Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001151.01.T01 | XP_004498262.1 | 82.937 | 252 | 42 | 1 | 7 | 257 | 86 | 337 | 4.28E-152 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001151.01.T01 | A0A1S2Y2A3 | 82.937 | 252 | 42 | 1 | 7 | 257 | 86 | 337 | 2.05e-152 | 437 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000157.01 | MsG0180001151.01 | 0.804867 | 1.757410e-49 | 9.163165e-47 |
| MsG0180000363.01 | MsG0180001151.01 | 0.802474 | 5.514211e-49 | 2.703606e-46 |
| MsG0180001151.01 | MsG0180001712.01 | 0.800011 | 1.760635e-48 | 8.109421e-46 |
| MsG0180001151.01 | MsG0180004599.01 | 0.806579 | 7.680718e-50 | 4.183861e-47 |
| MsG0180001151.01 | MsG0180005106.01 | 0.806944 | 6.431155e-50 | 3.536329e-47 |
| MsG0180001151.01 | MsG0180005268.01 | 0.807427 | 5.083037e-50 | 2.830354e-47 |
| MsG0180001151.01 | MsG0180006138.01 | 0.808763 | 2.639359e-50 | 1.521952e-47 |
| MsG0180001151.01 | MsG0280009350.01 | 0.801455 | 8.930221e-49 | 4.266582e-46 |
| MsG0180001151.01 | MsG0280009598.01 | 0.805227 | 1.477739e-49 | 7.775587e-47 |
| MsG0180001151.01 | MsG0380016117.01 | 0.811070 | 8.413297e-51 | 5.157631e-48 |
| MsG0180001151.01 | MsG0380017023.01 | 0.807134 | 5.863551e-50 | 3.240065e-47 |
| MsG0180001151.01 | MsG0380017279.01 | 0.801501 | 8.741197e-49 | 4.181171e-46 |
| MsG0180001151.01 | MsG0380017512.01 | 0.802953 | 4.392503e-49 | 2.180017e-46 |
| MsG0180001151.01 | MsG0480018473.01 | 0.806559 | 7.756981e-50 | 4.223383e-47 |
| MsG0180001151.01 | MsG0480021959.01 | 0.801239 | 9.890559e-49 | 4.699768e-46 |
| MsG0180001151.01 | MsG0480022493.01 | 0.802377 | 5.773838e-49 | 2.824092e-46 |
| MsG0180001151.01 | MsG0480022933.01 | 0.810741 | 9.911380e-51 | 6.023137e-48 |
| MsG0180001151.01 | MsG0480023079.01 | 0.810265 | 1.255910e-50 | 7.535946e-48 |
| MsG0180001151.01 | MsG0580027034.01 | 0.801827 | 7.492971e-49 | 3.613794e-46 |
| MsG0180001151.01 | MsG0680031538.01 | 0.810783 | 9.708309e-51 | 5.906288e-48 |
| MsG0180001151.01 | MsG0880042743.01 | 0.837772 | 4.267631e-57 | 5.601555e-54 |
| MsG0180001151.01 | MsG0880046244.01 | 0.809278 | 2.047863e-50 | 1.197255e-47 |
| MsG0180001151.01 | MsG0880046377.01 | 0.803694 | 3.084299e-49 | 1.560174e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001151.01.T01 | MTR_1g032200 | 84.861 | 251 | 37 | 1 | 7 | 257 | 97 | 346 | 4.17e-145 | 410 |
| MsG0180001151.01.T01 | MTR_1g032200 | 84.861 | 251 | 37 | 1 | 7 | 257 | 156 | 405 | 1.41e-143 | 408 |
| MsG0180001151.01.T01 | MTR_5g025880 | 86.192 | 239 | 32 | 1 | 11 | 249 | 161 | 398 | 8.26e-122 | 377 |
