Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005268.01.T01 | ACJ85255.1 | 94.944 | 178 | 9 | 0 | 1 | 178 | 40 | 217 | 1.43E-122 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005268.01.T01 | Q6GKV1 | 64.773 | 176 | 61 | 1 | 4 | 178 | 147 | 322 | 1.47E-83 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005268.01.T01 | B7FKH1 | 94.944 | 178 | 9 | 0 | 1 | 178 | 40 | 217 | 6.85e-123 | 355 |
| MsG0180005268.01.T01 | G7I9N6 | 94.944 | 178 | 9 | 0 | 1 | 178 | 142 | 319 | 2.60e-122 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047790.01 | MsG0180005268.01 | -0.806303 | 8.782542e-50 | 4.750519e-47 |
| MsG0080048197.01 | MsG0180005268.01 | 0.833972 | 3.922703e-56 | 4.591009e-53 |
| MsG0080048843.01 | MsG0180005268.01 | 0.836408 | 9.524254e-57 | 1.199135e-53 |
| MsG0080048968.01 | MsG0180005268.01 | 0.886955 | 2.178924e-72 | 1.589046e-68 |
| MsG0080049135.01 | MsG0180005268.01 | 0.809752 | 1.620006e-50 | 9.591673e-48 |
| MsG0180000055.01 | MsG0180005268.01 | 0.836803 | 7.552276e-57 | 9.622602e-54 |
| MsG0180000157.01 | MsG0180005268.01 | 0.846648 | 1.903268e-59 | 3.298553e-56 |
| MsG0180000318.01 | MsG0180005268.01 | -0.803903 | 2.792043e-49 | 1.419984e-46 |
| MsG0180000339.01 | MsG0180005268.01 | 0.827362 | 1.631070e-54 | 1.571414e-51 |
| MsG0180000363.01 | MsG0180005268.01 | 0.881801 | 1.774045e-70 | 1.053829e-66 |
| MsG0180000384.01 | MsG0180005268.01 | 0.805303 | 1.424664e-49 | 7.511065e-47 |
| MsG0180000611.01 | MsG0180005268.01 | 0.908182 | 2.260980e-81 | 4.146528e-77 |
| MsG0180000669.01 | MsG0180005268.01 | 0.832388 | 9.728103e-56 | 1.085703e-52 |
| MsG0180000680.01 | MsG0180005268.01 | 0.820166 | 7.918314e-53 | 6.218607e-50 |
| MsG0180001043.01 | MsG0180005268.01 | 0.848566 | 5.647753e-60 | 1.040765e-56 |
| MsG0180001151.01 | MsG0180005268.01 | 0.807427 | 5.083037e-50 | 2.830354e-47 |
| MsG0180001355.01 | MsG0180005268.01 | 0.806977 | 6.330373e-50 | 3.483847e-47 |
| MsG0180001599.01 | MsG0180005268.01 | 0.829918 | 3.933969e-55 | 4.083147e-52 |
| MsG0180001712.01 | MsG0180005268.01 | 0.831621 | 1.504449e-55 | 1.641531e-52 |
| MsG0180001921.01 | MsG0180005268.01 | 0.846538 | 2.040098e-59 | 3.522816e-56 |
| MsG0180002140.01 | MsG0180005268.01 | 0.832737 | 7.971072e-56 | 8.988968e-53 |
| MsG0180002283.01 | MsG0180005268.01 | 0.812862 | 3.423618e-51 | 2.201081e-48 |
| MsG0180002547.01 | MsG0180005268.01 | 0.809537 | 1.801470e-50 | 1.060505e-47 |
| MsG0180003174.01 | MsG0180005268.01 | 0.800943 | 1.136925e-48 | 5.362318e-46 |
| MsG0180003252.01 | MsG0180005268.01 | 0.803397 | 3.554325e-49 | 1.784280e-46 |
| MsG0180003357.01 | MsG0180005268.01 | 0.804464 | 2.133094e-49 | 1.100548e-46 |
| MsG0180003379.01 | MsG0180005268.01 | 0.823742 | 1.176128e-53 | 1.021542e-50 |
| MsG0180003510.01 | MsG0180005268.01 | 0.800443 | 1.437948e-48 | 6.696297e-46 |
| MsG0180003567.01 | MsG0180005268.01 | 0.808167 | 3.537612e-50 | 2.008436e-47 |
| MsG0180003807.01 | MsG0180005268.01 | 0.808054 | 3.739800e-50 | 2.116744e-47 |
| MsG0180004016.01 | MsG0180005268.01 | 0.829632 | 4.617866e-55 | 4.753080e-52 |
| MsG0180004128.01 | MsG0180005268.01 | 0.855431 | 6.339603e-62 | 1.463372e-58 |
| MsG0180004130.01 | MsG0180005268.01 | 0.814225 | 1.716934e-51 | 1.145389e-48 |
| MsG0180004767.01 | MsG0180005268.01 | 0.839575 | 1.459472e-57 | 2.023897e-54 |
| MsG0180004824.01 | MsG0180005268.01 | 0.859144 | 5.069033e-63 | 1.325115e-59 |
| MsG0180004843.01 | MsG0180005268.01 | 0.800976 | 1.119562e-48 | 5.284853e-46 |
| MsG0180005106.01 | MsG0180005268.01 | 0.878988 | 1.798367e-69 | 9.585849e-66 |
| MsG0180005160.01 | MsG0180005268.01 | 0.814995 | 1.159856e-51 | 7.900458e-49 |
| MsG0180005268.01 | MsG0180005306.01 | 0.821223 | 4.526492e-53 | 3.660798e-50 |
| MsG0180005268.01 | MsG0180005382.01 | 0.828976 | 6.663138e-55 | 6.726856e-52 |
| MsG0180005268.01 | MsG0180005786.01 | 0.800502 | 1.398564e-48 | 6.522527e-46 |
| MsG0180005268.01 | MsG0180005787.01 | 0.819168 | 1.337807e-52 | 1.021766e-49 |
| MsG0180005268.01 | MsG0180005913.01 | 0.848018 | 8.008709e-60 | 1.449778e-56 |
| MsG0180005268.01 | MsG0180005944.01 | 0.808631 | 2.817371e-50 | 1.618931e-47 |
| MsG0180005268.01 | MsG0180006016.01 | 0.802056 | 6.722901e-49 | 3.261361e-46 |
| MsG0180005268.01 | MsG0180006046.01 | 0.837320 | 5.573332e-57 | 7.212825e-54 |
| MsG0180005268.01 | MsG0180006138.01 | 0.813584 | 2.376585e-51 | 1.558174e-48 |
| MsG0180005268.01 | MsG0280006302.01 | -0.841949 | 3.482735e-58 | 5.199761e-55 |
| MsG0180005268.01 | MsG0280006501.01 | 0.801727 | 7.853771e-49 | 3.778091e-46 |
| MsG0180005268.01 | MsG0280006595.01 | 0.802575 | 5.256685e-49 | 2.583931e-46 |
| MsG0180005268.01 | MsG0280006634.01 | 0.801031 | 1.090744e-48 | 5.156105e-46 |
| MsG0180005268.01 | MsG0280006679.01 | 0.815652 | 8.283399e-52 | 5.744993e-49 |
| MsG0180005268.01 | MsG0280006682.01 | 0.833784 | 4.369831e-56 | 5.085083e-53 |
| MsG0180005268.01 | MsG0280006708.01 | 0.820562 | 6.425148e-53 | 5.101233e-50 |
| MsG0180005268.01 | MsG0280006852.01 | 0.845405 | 4.144435e-59 | 6.899349e-56 |
| MsG0180005268.01 | MsG0280006931.01 | 0.801616 | 8.278383e-49 | 3.971101e-46 |
| MsG0180005268.01 | MsG0280007109.01 | 0.810619 | 1.053290e-50 | 6.379882e-48 |
| MsG0180005268.01 | MsG0280007165.01 | -0.822219 | 2.662863e-53 | 2.214893e-50 |
