Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001712.01.T01 | XP_013467041.1 | 96.715 | 274 | 9 | 0 | 1 | 274 | 1 | 274 | 0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001712.01.T01 | Q9LW60 | 43.885 | 278 | 132 | 6 | 1 | 273 | 1 | 259 | 4.39E-70 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001712.01.T01 | A0A072VHH4 | 96.715 | 274 | 9 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047825.01 | MsG0180001712.01 | 0.805835 | 1.101856e-49 | 5.889311e-47 |
| MsG0080047912.01 | MsG0180001712.01 | 0.821267 | 4.421860e-53 | 3.580120e-50 |
| MsG0080048764.01 | MsG0180001712.01 | 0.805260 | 1.454692e-49 | 7.660545e-47 |
| MsG0080048982.01 | MsG0180001712.01 | 0.823966 | 1.041646e-53 | 9.104124e-51 |
| MsG0180000157.01 | MsG0180001712.01 | 0.860080 | 2.650838e-63 | 7.158286e-60 |
| MsG0180000271.01 | MsG0180001712.01 | 0.866426 | 2.875564e-65 | 9.687396e-62 |
| MsG0180000526.01 | MsG0180001712.01 | 0.803989 | 2.678421e-49 | 1.365256e-46 |
| MsG0180000546.01 | MsG0180001712.01 | 0.830344 | 3.096907e-55 | 3.254038e-52 |
| MsG0180000550.01 | MsG0180001712.01 | 0.840512 | 8.316527e-58 | 1.187392e-54 |
| MsG0180000669.01 | MsG0180001712.01 | 0.847050 | 1.477133e-59 | 2.593139e-56 |
| MsG0180000673.01 | MsG0180001712.01 | 0.837925 | 3.898339e-57 | 5.140316e-54 |
| MsG0180000680.01 | MsG0180001712.01 | 0.804695 | 1.909737e-49 | 9.912185e-47 |
| MsG0180000855.01 | MsG0180001712.01 | 0.805600 | 1.234610e-49 | 6.558781e-47 |
| MsG0180001043.01 | MsG0180001712.01 | 0.839525 | 1.503856e-57 | 2.082255e-54 |
| MsG0180001151.01 | MsG0180001712.01 | 0.800011 | 1.760635e-48 | 8.109421e-46 |
| MsG0180001355.01 | MsG0180001712.01 | 0.832192 | 1.087347e-55 | 1.206477e-52 |
| MsG0180001663.01 | MsG0180001712.01 | 0.859086 | 5.273175e-63 | 1.375799e-59 |
| MsG0180001712.01 | MsG0180001842.01 | 0.812511 | 4.086794e-51 | 2.603520e-48 |
| MsG0180001712.01 | MsG0180001921.01 | 0.814409 | 1.563322e-51 | 1.048227e-48 |
| MsG0180001712.01 | MsG0180001922.01 | 0.806650 | 7.421079e-50 | 4.049520e-47 |
| MsG0180001712.01 | MsG0180002140.01 | 0.840688 | 7.477289e-58 | 1.073397e-54 |
| MsG0180001712.01 | MsG0180002750.01 | -0.819102 | 1.385477e-52 | 1.056270e-49 |
| MsG0180001712.01 | MsG0180002894.01 | 0.801718 | 7.887646e-49 | 3.793511e-46 |
| MsG0180001712.01 | MsG0180003088.01 | 0.837206 | 5.958313e-57 | 7.684300e-54 |
| MsG0180001712.01 | MsG0180003252.01 | 0.839499 | 1.527684e-57 | 2.113690e-54 |
| MsG0180001712.01 | MsG0180003952.01 | 0.813796 | 2.134688e-51 | 1.407638e-48 |
| MsG0180001712.01 | MsG0180004388.01 | 0.804851 | 1.771244e-49 | 9.231104e-47 |
| MsG0180001712.01 | MsG0180004599.01 | 0.823937 | 1.058436e-53 | 9.243299e-51 |
| MsG0180001712.01 | MsG0180004600.01 | 0.814136 | 1.796910e-51 | 1.195876e-48 |
| MsG0180001712.01 | MsG0180004602.01 | 0.830513 | 2.815471e-55 | 2.972635e-52 |
| MsG0180001712.01 | MsG0180004603.01 | 0.821119 | 4.783591e-53 | 3.857387e-50 |
| MsG0180001712.01 | MsG0180004824.01 | 0.854995 | 8.488969e-62 | 1.931119e-58 |
| MsG0180001712.01 | MsG0180004886.01 | -0.845543 | 3.802565e-59 | 6.358411e-56 |
| MsG0180001712.01 | MsG0180004926.01 | 0.802549 | 5.321222e-49 | 2.613967e-46 |
| MsG0180001712.01 | MsG0180005106.01 | 0.825345 | 4.930003e-54 | 4.481750e-51 |
| MsG0180001712.01 | MsG0180005160.01 | 0.828471 | 8.825279e-55 | 8.780519e-52 |
| MsG0180001712.01 | MsG0180005268.01 | 0.831621 | 1.504449e-55 | 1.641531e-52 |
| MsG0180001712.01 | MsG0180005303.01 | -0.824937 | 6.157072e-54 | 5.532808e-51 |
| MsG0180001712.01 | MsG0180005446.01 | 0.803500 | 3.383632e-49 | 1.703134e-46 |
| MsG0180001712.01 | MsG0180005505.01 | 0.830702 | 2.531265e-55 | 2.687703e-52 |
| MsG0180001712.01 | MsG0180005676.01 | -0.800146 | 1.652598e-48 | 7.638039e-46 |
| MsG0180001712.01 | MsG0180005960.01 | 0.813943 | 1.981202e-51 | 1.311595e-48 |
| MsG0180001712.01 | MsG0180005999.01 | 0.820290 | 7.416283e-53 | 5.844006e-50 |
| MsG0180001712.01 | MsG0180006016.01 | 0.821123 | 4.772779e-53 | 3.849166e-50 |
| MsG0180001712.01 | MsG0180006046.01 | 0.808975 | 2.378479e-50 | 1.379259e-47 |
| MsG0180001712.01 | MsG0180006064.01 | -0.804297 | 2.311853e-49 | 1.187675e-46 |
| MsG0180001712.01 | MsG0180006138.01 | 0.818051 | 2.398428e-52 | 1.776174e-49 |
| MsG0180001712.01 | MsG0180006144.01 | 0.817947 | 2.530887e-52 | 1.868975e-49 |
| MsG0180001712.01 | MsG0180006220.01 | 0.821533 | 3.839163e-53 | 3.131577e-50 |
| MsG0180001712.01 | MsG0280006302.01 | -0.830182 | 3.391225e-55 | 3.546751e-52 |
| MsG0180001712.01 | MsG0280006406.01 | 0.801614 | 8.284559e-49 | 3.973935e-46 |
| MsG0180001712.01 | MsG0280006411.01 | 0.841490 | 4.603508e-58 | 6.775474e-55 |
| MsG0180001712.01 | MsG0280006595.01 | 0.819155 | 1.347574e-52 | 1.028811e-49 |
| MsG0180001712.01 | MsG0280006682.01 | 0.804065 | 2.583729e-49 | 1.319523e-46 |
| MsG0180001712.01 | MsG0280006708.01 | 0.836412 | 9.501623e-57 | 1.196483e-53 |
| MsG0180001712.01 | MsG0280007547.01 | 0.866052 | 3.778593e-65 | 1.256299e-61 |
| MsG0180001712.01 | MsG0280007691.01 | 0.810468 | 1.135316e-50 | 6.849146e-48 |
| MsG0180001712.01 | MsG0280007714.01 | 0.855568 | 5.782807e-62 | 1.340784e-58 |
| MsG0180001712.01 | MsG0280008104.01 | 0.811090 | 8.330504e-51 | 5.109594e-48 |
| MsG0180001712.01 | MsG0280008613.01 | 0.818912 | 1.530363e-52 | 1.160731e-49 |
| MsG0180001712.01 | MsG0280009235.01 | 0.830946 | 2.204862e-55 | 2.358025e-52 |
| MsG0180001712.01 | MsG0280009598.01 | 0.815588 | 8.560664e-52 | 5.926560e-49 |
| MsG0180001712.01 | MsG0280010204.01 | 0.842519 | 2.461704e-58 | 3.742016e-55 |
| MsG0180001712.01 | MsG0280010205.01 | 0.813499 | 2.481932e-51 | 1.623558e-48 |
| MsG0180001712.01 | MsG0280010378.01 | 0.805460 | 1.321001e-49 | 6.992841e-47 |
