTTTTAATCCTTAGT+TGG | + | Chr7:77278111-77278130 | MsG0780040418.01.T01:five_prime_UTR | 30.0% |
| ! | CATATCAAGGTAACTTTTGA+GGG | + | Chr7:77278233-77278252 | MsG0780040418.01.T01:intron | 30.0% |
| ! | TCATATCAAGGTAACTTTTG+AGG | + | Chr7:77278232-77278251 | MsG0780040418.01.T01:intron | 30.0% |
| ! | TTTAAATCTGATAGCCTTAC+AGG | - | Chr7:77279803-77279822 | None:intergenic | 30.0% |
| ! | TTTTCCACTGAAAACAAATC+AGG | + | Chr7:77279394-77279413 | MsG0780040418.01.T01:intron | 30.0% |
| !! | ACTCTTTCTCTTGTTATTGT+TGG | - | Chr7:77280032-77280051 | None:intergenic | 30.0% |
| !! | TTACAAAAGTATGCCCTTTT+TGG | - | Chr7:77279448-77279467 | None:intergenic | 30.0% |
| !! | TTTAACCATCCAGTTTTTAG+AGG | + | Chr7:77279122-77279141 | MsG0780040418.01.T01:intron | 30.0% |
| !!! | AATTTGGTTTTCTTCATGTG+AGG | - | Chr7:77279836-77279855 | None:intergenic | 30.0% |
| !!! | TGGACTTTTTGTTTTCACAA+TGG | + | Chr7:77278492-77278511 | MsG0780040418.01.T01:intron | 30.0% |
| AATCGAAATCGAATTCTGGT+TGG | - | Chr7:77279205-77279224 | None:intergenic | 35.0% | |
| AGATATAGATGAGTCAGGAA+TGG | - | Chr7:77278860-77278879 | None:intergenic | 35.0% | |
| ATAACAGATTACTGTATGCC+TGG | + | Chr7:77278786-77278805 | MsG0780040418.01.T01:CDS | 35.0% | |
| ATCATTGAGAAACATACCAG+TGG | + | Chr7:77279594-77279613 | MsG0780040418.01.T01:CDS | 35.0% | |
| CAATAACAAGAGAAAGAGTG+TGG | + | Chr7:77280033-77280052 | MsG0780040418.01.T01:CDS | 35.0% | |
| GAGAAATCGAAATCGAATTC+TGG | - | Chr7:77279209-77279228 | None:intergenic | 35.0% | |
| GCTAGAAAGAGTGATTAAAG+TGG | - | Chr7:77278902-77278921 | None:intergenic | 35.0% | |
| GGAAATACAGATGGTGTATT+TGG | - | Chr7:77278589-77278608 | None:intergenic | 35.0% | |
| TAGATAGGAAGCTTATTGAG+AGG | + | Chr7:77278194-77278213 | MsG0780040418.01.T01:CDS | 35.0% | |
| TTAGTTGGAGAAAATGGGAA+TGG | + | Chr7:77278126-77278145 | MsG0780040418.01.T01:exon | 35.0% | |
| TTATGGGAGGAATATGAGAT+TGG | - | Chr7:77277970-77277989 | None:intergenic | 35.0% | |
| ! | AGAGTCACAGTTTCATGTTT+TGG | + | Chr7:77278153-77278172 | MsG0780040418.01.T01:CDS | 35.0% |
| ! | AGTTTTTCTTGAAGCCTGTA+AGG | + | Chr7:77279786-77279805 | MsG0780040418.01.T01:CDS | 35.0% |
| ! | ATTCCCATTTTCTCCAACTA+AGG | - | Chr7:77278127-77278146 | None:intergenic | 35.0% |
| ! | TCTTATAAGTCTTTGGTTCC+AGG | - | Chr7:77279548-77279567 | None:intergenic | 35.0% |
| ! | TTGATGACAGCATCATAGAT+AGG | + | Chr7:77278179-77278198 | MsG0780040418.01.T01:CDS | 35.0% |
| ! | TTGTGTTTTATAGGAAGTGG+AGG | + | Chr7:77278752-77278771 | MsG0780040418.01.T01:intron | 35.0% |
| !! | ACTTGGGTGTTGGTTTATAT+AGG | + | Chr7:77280203-77280222 | MsG0780040418.01.T01:three_prime_UTR | 35.0% |
| !! | CTTTTCCTCTAAAAACTGGA+TGG | - | Chr7:77279130-77279149 | None:intergenic | 35.0% |
| !! | GACTCTTTTCCTCTAAAAAC+TGG | - | Chr7:77279134-77279153 | None:intergenic | 35.0% |
| !! | GGACTTGCTAATATGAAGTA+CGG | - | Chr7:77279069-77279088 | None:intergenic | 35.0% |