| MsG0180005268.01 | MsG0280007440.01 | 0.838836 | 2.269383e-57 | 3.076613e-54 |
| MsG0180005268.01 | MsG0280007441.01 | 0.875532 | 2.862003e-68 | 1.340897e-64 |
| MsG0180005268.01 | MsG0280007585.01 | 0.819672 | 1.026925e-52 | 7.954226e-50 |
| MsG0180005268.01 | MsG0280007691.01 | 0.811992 | 5.304240e-51 | 3.332032e-48 |
| MsG0180005268.01 | MsG0280007710.01 | 0.803251 | 3.810414e-49 | 1.905643e-46 |
| MsG0180005268.01 | MsG0280007714.01 | 0.823990 | 1.028660e-53 | 8.996000e-51 |
| MsG0180005268.01 | MsG0280007775.01 | 0.803095 | 4.104269e-49 | 2.044322e-46 |
| MsG0180005268.01 | MsG0280007776.01 | 0.814614 | 1.408323e-51 | 9.494818e-49 |
| MsG0180005268.01 | MsG0280007847.01 | 0.823159 | 1.609294e-53 | 1.374791e-50 |
| MsG0180005268.01 | MsG0280008104.01 | 0.811101 | 8.285088e-51 | 5.083160e-48 |
| MsG0180005268.01 | MsG0280009235.01 | 0.822700 | 2.058846e-53 | 1.736193e-50 |
| MsG0180005268.01 | MsG0280009270.01 | 0.819382 | 1.196036e-52 | 9.188844e-50 |
| MsG0180005268.01 | MsG0280009441.01 | 0.822712 | 2.046110e-53 | 1.725989e-50 |
| MsG0180005268.01 | MsG0280009554.01 | 0.858524 | 7.766996e-63 | 1.987929e-59 |
| MsG0180005268.01 | MsG0280009575.01 | 0.844981 | 5.397795e-59 | 8.865558e-56 |
| MsG0180005268.01 | MsG0280009598.01 | 0.835978 | 1.224605e-56 | 1.522027e-53 |
| MsG0180005268.01 | MsG0280009649.01 | 0.806844 | 6.752725e-50 | 3.703697e-47 |
| MsG0180005268.01 | MsG0280010013.01 | 0.811799 | 5.842279e-51 | 3.651058e-48 |
| MsG0180005268.01 | MsG0280010205.01 | 0.855542 | 5.881972e-62 | 1.362618e-58 |
| MsG0180005268.01 | MsG0280010411.01 | 0.821832 | 3.273425e-53 | 2.692981e-50 |
| MsG0180005268.01 | MsG0280010423.01 | -0.801219 | 9.984916e-49 | 4.742112e-46 |
| MsG0180005268.01 | MsG0280010560.01 | 0.801613 | 8.290684e-49 | 3.976699e-46 |
| MsG0180005268.01 | MsG0280010776.01 | 0.814719 | 1.335128e-51 | 9.026921e-49 |
| MsG0180005268.01 | MsG0280010900.01 | 0.816008 | 6.898410e-52 | 4.831051e-49 |
| MsG0180005268.01 | MsG0280011043.01 | 0.836659 | 8.222599e-57 | 1.042981e-53 |
| MsG0180005268.01 | MsG0280011141.01 | 0.835104 | 2.037216e-56 | 2.466102e-53 |
| MsG0180005268.01 | MsG0280011235.01 | 0.807634 | 4.592194e-50 | 2.570828e-47 |
| MsG0180005268.01 | MsG0280011287.01 | 0.817613 | 3.011335e-52 | 2.203526e-49 |
| MsG0180005268.01 | MsG0280011371.01 | 0.858743 | 6.680006e-63 | 1.722468e-59 |
| MsG0180005268.01 | MsG0380011614.01 | 0.848160 | 7.316120e-60 | 1.330443e-56 |
| MsG0180005268.01 | MsG0380011704.01 | 0.845222 | 4.646084e-59 | 7.689043e-56 |
| MsG0180005268.01 | MsG0380011927.01 | 0.810692 | 1.015659e-50 | 6.164140e-48 |
| MsG0180005268.01 | MsG0380012186.01 | 0.803583 | 3.253475e-49 | 1.641142e-46 |
| MsG0180005268.01 | MsG0380013471.01 | 0.811445 | 6.974913e-51 | 4.318558e-48 |
| MsG0180005268.01 | MsG0380014330.01 | 0.816600 | 5.085744e-52 | 3.619654e-49 |
| MsG0180005268.01 | MsG0380014885.01 | 0.804879 | 1.747930e-49 | 9.116371e-47 |
| MsG0180005268.01 | MsG0380014908.01 | 0.854020 | 1.624680e-61 | 3.579364e-58 |
| MsG0180005268.01 | MsG0380015166.01 | 0.806437 | 8.230527e-50 | 4.467165e-47 |
| MsG0180005268.01 | MsG0380015220.01 | 0.806346 | 8.600642e-50 | 4.657205e-47 |
| MsG0180005268.01 | MsG0380015512.01 | 0.804609 | 1.989528e-49 | 1.030339e-46 |
| MsG0180005268.01 | MsG0380015560.01 | 0.820854 | 5.505441e-53 | 4.406916e-50 |
| MsG0180005268.01 | MsG0380015607.01 | 0.806447 | 8.191328e-50 | 4.447026e-47 |
| MsG0180005268.01 | MsG0380015818.01 | 0.862992 | 3.419249e-64 | 1.020699e-60 |
| MsG0180005268.01 | MsG0380015934.01 | 0.804517 | 2.079605e-49 | 1.074384e-46 |
| MsG0180005268.01 | MsG0380016117.01 | 0.828088 | 1.091871e-54 | 1.074304e-51 |
| MsG0180005268.01 | MsG0380016560.01 | 0.804415 | 2.183979e-49 | 1.125366e-46 |
| MsG0180005268.01 | MsG0380016740.01 | 0.813241 | 2.827158e-51 | 1.836249e-48 |
| MsG0180005268.01 | MsG0380016859.01 | 0.807288 | 5.438704e-50 | 3.017546e-47 |
| MsG0180005268.01 | MsG0380016905.01 | 0.802287 | 6.027514e-49 | 2.941317e-46 |
| MsG0180005268.01 | MsG0380017003.01 | 0.827407 | 1.591859e-54 | 1.535537e-51 |
| MsG0180005268.01 | MsG0380017126.01 | 0.804901 | 1.728965e-49 | 9.022756e-47 |
| MsG0180005268.01 | MsG0380017229.01 | 0.809726 | 1.640913e-50 | 9.708636e-48 |
| MsG0180005268.01 | MsG0380017279.01 | 0.862676 | 4.280014e-64 | 1.263789e-60 |
| MsG0180005268.01 | MsG0380017322.01 | 0.803816 | 2.910553e-49 | 1.476905e-46 |
| MsG0180005268.01 | MsG0380017476.01 | 0.826572 | 2.521064e-54 | 2.373199e-51 |
| MsG0180005268.01 | MsG0380017511.01 | 0.813860 | 2.066681e-51 | 1.365140e-48 |
| MsG0180005268.01 | MsG0380017512.01 | 0.863471 | 2.431277e-64 | 7.377901e-61 |
| MsG0180005268.01 | MsG0380017979.01 | 0.800885 | 1.168556e-48 | 5.503377e-46 |
| MsG0180005268.01 | MsG0380018022.01 | 0.815496 | 8.974531e-52 | 6.197630e-49 |
| MsG0180005268.01 | MsG0480018235.01 | 0.808729 | 2.684442e-50 | 1.546520e-47 |
| MsG0180005268.01 | MsG0480018292.01 | 0.842197 | 2.995348e-58 | 4.506888e-55 |
| MsG0180005268.01 | MsG0480018606.01 | 0.803595 | 3.233870e-49 | 1.631752e-46 |
| MsG0180005268.01 | MsG0480018847.01 | 0.800446 | 1.435917e-48 | 6.687334e-46 |
| MsG0180005268.01 | MsG0480018906.01 | 0.809731 | 1.636948e-50 | 9.686434e-48 |
| MsG0180005268.01 | MsG0480019380.01 | 0.806900 | 6.570550e-50 | 3.608877e-47 |
| MsG0180005268.01 | MsG0480019785.01 | 0.871677 | 5.693940e-67 | 2.316876e-63 |