| MsG0180001712.01 | MsG0280010416.01 | 0.800650 | 1.304405e-48 | 6.106583e-46 |
| MsG0180001712.01 | MsG0280010423.01 | -0.829503 | 4.964970e-55 | 5.090900e-52 |
| MsG0180001712.01 | MsG0280010784.01 | 0.811881 | 5.608739e-51 | 3.512647e-48 |
| MsG0180001712.01 | MsG0280011141.01 | 0.808274 | 3.356923e-50 | 1.911268e-47 |
| MsG0180001712.01 | MsG0280011163.01 | 0.807145 | 5.830945e-50 | 3.223038e-47 |
| MsG0180001712.01 | MsG0280011235.01 | 0.817898 | 2.596239e-52 | 1.914701e-49 |
| MsG0180001712.01 | MsG0280011376.01 | 0.862555 | 4.664483e-64 | 1.371517e-60 |
| MsG0180001712.01 | MsG0380011704.01 | 0.804246 | 2.368267e-49 | 1.215014e-46 |
| MsG0180001712.01 | MsG0380011754.01 | 0.812670 | 3.771738e-51 | 2.412857e-48 |
| MsG0180001712.01 | MsG0380011870.01 | 0.807524 | 4.847074e-50 | 2.705809e-47 |
| MsG0180001712.01 | MsG0380011895.01 | 0.831596 | 1.526364e-55 | 1.664271e-52 |
| MsG0180001712.01 | MsG0380012050.01 | 0.837320 | 5.573034e-57 | 7.212632e-54 |
| MsG0180001712.01 | MsG0380012186.01 | 0.803689 | 3.091609e-49 | 1.563670e-46 |
| MsG0180001712.01 | MsG0380012187.01 | 0.812486 | 4.138008e-51 | 2.634480e-48 |
| MsG0180001712.01 | MsG0380013436.01 | 0.819678 | 1.023556e-52 | 7.929420e-50 |
| MsG0180001712.01 | MsG0380013853.01 | 0.836622 | 8.400125e-57 | 1.064371e-53 |
| MsG0180001712.01 | MsG0380014551.01 | -0.802135 | 6.477674e-49 | 3.148649e-46 |
| MsG0180001712.01 | MsG0380014770.01 | 0.833905 | 4.075808e-56 | 4.760725e-53 |
| MsG0180001712.01 | MsG0380015149.01 | 0.819435 | 1.163436e-52 | 8.952210e-50 |
| MsG0180001712.01 | MsG0380015166.01 | 0.820151 | 7.981684e-53 | 6.265827e-50 |
| MsG0180001712.01 | MsG0380015779.01 | 0.804245 | 2.369798e-49 | 1.215753e-46 |
| MsG0180001712.01 | MsG0380015934.01 | 0.839370 | 1.650084e-57 | 2.274099e-54 |
| MsG0180001712.01 | MsG0380016118.01 | -0.812730 | 3.659182e-51 | 2.344606e-48 |
| MsG0180001712.01 | MsG0380016182.01 | 0.808444 | 3.087311e-50 | 1.765632e-47 |
| MsG0180001712.01 | MsG0380016223.01 | 0.816413 | 5.601089e-52 | 3.966085e-49 |
| MsG0180001712.01 | MsG0380016740.01 | 0.805475 | 1.311338e-49 | 6.944196e-47 |
| MsG0180001712.01 | MsG0380016828.01 | -0.816555 | 5.205012e-52 | 3.699977e-49 |
| MsG0180001712.01 | MsG0380016859.01 | 0.813457 | 2.534978e-51 | 1.656419e-48 |
| MsG0180001712.01 | MsG0380017023.01 | 0.800878 | 1.172184e-48 | 5.519543e-46 |
| MsG0180001712.01 | MsG0380017126.01 | 0.835311 | 1.806536e-56 | 2.201015e-53 |
| MsG0180001712.01 | MsG0380017178.01 | -0.805497 | 1.297343e-49 | 6.873915e-47 |
| MsG0180001712.01 | MsG0380017226.01 | 0.833741 | 4.480743e-56 | 5.207055e-53 |
| MsG0180001712.01 | MsG0380017286.01 | 0.866844 | 2.118343e-65 | 7.243677e-62 |
| MsG0180001712.01 | MsG0380017512.01 | 0.811981 | 5.332638e-51 | 3.348872e-48 |
| MsG0180001712.01 | MsG0380017551.01 | -0.808665 | 2.769505e-50 | 1.592910e-47 |
| MsG0180001712.01 | MsG0380017680.01 | 0.822195 | 2.696738e-53 | 2.241492e-50 |
| MsG0180001712.01 | MsG0380017888.01 | 0.845705 | 3.437961e-59 | 5.779662e-56 |
| MsG0180001712.01 | MsG0380017941.01 | 0.855222 | 7.293636e-62 | 1.671582e-58 |
| MsG0180001712.01 | MsG0480018213.01 | 0.823049 | 1.707358e-53 | 1.454125e-50 |
| MsG0180001712.01 | MsG0480018321.01 | 0.814952 | 1.185550e-51 | 8.065608e-49 |
| MsG0180001712.01 | MsG0480018519.01 | 0.813235 | 2.836615e-51 | 1.842071e-48 |
| MsG0180001712.01 | MsG0480018603.01 | 0.801959 | 7.037945e-49 | 3.405648e-46 |
| MsG0180001712.01 | MsG0480018606.01 | 0.815199 | 1.044912e-51 | 7.156697e-49 |
| MsG0180001712.01 | MsG0480018635.01 | 0.828271 | 9.864724e-55 | 9.757330e-52 |
| MsG0180001712.01 | MsG0480018906.01 | 0.821553 | 3.797899e-53 | 3.099830e-50 |
| MsG0180001712.01 | MsG0480018970.01 | 0.811488 | 6.827175e-51 | 4.231798e-48 |
| MsG0180001712.01 | MsG0480020327.01 | -0.838031 | 3.660618e-57 | 4.842998e-54 |
| MsG0180001712.01 | MsG0480020445.01 | 0.806571 | 7.711665e-50 | 4.199891e-47 |
| MsG0180001712.01 | MsG0480020487.01 | 0.834386 | 3.088771e-56 | 3.659837e-53 |
| MsG0180001712.01 | MsG0480020720.01 | 0.808511 | 2.988672e-50 | 1.712077e-47 |
| MsG0180001712.01 | MsG0480020843.01 | 0.834942 | 2.238654e-56 | 2.697207e-53 |
| MsG0180001712.01 | MsG0480021041.01 | 0.817382 | 3.394423e-52 | 2.468340e-49 |
| MsG0180001712.01 | MsG0480021061.01 | 0.826062 | 3.332883e-54 | 3.092336e-51 |
| MsG0180001712.01 | MsG0480021164.01 | 0.804134 | 2.498617e-49 | 1.278289e-46 |
| MsG0180001712.01 | MsG0480021190.01 | 0.807670 | 4.512633e-50 | 2.528615e-47 |
| MsG0180001712.01 | MsG0480022035.01 | 0.802199 | 6.284096e-49 | 3.059405e-46 |
| MsG0180001712.01 | MsG0480022246.01 | 0.810655 | 1.034938e-50 | 6.274713e-48 |
| MsG0180001712.01 | MsG0480022343.01 | 0.825068 | 5.734728e-54 | 5.172416e-51 |
| MsG0180001712.01 | MsG0480022451.01 | 0.809381 | 1.946335e-50 | 1.141054e-47 |
| MsG0180001712.01 | MsG0480022493.01 | 0.809335 | 1.991331e-50 | 1.165967e-47 |
| MsG0180001712.01 | MsG0480022575.01 | 0.811641 | 6.323977e-51 | 3.935362e-48 |
| MsG0180001712.01 | MsG0480022933.01 | 0.804369 | 2.232795e-49 | 1.149219e-46 |
| MsG0180001712.01 | MsG0480023099.01 | 0.820719 | 5.911759e-53 | 4.714121e-50 |
| MsG0180001712.01 | MsG0480023270.01 | 0.805614 | 1.225839e-49 | 6.514771e-47 |
| MsG0180001712.01 | MsG0480023517.01 | 0.814680 | 1.361745e-51 | 9.197072e-49 |
| MsG0180001712.01 | MsG0480023554.01 | 0.805174 | 1.516000e-49 | 7.966396e-47 |
| MsG0180001712.01 | MsG0480023638.01 | 0.804444 | 2.153705e-49 | 1.110613e-46 |
| MsG0180001712.01 | MsG0480023776.01 | 0.851796 | 7.025418e-61 | 1.438342e-57 |
| MsG0180001712.01 | MsG0580024073.01 | 0.828069 | 1.103234e-54 | 1.084889e-51 |
| MsG0180001712.01 | MsG0580024114.01 | 0.821293 | 4.361136e-53 | 3.533675e-50 |