| MsG0180001151.01.T01 | MTR_1g090530 | 65.537 | 177 | 26 | 2 | 7 | 183 | 73 | 214 | 4.37e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001151.01.T01 | AT5G63830 | 51.779 | 253 | 109 | 4 | 8 | 257 | 164 | 406 | 1.60e-79 | 245 |
Find 83 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATCAGCCATGGAATTTC+AGG | 0.185152 | 1:+16615444 | MsG0180001151.01.T01:CDS |
| TCATTCTTCTTCAACTTTCT+TGG | 0.196072 | 1:-16615307 | None:intergenic |
| CAACTAGGTGAACAGTTAAA+AGG | 0.224295 | 1:-16614958 | None:intergenic |
| AAGAGGCAAATGTTTGATTA+AGG | 0.276897 | 1:+16615507 | MsG0180001151.01.T01:CDS |
| TGTTATCAGTCTACTTTCAT+TGG | 0.309270 | 1:+16615204 | MsG0180001151.01.T01:CDS |
| CAGGAACCGGTAGATGAAAT+TGG | 0.320976 | 1:+16614851 | MsG0180001151.01.T01:CDS |
| ATGACCAGCCAGAGGAAGTT+TGG | 0.352244 | 1:+16615389 | MsG0180001151.01.T01:CDS |
| AACTAGGTGAACAGTTAAAA+GGG | 0.384089 | 1:-16614957 | None:intergenic |
| GGAATTTCAGGGTAGCAATA+AGG | 0.390666 | 1:+16615456 | MsG0180001151.01.T01:CDS |
| AGAGGAGGTAGCGGAACTTC+AGG | 0.391556 | 1:-16614905 | None:intergenic |
| GATATATTTCATCATGTGTT+GGG | 0.412935 | 1:+16615363 | MsG0180001151.01.T01:CDS |
| ACCTCTTTCAAAGCAGGAAC+CGG | 0.420320 | 1:+16614838 | MsG0180001151.01.T01:CDS |
| TCTTTAGCAGCCATTGTAAC+GGG | 0.442868 | 1:+16615415 | MsG0180001151.01.T01:CDS |
| GAGGAGGTAGCGGAACTTCA+GGG | 0.451045 | 1:-16614904 | None:intergenic |
| CGTTACAATGGCTGCTAAAG+AGG | 0.452467 | 1:-16615413 | None:intergenic |
| GTTATCAGTCTACTTTCATT+GGG | 0.454234 | 1:+16615205 | MsG0180001151.01.T01:CDS |
| GTTGAGTGTGTCCTCAGTGT+TGG | 0.464931 | 1:+16615063 | MsG0180001151.01.T01:CDS |
| TAAAAGGGGTGATGGTTCCT+TGG | 0.470496 | 1:-16614942 | None:intergenic |
| AGGGCTTCCAGTACAGTCTC+TGG | 0.477548 | 1:-16615100 | None:intergenic |
| TTGAGTGTGTCCTCAGTGTT+GGG | 0.478818 | 1:+16615064 | MsG0180001151.01.T01:CDS |
| TGTTCAACCTCTTTCAAAGC+AGG | 0.484187 | 1:+16614832 | MsG0180001151.01.T01:CDS |
| TTACTTCCAATTTCATCTAC+CGG | 0.486431 | 1:-16614857 | None:intergenic |
| AGATATATTTCATCATGTGT+TGG | 0.495468 | 1:+16615362 | MsG0180001151.01.T01:CDS |
| ACCGGTTCCTGCTTTGAAAG+AGG | 0.496464 | 1:-16614839 | None:intergenic |
| TTCGCCTCTACAATGGTGAT+TGG | 0.497161 | 1:+16615008 | MsG0180001151.01.T01:CDS |
| AAAGAGGACCAAACTTCCTC+TGG | 0.497868 | 1:-16615397 | None:intergenic |
| CAACCGACGCAAGTCGCAAA+GGG | 0.505392 | 1:-16615248 | None:intergenic |
| TTCATTGGGAAGTCCTGCTA+TGG | 0.507704 | 1:+16615219 | MsG0180001151.01.T01:CDS |
| CTCTCCAGCTTACAAACACA+TGG | 0.512546 | 1:+16615147 | MsG0180001151.01.T01:CDS |
