Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046377.01.T01 | XP_039689228.1 | 95.977 | 348 | 14 | 0 | 1 | 348 | 1 | 348 | 0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046377.01.T01 | P34909 | 44.444 | 54 | 27 | 1 | 273 | 323 | 33 | 86 | 7.09E-11 | 67 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046377.01.T01 | A0A396IDB7 | 95.977 | 348 | 14 | 0 | 1 | 348 | 1 | 348 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0880046377.01 | 0.827169 | 1.814590e-54 | 1.738144e-51 |
| MsG0080048137.01 | MsG0880046377.01 | 0.810977 | 8.815194e-51 | 5.391235e-48 |
| MsG0080048197.01 | MsG0880046377.01 | 0.814727 | 1.329801e-51 | 8.992739e-49 |
| MsG0080048982.01 | MsG0880046377.01 | 0.812999 | 3.196110e-51 | 2.062458e-48 |
| MsG0180000271.01 | MsG0880046377.01 | 0.819545 | 1.097778e-52 | 8.473170e-50 |
| MsG0180000284.01 | MsG0880046377.01 | 0.805435 | 1.336905e-49 | 7.072345e-47 |
| MsG0180000790.01 | MsG0880046377.01 | 0.800755 | 1.242181e-48 | 5.830411e-46 |
| MsG0180000982.01 | MsG0880046377.01 | 0.805621 | 1.222129e-49 | 6.496117e-47 |
| MsG0180001151.01 | MsG0880046377.01 | 0.803694 | 3.084299e-49 | 1.560174e-46 |
| MsG0180002140.01 | MsG0880046377.01 | 0.846334 | 2.318623e-59 | 3.977200e-56 |
| MsG0180002283.01 | MsG0880046377.01 | 0.806737 | 7.112585e-50 | 3.890228e-47 |
| MsG0180002491.01 | MsG0880046377.01 | 0.810024 | 1.415419e-50 | 8.440459e-48 |
| MsG0880045479.01 | MsG0880046377.01 | 0.827341 | 1.650794e-54 | 1.589383e-51 |
| MsG0880046058.01 | MsG0880046377.01 | 0.828855 | 7.128853e-55 | 7.171381e-52 |
| MsG0880046377.01 | MsG0880046395.01 | 0.802296 | 6.001656e-49 | 2.929410e-46 |
| MsG0880046377.01 | MsG0880046536.01 | 0.802495 | 5.461073e-49 | 2.678911e-46 |
| MsG0880046377.01 | MsG0880047074.01 | 0.833342 | 5.635196e-56 | 6.471786e-53 |
| MsG0880046377.01 | MsG0880047116.01 | 0.810555 | 1.087359e-50 | 6.574899e-48 |
| MsG0180003088.01 | MsG0880046377.01 | 0.839751 | 1.313480e-57 | 1.831292e-54 |
| MsG0180003124.01 | MsG0880046377.01 | 0.806949 | 6.414910e-50 | 3.527895e-47 |
| MsG0180003252.01 | MsG0880046377.01 | 0.802046 | 6.756972e-49 | 3.276935e-46 |
| MsG0180003379.01 | MsG0880046377.01 | 0.850878 | 1.277040e-60 | 2.537809e-57 |
| MsG0180004016.01 | MsG0880046377.01 | 0.820933 | 5.278089e-53 | 4.234327e-50 |
| MsG0180004599.01 | MsG0880046377.01 | 0.827749 | 1.317193e-54 | 1.283144e-51 |
| MsG0180004684.01 | MsG0880046377.01 | 0.818031 | 2.423661e-52 | 1.793866e-49 |
| MsG0180005106.01 | MsG0880046377.01 | 0.867119 | 1.731030e-65 | 5.974613e-62 |
| MsG0180005160.01 | MsG0880046377.01 | 0.810194 | 1.301319e-50 | 7.793590e-48 |
| MsG0180005268.01 | MsG0880046377.01 | 0.808468 | 3.052191e-50 | 1.746564e-47 |
| MsG0180005676.01 | MsG0880046377.01 | -0.803733 | 3.028189e-49 | 1.533330e-46 |
| MsG0180005787.01 | MsG0880046377.01 | 0.858639 | 7.176578e-63 | 1.843916e-59 |