| MsG0180001712.01 | MsG0580024130.01 | 0.804473 | 2.124169e-49 | 1.096180e-46 |
| MsG0180001712.01 | MsG0580024363.01 | -0.801384 | 9.237296e-49 | 4.405370e-46 |
| MsG0180001712.01 | MsG0580024472.01 | 0.809950 | 1.468437e-50 | 8.739297e-48 |
| MsG0180001712.01 | MsG0580024495.01 | 0.811622 | 6.385260e-51 | 3.971618e-48 |
| MsG0180001712.01 | MsG0580024581.01 | 0.822219 | 2.662516e-53 | 2.214610e-50 |
| MsG0180001712.01 | MsG0580024632.01 | 0.800408 | 1.461804e-48 | 6.801443e-46 |
| MsG0180001712.01 | MsG0580025026.01 | 0.801928 | 7.142875e-49 | 3.453759e-46 |
| MsG0180001712.01 | MsG0580025278.01 | 0.826520 | 2.593403e-54 | 2.437733e-51 |
| MsG0180001712.01 | MsG0580025328.01 | 0.829191 | 5.910263e-55 | 6.005792e-52 |
| MsG0180001712.01 | MsG0580025400.01 | 0.805413 | 1.351001e-49 | 7.142988e-47 |
| MsG0180001712.01 | MsG0580025448.01 | 0.802812 | 4.696352e-49 | 2.322710e-46 |
| MsG0180001712.01 | MsG0580025453.01 | 0.813260 | 2.801417e-51 | 1.820480e-48 |
| MsG0180001712.01 | MsG0580027034.01 | 0.875787 | 2.339626e-68 | 1.106857e-64 |
| MsG0180001712.01 | MsG0580027401.01 | 0.838111 | 3.492129e-57 | 4.630684e-54 |
| MsG0180001712.01 | MsG0580028988.01 | 0.824785 | 6.687986e-54 | 5.983895e-51 |
| MsG0180001712.01 | MsG0580029432.01 | 0.856906 | 2.344031e-62 | 5.682202e-59 |
| MsG0180001712.01 | MsG0580029758.01 | 0.839572 | 1.462053e-57 | 2.027302e-54 |
| MsG0180001712.01 | MsG0580029794.01 | 0.803318 | 3.692139e-49 | 1.849593e-46 |
| MsG0180001712.01 | MsG0580029999.01 | -0.829244 | 5.735955e-55 | 5.837882e-52 |
| MsG0180001712.01 | MsG0580030204.01 | 0.815920 | 7.218384e-52 | 5.042662e-49 |
| MsG0180001712.01 | MsG0680030303.01 | 0.844161 | 8.973596e-59 | 1.436178e-55 |
| MsG0180001712.01 | MsG0680030415.01 | 0.804740 | 1.868784e-49 | 9.711569e-47 |
| MsG0180001712.01 | MsG0680030629.01 | 0.806938 | 6.450536e-50 | 3.546447e-47 |
| MsG0180001712.01 | MsG0680030636.01 | 0.848018 | 8.007850e-60 | 1.449650e-56 |
| MsG0180001712.01 | MsG0680031020.01 | 0.823041 | 1.714760e-53 | 1.460124e-50 |
| MsG0180001712.01 | MsG0680031355.01 | 0.806816 | 6.843780e-50 | 3.750927e-47 |
| MsG0180001712.01 | MsG0680031446.01 | -0.835640 | 1.491876e-56 | 1.835308e-53 |
| MsG0180001712.01 | MsG0680031459.01 | 0.851784 | 7.082194e-61 | 1.449390e-57 |
| MsG0180001712.01 | MsG0680031536.01 | 0.814918 | 1.205912e-51 | 8.196694e-49 |
| MsG0180001712.01 | MsG0680031538.01 | 0.832551 | 8.864435e-56 | 9.941529e-53 |
| MsG0180001712.01 | MsG0680031694.01 | 0.826104 | 3.258497e-54 | 3.026884e-51 |
| MsG0180001712.01 | MsG0680031712.01 | 0.826819 | 2.201070e-54 | 2.086788e-51 |
| MsG0180001712.01 | MsG0680032641.01 | 0.839177 | 1.852219e-57 | 2.537292e-54 |
| MsG0180001712.01 | MsG0680032996.01 | 0.803496 | 3.390696e-49 | 1.706487e-46 |
| MsG0180001712.01 | MsG0680033391.01 | 0.819623 | 1.053739e-52 | 8.150513e-50 |
| MsG0180001712.01 | MsG0680033926.01 | 0.808071 | 3.708146e-50 | 2.099801e-47 |
| MsG0180001712.01 | MsG0680034036.01 | 0.801659 | 8.111428e-49 | 3.895332e-46 |
| MsG0180001712.01 | MsG0680034219.01 | 0.803242 | 3.828022e-49 | 1.913966e-46 |
| MsG0180001712.01 | MsG0680034655.01 | 0.859707 | 3.432198e-63 | 9.148126e-60 |
| MsG0180001712.01 | MsG0680035278.01 | 0.827324 | 1.665749e-54 | 1.602932e-51 |
| MsG0180001712.01 | MsG0680035582.01 | 0.875573 | 2.771195e-68 | 1.300469e-64 |
| MsG0180001712.01 | MsG0680035601.01 | 0.811452 | 6.951919e-51 | 4.304932e-48 |
| MsG0180001712.01 | MsG0680035844.01 | 0.811991 | 5.308214e-51 | 3.334374e-48 |
| MsG0180001712.01 | MsG0680035854.01 | 0.828107 | 1.080211e-54 | 1.063463e-51 |
| MsG0180001712.01 | MsG0780037082.01 | 0.852185 | 5.448762e-61 | 1.129466e-57 |
| MsG0180001712.01 | MsG0780037512.01 | 0.804491 | 2.106264e-49 | 1.087426e-46 |
| MsG0180001712.01 | MsG0780038092.01 | 0.806602 | 7.595187e-50 | 4.139735e-47 |
| MsG0180001712.01 | MsG0780038495.01 | 0.806587 | 7.650875e-50 | 4.168430e-47 |
| MsG0180001712.01 | MsG0780038644.01 | 0.808181 | 3.513315e-50 | 1.995394e-47 |
| MsG0180001712.01 | MsG0780038833.01 | 0.838591 | 2.625367e-57 | 3.533097e-54 |
| MsG0180001712.01 | MsG0780038911.01 | 0.800157 | 1.644022e-48 | 7.600341e-46 |
| MsG0180001712.01 | MsG0780039143.01 | 0.813623 | 2.330706e-51 | 1.529727e-48 |
| MsG0180001712.01 | MsG0780039405.01 | 0.807101 | 5.959313e-50 | 3.290095e-47 |
| MsG0180001712.01 | MsG0780039515.01 | -0.806522 | 7.897722e-50 | 4.295810e-47 |
| MsG0180001712.01 | MsG0780039828.01 | 0.800213 | 1.601798e-48 | 7.415864e-46 |
| MsG0180001712.01 | MsG0780039875.01 | 0.806623 | 7.518375e-50 | 4.099867e-47 |
| MsG0180001712.01 | MsG0780039943.01 | 0.801445 | 8.976241e-49 | 4.287459e-46 |
| MsG0180001712.01 | MsG0780040375.01 | -0.807062 | 6.072655e-50 | 3.349423e-47 |
| MsG0180001712.01 | MsG0780040596.01 | 0.824913 | 6.239530e-54 | 5.603122e-51 |
| MsG0180001712.01 | MsG0780040726.01 | 0.813063 | 3.094007e-51 | 1.999938e-48 |
| MsG0180001712.01 | MsG0780040758.01 | 0.821214 | 4.546572e-53 | 3.676206e-50 |
| MsG0180001712.01 | MsG0780041101.01 | 0.818272 | 2.137379e-52 | 1.592512e-49 |
| MsG0180001712.01 | MsG0780041192.01 | 0.804246 | 2.368313e-49 | 1.215035e-46 |
| MsG0180001712.01 | MsG0780041294.01 | 0.825233 | 5.240528e-54 | 4.749067e-51 |
| MsG0180001712.01 | MsG0780041300.01 | 0.825090 | 5.665834e-54 | 5.113711e-51 |
| MsG0180001712.01 | MsG0780041441.01 | 0.846104 | 2.678169e-59 | 4.559861e-56 |
| MsG0180001712.01 | MsG0780041507.01 | 0.830887 | 2.279343e-55 | 2.433496e-52 |
| MsG0180001712.01 | MsG0880042053.01 | 0.835505 | 1.613592e-56 | 1.977139e-53 |
| MsG0180001712.01 | MsG0880042107.01 | 0.829834 | 4.123802e-55 | 4.270405e-52 |