| CAAAGGGCACACACCATAGC+AGG | 0.519183 | 1:-16615232 | None:intergenic |
| CCTCACTCATTGCTTGGAGC+AGG | 0.521640 | 1:+16615120 | MsG0180001151.01.T01:CDS |
| GGAAGCCCTCACTCATTGCT+TGG | 0.522054 | 1:+16615114 | MsG0180001151.01.T01:CDS |
| CTCTTTAGCAGCCATTGTAA+CGG | 0.523197 | 1:+16615414 | MsG0180001151.01.T01:CDS |
| GCCTCTACAATGGTGATTGG+AGG | 0.527545 | 1:+16615011 | MsG0180001151.01.T01:CDS |
| CCTCAGTGTTGGGTCACGGT+GGG | 0.529875 | 1:+16615074 | MsG0180001151.01.T01:CDS |
| GATTAGAAGTAGTATTAAGC+AGG | 0.541049 | 1:+16615330 | MsG0180001151.01.T01:CDS |
| AGCTTACTCAGAGGAGGTAG+CGG | 0.543280 | 1:-16614914 | None:intergenic |
| TGATCACACCATGGGATCCA+TGG | 0.543972 | 1:+16614757 | None:intergenic |
| AGGACCAAACTTCCTCTGGC+TGG | 0.545689 | 1:-16615393 | None:intergenic |
| ACAACCATGGCTGACCCTAT+CGG | 0.555107 | 1:-16615040 | None:intergenic |
| ACATCAGCCATGGAATTTCA+GGG | 0.556707 | 1:+16615445 | MsG0180001151.01.T01:CDS |
| GGGCCGAGAGGAATTTCACT+TGG | 0.558432 | 1:-16614884 | None:intergenic |
| GTGTCCTCAGTGTTGGGTCA+CGG | 0.559629 | 1:+16615070 | MsG0180001151.01.T01:CDS |
| AAAATCCGTCTCAGTAAGGA+AGG | 0.559950 | 1:+16614800 | MsG0180001151.01.T01:CDS |
| GAGTTCCTTCCTTACTGAGA+CGG | 0.560318 | 1:-16614805 | None:intergenic |
| ATTGCTACCCTGAAATTCCA+TGG | 0.560925 | 1:-16615452 | None:intergenic |
| GTAGTATTAAGCAGGCAGAA+AGG | 0.563955 | 1:+16615338 | MsG0180001151.01.T01:CDS |
| TCAACCGACGCAAGTCGCAA+AGG | 0.565113 | 1:-16615249 | None:intergenic |
| TTGCGTCGGTTGATTCAAGA+AGG | 0.565624 | 1:+16615259 | MsG0180001151.01.T01:CDS |
| AACAATAAAGCAGAATCAAG+AGG | 0.565977 | 1:+16615490 | MsG0180001151.01.T01:CDS |
| TGGGCAGCCAGAGACTGTAC+TGG | 0.572805 | 1:+16615093 | MsG0180001151.01.T01:CDS |
| TCTGAGTAAGCTTAGTTCCA+AGG | 0.576318 | 1:+16614925 | MsG0180001151.01.T01:CDS |
| TGAACAGTTAAAAGGGGTGA+TGG | 0.577319 | 1:-16614950 | None:intergenic |
| TTCACTCTTCGCCTCTACAA+TGG | 0.580947 | 1:+16615001 | MsG0180001151.01.T01:CDS |
| GTGCCCTTTGCGACTTGCGT+CGG | 0.591448 | 1:+16615245 | MsG0180001151.01.T01:CDS |
| GCAGAATGCTTTGACCACCA+TGG | 0.595624 | 1:-16614774 | None:intergenic |
| ATTGGAGGTCAGATCCGATA+GGG | 0.609839 | 1:+16615026 | MsG0180001151.01.T01:CDS |
| GATTGGAGGTCAGATCCGAT+AGG | 0.613080 | 1:+16615025 | MsG0180001151.01.T01:CDS |
| TCCTCAGTGTTGGGTCACGG+TGG | 0.617160 | 1:+16615073 | MsG0180001151.01.T01:CDS |
| CTGCTCCAAGCAATGAGTGA+GGG | 0.618835 | 1:-16615119 | None:intergenic |
| ACCTCCAATCACCATTGTAG+AGG | 0.624097 | 1:-16615012 | None:intergenic |
| GAACCAAGTGAAATTCCTCT+CGG | 0.627401 | 1:+16614881 | MsG0180001151.01.T01:CDS |