| MsG0180005990.01 | MsG0880046377.01 | 0.804474 | 2.123569e-49 | 1.095893e-46 |
| MsG0180006046.01 | MsG0880046377.01 | 0.812785 | 3.559525e-51 | 2.283853e-48 |
| MsG0180006050.01 | MsG0880046377.01 | 0.823831 | 1.120579e-53 | 9.757016e-51 |
| MsG0180006138.01 | MsG0880046377.01 | 0.809105 | 2.229829e-50 | 1.297660e-47 |
| MsG0180006220.01 | MsG0880046377.01 | 0.841150 | 5.657426e-58 | 8.238208e-55 |
| MsG0280006411.01 | MsG0880046377.01 | 0.823847 | 1.111099e-53 | 9.678573e-51 |
| MsG0780040424.01 | MsG0880046377.01 | 0.837048 | 6.540742e-57 | 8.395469e-54 |
| MsG0780040686.01 | MsG0880046377.01 | 0.825769 | 3.913056e-54 | 3.600591e-51 |
| MsG0780041345.01 | MsG0880046377.01 | 0.812051 | 5.149955e-51 | 3.240206e-48 |
| MsG0880042134.01 | MsG0880046377.01 | 0.835495 | 1.622908e-56 | 1.987995e-53 |
| MsG0880042436.01 | MsG0880046377.01 | 0.803699 | 3.077808e-49 | 1.557060e-46 |
| MsG0880043082.01 | MsG0880046377.01 | 0.820992 | 5.116774e-53 | 4.111896e-50 |
| MsG0880043498.01 | MsG0880046377.01 | 0.845096 | 5.025722e-59 | 8.283991e-56 |
| MsG0880043867.01 | MsG0880046377.01 | 0.841200 | 5.488011e-58 | 8.004027e-55 |
| MsG0280011287.01 | MsG0880046377.01 | 0.854080 | 1.562204e-61 | 3.448651e-58 |
| MsG0280011307.01 | MsG0880046377.01 | 0.842999 | 1.834751e-58 | 2.830675e-55 |
| MsG0380011531.01 | MsG0880046377.01 | 0.810818 | 9.541014e-51 | 5.809896e-48 |
| MsG0380011537.01 | MsG0880046377.01 | 0.807618 | 4.629954e-50 | 2.590797e-47 |
| MsG0380011747.01 | MsG0880046377.01 | 0.800105 | 1.684671e-48 | 7.778189e-46 |
| MsG0380011895.01 | MsG0880046377.01 | 0.816665 | 4.919284e-52 | 3.507496e-49 |
| MsG0380013467.01 | MsG0880046377.01 | 0.808452 | 3.075892e-50 | 1.759448e-47 |
| MsG0380013853.01 | MsG0880046377.01 | 0.805020 | 1.632606e-49 | 8.545101e-47 |
| MsG0680031000.01 | MsG0880046377.01 | 0.808490 | 3.019640e-50 | 1.728905e-47 |
| MsG0680031334.01 | MsG0880046377.01 | 0.834934 | 2.248938e-56 | 2.708800e-53 |
| MsG0680031536.01 | MsG0880046377.01 | 0.822668 | 2.093896e-53 | 1.764164e-50 |
| MsG0680031828.01 | MsG0880046377.01 | 0.834870 | 2.333493e-56 | 2.805291e-53 |
| MsG0680032510.01 | MsG0880046377.01 | -0.817965 | 2.508387e-52 | 1.853236e-49 |
| MsG0680034190.01 | MsG0880046377.01 | 0.800056 | 1.723859e-48 | 7.949248e-46 |
| MsG0680034219.01 | MsG0880046377.01 | 0.825496 | 4.542612e-54 | 4.147207e-51 |
| MsG0680035330.01 | MsG0880046377.01 | -0.820550 | 6.463766e-53 | 5.130361e-50 |
| MsG0680035598.01 | MsG0880046377.01 | 0.803222 | 3.863669e-49 | 1.930833e-46 |
| MsG0480018473.01 | MsG0880046377.01 | 0.852808 | 3.619173e-61 | 7.655872e-58 |
| MsG0480018847.01 | MsG0880046377.01 | 0.872238 | 3.707266e-67 | 1.539924e-63 |
| MsG0480018906.01 | MsG0880046377.01 | 0.813187 | 2.906157e-51 | 1.884788e-48 |
| MsG0480018995.01 | MsG0880046377.01 | 0.800552 | 1.365966e-48 | 6.378741e-46 |