| MsG0180001712.01 | MsG0880042118.01 | 0.818253 | 2.158696e-52 | 1.607563e-49 |
| MsG0180001712.01 | MsG0880042161.01 | 0.800559 | 1.361660e-48 | 6.359733e-46 |
| MsG0180001712.01 | MsG0880042294.01 | 0.821986 | 3.016476e-53 | 2.492298e-50 |
| MsG0180001712.01 | MsG0880042305.01 | 0.801087 | 1.062501e-48 | 5.029697e-46 |
| MsG0180001712.01 | MsG0880042314.01 | 0.809708 | 1.655921e-50 | 9.792567e-48 |
| MsG0180001712.01 | MsG0880042611.01 | 0.842586 | 2.362229e-58 | 3.598328e-55 |
| MsG0180001712.01 | MsG0880042612.01 | 0.808671 | 2.761748e-50 | 1.588702e-47 |
| MsG0180001712.01 | MsG0880042972.01 | 0.807258 | 5.517917e-50 | 3.059106e-47 |
| MsG0180001712.01 | MsG0880043002.01 | 0.804479 | 2.118011e-49 | 1.093183e-46 |
| MsG0180001712.01 | MsG0880043003.01 | 0.807381 | 5.197279e-50 | 2.890562e-47 |
| MsG0180001712.01 | MsG0880043059.01 | 0.809118 | 2.216423e-50 | 1.290272e-47 |
| MsG0180001712.01 | MsG0880043208.01 | 0.808809 | 2.580242e-50 | 1.489651e-47 |
| MsG0180001712.01 | MsG0880043287.01 | 0.829741 | 4.343721e-55 | 4.485809e-52 |
| MsG0180001712.01 | MsG0880043288.01 | 0.805770 | 1.137127e-49 | 6.067793e-47 |
| MsG0180001712.01 | MsG0880044062.01 | -0.811493 | 6.812439e-51 | 4.223169e-48 |
| MsG0180001712.01 | MsG0880044409.01 | 0.809078 | 2.259704e-50 | 1.314066e-47 |
| MsG0180001712.01 | MsG0880044573.01 | 0.803155 | 3.990087e-49 | 1.990604e-46 |
| MsG0180001712.01 | MsG0880044638.01 | 0.806640 | 7.457090e-50 | 4.068190e-47 |
| MsG0180001712.01 | MsG0880045583.01 | 0.801938 | 7.110026e-49 | 3.438700e-46 |
| MsG0180001712.01 | MsG0880045756.01 | 0.832634 | 8.451087e-56 | 9.501468e-53 |
| MsG0180001712.01 | MsG0880045869.01 | 0.809490 | 1.844021e-50 | 1.084165e-47 |
| MsG0180001712.01 | MsG0880046058.01 | 0.848656 | 5.332027e-60 | 9.854712e-57 |
| MsG0180001712.01 | MsG0880046072.01 | 0.801235 | 9.909460e-49 | 4.708299e-46 |
| MsG0180001712.01 | MsG0880046091.01 | 0.820755 | 5.800396e-53 | 4.630070e-50 |
| MsG0180001712.01 | MsG0880046244.01 | 0.841686 | 4.087009e-58 | 6.051460e-55 |
| MsG0180001712.01 | MsG0880046285.01 | 0.805755 | 1.145464e-49 | 6.110043e-47 |
| MsG0180001712.01 | MsG0880046731.01 | 0.807774 | 4.288721e-50 | 2.409704e-47 |
| MsG0180001712.01 | MsG0880046733.01 | 0.818225 | 2.190127e-52 | 1.629755e-49 |
| MsG0180001712.01 | MsG0880046921.01 | 0.800534 | 1.377710e-48 | 6.430534e-46 |
| MsG0180001712.01 | MsG0880046973.01 | 0.831959 | 1.242164e-55 | 1.369010e-52 |
| MsG0180001712.01 | MsG0880047019.01 | 0.812925 | 3.316903e-51 | 2.136083e-48 |
| MsG0180001712.01 | MsG0880047116.01 | 0.813822 | 2.106568e-51 | 1.390094e-48 |
| MsG0180001712.01 | MsG0880047143.01 | 0.813829 | 2.099323e-51 | 1.385550e-48 |
| MsG0180001712.01 | MsG0880047425.01 | 0.811427 | 7.040367e-51 | 4.356898e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001712.01.T01 | MTR_1g041475 | 96.715 | 274 | 9 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| MsG0180001712.01.T01 | MTR_1g075730 | 60.949 | 274 | 107 | 0 | 1 | 274 | 1 | 274 | 2.03e-121 | 348 |
| MsG0180001712.01.T01 | MTR_1g075730 | 60.072 | 278 | 107 | 1 | 1 | 274 | 1 | 278 | 4.59e-119 | 342 |
| MsG0180001712.01.T01 | MTR_8g463130 | 37.500 | 256 | 130 | 6 | 41 | 273 | 5 | 253 | 1.33e-38 | 136 |
| MsG0180001712.01.T01 | MTR_8g463130 | 37.500 | 256 | 130 | 6 | 41 | 273 | 33 | 281 | 2.05e-38 | 136 |
| MsG0180001712.01.T01 | MTR_2g008850 | 34.457 | 267 | 145 | 5 | 30 | 273 | 21 | 280 | 1.46e-34 | 126 |
| MsG0180001712.01.T01 | MTR_4g094208 | 32.143 | 280 | 160 | 5 | 17 | 273 | 4 | 276 | 4.35e-34 | 125 |
| MsG0180001712.01.T01 | MTR_2g008850 | 35.841 | 226 | 120 | 4 | 71 | 273 | 11 | 234 | 2.80e-33 | 121 |
| MsG0180001712.01.T01 | MTR_5g063940 | 35.398 | 226 | 121 | 4 | 71 | 273 | 11 | 234 | 4.42e-33 | 121 |
| MsG0180001712.01.T01 | MTR_2g078760 | 35.938 | 256 | 134 | 6 | 41 | 273 | 5 | 253 | 6.17e-33 | 121 |
| MsG0180001712.01.T01 | MTR_2g078760 | 35.938 | 256 | 134 | 6 | 41 | 273 | 84 | 332 | 2.07e-32 | 122 |
| MsG0180001712.01.T01 | MTR_5g063940 | 35.398 | 226 | 121 | 4 | 71 | 273 | 58 | 281 | 3.45e-32 | 120 |
| MsG0180001712.01.T01 | MTR_7g083300 | 71.084 | 83 | 18 | 3 | 79 | 159 | 14 | 92 | 1.58e-29 | 107 |
| MsG0180001712.01.T01 | MTR_3g074610 | 32.743 | 226 | 127 | 4 | 71 | 273 | 58 | 281 | 4.80e-28 | 109 |
| MsG0180001712.01.T01 | MTR_4g094542 | 32.031 | 256 | 143 | 5 | 41 | 273 | 117 | 364 | 5.49e-25 | 102 |
| MsG0180001712.01.T01 | MTR_1g014640 | 28.837 | 215 | 132 | 3 | 80 | 273 | 109 | 323 | 1.49e-24 | 100 |
| MsG0180001712.01.T01 | MTR_1g013400 | 28.837 | 215 | 132 | 3 | 80 | 273 | 109 | 323 | 1.49e-24 | 100 |
| MsG0180001712.01.T01 | MTR_3g105730 | 28.372 | 215 | 133 | 3 | 80 | 273 | 44 | 258 | 1.51e-23 | 97.1 |
| MsG0180001712.01.T01 | MTR_3g105730 | 28.372 | 215 | 133 | 3 | 80 | 273 | 66 | 280 | 1.95e-23 | 97.1 |
| MsG0180001712.01.T01 | MTR_2g078760 | 35.211 | 213 | 108 | 6 | 41 | 230 | 84 | 289 | 2.01e-20 | 89.0 |
| MsG0180001712.01.T01 | MTR_1g115570 | 26.728 | 217 | 134 | 6 | 79 | 274 | 126 | 338 | 4.94e-17 | 80.1 |
| MsG0180001712.01.T01 | MTR_2g078760 | 37.931 | 145 | 81 | 3 | 41 | 183 | 84 | 221 | 5.12e-16 | 76.3 |
| MsG0180001712.01.T01 | MTR_3g091060 | 26.840 | 231 | 144 | 5 | 67 | 274 | 113 | 341 | 3.78e-14 | 72.0 |
| MsG0180001712.01.T01 | MTR_5g024340 | 26.104 | 249 | 148 | 9 | 59 | 273 | 99 | 345 | 1.10e-13 | 70.9 |
| MsG0180001712.01.T01 | MTR_4g094208 | 29.412 | 170 | 111 | 3 | 17 | 184 | 4 | 166 | 7.22e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001712.01.T01 | AT3G23360 | 43.885 | 278 | 132 | 6 | 1 | 273 | 1 | 259 | 4.47e-71 | 219 |
| MsG0180001712.01.T01 | AT4G28400 | 35.547 | 256 | 135 | 5 | 41 | 273 | 12 | 260 | 1.81e-37 | 133 |
| MsG0180001712.01.T01 | AT4G28400 | 35.547 | 256 | 135 | 5 | 41 | 273 | 34 | 282 | 2.98e-37 | 133 |