| GAACTAAGCTTACTCAGAGG+AGG | 0.635073 | 1:-16614920 | None:intergenic |
| GAGGCGAAGAGTGAAGCAGT+AGG | 0.639548 | 1:-16614993 | None:intergenic |
| TCCAGCTTACAAACACATGG+GGG | 0.640813 | 1:+16615150 | MsG0180001151.01.T01:CDS |
| GGGACAAAAGACATCAGCCA+TGG | 0.643628 | 1:+16615435 | MsG0180001151.01.T01:CDS |
| TCTCCAGCTTACAAACACAT+GGG | 0.644640 | 1:+16615148 | MsG0180001151.01.T01:CDS |
| CTCCAGCTTACAAACACATG+GGG | 0.647609 | 1:+16615149 | MsG0180001151.01.T01:CDS |
| CCAGCTTACAAACACATGGG+GGG | 0.654030 | 1:+16615151 | MsG0180001151.01.T01:CDS |
| ACTAGGTGAACAGTTAAAAG+GGG | 0.655501 | 1:-16614956 | None:intergenic |
| TTTGACCACCATGGATCCCA+TGG | 0.656067 | 1:-16614765 | None:intergenic |
| CAGCTTACAAACACATGGGG+GGG | 0.657868 | 1:+16615152 | MsG0180001151.01.T01:CDS |
| AGGAGTATAATATATCAACT+AGG | 0.659318 | 1:-16614973 | None:intergenic |
| AGATCCGATAGGGTCAGCCA+TGG | 0.668328 | 1:+16615036 | MsG0180001151.01.T01:CDS |
| CCTGCTCCAAGCAATGAGTG+AGG | 0.668912 | 1:-16615120 | None:intergenic |
| GGACACACTCAACACAACCA+TGG | 0.681189 | 1:-16615053 | None:intergenic |
| AGCGGAACTTCAGGGCCGAG+AGG | 0.688421 | 1:-16614896 | None:intergenic |
| TTGGGTTCATGACCAGCCAG+AGG | 0.689050 | 1:+16615381 | MsG0180001151.01.T01:CDS |
| GTTGATTCAAGAAGGAGACA+AGG | 0.690629 | 1:+16615267 | MsG0180001151.01.T01:CDS |
| TTGGAACTAAGCTTACTCAG+AGG | 0.719107 | 1:-16614923 | None:intergenic |
| GATTCAAGAAGGAGACAAGG+AGG | 0.728271 | 1:+16615270 | MsG0180001151.01.T01:CDS |
| TCACACCATGGGATCCATGG+TGG | 0.731581 | 1:+16614760 | None:intergenic |
| CCCACCGTGACCCAACACTG+AGG | 0.760863 | 1:-16615074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGATATATTTCATCATGTGT+TGG | + | Chr1:16615362-16615381 | MsG0180001151.01.T01:CDS | 25.0% |
| ! | GATATATTTCATCATGTGTT+GGG | + | Chr1:16615363-16615382 | MsG0180001151.01.T01:CDS | 25.0% |
| !! | AGGAGTATAATATATCAACT+AGG | - | Chr1:16614976-16614995 | None:intergenic | 25.0% |
| AACAATAAAGCAGAATCAAG+AGG | + | Chr1:16615490-16615509 | MsG0180001151.01.T01:CDS | 30.0% | |
| AACTAGGTGAACAGTTAAAA+GGG | - | Chr1:16614960-16614979 | None:intergenic | 30.0% | |
| AAGAGGCAAATGTTTGATTA+AGG | + | Chr1:16615507-16615526 | MsG0180001151.01.T01:CDS | 30.0% | |
| GATTAGAAGTAGTATTAAGC+AGG | + | Chr1:16615330-16615349 | MsG0180001151.01.T01:CDS | 30.0% | |
| GTTATCAGTCTACTTTCATT+GGG | + | Chr1:16615205-16615224 | MsG0180001151.01.T01:CDS | 30.0% | |
| TCATTCTTCTTCAACTTTCT+TGG | - | Chr1:16615310-16615329 | None:intergenic | 30.0% | |
| TGTTATCAGTCTACTTTCAT+TGG | + | Chr1:16615204-16615223 | MsG0180001151.01.T01:CDS | 30.0% | |