| MsG0480019562.01 | MsG0880046377.01 | 0.819972 | 8.769421e-53 | 6.850041e-50 |
| MsG0480021041.01 | MsG0880046377.01 | 0.800409 | 1.460894e-48 | 6.797513e-46 |
| MsG0480021246.01 | MsG0880046377.01 | 0.818053 | 2.395903e-52 | 1.774425e-49 |
| MsG0480021776.01 | MsG0880046377.01 | -0.810833 | 9.469433e-51 | 5.768711e-48 |
| MsG0480022245.01 | MsG0880046377.01 | 0.822806 | 1.945465e-53 | 1.645457e-50 |
| MsG0480022246.01 | MsG0880046377.01 | 0.837418 | 5.260742e-57 | 6.829160e-54 |
| MsG0480022248.01 | MsG0880046377.01 | 0.834798 | 2.433538e-56 | 2.918941e-53 |
| MsG0480022343.01 | MsG0880046377.01 | 0.833733 | 4.500968e-56 | 5.229263e-53 |
| MsG0480023136.01 | MsG0880046377.01 | -0.814056 | 1.871070e-51 | 1.242505e-48 |
| MsG0480023162.01 | MsG0880046377.01 | 0.811852 | 5.689625e-51 | 3.560615e-48 |
| MsG0480023652.01 | MsG0880046377.01 | 0.836664 | 8.195948e-57 | 1.039810e-53 |
| MsG0480023994.01 | MsG0880046377.01 | 0.819397 | 1.186882e-52 | 9.122609e-50 |
| MsG0580024191.01 | MsG0880046377.01 | 0.807539 | 4.810092e-50 | 2.686181e-47 |
| MsG0580025134.01 | MsG0880046377.01 | 0.805038 | 1.619174e-49 | 8.478558e-47 |
| MsG0580025520.01 | MsG0880046377.01 | 0.807318 | 5.360697e-50 | 2.976592e-47 |
| MsG0380015157.01 | MsG0880046377.01 | 0.803192 | 3.919921e-49 | 1.957473e-46 |
| MsG0380015400.01 | MsG0880046377.01 | 0.817090 | 3.949107e-52 | 2.848624e-49 |
| MsG0380016117.01 | MsG0880046377.01 | 0.852534 | 4.333790e-61 | 9.082957e-58 |
| MsG0380016182.01 | MsG0880046377.01 | 0.809226 | 2.100690e-50 | 1.226481e-47 |
| MsG0380017022.01 | MsG0880046377.01 | 0.848980 | 4.337261e-60 | 8.101278e-57 |
| MsG0380017023.01 | MsG0880046377.01 | 0.866087 | 3.682955e-65 | 1.226060e-61 |
| MsG0380017085.01 | MsG0880046377.01 | 0.844960 | 5.469204e-59 | 8.976293e-56 |
| MsG0380017126.01 | MsG0880046377.01 | 0.860749 | 1.662465e-63 | 4.593388e-60 |
| MsG0380017279.01 | MsG0880046377.01 | 0.833873 | 4.151403e-56 | 4.844088e-53 |
| MsG0380017512.01 | MsG0880046377.01 | 0.855842 | 4.808288e-62 | 1.125142e-58 |
| MsG0380017791.01 | MsG0880046377.01 | 0.807915 | 4.001978e-50 | 2.256825e-47 |
| MsG0380017878.01 | MsG0880046377.01 | -0.805468 | 1.315887e-49 | 6.967121e-47 |
| MsG0480018213.01 | MsG0880046377.01 | 0.829814 | 4.170946e-55 | 4.316661e-52 |
| MsG0480018214.01 | MsG0880046377.01 | 0.821516 | 3.874161e-53 | 3.158555e-50 |
| MsG0480018332.01 | MsG0880046377.01 | 0.808941 | 2.418516e-50 | 1.401183e-47 |
| MsG0580026301.01 | MsG0880046377.01 | 0.808718 | 2.698283e-50 | 1.554044e-47 |
| MsG0580027034.01 | MsG0880046377.01 | 0.824087 | 9.757221e-54 | 8.556486e-51 |
| MsG0580028900.01 | MsG0880046377.01 | 0.800199 | 1.612251e-48 | 7.461426e-46 |
| MsG0580029514.01 | MsG0880046377.01 | -0.806411 | 8.334310e-50 | 4.520444e-47 |
| MsG0580029717.01 | MsG0880046377.01 | 0.811265 | 7.632522e-51 | 4.703014e-48 |