| MsG0180005268.01 | MsG0480020487.01 | 0.813971 | 1.953786e-51 | 1.294457e-48 |
| MsG0180005268.01 | MsG0480020719.01 | 0.811727 | 6.058156e-51 | 3.778816e-48 |
| MsG0180005268.01 | MsG0480020720.01 | 0.818696 | 1.712953e-52 | 1.291323e-49 |
| MsG0180005268.01 | MsG0480020843.01 | 0.816320 | 5.878020e-52 | 4.151820e-49 |
| MsG0180005268.01 | MsG0480021041.01 | 0.843769 | 1.142609e-58 | 1.806315e-55 |
| MsG0180005268.01 | MsG0480021061.01 | 0.814922 | 1.203893e-51 | 8.183670e-49 |
| MsG0180005268.01 | MsG0480021190.01 | 0.836384 | 9.658704e-57 | 1.215250e-53 |
| MsG0180005268.01 | MsG0480021240.01 | 0.802358 | 5.825802e-49 | 2.848119e-46 |
| MsG0180005268.01 | MsG0480021418.01 | 0.804090 | 2.552150e-49 | 1.304204e-46 |
| MsG0180005268.01 | MsG0480021432.01 | 0.810938 | 8.986979e-51 | 5.490498e-48 |
| MsG0180005268.01 | MsG0480021490.01 | -0.811283 | 7.565018e-51 | 4.663504e-48 |
| MsG0180005268.01 | MsG0480021832.01 | 0.824449 | 8.022130e-54 | 7.107410e-51 |
| MsG0180005268.01 | MsG0480021994.01 | 0.819789 | 9.655699e-53 | 7.503867e-50 |
| MsG0180005268.01 | MsG0480022035.01 | 0.818357 | 2.044372e-52 | 1.526971e-49 |
| MsG0180005268.01 | MsG0480022246.01 | 0.842220 | 2.953628e-58 | 4.447539e-55 |
| MsG0180005268.01 | MsG0480022248.01 | 0.808183 | 3.509314e-50 | 1.993219e-47 |
| MsG0180005268.01 | MsG0480022292.01 | 0.865348 | 6.304779e-65 | 2.044466e-61 |
| MsG0180005268.01 | MsG0480022343.01 | 0.810390 | 1.180474e-50 | 7.106389e-48 |
| MsG0180005268.01 | MsG0480022493.01 | 0.871452 | 6.760156e-67 | 2.728721e-63 |
| MsG0180005268.01 | MsG0480022897.01 | 0.801285 | 9.675718e-49 | 4.603073e-46 |
| MsG0180005268.01 | MsG0480023055.01 | 0.803543 | 3.315144e-49 | 1.670527e-46 |
| MsG0180005268.01 | MsG0480023143.01 | 0.802612 | 5.166297e-49 | 2.541921e-46 |
| MsG0180005268.01 | MsG0480023377.01 | 0.814638 | 1.391248e-51 | 9.385934e-49 |
| MsG0180005268.01 | MsG0480023378.01 | 0.812911 | 3.339829e-51 | 2.150110e-48 |
| MsG0180005268.01 | MsG0480023396.01 | 0.834856 | 2.352371e-56 | 2.826787e-53 |
| MsG0180005268.01 | MsG0480023412.01 | 0.801565 | 8.480161e-49 | 4.062750e-46 |
| MsG0180005268.01 | MsG0480023415.01 | 0.806279 | 8.885096e-50 | 4.803090e-47 |
| MsG0180005268.01 | MsG0480023517.01 | 0.822761 | 1.992106e-53 | 1.682920e-50 |
| MsG0180005268.01 | MsG0480023554.01 | 0.842418 | 2.617589e-58 | 3.966779e-55 |
| MsG0180005268.01 | MsG0480023776.01 | 0.840227 | 9.873443e-58 | 1.397326e-54 |
| MsG0180005268.01 | MsG0480023867.01 | 0.823278 | 1.509887e-53 | 1.294177e-50 |
| MsG0180005268.01 | MsG0580024084.01 | 0.865942 | 4.093932e-65 | 1.355897e-61 |
| MsG0180005268.01 | MsG0580024536.01 | 0.820065 | 8.350316e-53 | 6.539739e-50 |
| MsG0180005268.01 | MsG0580025026.01 | 0.821582 | 3.740776e-53 | 3.055448e-50 |
| MsG0180005268.01 | MsG0580025042.01 | 0.823539 | 1.311958e-53 | 1.132817e-50 |
| MsG0180005268.01 | MsG0580025134.01 | 0.807898 | 4.037190e-50 | 2.275627e-47 |
| MsG0180005268.01 | MsG0580025400.01 | 0.835860 | 1.312255e-56 | 1.625089e-53 |
| MsG0180005268.01 | MsG0580025497.01 | 0.808900 | 2.467328e-50 | 1.427870e-47 |
| MsG0180005268.01 | MsG0580025769.01 | 0.802322 | 5.927237e-49 | 2.895057e-46 |
| MsG0180005268.01 | MsG0580025986.01 | 0.843647 | 1.231920e-58 | 1.940380e-55 |
| MsG0180005268.01 | MsG0580026225.01 | 0.847928 | 8.475195e-60 | 1.530170e-56 |
| MsG0180005268.01 | MsG0580026238.01 | 0.810450 | 1.145528e-50 | 6.907180e-48 |
| MsG0180005268.01 | MsG0580026439.01 | 0.812043 | 5.170090e-51 | 3.252077e-48 |
| MsG0180005268.01 | MsG0580027034.01 | 0.857603 | 1.458324e-62 | 3.619693e-59 |
| MsG0180005268.01 | MsG0580027124.01 | 0.801679 | 8.035751e-49 | 3.860852e-46 |
| MsG0180005268.01 | MsG0580027361.01 | 0.802537 | 5.351834e-49 | 2.628215e-46 |
| MsG0180005268.01 | MsG0580028291.01 | 0.817274 | 3.589767e-52 | 2.602426e-49 |
| MsG0180005268.01 | MsG0580028582.01 | 0.803570 | 3.273263e-49 | 1.650587e-46 |
| MsG0180005268.01 | MsG0580028597.01 | 0.816916 | 4.320089e-52 | 3.101470e-49 |
| MsG0180005268.01 | MsG0580028900.01 | 0.847383 | 1.197503e-59 | 2.124688e-56 |
| MsG0180005268.01 | MsG0580029065.01 | 0.811806 | 5.823964e-51 | 3.640148e-48 |
| MsG0180005268.01 | MsG0580029283.01 | 0.865617 | 5.185100e-65 | 1.697931e-61 |
| MsG0180005268.01 | MsG0580029300.01 | 0.822463 | 2.337118e-53 | 1.957583e-50 |
| MsG0180005268.01 | MsG0580029594.01 | 0.823417 | 1.400965e-53 | 1.205449e-50 |
| MsG0180005268.01 | MsG0580029628.01 | 0.802697 | 4.960105e-49 | 2.445877e-46 |
| MsG0180005268.01 | MsG0580029629.01 | 0.801595 | 8.360000e-49 | 4.008092e-46 |
| MsG0180005268.01 | MsG0580029758.01 | 0.801403 | 9.154065e-49 | 4.367720e-46 |
| MsG0180005268.01 | MsG0580029783.01 | 0.811488 | 6.828387e-51 | 4.232515e-48 |
| MsG0180005268.01 | MsG0580029794.01 | 0.853319 | 2.585697e-61 | 5.564667e-58 |
| MsG0180005268.01 | MsG0580029801.01 | 0.826598 | 2.484595e-54 | 2.340564e-51 |
| MsG0180005268.01 | MsG0580029919.01 | 0.801928 | 7.144298e-49 | 3.454388e-46 |
| MsG0180005268.01 | MsG0580030003.01 | 0.810918 | 9.077727e-51 | 5.542866e-48 |
| MsG0180005268.01 | MsG0580030204.01 | 0.839661 | 1.386514e-57 | 1.927749e-54 |
| MsG0180005268.01 | MsG0680031000.01 | 0.811790 | 5.869715e-51 | 3.667297e-48 |
| MsG0180005268.01 | MsG0680031051.01 | 0.811512 | 6.747128e-51 | 4.184834e-48 |