| TTACTTCCAATTTCATCTAC+CGG | - | Chr1:16614860-16614879 | None:intergenic | 30.0% | |
| ACTAGGTGAACAGTTAAAAG+GGG | - | Chr1:16614959-16614978 | None:intergenic | 35.0% | |
| CAACTAGGTGAACAGTTAAA+AGG | - | Chr1:16614961-16614980 | None:intergenic | 35.0% | |
| !! | CTTTCTTGGCTTTTCTGATT+TGG | - | Chr1:16615296-16615315 | None:intergenic | 35.0% |
| AAAATCCGTCTCAGTAAGGA+AGG | + | Chr1:16614800-16614819 | MsG0180001151.01.T01:CDS | 40.0% | |
| ACATCAGCCATGGAATTTCA+GGG | + | Chr1:16615445-16615464 | MsG0180001151.01.T01:CDS | 40.0% | |
| ATTGCTACCCTGAAATTCCA+TGG | - | Chr1:16615455-16615474 | None:intergenic | 40.0% | |
| CCAAAAAATCCGTCTCAGTA+AGG | + | Chr1:16614796-16614815 | MsG0180001151.01.T01:CDS | 40.0% | |
| CTCTTTAGCAGCCATTGTAA+CGG | + | Chr1:16615414-16615433 | MsG0180001151.01.T01:CDS | 40.0% | |
| GAACCAAGTGAAATTCCTCT+CGG | + | Chr1:16614881-16614900 | MsG0180001151.01.T01:CDS | 40.0% | |
| GGAATTTCAGGGTAGCAATA+AGG | + | Chr1:16615456-16615475 | MsG0180001151.01.T01:CDS | 40.0% | |
| GTAGTATTAAGCAGGCAGAA+AGG | + | Chr1:16615338-16615357 | MsG0180001151.01.T01:CDS | 40.0% | |
| TCTCCAGCTTACAAACACAT+GGG | + | Chr1:16615148-16615167 | MsG0180001151.01.T01:CDS | 40.0% | |
| TCTGAGTAAGCTTAGTTCCA+AGG | + | Chr1:16614925-16614944 | MsG0180001151.01.T01:CDS | 40.0% | |
| TCTTTAGCAGCCATTGTAAC+GGG | + | Chr1:16615415-16615434 | MsG0180001151.01.T01:CDS | 40.0% | |
| TGAACAGTTAAAAGGGGTGA+TGG | - | Chr1:16614953-16614972 | None:intergenic | 40.0% | |
| TGTTCAACCTCTTTCAAAGC+AGG | + | Chr1:16614832-16614851 | MsG0180001151.01.T01:CDS | 40.0% | |
| TTGGAACTAAGCTTACTCAG+AGG | - | Chr1:16614926-16614945 | None:intergenic | 40.0% | |
| ! | GTTGATTCAAGAAGGAGACA+AGG | + | Chr1:16615267-16615286 | MsG0180001151.01.T01:CDS | 40.0% |
| ! | TGTCTTTTGTCCCGTTACAA+TGG | - | Chr1:16615428-16615447 | None:intergenic | 40.0% |
| !!! | CCTTACTGAGACGGATTTTT+TGG | - | Chr1:16614799-16614818 | None:intergenic | 40.0% |
| AAAGAGGACCAAACTTCCTC+TGG | - | Chr1:16615400-16615419 | None:intergenic | 45.0% | |
| ACCTCCAATCACCATTGTAG+AGG | - | Chr1:16615015-16615034 | None:intergenic | 45.0% | |
| ACCTCTTTCAAAGCAGGAAC+CGG | + | Chr1:16614838-16614857 | MsG0180001151.01.T01:CDS | 45.0% | |
| ATTGGAGGTCAGATCCGATA+GGG | + | Chr1:16615026-16615045 | MsG0180001151.01.T01:CDS | 45.0% | |
| CAGGAACCGGTAGATGAAAT+TGG | + | Chr1:16614851-16614870 | MsG0180001151.01.T01:CDS | 45.0% | |
| CGTTACAATGGCTGCTAAAG+AGG | - | Chr1:16615416-16615435 | None:intergenic | 45.0% | |