| MsG0680030415.01 | MsG0880046377.01 | 0.826111 | 3.244481e-54 | 3.014535e-51 |
| MsG0680030555.01 | MsG0880046377.01 | 0.805926 | 1.054484e-49 | 5.649212e-47 |
| MsG0680030636.01 | MsG0880046377.01 | 0.810031 | 1.411006e-50 | 8.415492e-48 |
| MsG0280006501.01 | MsG0880046377.01 | 0.855928 | 4.536997e-62 | 1.064716e-58 |
| MsG0280006682.01 | MsG0880046377.01 | 0.803661 | 3.133883e-49 | 1.583851e-46 |
| MsG0280007714.01 | MsG0880046377.01 | 0.824397 | 8.252588e-54 | 7.300819e-51 |
| MsG0280007775.01 | MsG0880046377.01 | 0.808261 | 3.377601e-50 | 1.922383e-47 |
| MsG0280007847.01 | MsG0880046377.01 | 0.813712 | 2.227746e-51 | 1.465734e-48 |
| MsG0280008417.01 | MsG0880046377.01 | 0.805418 | 1.347872e-49 | 7.127273e-47 |
| MsG0280009054.01 | MsG0880046377.01 | 0.808990 | 2.360297e-50 | 1.369274e-47 |
| MsG0280010205.01 | MsG0880046377.01 | 0.801127 | 1.042712e-48 | 4.940813e-46 |
| MsG0680035765.01 | MsG0880046377.01 | 0.837133 | 6.219974e-57 | 8.004190e-54 |
| MsG0780035957.01 | MsG0880046377.01 | 0.810416 | 1.165275e-50 | 7.019842e-48 |
| MsG0780037082.01 | MsG0880046377.01 | 0.819291 | 1.254365e-52 | 9.612660e-50 |
| MsG0780038911.01 | MsG0880046377.01 | 0.853440 | 2.385778e-61 | 5.155721e-58 |
| MsG0780039143.01 | MsG0880046377.01 | 0.806750 | 7.066833e-50 | 3.866485e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046377.01.T01 | MTR_4g107090 | 94.737 | 247 | 13 | 0 | 1 | 247 | 1 | 247 | 1.36e-124 | 358 |
| MsG0880046377.01.T01 | MTR_6g008950 | 43.910 | 312 | 122 | 12 | 22 | 319 | 14 | 286 | 3.90e-57 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046377.01.T01 | AT5G62910 | 44.134 | 358 | 153 | 10 | 1 | 345 | 1 | 324 | 1.20e-68 | 218 |
| MsG0880046377.01.T01 | AT5G62910 | 44.134 | 358 | 153 | 10 | 1 | 345 | 1 | 324 | 1.20e-68 | 218 |
| MsG0880046377.01.T01 | AT3G48070 | 46.328 | 354 | 149 | 11 | 1 | 348 | 1 | 319 | 5.07e-65 | 209 |
| MsG0880046377.01.T01 | AT3G48070 | 45.739 | 352 | 152 | 10 | 1 | 347 | 1 | 318 | 6.64e-64 | 207 |
| MsG0880046377.01.T01 | AT3G48070 | 47.656 | 256 | 101 | 8 | 96 | 347 | 43 | 269 | 1.25e-43 | 152 |
| MsG0880046377.01.T01 | AT1G74870 | 30.492 | 305 | 138 | 7 | 22 | 319 | 21 | 258 | 7.90e-27 | 107 |
| MsG0880046377.01.T01 | AT2G28540 | 42.105 | 57 | 27 | 1 | 273 | 323 | 9 | 65 | 9.77e-11 | 63.5 |
| MsG0880046377.01.T01 | AT2G28540 | 42.105 | 57 | 27 | 1 | 273 | 323 | 9 | 65 | 9.79e-11 | 63.5 |
Find 134 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATCGTCTTCCCAAATT+AGG | 0.144895 | 8:-72610665 | MsG0880046377.01.T01:five_prime_UTR |
| CCTCCAAGCTTTGCCATTAC+TGG | 0.202687 | 8:+72609746 | None:intergenic |
| GTGACTGATGGTTTGAATTT+AGG | 0.215191 | 8:-72609816 | MsG0880046377.01.T01:CDS |
| TTGTTTCTCATTTCATCTTA+TGG | 0.216723 | 8:-72609228 | MsG0880046377.01.T01:three_prime_UTR |
| ATTCAATACATTGAAATAAA+TGG | 0.224114 | 8:-72609147 | MsG0880046377.01.T01:three_prime_UTR |