| MsG0180005268.01 | MsG0680031459.01 | 0.801648 | 8.155290e-49 | 3.915203e-46 |
| MsG0180005268.01 | MsG0680031536.01 | 0.823171 | 1.599242e-53 | 1.366644e-50 |
| MsG0180005268.01 | MsG0680031538.01 | 0.830001 | 3.754632e-55 | 3.906092e-52 |
| MsG0180005268.01 | MsG0680031699.01 | 0.803442 | 3.480010e-49 | 1.748936e-46 |
| MsG0180005268.01 | MsG0680031828.01 | 0.803658 | 3.138036e-49 | 1.585825e-46 |
| MsG0180005268.01 | MsG0680032075.01 | 0.839368 | 1.651815e-57 | 2.276333e-54 |
| MsG0180005268.01 | MsG0680033926.01 | 0.850082 | 2.136886e-60 | 4.137360e-57 |
| MsG0180005268.01 | MsG0680034476.01 | 0.865683 | 4.944204e-65 | 1.622869e-61 |
| MsG0180005268.01 | MsG0680034655.01 | 0.816211 | 6.215136e-52 | 4.376879e-49 |
| MsG0180005268.01 | MsG0680035306.01 | 0.813029 | 3.148115e-51 | 2.033077e-48 |
| MsG0180005268.01 | MsG0680035582.01 | 0.812984 | 3.218955e-51 | 2.076335e-48 |
| MsG0180005268.01 | MsG0680035854.01 | 0.884256 | 2.239916e-71 | 1.467689e-67 |
| MsG0180005268.01 | MsG0780035937.01 | 0.807272 | 5.482329e-50 | 3.040450e-47 |
| MsG0180005268.01 | MsG0780036117.01 | 0.808354 | 3.228271e-50 | 1.841862e-47 |
| MsG0180005268.01 | MsG0780036240.01 | 0.836200 | 1.075640e-56 | 1.346151e-53 |
| MsG0180005268.01 | MsG0780036247.01 | -0.814913 | 1.209384e-51 | 8.218946e-49 |
| MsG0180005268.01 | MsG0780039340.01 | 0.871755 | 5.367029e-67 | 2.189898e-63 |
| MsG0180005268.01 | MsG0780039828.01 | 0.821216 | 4.542162e-53 | 3.672790e-50 |
| MsG0180005268.01 | MsG0780039943.01 | 0.892281 | 1.834029e-74 | 1.664718e-70 |
| MsG0180005268.01 | MsG0780040070.01 | 0.813901 | 2.023811e-51 | 1.338358e-48 |
| MsG0180005268.01 | MsG0780040110.01 | 0.803022 | 4.250046e-49 | 2.112956e-46 |
| MsG0180005268.01 | MsG0780040125.01 | 0.834226 | 3.386778e-56 | 3.993459e-53 |
| MsG0180005268.01 | MsG0780040182.01 | 0.810232 | 1.277136e-50 | 7.656448e-48 |
| MsG0180005268.01 | MsG0780040208.01 | 0.822687 | 2.072786e-53 | 1.747307e-50 |
| MsG0180005268.01 | MsG0780040258.01 | 0.817370 | 3.416576e-52 | 2.483494e-49 |
| MsG0180005268.01 | MsG0780040375.01 | -0.834909 | 2.281254e-56 | 2.745758e-53 |
| MsG0180005268.01 | MsG0780040424.01 | 0.826661 | 2.400223e-54 | 2.265333e-51 |
| MsG0180005268.01 | MsG0780040519.01 | 0.813085 | 3.059296e-51 | 1.978641e-48 |
| MsG0180005268.01 | MsG0780040718.01 | 0.854601 | 1.104395e-61 | 2.479871e-58 |
| MsG0180005268.01 | MsG0780040734.01 | 0.804457 | 2.140585e-49 | 1.104228e-46 |
| MsG0180005268.01 | MsG0780040758.01 | 0.843870 | 1.073791e-58 | 1.703091e-55 |
| MsG0180005268.01 | MsG0780041006.01 | 0.847125 | 1.409657e-59 | 2.480795e-56 |
| MsG0180005268.01 | MsG0780041044.01 | 0.811699 | 6.144878e-51 | 3.829743e-48 |
| MsG0180005268.01 | MsG0780041192.01 | 0.813113 | 3.016778e-51 | 1.952554e-48 |
| MsG0180005268.01 | MsG0780041210.01 | 0.842028 | 3.321075e-58 | 4.970638e-55 |
| MsG0180005268.01 | MsG0780041223.01 | 0.801394 | 9.194007e-49 | 4.385707e-46 |
| MsG0180005268.01 | MsG0780041258.01 | 0.833759 | 4.434700e-56 | 5.156493e-53 |
| MsG0180005268.01 | MsG0780041390.01 | 0.809681 | 1.677956e-50 | 9.915902e-48 |
| MsG0180005268.01 | MsG0780041435.01 | 0.824540 | 7.637439e-54 | 6.784975e-51 |
| MsG0180005268.01 | MsG0780041507.01 | 0.808307 | 3.303068e-50 | 1.882139e-47 |
| MsG0180005268.01 | MsG0880042033.01 | 0.827492 | 1.518322e-54 | 1.468105e-51 |
| MsG0180005268.01 | MsG0880042107.01 | 0.804486 | 2.111282e-49 | 1.089885e-46 |
| MsG0180005268.01 | MsG0880042972.01 | 0.814948 | 1.187798e-51 | 8.080074e-49 |
| MsG0180005268.01 | MsG0880043082.01 | 0.809661 | 1.694773e-50 | 1.001008e-47 |
| MsG0180005268.01 | MsG0880043162.01 | 0.822021 | 2.959744e-53 | 2.447841e-50 |
| MsG0180005268.01 | MsG0880043163.01 | 0.833567 | 4.953311e-56 | 5.726284e-53 |
| MsG0180005268.01 | MsG0880043194.01 | 0.811603 | 6.446570e-51 | 4.007623e-48 |
| MsG0180005268.01 | MsG0880043351.01 | 0.817065 | 4.000136e-52 | 2.883564e-49 |
| MsG0180005268.01 | MsG0880044409.01 | 0.814205 | 1.734618e-51 | 1.156533e-48 |
| MsG0180005268.01 | MsG0880045106.01 | 0.812036 | 5.188811e-51 | 3.263252e-48 |
| MsG0180005268.01 | MsG0880045329.01 | 0.819315 | 1.239146e-52 | 9.501948e-50 |
| MsG0180005268.01 | MsG0880045498.01 | 0.804126 | 2.509157e-49 | 1.283396e-46 |
| MsG0180005268.01 | MsG0880045619.01 | 0.809827 | 1.560867e-50 | 9.259290e-48 |
| MsG0180005268.01 | MsG0880045656.01 | 0.824113 | 9.622548e-54 | 8.444452e-51 |
| MsG0180005268.01 | MsG0880045869.01 | 0.885032 | 1.153289e-71 | 7.791602e-68 |
| MsG0180005268.01 | MsG0880045894.01 | 0.800785 | 1.224431e-48 | 5.751472e-46 |
| MsG0180005268.01 | MsG0880046058.01 | 0.832506 | 9.094608e-56 | 1.018591e-52 |
| MsG0180005268.01 | MsG0880046068.01 | 0.842604 | 2.335866e-58 | 3.560211e-55 |
| MsG0180005268.01 | MsG0880046091.01 | 0.834307 | 3.232540e-56 | 3.821328e-53 |
| MsG0180005268.01 | MsG0880046244.01 | 0.811466 | 6.904969e-51 | 4.277351e-48 |
| MsG0180005268.01 | MsG0880046253.01 | 0.808147 | 3.572750e-50 | 2.027283e-47 |
| MsG0180005268.01 | MsG0880046342.01 | 0.801491 | 8.782858e-49 | 4.199984e-46 |
| MsG0180005268.01 | MsG0880046377.01 | 0.808468 | 3.052191e-50 | 1.746564e-47 |
| MsG0180005268.01 | MsG0880046963.01 | -0.812364 | 4.401202e-51 | 2.792837e-48 |
| MsG0180005268.01 | MsG0880047086.01 | 0.801334 | 9.455369e-49 | 4.503736e-46 |