| CTCCAGCTTACAAACACATG+GGG | + | Chr1:16615149-16615168 | MsG0180001151.01.T01:CDS | 45.0% | |
| CTCTCCAGCTTACAAACACA+TGG | + | Chr1:16615147-16615166 | MsG0180001151.01.T01:CDS | 45.0% | |
| GAACTAAGCTTACTCAGAGG+AGG | - | Chr1:16614923-16614942 | None:intergenic | 45.0% | |
| GACATCAGCCATGGAATTTC+AGG | + | Chr1:16615444-16615463 | MsG0180001151.01.T01:CDS | 45.0% | |
| GAGTTCCTTCCTTACTGAGA+CGG | - | Chr1:16614808-16614827 | None:intergenic | 45.0% | |
| GATTCAAGAAGGAGACAAGG+AGG | + | Chr1:16615270-16615289 | MsG0180001151.01.T01:CDS | 45.0% | |
| TCCAGCTTACAAACACATGG+GGG | + | Chr1:16615150-16615169 | MsG0180001151.01.T01:CDS | 45.0% | |
| TTCACTCTTCGCCTCTACAA+TGG | + | Chr1:16615001-16615020 | MsG0180001151.01.T01:CDS | 45.0% | |
| TTCATTGGGAAGTCCTGCTA+TGG | + | Chr1:16615219-16615238 | MsG0180001151.01.T01:CDS | 45.0% | |
| TTCGCCTCTACAATGGTGAT+TGG | + | Chr1:16615008-16615027 | MsG0180001151.01.T01:CDS | 45.0% | |
| TTGAGTGTGTCCTCAGTGTT+GGG | + | Chr1:16615064-16615083 | MsG0180001151.01.T01:CDS | 45.0% | |
| ! | TAAAAGGGGTGATGGTTCCT+TGG | - | Chr1:16614945-16614964 | None:intergenic | 45.0% |
| !! | TTGCGTCGGTTGATTCAAGA+AGG | + | Chr1:16615259-16615278 | MsG0180001151.01.T01:CDS | 45.0% |
| ACAACCATGGCTGACCCTAT+CGG | - | Chr1:16615043-16615062 | None:intergenic | 50.0% | |
| AGCTTACTCAGAGGAGGTAG+CGG | - | Chr1:16614917-16614936 | None:intergenic | 50.0% | |
| ATGACCAGCCAGAGGAAGTT+TGG | + | Chr1:16615389-16615408 | MsG0180001151.01.T01:CDS | 50.0% | |
| CAGCTTACAAACACATGGGG+GGG | + | Chr1:16615152-16615171 | MsG0180001151.01.T01:CDS | 50.0% | |
| CCAGCTTACAAACACATGGG+GGG | + | Chr1:16615151-16615170 | MsG0180001151.01.T01:CDS | 50.0% | |
| CTGCTCCAAGCAATGAGTGA+GGG | - | Chr1:16615122-16615141 | None:intergenic | 50.0% | |
| GATTGGAGGTCAGATCCGAT+AGG | + | Chr1:16615025-16615044 | MsG0180001151.01.T01:CDS | 50.0% | |
| GCAGAATGCTTTGACCACCA+TGG | - | Chr1:16614777-16614796 | None:intergenic | 50.0% | |
| GCCTCTACAATGGTGATTGG+AGG | + | Chr1:16615011-16615030 | MsG0180001151.01.T01:CDS | 50.0% | |
| GGACACACTCAACACAACCA+TGG | - | Chr1:16615056-16615075 | None:intergenic | 50.0% | |
| GGGACAAAAGACATCAGCCA+TGG | + | Chr1:16615435-16615454 | MsG0180001151.01.T01:CDS | 50.0% | |
| GTTGAGTGTGTCCTCAGTGT+TGG | + | Chr1:16615063-16615082 | MsG0180001151.01.T01:CDS | 50.0% | |
| !! | ACCGGTTCCTGCTTTGAAAG+AGG | - | Chr1:16614842-16614861 | None:intergenic | 50.0% |
| AGATCCGATAGGGTCAGCCA+TGG | + | Chr1:16615036-16615055 | MsG0180001151.01.T01:CDS | 55.0% | |
| AGGACCAAACTTCCTCTGGC+TGG | - | Chr1:16615396-16615415 | None:intergenic | 55.0% | |