| AGTAGTGGTGGGTGTTTCTC+TGG | 0.244371 | 8:-72610011 | MsG0880046377.01.T01:CDS |
| ACCCTCTTTCTGAGGCAAAA+AGG | 0.289977 | 8:-72610758 | None:intergenic |
| TCTATCGTCTTCCCAAATTA+GGG | 0.311423 | 8:-72610664 | MsG0880046377.01.T01:five_prime_UTR |
| CTTCAATTTCGCGGACCTAT+TGG | 0.323866 | 8:+72610426 | None:intergenic |
| GAGCAGGATGCTCGTTGTCC+TGG | 0.324362 | 8:-72609510 | MsG0880046377.01.T01:CDS |
| TCAAGATCCTCACAGCAAAT+TGG | 0.334616 | 8:+72609606 | None:intergenic |
| AGTTAGAGAGATAACGAAAA+TGG | 0.337044 | 8:+72610707 | None:intergenic |
| GTGTTGTGTGGCAATGATTC+CGG | 0.338325 | 8:-72610086 | MsG0880046377.01.T01:CDS |
| CCACACAACACACTACTATT+AGG | 0.338725 | 8:+72610098 | None:intergenic |
| TTCATAGGTCTAGTTGGTTT+AGG | 0.341217 | 8:-72609282 | MsG0880046377.01.T01:three_prime_UTR |
| AATGTGAAGTGGAAGCTTTA+AGG | 0.357114 | 8:+72609101 | None:intergenic |
| CGTTCCACCACTCCCTGGTT+TGG | 0.368101 | 8:+72609782 | None:intergenic |
| CTGTGAGGATCTTGATTTAA+CGG | 0.370410 | 8:-72609598 | MsG0880046377.01.T01:CDS |
| TGGTTTGAATTTAGGATGTT+TGG | 0.374976 | 8:-72609808 | MsG0880046377.01.T01:CDS |
| GATGAATCCGTTTCTGCAAC+GGG | 0.375384 | 8:+72609846 | None:intergenic |
| ATGTGAAGTGGAAGCTTTAA+GGG | 0.379852 | 8:+72609102 | None:intergenic |
| ACTCCGAATCACTGTCTTGA+TGG | 0.383993 | 8:+72610144 | None:intergenic |
| AAGAAGAAGGGTTGCAAGGA+TGG | 0.391810 | 8:-72610275 | MsG0880046377.01.T01:CDS |
| CTCACAGCAAATTGGACAAT+TGG | 0.402448 | 8:+72609614 | None:intergenic |
| CCACAAGAGGATTCTTGAGC+AGG | 0.406130 | 8:-72609526 | MsG0880046377.01.T01:CDS |
| ATGATGGATGCTTGGATGAT+TGG | 0.408221 | 8:-72609929 | MsG0880046377.01.T01:CDS |
| CGTTTGCTCTGTTTCCCCAC+TGG | 0.408315 | 8:+72610221 | None:intergenic |
| GAAACAGAGCAAACGTGAAT+TGG | 0.411752 | 8:-72610213 | MsG0880046377.01.T01:CDS |
| TGATGGATGCTTGGATGATT+GGG | 0.423751 | 8:-72609928 | MsG0880046377.01.T01:CDS |
| ACACTACTATTAGGACTGAT+AGG | 0.429535 | 8:+72610107 | None:intergenic |
| GCATACTATGCTGTTTCGAC+AGG | 0.434123 | 8:+72609688 | None:intergenic |
| GAATGAACCCGTTGCAGAAA+CGG | 0.447105 | 8:-72609853 | MsG0880046377.01.T01:CDS |
| GAGTGGTGGAACGGTTCCTC+GGG | 0.449106 | 8:-72609772 | MsG0880046377.01.T01:CDS |
| TGTTGTGTGGCAATGATTCC+GGG | 0.450115 | 8:-72610085 | MsG0880046377.01.T01:CDS |
| GTGTTAGCGGCGGAAGGAAT+CGG | 0.452634 | 8:+72610569 | None:intergenic |
| CCTCCTACAAAACGTGGATT+CGG | 0.456274 | 8:+72609666 | None:intergenic |
| GGAGTGGTGGAACGGTTCCT+CGG | 0.457706 | 8:-72609773 | MsG0880046377.01.T01:CDS |
| AGCAGGATGCTCGTTGTCCT+GGG | 0.459006 | 8:-72609509 | MsG0880046377.01.T01:CDS |
| ACGCTGCAAAATGATGGAAT+TGG | 0.460023 | 8:+72609058 | None:intergenic |
| GCCAGGGTTCTTGGTGTTAG+CGG | 0.468562 | 8:+72610556 | None:intergenic |
| GAAGGGTTGCAAGGATGGAT+TGG | 0.469248 | 8:-72610270 | MsG0880046377.01.T01:CDS |