| MsG0180005268.01 | MsG0880047116.01 | 0.806809 | 6.867203e-50 | 3.763085e-47 |
| MsG0180005268.01 | MsG0880047428.01 | 0.819071 | 1.407639e-52 | 1.072246e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005268.01.T01 | MTR_1g095910 | 94.944 | 178 | 9 | 0 | 1 | 178 | 142 | 319 | 6.59e-126 | 357 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005268.01.T01 | AT5G63220 | 64.972 | 177 | 61 | 1 | 4 | 179 | 147 | 323 | 4.47e-85 | 254 |
| MsG0180005268.01.T01 | AT5G63220 | 64.773 | 176 | 61 | 1 | 4 | 178 | 113 | 288 | 5.49e-85 | 252 |
| MsG0180005268.01.T01 | AT5G63220 | 64.773 | 176 | 61 | 1 | 4 | 178 | 147 | 322 | 1.49e-84 | 253 |
Find 31 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGGTGGTCTGCTGAATT+TGG | 0.163183 | 1:-89377245 | MsG0180005268.01.T01:intron |
| CGTGATAGGTATTTATCTTT+AGG | 0.203207 | 1:-89376055 | MsG0180005268.01.T01:intron |
| AACTGCATCAAGTCTGTCTT+TGG | 0.298043 | 1:+89375962 | None:intergenic |
| GCCAGCATAATGTGCAGTTC+TGG | 0.337296 | 1:+89377203 | None:intergenic |
| AGGAACCCCATGGGGATGTT+TGG | 0.375805 | 1:-89375305 | MsG0180005268.01.T01:CDS |
| CTTGGATGGACAAAGCTATC+TGG | 0.395298 | 1:-89378472 | None:intergenic |
| GAAGGTTCCCTCTCAATACT+TGG | 0.417291 | 1:+89375596 | None:intergenic |
| CAAATATTGCAGTGTTATCC+TGG | 0.421176 | 1:-89376695 | MsG0180005268.01.T01:intron |
| TTATCCTGGTGAAGATGATT+TGG | 0.438610 | 1:-89376681 | MsG0180005268.01.T01:CDS |
| AAGTTAGCTGACCTCATTGA+AGG | 0.458677 | 1:+89375574 | None:intergenic |
| AAGATGATTTGGCCATTGCT+CGG | 0.461655 | 1:-89376670 | MsG0180005268.01.T01:CDS |
| TTTATCTTTAGGTAATTTGA+AGG | 0.480180 | 1:-89376044 | MsG0180005268.01.T01:CDS |
| TCCAGAACTGCACATTATGC+TGG | 0.493532 | 1:-89377204 | MsG0180005268.01.T01:CDS |
| AGATGATTTGGCCATTGCTC+GGG | 0.506175 | 1:-89376669 | MsG0180005268.01.T01:CDS |
| AAAGAAGCAAACTGAATCTA+CGG | 0.518329 | 1:-89375996 | MsG0180005268.01.T01:CDS |
| GATGTTTGGAGATATATTCA+AGG | 0.542412 | 1:-89375291 | MsG0180005268.01.T01:CDS |
| ATTATGAAACATACCACCTC+AGG | 0.544326 | 1:+89377158 | None:intergenic |
| CCTTAAAACAGCCCGAGCAA+TGG | 0.579750 | 1:+89376658 | None:intergenic |
| ATATCTCCAAACATCCCCAT+GGG | 0.590014 | 1:+89375299 | None:intergenic |
| GAATTTGGAACAAGTAGTAG+TGG | 0.594161 | 1:-89377230 | MsG0180005268.01.T01:CDS |
| ACTATAAACCAAGTATTGAG+AGG | 0.595066 | 1:-89375604 | MsG0180005268.01.T01:CDS |
| TAGCTGACCTCATTGAAGGA+AGG | 0.611327 | 1:+89375578 | None:intergenic |
| TATATCTCCAAACATCCCCA+TGG | 0.619960 | 1:+89375298 | None:intergenic |
| ATGGCCAAATCATCTTCACC+AGG | 0.631573 | 1:+89376677 | None:intergenic |
| GAGGGAACCTTCCTTCAATG+AGG | 0.640670 | 1:-89375585 | MsG0180005268.01.T01:intron |
| CTATAAACCAAGTATTGAGA+GGG | 0.642760 | 1:-89375603 | MsG0180005268.01.T01:CDS |
| GTACAACGAAGGAACCCCAT+GGG | 0.645664 | 1:-89375314 | MsG0180005268.01.T01:CDS |
| GAAGGATGCAAACATACTAG+TGG | 0.647684 | 1:-89376026 | MsG0180005268.01.T01:CDS |
| CGTACAACGAAGGAACCCCA+TGG | 0.672187 | 1:-89375315 | MsG0180005268.01.T01:CDS |
| TACAACGAAGGAACCCCATG+GGG | 0.720700 | 1:-89375313 | MsG0180005268.01.T01:CDS |
| TATCTCCAAACATCCCCATG+GGG | 0.753433 | 1:+89375300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAATATAAAGTAAAA+AGG | + | Chr1:89378052-89378071 | None:intergenic | 10.0% |
| !! | ATTAAAACTAAATGTAAATT+TGG | + | Chr1:89375419-89375438 | None:intergenic | 10.0% |
| !!! | CTAATTACTAATAAATTTTA+TGG | - | Chr1:89375874-89375893 | MsG0180005268.01.T01:intron | 10.0% |
| !! | AAACAAATATAAGAAAGTTA+GGG | + | Chr1:89376822-89376841 | None:intergenic | 15.0% |
| !! | AAATACTGATAAATAATTGA+AGG | + | Chr1:89375630-89375649 | None:intergenic | 15.0% |
| !! | AATACTGATAAATAATTGAA+GGG | + | Chr1:89375629-89375648 | None:intergenic | 15.0% |
| !!! | TATTTGGAGTATATAATATT+TGG | - | Chr1:89375828-89375847 | MsG0180005268.01.T01:intron | 15.0% |
| !!! | TCTTATGATTATTTTTCTAT+TGG | - | Chr1:89378303-89378322 | MsG0180005268.01.T01:intron | 15.0% |
| !!! | TTTTATCTTCTATTTATCTA+AGG | - | Chr1:89375499-89375518 | MsG0180005268.01.T01:intron | 15.0% |
| !! | AAAGTAAGACAAAAATTGTT+TGG | + | Chr1:89376872-89376891 | None:intergenic | 20.0% |
| !! | AAATTTCATCCTAGTATAAA+TGG | + | Chr1:89377209-89377228 | None:intergenic | 20.0% |
| !! | AACAAATATAAGAAAGTTAG+GGG | + | Chr1:89376821-89376840 | None:intergenic | 20.0% |
| !! | ACAAATATACCATATATTTG+TGG | + | Chr1:89378246-89378265 | None:intergenic | 20.0% |
| !! | ATCATAAGCATAAATTATCT+TGG | + | Chr1:89377176-89377195 | None:intergenic | 20.0% |
| !! | ATGACAATATGTATAATATC+AGG | + | Chr1:89377143-89377162 | None:intergenic | 20.0% |
| !! | ATTATACATATTGTCATTCT+TGG | - | Chr1:89377146-89377165 | MsG0180005268.01.T01:intron | 20.0% |
| !! | CAAATAAATCCACAAATATA+TGG | - | Chr1:89378234-89378253 | MsG0180005268.01.T01:intron | 20.0% |
| !! | GAAACAAATATAAGAAAGTT+AGG | + | Chr1:89376823-89376842 | None:intergenic | 20.0% |
| !! | TCATAAGCATAAATTATCTT+GGG | + | Chr1:89377175-89377194 | None:intergenic | 20.0% |
| !! | TGACAATATGTATAATATCA+GGG | + | Chr1:89377142-89377161 | None:intergenic | 20.0% |
| !! | TTTATCTTTAGGTAATTTGA+AGG | - | Chr1:89377685-89377704 | MsG0180005268.01.T01:intron | 20.0% |
| !!! | AGTAAAAAGGTATTGAATTA+AGG | + | Chr1:89378039-89378058 | None:intergenic | 20.0% |
| !!! | TAATTTGTGTTCTAATCAAT+AGG | - | Chr1:89377846-89377865 | MsG0180005268.01.T01:intron | 20.0% |