| AGGGCTTCCAGTACAGTCTC+TGG | - | Chr1:16615103-16615122 | None:intergenic | 55.0% | |
| CAACCGACGCAAGTCGCAAA+GGG | - | Chr1:16615251-16615270 | None:intergenic | 55.0% | |
| CCCCCCATGTGTTTGTAAGC+TGG | - | Chr1:16615154-16615173 | None:intergenic | 55.0% | |
| CCTCACTCATTGCTTGGAGC+AGG | + | Chr1:16615120-16615139 | MsG0180001151.01.T01:CDS | 55.0% | |
| CCTGCTCCAAGCAATGAGTG+AGG | - | Chr1:16615123-16615142 | None:intergenic | 55.0% | |
| GAGGCGAAGAGTGAAGCAGT+AGG | - | Chr1:16614996-16615015 | None:intergenic | 55.0% | |
| GGAAGCCCTCACTCATTGCT+TGG | + | Chr1:16615114-16615133 | MsG0180001151.01.T01:CDS | 55.0% | |
| GGGCCGAGAGGAATTTCACT+TGG | - | Chr1:16614887-16614906 | None:intergenic | 55.0% | |
| TCAACCGACGCAAGTCGCAA+AGG | - | Chr1:16615252-16615271 | None:intergenic | 55.0% | |
| TTGGGTTCATGACCAGCCAG+AGG | + | Chr1:16615381-16615400 | MsG0180001151.01.T01:CDS | 55.0% | |
| ! | CAAAGGGCACACACCATAGC+AGG | - | Chr1:16615235-16615254 | None:intergenic | 55.0% |
| ! | GTGTCCTCAGTGTTGGGTCA+CGG | + | Chr1:16615070-16615089 | MsG0180001151.01.T01:CDS | 55.0% |
| !! | AGAGGAGGTAGCGGAACTTC+AGG | - | Chr1:16614908-16614927 | None:intergenic | 55.0% |
| !! | GAGGAGGTAGCGGAACTTCA+GGG | - | Chr1:16614907-16614926 | None:intergenic | 55.0% |
| GTGCCCTTTGCGACTTGCGT+CGG | + | Chr1:16615245-16615264 | MsG0180001151.01.T01:CDS | 60.0% | |
| TGGGCAGCCAGAGACTGTAC+TGG | + | Chr1:16615093-16615112 | MsG0180001151.01.T01:CDS | 60.0% | |
| ! | CCTCAGTGTTGGGTCACGGT+GGG | + | Chr1:16615074-16615093 | MsG0180001151.01.T01:CDS | 60.0% |
| ! | TCCTCAGTGTTGGGTCACGG+TGG | + | Chr1:16615073-16615092 | MsG0180001151.01.T01:CDS | 60.0% |
| AGCGGAACTTCAGGGCCGAG+AGG | - | Chr1:16614899-16614918 | None:intergenic | 65.0% | |
| CACATGGGGGGGCTGCAGTT+CGG | + | Chr1:16615163-16615182 | MsG0180001151.01.T01:CDS | 65.0% | |
| CCCACCGTGACCCAACACTG+AGG | - | Chr1:16615077-16615096 | None:intergenic | 65.0% | |
| GGGGGGCTGCAGTTCGGTTT+AGG | + | Chr1:16615169-16615188 | MsG0180001151.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 16614767 | 16615540 | 16614767 | ID=MsG0180001151.01;Name=MsG0180001151.01 |
| Chr1 | mRNA | 16614767 | 16615540 | 16614767 | ID=MsG0180001151.01.T01;Parent=MsG0180001151.01;Name=MsG0180001151.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|257 |
| Chr1 | exon | 16614767 | 16615540 | 16614767 | ID=MsG0180001151.01.T01:exon:31433;Parent=MsG0180001151.01.T01 |
| Chr1 | CDS | 16614767 | 16615540 | 16614767 | ID=MsG0180001151.01.T01:cds;Parent=MsG0180001151.01.T01 |
| Gene Sequence |
| Protein sequence |