| AGTAGTAGTTCTAGTAGTGG+TGG | 0.477973 | 8:-72610023 | MsG0880046377.01.T01:CDS |
| CATGTGCCGTCGTCGCCAGT+GGG | 0.478008 | 8:-72610236 | MsG0880046377.01.T01:CDS |
| CTATGCTGTTTCGACAGGTT+GGG | 0.479061 | 8:+72609693 | None:intergenic |
| TTCAGGTGCGGTGAAGAAGA+AGG | 0.484533 | 8:-72610288 | MsG0880046377.01.T01:intron |
| ATGCTCGTTGTCCTGGGTGC+AGG | 0.487799 | 8:-72609503 | MsG0880046377.01.T01:CDS |
| GGATGTTTGGATTCCAAACC+AGG | 0.490028 | 8:-72609795 | MsG0880046377.01.T01:CDS |
| ACAACGACGCTGCAAAATGA+TGG | 0.491457 | 8:+72609052 | None:intergenic |
| CTTATACTGCTTCAATTTCG+CGG | 0.494651 | 8:+72610417 | None:intergenic |
| CCAGTAATGGCAAAGCTTGG+AGG | 0.496535 | 8:-72609746 | MsG0880046377.01.T01:CDS |
| CAAACGTGAATTGGAGAAAG+TGG | 0.497957 | 8:-72610204 | MsG0880046377.01.T01:CDS |
| TGGCACAGACATGCGAGACC+AGG | 0.500008 | 8:+72609638 | None:intergenic |
| ATGGAGGTAGCCTTACTCTT+CGG | 0.500698 | 8:-72609437 | MsG0880046377.01.T01:CDS |
| GGAGGATGATGATGGATGCT+TGG | 0.501682 | 8:-72609937 | MsG0880046377.01.T01:CDS |
| GTAGTGGTGGGTGTTTCTCT+GGG | 0.502450 | 8:-72610010 | MsG0880046377.01.T01:CDS |
| CCACTGGCGACGACGGCACA+TGG | 0.507430 | 8:+72610237 | None:intergenic |
| GGAAACCATGGCTGAACCGT+TGG | 0.508059 | 8:+72610610 | None:intergenic |
| CGGAACGGCGGCGATTGAAT+CGG | 0.509579 | 8:+72610589 | None:intergenic |
| GAAACCATGGCTGAACCGTT+GGG | 0.510820 | 8:+72610611 | None:intergenic |
| CCATGTGCCGTCGTCGCCAG+TGG | 0.516220 | 8:-72610237 | MsG0880046377.01.T01:CDS |
| ACTATGCTGTTTCGACAGGT+TGG | 0.517407 | 8:+72609692 | None:intergenic |
| AGAAGTAGAACACGAGGAGG+AGG | 0.521090 | 8:-72609955 | MsG0880046377.01.T01:CDS |
| CTTGGATGATTGGGAGGCTG+TGG | 0.524760 | 8:-72609919 | MsG0880046377.01.T01:CDS |
| AGATGAATCCGTTTCTGCAA+CGG | 0.528437 | 8:+72609845 | None:intergenic |
| CTCTGGGAATATTACAGAAG+AGG | 0.529198 | 8:-72609994 | MsG0880046377.01.T01:CDS |
| CACGAGGAGGAGGATGATGA+TGG | 0.529916 | 8:-72609945 | MsG0880046377.01.T01:CDS |
| TGTTGGTATGTGAATACATA+AGG | 0.531389 | 8:-72609180 | MsG0880046377.01.T01:three_prime_UTR |
| CATCCAGTAATGGCAAAGCT+TGG | 0.537321 | 8:-72609749 | MsG0880046377.01.T01:CDS |
| ACTATAGACAAAATGTGAAG+TGG | 0.540347 | 8:+72609090 | None:intergenic |
| AACGAGCCAACCGAAGAGTA+AGG | 0.540467 | 8:+72609427 | None:intergenic |
| GACAGGTTGGGTAAAGTCTG+AGG | 0.544161 | 8:+72609705 | None:intergenic |
| GATCCATCAAGACAGTGATT+CGG | 0.544172 | 8:-72610147 | MsG0880046377.01.T01:CDS |
| TTCTTGGTGTTAGCGGCGGA+AGG | 0.545412 | 8:+72610563 | None:intergenic |
| CAGTAATGGCAAAGCTTGGA+GGG | 0.550530 | 8:-72609745 | MsG0880046377.01.T01:CDS |
| TTGATGCGCGTCGTGAACAA+TGG | 0.554675 | 8:-72610393 | MsG0880046377.01.T01:CDS |
| TTGGATTCCAAACCAGGGAG+TGG | 0.557492 | 8:-72609789 | MsG0880046377.01.T01:CDS |
| TCAGGTGCGGTGAAGAAGAA+GGG | 0.558988 | 8:-72610287 | MsG0880046377.01.T01:intron |
| GGAACCGTTCCACCACTCCC+TGG | 0.559516 | 8:+72609777 | None:intergenic |