| MsG0180001712.01.T01 | AT2G20630 | 33.984 | 256 | 139 | 5 | 41 | 273 | 30 | 278 | 5.02e-37 | 132 |
| MsG0180001712.01.T01 | AT2G20630 | 33.594 | 256 | 140 | 5 | 41 | 273 | 30 | 278 | 1.08e-34 | 127 |
| MsG0180001712.01.T01 | AT3G15260 | 33.213 | 277 | 154 | 7 | 20 | 273 | 20 | 288 | 3.70e-34 | 125 |
| MsG0180001712.01.T01 | AT3G15260 | 33.213 | 277 | 154 | 7 | 20 | 273 | 20 | 288 | 3.70e-34 | 125 |
| MsG0180001712.01.T01 | AT1G22280 | 34.222 | 225 | 123 | 4 | 72 | 273 | 58 | 280 | 3.43e-30 | 115 |
| MsG0180001712.01.T01 | AT1G22280 | 33.766 | 231 | 122 | 5 | 72 | 273 | 58 | 286 | 2.29e-29 | 112 |
| MsG0180001712.01.T01 | AT1G78200 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 7.32e-29 | 110 |
| MsG0180001712.01.T01 | AT1G78200 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 7.32e-29 | 110 |
| MsG0180001712.01.T01 | AT1G78200 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 7.79e-29 | 111 |
| MsG0180001712.01.T01 | AT1G78200 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 7.79e-29 | 111 |
| MsG0180001712.01.T01 | AT1G78200 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 7.79e-29 | 111 |
| MsG0180001712.01.T01 | AT1G34750 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.09e-27 | 108 |
| MsG0180001712.01.T01 | AT1G34750 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.09e-27 | 108 |
| MsG0180001712.01.T01 | AT1G34750 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.09e-27 | 108 |
| MsG0180001712.01.T01 | AT4G31750 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 2.59e-25 | 102 |
| MsG0180001712.01.T01 | AT4G31750 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 3.14e-25 | 102 |
| MsG0180001712.01.T01 | AT4G31750 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 3.14e-25 | 102 |
| MsG0180001712.01.T01 | AT5G24940 | 29.224 | 219 | 132 | 5 | 77 | 273 | 62 | 279 | 1.79e-23 | 99.4 |
| MsG0180001712.01.T01 | AT2G34740 | 29.020 | 255 | 149 | 5 | 43 | 273 | 88 | 334 | 5.36e-23 | 96.7 |
| MsG0180001712.01.T01 | AT4G28400 | 33.333 | 213 | 112 | 5 | 41 | 230 | 34 | 239 | 1.40e-20 | 88.6 |
| MsG0180001712.01.T01 | AT5G10740 | 26.047 | 215 | 138 | 3 | 80 | 273 | 65 | 279 | 2.11e-20 | 89.7 |
| MsG0180001712.01.T01 | AT5G10740 | 26.047 | 215 | 138 | 3 | 80 | 273 | 65 | 279 | 2.11e-20 | 89.7 |
| MsG0180001712.01.T01 | AT5G53140 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 4.34e-17 | 80.9 |
| MsG0180001712.01.T01 | AT5G53140 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 4.34e-17 | 80.9 |
| MsG0180001712.01.T01 | AT2G34740 | 27.358 | 212 | 122 | 5 | 43 | 230 | 84 | 287 | 1.58e-12 | 67.0 |
| MsG0180001712.01.T01 | AT2G34740 | 27.358 | 212 | 122 | 5 | 43 | 230 | 102 | 305 | 1.59e-12 | 67.0 |
| MsG0180001712.01.T01 | AT1G34750 | 27.197 | 239 | 149 | 4 | 15 | 230 | 2 | 238 | 1.01e-11 | 63.9 |
| MsG0180001712.01.T01 | AT3G51470 | 22.634 | 243 | 159 | 6 | 59 | 273 | 42 | 283 | 1.26e-11 | 64.3 |
| MsG0180001712.01.T01 | AT3G51470 | 22.634 | 243 | 159 | 6 | 59 | 273 | 86 | 327 | 1.72e-11 | 64.3 |
Find 50 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATTAGCTTGCAAATATT+TGG | 0.174722 | 1:+25865136 | None:intergenic |
| TGCTCTCTTGAGTGTTTCTT+TGG | 0.223443 | 1:+25864564 | None:intergenic |
| ACATCTGTGATGATAATAAA+TGG | 0.273873 | 1:-25864475 | MsG0180001712.01.T01:CDS |
| TGATAAGATTCACTGCTTCT+TGG | 0.281632 | 1:+25863020 | None:intergenic |
| AACTTGTGGTTGGAAGTTAT+TGG | 0.296396 | 1:-25863300 | MsG0180001712.01.T01:CDS |
| GTGGAGCATGATTGGATTAA+TGG | 0.328700 | 1:-25865269 | MsG0180001712.01.T01:CDS |
| GAATGATTAAACATGAAATA+TGG | 0.349116 | 1:+25862927 | None:intergenic |
| TAGTACTGAATTTGTGATCT+TGG | 0.359368 | 1:-25863269 | MsG0180001712.01.T01:CDS |
| CTTAGGAATCTTTGATACTT+TGG | 0.361268 | 1:-25865174 | MsG0180001712.01.T01:CDS |
| TCTGTGATACCAATGTTTCT+TGG | 0.370921 | 1:+25864357 | None:intergenic |
| ACATGATGACCATGTGATAT+TGG | 0.372321 | 1:+25865293 | None:intergenic |
| ATATTTCATGTTTAATCATT+CGG | 0.384965 | 1:-25862925 | MsG0180001712.01.T01:CDS |
| AAGAAGCAGTGAATCTTATC+AGG | 0.393702 | 1:-25863018 | MsG0180001712.01.T01:CDS |
| TCAGATGAAACATGCATCAT+AGG | 0.400144 | 1:-25864502 | MsG0180001712.01.T01:CDS |
| GGAATCTTTGATACTTTGGT+TGG | 0.403046 | 1:-25865170 | MsG0180001712.01.T01:CDS |
| ACAAGAAGCAGCAGAGTGTT+TGG | 0.405610 | 1:-25862981 | MsG0180001712.01.T01:CDS |
| AGGGTGAAACTCTCATGTTT+AGG | 0.405777 | 1:-25865371 | MsG0180001712.01.T01:CDS |
| TCTTGGCAAGCAATGGCATA+TGG | 0.410623 | 1:-25863252 | MsG0180001712.01.T01:CDS |
| GGTGTAGCTTATCAGACAAT+TGG | 0.432674 | 1:-25864397 | MsG0180001712.01.T01:CDS |
| TTGACTTGCACAGGCACTTA+GGG | 0.438481 | 1:-25865390 | MsG0180001712.01.T01:intron |
| GTGATACAAAGAGAGCAAAT+TGG | 0.443813 | 1:-25865215 | MsG0180001712.01.T01:CDS |
| GTAAGAAGAAATCATGGAGT+TGG | 0.448595 | 1:-25865338 | MsG0180001712.01.T01:CDS |
| ATCATGTGGTGGAGCATGAT+TGG | 0.450402 | 1:-25865277 | MsG0180001712.01.T01:CDS |
| AATTATGTTAGTCTCATTTG+AGG | 0.462042 | 1:-25864594 | MsG0180001712.01.T01:intron |
| AGAAAGGTAAGAAGAAATCA+TGG | 0.465978 | 1:-25865344 | MsG0180001712.01.T01:CDS |
| TGGCTAAGGAAGCATTGGTT+AGG | 0.478204 | 1:-25862961 | MsG0180001712.01.T01:CDS |
| ATTGACTTGCACAGGCACTT+AGG | 0.481651 | 1:-25865391 | MsG0180001712.01.T01:intron |
| TGTGAATCAGGTAATGCAAC+AGG | 0.482738 | 1:-25863346 | MsG0180001712.01.T01:intron |
| AGCAGCAGAGTGTTTGGCTA+AGG | 0.497684 | 1:-25862975 | MsG0180001712.01.T01:CDS |
| GAGACAGAATTGTGGTACTT+AGG | 0.501693 | 1:-25865191 | MsG0180001712.01.T01:CDS |
| TTCTAAAGCTTCAGAACTTG+TGG | 0.505454 | 1:-25863314 | MsG0180001712.01.T01:CDS |
| AAAGCTTCAGAACTTGTGGT+TGG | 0.510242 | 1:-25863310 | MsG0180001712.01.T01:CDS |