| !!! | TGAACTCTGTATTTTTTTAA+GGG | + | Chr1:89376180-89376199 | None:intergenic | 20.0% |
| !!! | TTACTTTTTATGCTAAAACT+TGG | - | Chr1:89376885-89376904 | MsG0180005268.01.T01:intron | 20.0% |
| !!! | TTATATTTTTTCTTTGATGC+AGG | - | Chr1:89378059-89378078 | MsG0180005268.01.T01:intron | 20.0% |
| !!! | TTTATTTTCATCTTTGTTGT+TGG | - | Chr1:89378197-89378216 | MsG0180005268.01.T01:intron | 20.0% |
| ! | AATCTCATGGGATTAAATTA+CGG | + | Chr1:89375737-89375756 | None:intergenic | 25.0% |
| ! | ACAAATATAAGAAAGTTAGG+GGG | + | Chr1:89376820-89376839 | None:intergenic | 25.0% |
| ! | ATAATTGAAGGGTAAAAGAA+AGG | + | Chr1:89375618-89375637 | None:intergenic | 25.0% |
| ! | ATTTGGATAGAAATGTCAAA+AGG | + | Chr1:89375402-89375421 | None:intergenic | 25.0% |
| ! | CACCAAATTAAAAATCTCAT+GGG | + | Chr1:89375749-89375768 | None:intergenic | 25.0% |
| ! | CATTATTCATTCTGTATTTG+TGG | - | Chr1:89376976-89376995 | MsG0180005268.01.T01:CDS | 25.0% |
| ! | CCTAAATAACCATTTATACT+AGG | - | Chr1:89377197-89377216 | MsG0180005268.01.T01:CDS | 25.0% |
| ! | CCTAGTATAAATGGTTATTT+AGG | + | Chr1:89377200-89377219 | None:intergenic | 25.0% |
| ! | CGTCTAAAAAAAATCTATGA+AGG | - | Chr1:89375902-89375921 | MsG0180005268.01.T01:intron | 25.0% |
| ! | GTTTCATAATATTGCTTCTA+GGG | - | Chr1:89376584-89376603 | MsG0180005268.01.T01:intron | 25.0% |
| ! | TCACCAAATTAAAAATCTCA+TGG | + | Chr1:89375750-89375769 | None:intergenic | 25.0% |
| ! | TGTTTCATAATATTGCTTCT+AGG | - | Chr1:89376583-89376602 | MsG0180005268.01.T01:intron | 25.0% |
| ! | TTAAATAAGTCTCTTTCAAG+TGG | - | Chr1:89376368-89376387 | MsG0180005268.01.T01:intron | 25.0% |
| !! | GAGAACATAATTTTCACTTT+GGG | - | Chr1:89377113-89377132 | MsG0180005268.01.T01:intron | 25.0% |
| !! | TCTACACTATTGAACTTTTT+GGG | - | Chr1:89376785-89376804 | MsG0180005268.01.T01:intron | 25.0% |
| !! | TGAGAACATAATTTTCACTT+TGG | - | Chr1:89377112-89377131 | MsG0180005268.01.T01:intron | 25.0% |
| !! | TTCTACACTATTGAACTTTT+TGG | - | Chr1:89376784-89376803 | MsG0180005268.01.T01:intron | 25.0% |
| !! | TTTAAAATCCTTGTGTTCTT+TGG | - | Chr1:89377579-89377598 | MsG0180005268.01.T01:intron | 25.0% |
| !!! | ATCCCATGAGATTTTTAATT+TGG | - | Chr1:89375744-89375763 | MsG0180005268.01.T01:intron | 25.0% |
| !!! | CTGAACTCTGTATTTTTTTA+AGG | + | Chr1:89376181-89376200 | None:intergenic | 25.0% |
| !!! | GTTATTTTCTTTTTGTCCTA+TGG | - | Chr1:89375677-89375696 | MsG0180005268.01.T01:intron | 25.0% |
| AAAAAGTGATCAAGAGAGAA+AGG | - | Chr1:89375350-89375369 | MsG0180005268.01.T01:CDS | 30.0% | |
| AAAGAAGCAAACTGAATCTA+CGG | - | Chr1:89377733-89377752 | MsG0180005268.01.T01:intron | 30.0% | |
| AAATCTATGAAGGATTTCCT+CGG | - | Chr1:89375912-89375931 | MsG0180005268.01.T01:intron | 30.0% | |
| AAATTGAACTTCTACAAGCT+TGG | + | Chr1:89376269-89376288 | None:intergenic | 30.0% | |
| AATAACTTACATTGCATCAC+AGG | + | Chr1:89375663-89375682 | None:intergenic | 30.0% | |
| AGCTTGTAGAAGTTCAATTT+AGG | - | Chr1:89376269-89376288 | MsG0180005268.01.T01:intron | 30.0% | |
| CAACTTTACAAATTCTGTTG+AGG | - | Chr1:89376842-89376861 | MsG0180005268.01.T01:intron | 30.0% | |
| CGTGATAGGTATTTATCTTT+AGG | - | Chr1:89377674-89377693 | MsG0180005268.01.T01:intron | 30.0% | |
| CTATTCGTCAAACTAAATTC+TGG | - | Chr1:89376943-89376962 | MsG0180005268.01.T01:CDS | 30.0% | |
| GATGTTTGGAGATATATTCA+AGG | - | Chr1:89378438-89378457 | MsG0180005268.01.T01:intron | 30.0% | |
| GCTCTCAACATATTAAAAAG+TGG | + | Chr1:89378103-89378122 | None:intergenic | 30.0% | |
| GCTGTGTTATAGATATCAAA+AGG | + | Chr1:89376225-89376244 | None:intergenic | 30.0% | |
| TAGAAATGTCAAAAGGATTC+AGG | + | Chr1:89375395-89375414 | None:intergenic | 30.0% | |
| TCATTCGTTTACACAAACAA+AGG | + | Chr1:89376687-89376706 | None:intergenic | 30.0% | |
| ! | TATTTATCTAAGGTTACCTG+TGG | - | Chr1:89375509-89375528 | MsG0180005268.01.T01:intron | 30.0% |
| !! | AACTAAATTCTGGAGTTAAC+TGG | - | Chr1:89376953-89376972 | MsG0180005268.01.T01:CDS | 30.0% |
| !! | ACTATAAACCAAGTATTGAG+AGG | - | Chr1:89378125-89378144 | MsG0180005268.01.T01:intron | 30.0% |
| !! | ATGGCTTTATTTCTTAGAGT+GGG | - | Chr1:89377990-89378009 | MsG0180005268.01.T01:intron | 30.0% |
| !! | CTATAAACCAAGTATTGAGA+GGG | - | Chr1:89378126-89378145 | MsG0180005268.01.T01:intron | 30.0% |
| !! | GCTAAAAGTTACTTGCTTTT+AGG | - | Chr1:89375312-89375331 | MsG0180005268.01.T01:CDS | 30.0% |
| !! | TATGGCTTTATTTCTTAGAG+TGG | - | Chr1:89377989-89378008 | MsG0180005268.01.T01:intron | 30.0% |
| !! | TTAGGCTTTGTAACTTTTGT+TGG | - | Chr1:89376287-89376306 | MsG0180005268.01.T01:intron | 30.0% |
| !!! | ACAATTTGCTTTTTACATGC+AGG | - | Chr1:89376706-89376725 | MsG0180005268.01.T01:intron | 30.0% |
| !!! | ATTTTTTCTTTGATGCAGGA+TGG | - | Chr1:89378063-89378082 | MsG0180005268.01.T01:intron | 30.0% |
| !!! | CTCTGTATTTTTTTAAGGGT+CGG | + | Chr1:89376176-89376195 | None:intergenic | 30.0% |
| !!! | TATTTGTGGCATGGTTTTTT+TGG | - | Chr1:89376990-89377009 | MsG0180005268.01.T01:CDS | 30.0% |
| !!! | TTTCTGAATGCTTTTTCACT+CGG | - | Chr1:89377291-89377310 | MsG0180005268.01.T01:intron | 30.0% |
| !!! | TTTTCATCTTTGTTGTTGGT+AGG | - | Chr1:89378201-89378220 | MsG0180005268.01.T01:intron | 30.0% |
| AACCTTTGTTGACATATGCA+TGG | + | Chr1:89377627-89377646 | None:intergenic | 35.0% | |
| AAGCCAGAAATATTGCTAAG+AGG | + | Chr1:89376451-89376470 | None:intergenic | 35.0% | |