| TTAAGGGAATATGCCATGGC+AGG | 0.559683 | 8:+72609118 | None:intergenic |
| GGCGAGGCGTAGAGGTGGAG+AGG | 0.561849 | 8:-72610180 | MsG0880046377.01.T01:CDS |
| ACTACCAGTGAAATTCGTCC+CGG | 0.566478 | 8:+72610067 | None:intergenic |
| TCATCTTGTGAAGTGACTGA+TGG | 0.567881 | 8:-72609828 | MsG0880046377.01.T01:CDS |
| GATTCCGGGACGAATTTCAC+TGG | 0.570168 | 8:-72610071 | MsG0880046377.01.T01:CDS |
| GTTCCTCGGGCATCCAGTAA+TGG | 0.570292 | 8:-72609759 | MsG0880046377.01.T01:CDS |
| GGCTCTATGCTTCTCATCGG+CGG | 0.570378 | 8:+72609884 | None:intergenic |
| GATTCCAAACCAGGGAGTGG+TGG | 0.572211 | 8:-72609786 | MsG0880046377.01.T01:CDS |
| ACACTTGCTTCTGTCTCGAT+AGG | 0.572811 | 8:+72609462 | None:intergenic |
| TTCACTGGTAGTAGCAGTGG+TGG | 0.572834 | 8:-72610056 | MsG0880046377.01.T01:CDS |
| GTAGTAGTTCTAGTAGTGGT+GGG | 0.574175 | 8:-72610022 | MsG0880046377.01.T01:CDS |
| AGGTAGCCTTACTCTTCGGT+TGG | 0.577834 | 8:-72609433 | MsG0880046377.01.T01:CDS |
| AAATCCCAACGGTTCAGCCA+TGG | 0.579557 | 8:-72610615 | MsG0880046377.01.T01:exon |
| AAACGTGAATTGGAGAAAGT+GGG | 0.580491 | 8:-72610203 | MsG0880046377.01.T01:CDS |
| GCCGCTAACACCAAGAACCC+TGG | 0.580532 | 8:-72610557 | MsG0880046377.01.T01:CDS |
| AGGGTTCTTGGTGTTAGCGG+CGG | 0.581566 | 8:+72610559 | None:intergenic |
| CAGCAAATTGGACAATTGGA+TGG | 0.582722 | 8:+72609618 | None:intergenic |
| GAGACAGAAGCAAGTGTGCA+TGG | 0.583579 | 8:-72609456 | MsG0880046377.01.T01:CDS |
| GGACTGATAGGACTGTTTGA+CGG | 0.584911 | 8:+72610119 | None:intergenic |
| AACGGGTTCATTCTGTGAAG+AGG | 0.588593 | 8:+72609863 | None:intergenic |
| AGCAGTAGTAGTTCTAGTAG+TGG | 0.604603 | 8:-72610026 | MsG0880046377.01.T01:CDS |
| TAAATGGTTACATCCTGCCA+TGG | 0.605167 | 8:-72609131 | MsG0880046377.01.T01:three_prime_UTR |
| AGCTTTAAGGGAATATGCCA+TGG | 0.606167 | 8:+72609114 | None:intergenic |
| CGTGAACAATGGCTATCTCA+AGG | 0.607296 | 8:-72610382 | MsG0880046377.01.T01:intron |
| GGCGATTGAATCGGAAACCA+TGG | 0.614198 | 8:+72610598 | None:intergenic |
| CCTGCTCAAGAATCCTCTTG+TGG | 0.614452 | 8:+72609526 | None:intergenic |
| TGTTTCCCCACTGGCGACGA+CGG | 0.617264 | 8:+72610230 | None:intergenic |
| AGAGGCTCTATGCTTCTCAT+CGG | 0.622264 | 8:+72609881 | None:intergenic |
| GGCACAGACATGCGAGACCA+GGG | 0.623059 | 8:+72609639 | None:intergenic |
| AGCCGAAAACCACAATTGCA+CGG | 0.626352 | 8:+72609561 | None:intergenic |
| TTCGTTAGTTGTGTATGCTG+TGG | 0.627569 | 8:-72609364 | MsG0880046377.01.T01:three_prime_UTR |
| ACAGGTTGGGTAAAGTCTGA+GGG | 0.629189 | 8:+72609706 | None:intergenic |
| AACGTGAATTGGAGAAAGTG+GGG | 0.634840 | 8:-72610202 | MsG0880046377.01.T01:CDS |
| CAAACCAGGGAGTGGTGGAA+CGG | 0.635703 | 8:-72609781 | MsG0880046377.01.T01:CDS |
| TCATATTGCTTCCTGCACCC+AGG | 0.637371 | 8:+72609492 | None:intergenic |
| AATTTCACTGGTAGTAGCAG+TGG | 0.639931 | 8:-72610059 | MsG0880046377.01.T01:CDS |
| TGAAGAAGAAGTAGAACACG+AGG | 0.644168 | 8:-72609961 | MsG0880046377.01.T01:CDS |