| AAACACTCTGCTGCTTCTTG+TGG | 0.521856 | 1:+25862983 | None:intergenic |
| CTTGGCAAGCAATGGCATAT+GGG | 0.527736 | 1:-25863251 | MsG0180001712.01.T01:CDS |
| CTCATGTTTAGGAAATAGAA+AGG | 0.530586 | 1:-25865360 | MsG0180001712.01.T01:CDS |
| GTGTTTGGCTAAGGAAGCAT+TGG | 0.535898 | 1:-25862966 | MsG0180001712.01.T01:CDS |
| ATCAATCATCCAAGAAACAT+TGG | 0.538131 | 1:-25864366 | MsG0180001712.01.T01:CDS |
| GAGTTGGAAGCAAGCCATCA+TGG | 0.546613 | 1:-25865322 | MsG0180001712.01.T01:CDS |
| GAATCTTATCAGGCACATAG+AGG | 0.593854 | 1:-25863008 | MsG0180001712.01.T01:CDS |
| AGTTCTGTAATCTCCGATGT+TGG | 0.599281 | 1:+25864435 | None:intergenic |
| AGGTAATGCAACAGGTACAA+AGG | 0.604493 | 1:-25863338 | MsG0180001712.01.T01:CDS |
| TTTGTGATCTTGGCAAGCAA+TGG | 0.607158 | 1:-25863259 | MsG0180001712.01.T01:CDS |
| AAACTCATGCTAGCCAACAT+CGG | 0.635263 | 1:-25864448 | MsG0180001712.01.T01:CDS |
| ATCACATGGTCATCATGTGG+TGG | 0.639046 | 1:-25865288 | MsG0180001712.01.T01:CDS |
| GATATTGGCATCATCCATGA+TGG | 0.650715 | 1:+25865308 | None:intergenic |
| GGCAAGCAATGGCATATGGG+AGG | 0.662078 | 1:-25863248 | MsG0180001712.01.T01:intron |
| ACACTCAAGAGAGCATACCT+AGG | 0.689445 | 1:-25864556 | MsG0180001712.01.T01:CDS |
| TGGATGATGCCAATATCACA+TGG | 0.692201 | 1:-25865302 | MsG0180001712.01.T01:CDS |
| AAATTGGTGAGACAGAATTG+TGG | 0.696148 | 1:-25865199 | MsG0180001712.01.T01:CDS |
| AATATCACATGGTCATCATG+TGG | 0.739236 | 1:-25865291 | MsG0180001712.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAGAAAAAAAATATTTA+AGG | - | Chr1:25863008-25863027 | MsG0180001712.01.T01:CDS | 10.0% |
| !!! | TCGTTTTTTTAAAAATAAAT+AGG | - | Chr1:25865401-25865420 | MsG0180001712.01.T01:intron | 10.0% |
| !!! | TTATGTATATATTTCTATAA+CGG | - | Chr1:25863564-25863583 | MsG0180001712.01.T01:intron | 10.0% |
| !! | ATATTTCATGTTTAATCATT+CGG | - | Chr1:25865573-25865592 | MsG0180001712.01.T01:CDS | 15.0% |
| !! | TACTTTAATGAAAAGTAAAA+GGG | - | Chr1:25863776-25863795 | MsG0180001712.01.T01:intron | 15.0% |
| !! | TTAGAAATTTCGTAATAAAT+CGG | - | Chr1:25865370-25865389 | MsG0180001712.01.T01:CDS | 15.0% |
| !! | TTTAAGGGAAAAATAATATA+TGG | - | Chr1:25863024-25863043 | MsG0180001712.01.T01:CDS | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | + | Chr1:25864626-25864645 | None:intergenic | 15.0% |
| !! | AAGTTAACATTAACATATCT+TGG | + | Chr1:25865282-25865301 | None:intergenic | 20.0% |
| !! | AGTTAACATTAACATATCTT+GGG | + | Chr1:25865281-25865300 | None:intergenic | 20.0% |
| !! | GAATGATTAAACATGAAATA+TGG | + | Chr1:25865574-25865593 | None:intergenic | 20.0% |
| !! | GAGAAAATAGGAAATTATAT+GGG | + | Chr1:25863841-25863860 | None:intergenic | 20.0% |
| !! | GTACTTTAATGAAAAGTAAA+AGG | - | Chr1:25863775-25863794 | MsG0180001712.01.T01:intron | 20.0% |
| !! | TAACCAAATAAAAATAGATG+CGG | + | Chr1:25864424-25864443 | None:intergenic | 20.0% |
| !! | TGAGAAAATAGGAAATTATA+TGG | + | Chr1:25863842-25863861 | None:intergenic | 20.0% |
| !!! | ATAATTAGCTTGCAAATATT+TGG | + | Chr1:25863365-25863384 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | + | Chr1:25864625-25864644 | None:intergenic | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | + | Chr1:25864631-25864650 | None:intergenic | 20.0% |
| !!! | TAACTCAGAAATTTTTCTAA+CGG | + | Chr1:25865316-25865335 | None:intergenic | 20.0% |
| !!! | TTTTCATAACTTATGAAAAC+AGG | + | Chr1:25864764-25864783 | None:intergenic | 20.0% |
| ! | AAATAAAAATAGATGCGGTT+CGG | + | Chr1:25864419-25864438 | None:intergenic | 25.0% |
| ! | AATTAGTATCTATGATGCAT+AGG | + | Chr1:25864693-25864712 | None:intergenic | 25.0% |
| ! | ACATCTGTGATGATAATAAA+TGG | - | Chr1:25864023-25864042 | MsG0180001712.01.T01:intron | 25.0% |
| ! | ATGAAGAACATAATCTCATA+AGG | + | Chr1:25863057-25863076 | None:intergenic | 25.0% |
| ! | GAAAGTTTATGGATATAAGA+TGG | - | Chr1:25863649-25863668 | MsG0180001712.01.T01:intron | 25.0% |
| ! | GCAATAAATAACAATGCATT+TGG | + | Chr1:25863803-25863822 | None:intergenic | 25.0% |
| ! | TAAGCTATGAAAATAGCTTA+TGG | - | Chr1:25864805-25864824 | MsG0180001712.01.T01:intron | 25.0% |
| ! | TGAAGAACATAATCTCATAA+GGG | + | Chr1:25863056-25863075 | None:intergenic | 25.0% |
| ! | TTGGTTGTCACATTTAATAA+TGG | - | Chr1:25865095-25865114 | MsG0180001712.01.T01:intron | 25.0% |
| ! | TTTGAATGGAAGAACAAAAT+AGG | - | Chr1:25863495-25863514 | MsG0180001712.01.T01:intron | 25.0% |
| !! | AATTATGTTAGTCTCATTTG+AGG | - | Chr1:25863904-25863923 | MsG0180001712.01.T01:intron | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | + | Chr1:25864495-25864514 | None:intergenic | 25.0% |
| !! | CTATAAGTGAGTATATGTTT+TGG | - | Chr1:25865076-25865095 | MsG0180001712.01.T01:intron | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | - | Chr1:25864506-25864525 | MsG0180001712.01.T01:CDS | 25.0% |
| !! | TCTATTTTCATAAGCTATCA+TGG | - | Chr1:25863627-25863646 | MsG0180001712.01.T01:intron | 25.0% |
| !! | TTTTCATAGCTTATGAAAAC+AGG | + | Chr1:25864798-25864817 | None:intergenic | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | - | Chr1:25864507-25864526 | MsG0180001712.01.T01:CDS | 25.0% |
| AAATTTGACGTATTACGTAC+CGG | - | Chr1:25864641-25864660 | MsG0180001712.01.T01:intron | 30.0% | |
| AAGCTATCATGGAAAGTTTA+TGG | - | Chr1:25863638-25863657 | MsG0180001712.01.T01:intron | 30.0% | |
| AATCCAAAAAAACCCTAACT+AGG | - | Chr1:25864907-25864926 | MsG0180001712.01.T01:intron | 30.0% | |
| AGAAAGGTAAGAAGAAATCA+TGG | - | Chr1:25863154-25863173 | MsG0180001712.01.T01:intron | 30.0% | |
| ATCAATCATCCAAGAAACAT+TGG | - | Chr1:25864132-25864151 | MsG0180001712.01.T01:intron | 30.0% | |
| CTCATGTTTAGGAAATAGAA+AGG | - | Chr1:25863138-25863157 | MsG0180001712.01.T01:intron | 30.0% | |
| CTTAGGAATCTTTGATACTT+TGG | - | Chr1:25863324-25863343 | MsG0180001712.01.T01:CDS | 30.0% | |