| AGATCTGCTTTCTCGTAATA+TGG | - | Chr1:89377459-89377478 | MsG0180005268.01.T01:intron | 35.0% | |
| ATACAACACTCAACAAACGA+GGG | + | Chr1:89376106-89376125 | None:intergenic | 35.0% | |
| ATTATGAAACATACCACCTC+AGG | + | Chr1:89376574-89376593 | None:intergenic | 35.0% | |
| CAAATATTGCAGTGTTATCC+TGG | - | Chr1:89377034-89377053 | MsG0180005268.01.T01:intron | 35.0% | |
| CCAAGAGTTTCATCATCATA+AGG | + | Chr1:89375584-89375603 | None:intergenic | 35.0% | |
| GTACCTCTTAGCAATATTTC+TGG | - | Chr1:89376445-89376464 | MsG0180005268.01.T01:intron | 35.0% | |
| TCTGGTAACAGATGAGATTA+AGG | + | Chr1:89377915-89377934 | None:intergenic | 35.0% | |
| TGAATTCAAGAGAAGCAACA+AGG | + | Chr1:89376616-89376635 | None:intergenic | 35.0% | |
| TTATCCTGGTGAAGATGATT+TGG | - | Chr1:89377048-89377067 | MsG0180005268.01.T01:intron | 35.0% | |
| TTCATTCTGTATTTGTGGCA+TGG | - | Chr1:89376981-89377000 | MsG0180005268.01.T01:CDS | 35.0% | |
| TTCCATGCATATGTCAACAA+AGG | - | Chr1:89377622-89377641 | MsG0180005268.01.T01:intron | 35.0% | |
| ! | AAGCTATCTGGTACATTTTC+TGG | - | Chr1:89375269-89375288 | MsG0180005268.01.T01:CDS | 35.0% |
| ! | AGAGCTTGCTTTATTGTTTG+TGG | - | Chr1:89375535-89375554 | MsG0180005268.01.T01:intron | 35.0% |
| ! | AGCTATCTGGTACATTTTCT+GGG | - | Chr1:89375270-89375289 | MsG0180005268.01.T01:CDS | 35.0% |
| ! | AGGAATTTTCCCTTTCACTA+AGG | + | Chr1:89375564-89375583 | None:intergenic | 35.0% |
| ! | CCTTATGATGATGAAACTCT+TGG | - | Chr1:89375581-89375600 | MsG0180005268.01.T01:intron | 35.0% |
| ! | GAATTTGGAACAAGTAGTAG+TGG | - | Chr1:89376499-89376518 | MsG0180005268.01.T01:intron | 35.0% |
| ! | TAAGTCTCTTTCAAGTGGTA+TGG | - | Chr1:89376373-89376392 | MsG0180005268.01.T01:intron | 35.0% |
| ! | TTTTAGCAACCTATGCTTTC+AGG | + | Chr1:89375299-89375318 | None:intergenic | 35.0% |
| !! | AAGTGTTCTAAAGTGACCAT+AGG | + | Chr1:89375696-89375715 | None:intergenic | 35.0% |
| !! | ACTATTGAACTTTTTGGGCA+AGG | - | Chr1:89376790-89376809 | MsG0180005268.01.T01:intron | 35.0% |
| !! | CATATTTTCTGAAAGTCCTG+AGG | - | Chr1:89376555-89376574 | MsG0180005268.01.T01:intron | 35.0% |
| !! | GATAGCAGCTTTTAAGAATG+AGG | + | Chr1:89376028-89376047 | None:intergenic | 35.0% |
| AACTGCATCAAGTCTGTCTT+TGG | + | Chr1:89377770-89377789 | None:intergenic | 40.0% | |
| AAGTGCAAAAACACGTGTTG+AGG | - | Chr1:89375996-89376015 | MsG0180005268.01.T01:CDS | 40.0% | |
| AAGTTAGCTGACCTCATTGA+AGG | + | Chr1:89378158-89378177 | None:intergenic | 40.0% | |
| AATGCTTCCTGTTCAGATCA+TGG | - | Chr1:89377372-89377391 | MsG0180005268.01.T01:intron | 40.0% | |
| AGTGCAAAAACACGTGTTGA+GGG | - | Chr1:89375997-89376016 | MsG0180005268.01.T01:CDS | 40.0% | |
| ATATCTCCAAACATCCCCAT+GGG | + | Chr1:89378433-89378452 | None:intergenic | 40.0% | |
| CATACAACACTCAACAAACG+AGG | + | Chr1:89376107-89376126 | None:intergenic | 40.0% | |
| CCTTCACTAATTCCGTTTAG+CGG | - | Chr1:89377505-89377524 | MsG0180005268.01.T01:intron | 40.0% | |
| CGCTAAACGGAATTAGTGAA+GGG | + | Chr1:89377507-89377526 | None:intergenic | 40.0% | |
| CTTCACTAATTCCGTTTAGC+GGG | - | Chr1:89377506-89377525 | MsG0180005268.01.T01:intron | 40.0% | |
| GAAGGATGCAAACATACTAG+TGG | - | Chr1:89377703-89377722 | MsG0180005268.01.T01:intron | 40.0% | |
| GACATCAACCAAAGAACACA+AGG | + | Chr1:89377590-89377609 | None:intergenic | 40.0% | |
| GCATACCACTCACTTGTAAA+AGG | + | Chr1:89376401-89376420 | None:intergenic | 40.0% | |
| GTGATCAAGAGAGAAAGGAA+AGG | - | Chr1:89375355-89375374 | MsG0180005268.01.T01:intron | 40.0% | |
| TATATCTCCAAACATCCCCA+TGG | + | Chr1:89378434-89378453 | None:intergenic | 40.0% | |
| TGAAGGGAAGTTCTTGTATC+TGG | + | Chr1:89377933-89377952 | None:intergenic | 40.0% | |
| TTGCATTCCATGATCTGAAC+AGG | + | Chr1:89377382-89377401 | None:intergenic | 40.0% | |
| TTGCTCATTTCTTGCGTGAT+AGG | - | Chr1:89377660-89377679 | MsG0180005268.01.T01:intron | 40.0% | |
| TTGTGGAGACCTTAGTGAAA+GGG | - | Chr1:89375552-89375571 | MsG0180005268.01.T01:intron | 40.0% | |
| TTTGTGGAGACCTTAGTGAA+AGG | - | Chr1:89375551-89375570 | MsG0180005268.01.T01:intron | 40.0% | |
| ! | AAGATGATTTGGCCATTGCT+CGG | - | Chr1:89377059-89377078 | MsG0180005268.01.T01:intron | 40.0% |
| ! | AATTCCGTTTAGCGGGTATA+AGG | - | Chr1:89377513-89377532 | MsG0180005268.01.T01:intron | 40.0% |
| ! | AGAGAAAGGAAAGGCACAAA+TGG | - | Chr1:89375364-89375383 | MsG0180005268.01.T01:intron | 40.0% |
| ! | ATTCCGTTTAGCGGGTATAA+GGG | - | Chr1:89377514-89377533 | MsG0180005268.01.T01:intron | 40.0% |
| ! | CTCGTTTGTTGAGTGTTGTA+TGG | - | Chr1:89376105-89376124 | MsG0180005268.01.T01:intron | 40.0% |
| ! | GAGATTGCGCAGAAGTTTTA+TGG | - | Chr1:89378391-89378410 | MsG0180005268.01.T01:intron | 40.0% |
| ! | GCACTCATCATCTGTTTTCT+GGG | - | Chr1:89377536-89377555 | MsG0180005268.01.T01:intron | 40.0% |
| ! | GTGACGTATCATTTTGTGAG+AGG | - | Chr1:89376740-89376759 | MsG0180005268.01.T01:intron | 40.0% |
| !! | AGTTTTATGGCGTACAACGA+AGG | - | Chr1:89378404-89378423 | MsG0180005268.01.T01:intron | 40.0% |
| !! | ATTTTCTGAAAGTCCTGAGG+TGG | - | Chr1:89376558-89376577 | MsG0180005268.01.T01:intron | 40.0% |
| !!! | GCTTTGCTGCTATTTTATCC+AGG | - | Chr1:89376467-89376486 | MsG0180005268.01.T01:intron | 40.0% |
| !!! | TGTGGCATGGTTTTTTTGGA+AGG | - | Chr1:89376994-89377013 | MsG0180005268.01.T01:CDS | 40.0% |
| !!! | TTGCTGCTATTTTATCCAGG+TGG | - | Chr1:89376470-89376489 | MsG0180005268.01.T01:intron | 40.0% |