| !! | TCTGGAATTCTGAAATTCCT+TGG | + | Chr7:77278725-77278744 | MsG0780040418.01.T01:intron | 35.0% |
| !! | TGGAAAACTGAAAAGCATTC+AGG | - | Chr7:77279381-77279400 | None:intergenic | 35.0% |
| !!! | AGCAAGGCTTTAGAGTTTTT+GGG | + | Chr7:77278538-77278557 | MsG0780040418.01.T01:CDS | 35.0% |
| !!! | TAGCAAGGCTTTAGAGTTTT+TGG | + | Chr7:77278537-77278556 | MsG0780040418.01.T01:CDS | 35.0% |
| !!! | TGAACCTGATTTGTTTTCAG+TGG | - | Chr7:77279401-77279420 | None:intergenic | 35.0% |
| AATTGGAAGGGGATATTTCC+AGG | - | Chr7:77280271-77280290 | None:intergenic | 40.0% | |
| ACCCTTGAGGAAAGAAAAGA+TGG | - | Chr7:77278008-77278027 | None:intergenic | 40.0% | |
| AGAACAAGACCAAGATACAG+TGG | + | Chr7:77280082-77280101 | MsG0780040418.01.T01:CDS | 40.0% | |
| CAAATGTAACAGATGCTTGG+AGG | + | Chr7:77279751-77279770 | MsG0780040418.01.T01:intron | 40.0% | |
| CCCTTGAGGAAAGAAAAGAT+GGG | - | Chr7:77278007-77278026 | None:intergenic | 40.0% | |
| GCATTCAGGTGAATTATTGC+AGG | - | Chr7:77279367-77279386 | None:intergenic | 40.0% | |
| GGAAAAGAGTCTTTGCAATC+CGG | + | Chr7:77279143-77279162 | MsG0780040418.01.T01:intron | 40.0% | |
| TACAGATGGTGTATTTGGGT+TGG | - | Chr7:77278584-77278603 | None:intergenic | 40.0% | |
| TCAGATGACATAATCACCAC+TGG | - | Chr7:77279613-77279632 | None:intergenic | 40.0% | |
| TGTTCCCTGTAAACATTTCC+TGG | + | Chr7:77280250-77280269 | MsG0780040418.01.T01:three_prime_UTR | 40.0% | |
| TTTCAGGCATAGACCAAACT+CGG | - | Chr7:77279014-77279033 | None:intergenic | 40.0% | |
| ! | ACCCATCTTTTCTTTCCTCA+AGG | + | Chr7:77278003-77278022 | MsG0780040418.01.T01:five_prime_UTR | 40.0% |
| ! | CCCATCTTTTCTTTCCTCAA+GGG | + | Chr7:77278004-77278023 | MsG0780040418.01.T01:five_prime_UTR | 40.0% |
| ! | GATTTGGGATGAAATCTGGT+CGG | + | Chr7:77277886-77277905 | MsG0780040418.01.T01:five_prime_UTR | 40.0% |
| ! | GCAAGATTTGGGATGAAATC+TGG | + | Chr7:77277882-77277901 | MsG0780040418.01.T01:five_prime_UTR | 40.0% |
| ! | GCAGTTACTACAGTTGATTC+TGG | + | Chr7:77278514-77278533 | MsG0780040418.01.T01:intron | 40.0% |
| ! | TACAGTTGATTCTGGTAGCA+AGG | + | Chr7:77278522-77278541 | MsG0780040418.01.T01:CDS | 40.0% |
| AAATCATAGCCTGTCATGCC+AGG | - | Chr7:77278807-77278826 | None:intergenic | 45.0% | |
| AGTCTTTGCAATCCGGAGTT+CGG | + | Chr7:77279150-77279169 | MsG0780040418.01.T01:intron | 45.0% | |
| CGATCGGAAATATCCGAGTT+TGG | + | Chr7:77278998-77279017 | MsG0780040418.01.T01:intron | 45.0% | |
| TGTAACAGATGCTTGGAGGA+AGG | + | Chr7:77279755-77279774 | MsG0780040418.01.T01:intron | 45.0% | |
| TGTGCCACACTTATTCAACC+TGG | + | Chr7:77279527-77279546 | MsG0780040418.01.T01:intron | 45.0% | |
| TGTTCTTCTCTTGACCCTTG+AGG | - | Chr7:77278021-77278040 | None:intergenic | 45.0% | |
| ! | GCTTTGTGGGATGTGGATTT+TGG | + | Chr7:77277914-77277933 | MsG0780040418.01.T01:five_prime_UTR | 45.0% |
| ! | GGTTCCAGGTTGAATAAGTG+TGG | - | Chr7:77279534-77279553 | None:intergenic | 45.0% |
| ! | TTGTGGGATGTGGATTTTGG+TGG | + | Chr7:77277917-77277936 | MsG0780040418.01.T01:five_prime_UTR | 45.0% |