| CTTATTCCATTGTTACATGA+AGG | - | Chr1:25862973-25862992 | MsG0180001712.01.T01:CDS | 30.0% | |
| GTCTTTGCTTGTTTACTTAT+TGG | - | Chr1:25863751-25863770 | MsG0180001712.01.T01:intron | 30.0% | |
| TCATCACCTACAAAATACAT+AGG | + | Chr1:25865454-25865473 | None:intergenic | 30.0% | |
| ! | AGATTTTCACTTCAAAGTCA+AGG | - | Chr1:25862927-25862946 | MsG0180001712.01.T01:CDS | 30.0% |
| ! | ATCAATGATGCTTTTGAACT+TGG | - | Chr1:25863466-25863485 | MsG0180001712.01.T01:intron | 30.0% |
| ! | CCAGAAGTATATGAGAAAAT+AGG | + | Chr1:25863853-25863872 | None:intergenic | 30.0% |
| ! | CCTATTTTCTCATATACTTC+TGG | - | Chr1:25863850-25863869 | MsG0180001712.01.T01:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | - | Chr1:25864505-25864524 | MsG0180001712.01.T01:CDS | 30.0% |
| ! | TAGTACTGAATTTGTGATCT+TGG | - | Chr1:25865229-25865248 | MsG0180001712.01.T01:CDS | 30.0% |
| ! | TCAATGATGCTTTTGAACTT+GGG | - | Chr1:25863467-25863486 | MsG0180001712.01.T01:intron | 30.0% |
| ! | TTCTGAGTTAAACATTTTCG+AGG | - | Chr1:25865326-25865345 | MsG0180001712.01.T01:CDS | 30.0% |
| ! | TTTTGACAAGAATCTCAAAG+AGG | - | Chr1:25863384-25863403 | MsG0180001712.01.T01:intron | 30.0% |
| !! | AACTGATTTGTTTCCTAGTT+AGG | + | Chr1:25864923-25864942 | None:intergenic | 30.0% |
| !! | ACTGATTTGTTTCCTAGTTA+GGG | + | Chr1:25864922-25864941 | None:intergenic | 30.0% |
| !! | ATATACTAATCTCTGAAGCA+TGG | - | Chr1:25864316-25864335 | MsG0180001712.01.T01:intron | 30.0% |
| !! | GTTCAAAAGCATCATTGATT+TGG | + | Chr1:25863465-25863484 | None:intergenic | 30.0% |
| !! | TATACTAATCTCTGAAGCAT+GGG | - | Chr1:25864317-25864336 | MsG0180001712.01.T01:intron | 30.0% |
| !! | TCCATCTTTTTCATTCAACT+GGG | - | Chr1:25864973-25864992 | MsG0180001712.01.T01:intron | 30.0% |
| !! | TTTGGTTATTTTGTCGTAGT+TGG | - | Chr1:25864436-25864455 | MsG0180001712.01.T01:CDS | 30.0% |
| !!! | GAACCGCATCTATTTTTATT+TGG | - | Chr1:25864418-25864437 | MsG0180001712.01.T01:CDS | 30.0% |
| !!! | TTTCCTAGTTAGGGTTTTTT+TGG | + | Chr1:25864913-25864932 | None:intergenic | 30.0% |
| AAAGAGCCTTCATGTAACAA+TGG | + | Chr1:25862982-25863001 | None:intergenic | 35.0% | |
| AAAGTAACAGCATGTGAATC+AGG | - | Chr1:25865140-25865159 | MsG0180001712.01.T01:CDS | 35.0% | |
| AAATTGGTGAGACAGAATTG+TGG | - | Chr1:25863299-25863318 | MsG0180001712.01.T01:CDS | 35.0% | |
| AACTTGTGGTTGGAAGTTAT+TGG | - | Chr1:25865198-25865217 | MsG0180001712.01.T01:CDS | 35.0% | |
| AAGAAGCAGTGAATCTTATC+AGG | - | Chr1:25865480-25865499 | MsG0180001712.01.T01:intron | 35.0% | |
| AATATCACATGGTCATCATG+TGG | - | Chr1:25863207-25863226 | MsG0180001712.01.T01:intron | 35.0% | |
| AATGACTATGACGATCCATT+TGG | - | Chr1:25864213-25864232 | MsG0180001712.01.T01:intron | 35.0% | |
| ACATGATGACCATGTGATAT+TGG | + | Chr1:25863208-25863227 | None:intergenic | 35.0% | |
| ACTGTCATAAGCATTTGAGA+TGG | + | Chr1:25864866-25864885 | None:intergenic | 35.0% | |
| ATGACTATGACGATCCATTT+GGG | - | Chr1:25864214-25864233 | MsG0180001712.01.T01:intron | 35.0% | |
| GGAATCTTTGATACTTTGGT+TGG | - | Chr1:25863328-25863347 | MsG0180001712.01.T01:CDS | 35.0% | |
| GTAAGAAGAAATCATGGAGT+TGG | - | Chr1:25863160-25863179 | MsG0180001712.01.T01:intron | 35.0% | |
| GTATCTATGATGCATAGGTA+CGG | + | Chr1:25864688-25864707 | None:intergenic | 35.0% | |
| GTGATACAAAGAGAGCAAAT+TGG | - | Chr1:25863283-25863302 | MsG0180001712.01.T01:CDS | 35.0% | |
| TATCTATGATGCATAGGTAC+GGG | + | Chr1:25864687-25864706 | None:intergenic | 35.0% | |
| TCAGATGAAACATGCATCAT+AGG | - | Chr1:25863996-25864015 | MsG0180001712.01.T01:intron | 35.0% | |
| TCCCAGTTGAATGAAAAAGA+TGG | + | Chr1:25864977-25864996 | None:intergenic | 35.0% | |
| TCTGTGATACCAATGTTTCT+TGG | + | Chr1:25864144-25864163 | None:intergenic | 35.0% | |
| TGATAAGATTCACTGCTTCT+TGG | + | Chr1:25865481-25865500 | None:intergenic | 35.0% | |
| ! | AGAACTGTTTTGTGTAGAGA+TGG | - | Chr1:25864080-25864099 | MsG0180001712.01.T01:intron | 35.0% |
| ! | AGATGGTCTTGAAGAACTTA+TGG | + | Chr1:25864849-25864868 | None:intergenic | 35.0% |
| ! | GAGTCTCCTATGTATTTTGT+AGG | - | Chr1:25865445-25865464 | MsG0180001712.01.T01:intron | 35.0% |
| !! | CTCCATCTTTTTCATTCAAC+TGG | - | Chr1:25864972-25864991 | MsG0180001712.01.T01:intron | 35.0% |
| !! | GAATTTCTATTGACTTGCAC+AGG | - | Chr1:25863099-25863118 | MsG0180001712.01.T01:intron | 35.0% |
| !! | TTCTAAAGCTTCAGAACTTG+TGG | - | Chr1:25865184-25865203 | MsG0180001712.01.T01:CDS | 35.0% |
| !!! | TGATCTTTGTTTTTGCACCT+AGG | + | Chr1:25863962-25863981 | None:intergenic | 35.0% |
| !!! | TGGTATCACAGACTTTTTTC+AGG | - | Chr1:25864152-25864171 | MsG0180001712.01.T01:intron | 35.0% |
| AAACTCATGCTAGCCAACAT+CGG | - | Chr1:25864050-25864069 | MsG0180001712.01.T01:intron | 40.0% | |
| AAAGCTTCAGAACTTGTGGT+TGG | - | Chr1:25865188-25865207 | MsG0180001712.01.T01:CDS | 40.0% | |
| AGGGTGAAACTCTCATGTTT+AGG | - | Chr1:25863127-25863146 | MsG0180001712.01.T01:intron | 40.0% | |
| AGGTAATGCAACAGGTACAA+AGG | - | Chr1:25865160-25865179 | MsG0180001712.01.T01:CDS | 40.0% | |
| AGTTCTGTAATCTCCGATGT+TGG | + | Chr1:25864066-25864085 | None:intergenic | 40.0% | |
| CCATTTGGGAGATGGAAATT+AGG | - | Chr1:25864228-25864247 | MsG0180001712.01.T01:intron | 40.0% | |
| CCTAATTTCCATCTCCCAAA+TGG | + | Chr1:25864231-25864250 | None:intergenic | 40.0% | |
| GAATCTTATCAGGCACATAG+AGG | - | Chr1:25865490-25865509 | MsG0180001712.01.T01:intron | 40.0% | |
| GAGACAGAATTGTGGTACTT+AGG | - | Chr1:25863307-25863326 | MsG0180001712.01.T01:CDS | 40.0% | |
| GATATTGGCATCATCCATGA+TGG | + | Chr1:25863193-25863212 | None:intergenic | 40.0% | |
| GATGGAAATTAGGTCGTGTT+TGG | - | Chr1:25864238-25864257 | MsG0180001712.01.T01:intron | 40.0% | |
| GGTGTAGCTTATCAGACAAT+TGG | - | Chr1:25864101-25864120 | MsG0180001712.01.T01:intron | 40.0% | |