| ATGGCCAAATCATCTTCACC+AGG | + | Chr1:89377055-89377074 | None:intergenic | 45.0% | |
| CAAGAACTTCCCTTCACTTC+TGG | - | Chr1:89377937-89377956 | MsG0180005268.01.T01:intron | 45.0% | |
| CACTTCACACCAGAAGTGAA+GGG | + | Chr1:89377949-89377968 | None:intergenic | 45.0% | |
| CAGCAGCTTTCAGAAAACCT+TGG | - | Chr1:89375973-89375992 | MsG0180005268.01.T01:CDS | 45.0% | |
| CCGCTAAACGGAATTAGTGA+AGG | + | Chr1:89377508-89377527 | None:intergenic | 45.0% | |
| GAAGGTTCCCTCTCAATACT+TGG | + | Chr1:89378136-89378155 | None:intergenic | 45.0% | |
| GCATGTCATCAACATCCCAA+AGG | + | Chr1:89375954-89375973 | None:intergenic | 45.0% | |
| TAGCTGACCTCATTGAAGGA+AGG | + | Chr1:89378154-89378173 | None:intergenic | 45.0% | |
| TATCTCCAAACATCCCCATG+GGG | + | Chr1:89378432-89378451 | None:intergenic | 45.0% | |
| TCCAGAACTGCACATTATGC+TGG | - | Chr1:89376525-89376544 | MsG0180005268.01.T01:intron | 45.0% | |
| TCCATTGCCACAACACCTTT+GGG | - | Chr1:89375936-89375955 | MsG0180005268.01.T01:intron | 45.0% | |
| TTCCATTGCCACAACACCTT+TGG | - | Chr1:89375935-89375954 | MsG0180005268.01.T01:intron | 45.0% | |
| ! | AGATGATTTGGCCATTGCTC+GGG | - | Chr1:89377060-89377079 | MsG0180005268.01.T01:intron | 45.0% |
| ! | GAAAGGAAAGGCACAAATGG+AGG | - | Chr1:89375367-89375386 | MsG0180005268.01.T01:intron | 45.0% |
| ! | GGCACTCATCATCTGTTTTC+TGG | - | Chr1:89377535-89377554 | MsG0180005268.01.T01:intron | 45.0% |
| ! | TGGAGCCTTTTACAAGTGAG+TGG | - | Chr1:89376393-89376412 | MsG0180005268.01.T01:intron | 45.0% |
| !! | CACGTGTTTTTGCACTTCCA+AGG | + | Chr1:89375993-89376012 | None:intergenic | 45.0% |
| !! | TCAACATCCCAAAGGTGTTG+TGG | + | Chr1:89375946-89375965 | None:intergenic | 45.0% |
| !!! | ATAATTTTTATAAAATCATA+AGG | - | Chr1:89376137-89376156 | MsG0180005268.01.T01:intron | 5.0% |
| !!! | TTAATTATTTTAGAAATATA+TGG | - | Chr1:89377971-89377990 | MsG0180005268.01.T01:intron | 5.0% |
| !!! | TTTTTTTTTATAATCTTATT+TGG | - | Chr1:89375812-89375831 | MsG0180005268.01.T01:intron | 5.0% |
| CCTTAAAACAGCCCGAGCAA+TGG | + | Chr1:89377074-89377093 | None:intergenic | 50.0% | |
| GAGGGAACCTTCCTTCAATG+AGG | - | Chr1:89378144-89378163 | MsG0180005268.01.T01:intron | 50.0% | |
| GCACTTCACACCAGAAGTGA+AGG | + | Chr1:89377950-89377969 | None:intergenic | 50.0% | |
| GCCAGCATAATGTGCAGTTC+TGG | + | Chr1:89376529-89376548 | None:intergenic | 50.0% | |
| GTACAACGAAGGAACCCCAT+GGG | - | Chr1:89378415-89378434 | MsG0180005268.01.T01:intron | 50.0% | |
| GTGCCCTTATACCCGCTAAA+CGG | + | Chr1:89377520-89377539 | None:intergenic | 50.0% | |
| TAAAGCAAGCTCTGCTCCAC+AGG | + | Chr1:89375528-89375547 | None:intergenic | 50.0% | |
| TACAACGAAGGAACCCCATG+GGG | - | Chr1:89378416-89378435 | MsG0180005268.01.T01:intron | 50.0% | |
| TCCAAATTCAGCAGACCACC+TGG | + | Chr1:89376488-89376507 | None:intergenic | 50.0% | |
| TCCAGGTGGTCTGCTGAATT+TGG | - | Chr1:89376484-89376503 | MsG0180005268.01.T01:intron | 50.0% | |
| ! | TCTGGGACACCTGAAAGCAT+AGG | - | Chr1:89375287-89375306 | MsG0180005268.01.T01:CDS | 50.0% |
| !! | CCATTGCTCGGGCTGTTTTA+AGG | - | Chr1:89377071-89377090 | MsG0180005268.01.T01:intron | 50.0% |
| !! | TCCCAAAGGTGTTGTGGCAA+TGG | + | Chr1:89375940-89375959 | None:intergenic | 50.0% |
| AGGAACCCCATGGGGATGTT+TGG | - | Chr1:89378424-89378443 | MsG0180005268.01.T01:intron | 55.0% | |
| CGTACAACGAAGGAACCCCA+TGG | - | Chr1:89378414-89378433 | MsG0180005268.01.T01:intron | 55.0% | |
| GTGTTGTGGCAATGGAACCG+AGG | + | Chr1:89375932-89375951 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 89375262 | 89378489 | 89375262 | ID=MsG0180005268.01;Name=MsG0180005268.01 |
| Chr1 | mRNA | 89375262 | 89378489 | 89375262 | ID=MsG0180005268.01.T01;Parent=MsG0180005268.01;Name=MsG0180005268.01.T01;_AED=0.47;_eAED=0.52;_QI=0|0.83|0.71|1|1|1|7|0|186 |
| Chr1 | exon | 89378473 | 89378489 | 89378473 | ID=MsG0180005268.01.T01:exon:47737;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89377172 | 89377262 | 89377172 | ID=MsG0180005268.01.T01:exon:47736;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89376940 | 89377023 | 89376940 | ID=MsG0180005268.01.T01:exon:47735;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89376659 | 89376705 | 89376659 | ID=MsG0180005268.01.T01:exon:47734;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89375941 | 89376069 | 89375941 | ID=MsG0180005268.01.T01:exon:47733;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89375586 | 89375670 | 89375586 | ID=MsG0180005268.01.T01:exon:47732;Parent=MsG0180005268.01.T01 |
| Chr1 | exon | 89375262 | 89375369 | 89375262 | ID=MsG0180005268.01.T01:exon:47731;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89378473 | 89378489 | 89378473 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89377172 | 89377262 | 89377172 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89376940 | 89377023 | 89376940 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89376659 | 89376705 | 89376659 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89375941 | 89376069 | 89375941 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89375586 | 89375670 | 89375586 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Chr1 | CDS | 89375262 | 89375369 | 89375262 | ID=MsG0180005268.01.T01:cds;Parent=MsG0180005268.01.T01 |
| Gene Sequence |
| Protein sequence |