| !! | TGTGGGATGTGGATTTTGGT+GGG | + | Chr7:77277918-77277937 | MsG0780040418.01.T01:five_prime_UTR | 45.0% |
| !! | TAAAAATTAAATATTAACTT+GGG | + | Chr7:77280187-77280206 | MsG0780040418.01.T01:three_prime_UTR | 5.0% |
| !! | TTAAAAATTAAATATTAACT+TGG | + | Chr7:77280186-77280205 | MsG0780040418.01.T01:three_prime_UTR | 5.0% |
| !!! | TAATGTTTATTTATTTATTT+TGG | + | Chr7:77278425-77278444 | MsG0780040418.01.T01:intron | 5.0% |
| CTGGTCGGATCTTGCTTTGT+GGG | + | Chr7:77277901-77277920 | MsG0780040418.01.T01:five_prime_UTR | 50.0% | |
| CTTAATTCCCGACCGAACTC+CGG | - | Chr7:77279165-77279184 | None:intergenic | 50.0% | |
| GGATCTTGCTTTGTGGGATG+TGG | + | Chr7:77277907-77277926 | MsG0780040418.01.T01:five_prime_UTR | 50.0% | |
| GTGGCTATGCCACTGTATCT+TGG | - | Chr7:77280094-77280113 | None:intergenic | 50.0% | |
| TACTGTATGCCTGGCATGAC+AGG | + | Chr7:77278795-77278814 | MsG0780040418.01.T01:CDS | 50.0% | |
| TCTGGTCGGATCTTGCTTTG+TGG | + | Chr7:77277900-77277919 | MsG0780040418.01.T01:five_prime_UTR | 50.0% | |
| TTTGCAATCCGGAGTTCGGT+CGG | + | Chr7:77279154-77279173 | MsG0780040418.01.T01:intron | 50.0% | |
| TTGCAATCCGGAGTTCGGTC+GGG | + | Chr7:77279155-77279174 | MsG0780040418.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 77277759 | 77280331 | 77277759 | ID=MsG0780040418.01;Name=MsG0780040418.01 |
| Chr7 | mRNA | 77277759 | 77280331 | 77277759 | ID=MsG0780040418.01.T01;Parent=MsG0780040418.01;Name=MsG0780040418.01.T01;_AED=0.49;_eAED=0.49;_QI=380|1|1|1|1|1|5|208|238 |
| Chr7 | exon | 77277759 | 77278241 | 77277759 | ID=MsG0780040418.01.T01:exon:15266;Parent=MsG0780040418.01.T01 |
| Chr7 | exon | 77278518 | 77278621 | 77278518 | ID=MsG0780040418.01.T01:exon:15267;Parent=MsG0780040418.01.T01 |
| Chr7 | exon | 77278765 | 77278842 | 77278765 | ID=MsG0780040418.01.T01:exon:15268;Parent=MsG0780040418.01.T01 |
| Chr7 | exon | 77279586 | 77279656 | 77279586 | ID=MsG0780040418.01.T01:exon:15269;Parent=MsG0780040418.01.T01 |
| Chr7 | exon | 77279763 | 77280331 | 77279763 | ID=MsG0780040418.01.T01:exon:15270;Parent=MsG0780040418.01.T01 |
| Chr7 | five_prime_UTR | 77277759 | 77278138 | 77277759 | ID=MsG0780040418.01.T01:five_prime_utr;Parent=MsG0780040418.01.T01 |
| Chr7 | CDS | 77278139 | 77278241 | 77278139 | ID=MsG0780040418.01.T01:cds;Parent=MsG0780040418.01.T01 |
| Chr7 | CDS | 77278518 | 77278621 | 77278518 | ID=MsG0780040418.01.T01:cds;Parent=MsG0780040418.01.T01 |
| Chr7 | CDS | 77278765 | 77278842 | 77278765 | ID=MsG0780040418.01.T01:cds;Parent=MsG0780040418.01.T01 |
| Chr7 | CDS | 77279586 | 77279656 | 77279586 | ID=MsG0780040418.01.T01:cds;Parent=MsG0780040418.01.T01 |
| Chr7 | CDS | 77279763 | 77280123 | 77279763 | ID=MsG0780040418.01.T01:cds;Parent=MsG0780040418.01.T01 |
| Chr7 | three_prime_UTR | 77280124 | 77280331 | 77280124 | ID=MsG0780040418.01.T01:three_prime_utr;Parent=MsG0780040418.01.T01 |
| Gene Sequence |
| Protein sequence |