| GTGGAGCATGATTGGATTAA+TGG | - | Chr1:25863229-25863248 | MsG0180001712.01.T01:intron | 40.0% | |
| TGCTCTCTTGAGTGTTTCTT+TGG | + | Chr1:25863937-25863956 | None:intergenic | 40.0% | |
| TGGATGATGCCAATATCACA+TGG | - | Chr1:25863196-25863215 | MsG0180001712.01.T01:intron | 40.0% | |
| TGTGAATCAGGTAATGCAAC+AGG | - | Chr1:25865152-25865171 | MsG0180001712.01.T01:CDS | 40.0% | |
| TTTGTGATCTTGGCAAGCAA+TGG | - | Chr1:25865239-25865258 | MsG0180001712.01.T01:CDS | 40.0% | |
| ! | GAACTTGGGAGACTTTTGAA+TGG | - | Chr1:25863481-25863500 | MsG0180001712.01.T01:intron | 40.0% |
| AAGCATGGGTACTCCAAACA+TGG | - | Chr1:25864331-25864350 | MsG0180001712.01.T01:intron | 45.0% | |
| ATCACATGGTCATCATGTGG+TGG | - | Chr1:25863210-25863229 | MsG0180001712.01.T01:intron | 45.0% | |
| ATGACGATCCATTTGGGAGA+TGG | - | Chr1:25864220-25864239 | MsG0180001712.01.T01:intron | 45.0% | |
| ATGATGCATAGGTACGGGTA+CGG | + | Chr1:25864682-25864701 | None:intergenic | 45.0% | |
| CTTGGCAAGCAATGGCATAT+GGG | - | Chr1:25865247-25865266 | MsG0180001712.01.T01:CDS | 45.0% | |
| GCTAATTCAGTGCTGCATTC+TGG | + | Chr1:25864953-25864972 | None:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | + | Chr1:25864347-25864366 | None:intergenic | 45.0% | |
| TCTTGGCAAGCAATGGCATA+TGG | - | Chr1:25865246-25865265 | MsG0180001712.01.T01:CDS | 45.0% | |
| ! | AAACACTCTGCTGCTTCTTG+TGG | + | Chr1:25865518-25865537 | None:intergenic | 45.0% |
| ! | AAATGAAGGTACGGGTACGT+TGG | + | Chr1:25864617-25864636 | None:intergenic | 45.0% |
| ! | ACAAGAAGCAGCAGAGTGTT+TGG | - | Chr1:25865517-25865536 | MsG0180001712.01.T01:intron | 45.0% |
| ! | ACACTCAAGAGAGCATACCT+AGG | - | Chr1:25863942-25863961 | MsG0180001712.01.T01:intron | 45.0% |
| ! | ATCATGTGGTGGAGCATGAT+TGG | - | Chr1:25863221-25863240 | MsG0180001712.01.T01:intron | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | - | Chr1:25864342-25864361 | MsG0180001712.01.T01:intron | 45.0% |
| ! | GTGTTTGGCTAAGGAAGCAT+TGG | - | Chr1:25865532-25865551 | MsG0180001712.01.T01:intron | 45.0% |
| !! | ATTGACTTGCACAGGCACTT+AGG | - | Chr1:25863107-25863126 | MsG0180001712.01.T01:intron | 45.0% |
| !! | TGGCTAAGGAAGCATTGGTT+AGG | - | Chr1:25865537-25865556 | MsG0180001712.01.T01:intron | 45.0% |
| !! | TTGACTTGCACAGGCACTTA+GGG | - | Chr1:25863108-25863127 | MsG0180001712.01.T01:intron | 45.0% |
| !! | ATAAGAAAAAAAATATTTAA+GGG | - | Chr1:25863009-25863028 | MsG0180001712.01.T01:CDS | 5.0% |
| GAGTTGGAAGCAAGCCATCA+TGG | - | Chr1:25863176-25863195 | MsG0180001712.01.T01:intron | 50.0% | |
| GTTGGTGCAGCAAAAACGTG+CGG | - | Chr1:25864454-25864473 | MsG0180001712.01.T01:CDS | 50.0% | |
| TACCATACGCGTACCTGGTA+CGG | + | Chr1:25864382-25864401 | None:intergenic | 50.0% | |
| TTGGTGCAGCAAAAACGTGC+GGG | - | Chr1:25864455-25864474 | MsG0180001712.01.T01:CDS | 50.0% | |
| ! | AGCAGCAGAGTGTTTGGCTA+AGG | - | Chr1:25865523-25865542 | MsG0180001712.01.T01:intron | 50.0% |
| ! | TTACGTACCGGTACCAGTAC+CGG | - | Chr1:25864653-25864672 | MsG0180001712.01.T01:intron | 50.0% |
| !! | ACATGGAGAAGTACCGGTAC+CGG | - | Chr1:25864348-25864367 | MsG0180001712.01.T01:CDS | 50.0% |
| ACCATACGCGTACCTGGTAC+GGG | + | Chr1:25864381-25864400 | None:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+TGG | + | Chr1:25864387-25864406 | None:intergenic | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | + | Chr1:25864675-25864694 | None:intergenic | 55.0% | |
| GGCAAGCAATGGCATATGGG+AGG | - | Chr1:25865250-25865269 | MsG0180001712.01.T01:CDS | 55.0% | |
| ! | TACGTACCGGTACCAGTACC+GGG | - | Chr1:25864654-25864673 | MsG0180001712.01.T01:intron | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | - | Chr1:25864349-25864368 | MsG0180001712.01.T01:CDS | 55.0% |
| ACCCGTACCAGGTACGCGTA+TGG | - | Chr1:25864377-25864396 | MsG0180001712.01.T01:CDS | 60.0% | |
| !! | ACGGTACCCGGTACTGGTAC+CGG | + | Chr1:25864663-25864682 | None:intergenic | 60.0% |
| ACCTGGTACGGGTGCGTACC+CGG | + | Chr1:25864370-25864389 | None:intergenic | 65.0% | |
| ACGGGTACGGTACCCGGTAC+TGG | + | Chr1:25864669-25864688 | None:intergenic | 65.0% | |
| TACGGGTGCGTACCCGGTAC+CGG | + | Chr1:25864364-25864383 | None:intergenic | 65.0% | |
| ACCGGGTACGCACCCGTACC+AGG | - | Chr1:25864366-25864385 | MsG0180001712.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 25862916 | 25865604 | 25862916 | ID=MsG0180001712.01;Name=MsG0180001712.01 |
| Chr1 | mRNA | 25862916 | 25865604 | 25862916 | ID=MsG0180001712.01.T01;Parent=MsG0180001712.01;Name=MsG0180001712.01.T01;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|5|0|274 |
| Chr1 | exon | 25865572 | 25865604 | 25865572 | ID=MsG0180001712.01.T01:exon:40967;Parent=MsG0180001712.01.T01 |
| Chr1 | exon | 25865115 | 25865399 | 25865115 | ID=MsG0180001712.01.T01:exon:40966;Parent=MsG0180001712.01.T01 |
| Chr1 | exon | 25864347 | 25864605 | 25864347 | ID=MsG0180001712.01.T01:exon:40965;Parent=MsG0180001712.01.T01 |
| Chr1 | exon | 25863249 | 25863358 | 25863249 | ID=MsG0180001712.01.T01:exon:40964;Parent=MsG0180001712.01.T01 |
| Chr1 | exon | 25862916 | 25863053 | 25862916 | ID=MsG0180001712.01.T01:exon:40963;Parent=MsG0180001712.01.T01 |
| Chr1 | CDS | 25865572 | 25865604 | 25865572 | ID=MsG0180001712.01.T01:cds;Parent=MsG0180001712.01.T01 |
| Chr1 | CDS | 25865115 | 25865399 | 25865115 | ID=MsG0180001712.01.T01:cds;Parent=MsG0180001712.01.T01 |
| Chr1 | CDS | 25864347 | 25864605 | 25864347 | ID=MsG0180001712.01.T01:cds;Parent=MsG0180001712.01.T01 |
| Chr1 | CDS | 25863249 | 25863358 | 25863249 | ID=MsG0180001712.01.T01:cds;Parent=MsG0180001712.01.T01 |
| Chr1 | CDS | 25862916 | 25863053 | 25862916 | ID=MsG0180001712.01.T01:cds;Parent=MsG0180001712.01.T01 |
| Gene Sequence |
| Protein sequence |