| GAGATAACGAAAATGGATCA+CGG | 0.646784 | 8:+72610714 | None:intergenic |
| CAATTGTCCAATTTGCTGTG+AGG | 0.649475 | 8:-72609613 | MsG0880046377.01.T01:CDS |
| GGTGAAGAAGAAGGGTTGCA+AGG | 0.653357 | 8:-72610279 | MsG0880046377.01.T01:CDS |
| ATGTGCCGTCGTCGCCAGTG+GGG | 0.653421 | 8:-72610235 | MsG0880046377.01.T01:CDS |
| GGCGGAAGGAATCGGAACGG+CGG | 0.658597 | 8:+72610577 | None:intergenic |
| GTTCTGTTAGCATGATCGAA+AGG | 0.664821 | 8:-72609407 | MsG0880046377.01.T01:CDS |
| GGAACCCCTCCTACAAAACG+TGG | 0.666447 | 8:+72609660 | None:intergenic |
| AGAAGAAGTAGAACACGAGG+AGG | 0.669536 | 8:-72609958 | MsG0880046377.01.T01:CDS |
| TGGATGCTTGGATGATTGGG+AGG | 0.674598 | 8:-72609925 | MsG0880046377.01.T01:CDS |
| TTGCCATTACTGGATGCCCG+AGG | 0.677388 | 8:+72609756 | None:intergenic |
| GATGTTTGGATTCCAAACCA+GGG | 0.680935 | 8:-72609794 | MsG0880046377.01.T01:CDS |
| AGCGGCGGAAGGAATCGGAA+CGG | 0.682697 | 8:+72610574 | None:intergenic |
| TGGTATGTGAATACATAAGG+TGG | 0.685753 | 8:-72609177 | MsG0880046377.01.T01:three_prime_UTR |
| ACGTGAATTGGAGAAAGTGG+GGG | 0.693905 | 8:-72610201 | MsG0880046377.01.T01:CDS |
| TCGAAAATATCAAATCCCAA+CGG | 0.697719 | 8:-72610626 | MsG0880046377.01.T01:five_prime_UTR |
| TTAATGTAGAATACTCATGT+TGG | 0.699610 | 8:-72609197 | MsG0880046377.01.T01:three_prime_UTR |
| GGTTGGGTAAAGTCTGAGGG+CGG | 0.713101 | 8:+72609709 | None:intergenic |
| ACAGAAGCAAGTGTGCATGG+AGG | 0.724066 | 8:-72609453 | MsG0880046377.01.T01:CDS |
| CCTAATAGTAGTGTGTTGTG+TGG | 0.739406 | 8:-72610098 | MsG0880046377.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAATACATTGAAATAAA+TGG | - | Chr8:72610606-72610625 | MsG0880046377.01.T01:exon | 15.0% |
| !! | GAAAATTATATAATCGAAAT+TGG | + | Chr8:72609250-72609269 | None:intergenic | 15.0% |
| !!! | TAATTTTGTTATCTTTGTTA+TGG | - | Chr8:72609440-72609459 | MsG0880046377.01.T01:CDS | 15.0% |
| ! | TTAATGTAGAATACTCATGT+TGG | - | Chr8:72610556-72610575 | MsG0880046377.01.T01:CDS | 25.0% |
| !! | TTGGAACATCTAATTTTCAT+AGG | - | Chr8:72610456-72610475 | MsG0880046377.01.T01:intron | 25.0% |
| !! | TTGTTTCTCATTTCATCTTA+TGG | - | Chr8:72610525-72610544 | MsG0880046377.01.T01:intron | 25.0% |
| !!! | CGATTTTTGTTTTGATCTAA+TGG | - | Chr8:72609412-72609431 | MsG0880046377.01.T01:CDS | 25.0% |
| !!! | TTATCTTTGTTATGGTTTTC+AGG | - | Chr8:72609448-72609467 | MsG0880046377.01.T01:CDS | 25.0% |
| ACTATAGACAAAATGTGAAG+TGG | + | Chr8:72610666-72610685 | None:intergenic | 30.0% | |
| AGTTAGAGAGATAACGAAAA+TGG | + | Chr8:72609049-72609068 | None:intergenic | 30.0% | |
| ATTCGCAAAAACCCTAATTT+GGG | + | Chr8:72609103-72609122 | None:intergenic | 30.0% | |
| TCGAAAATATCAAATCCCAA+CGG | - | Chr8:72609127-72609146 | MsG0880046377.01.T01:three_prime_UTR | 30.0% | |
| TGTTGGTATGTGAATACATA+AGG | - | Chr8:72610573-72610592 | MsG0880046377.01.T01:CDS | 30.0% | |
| ! | AATTCGATTTTCAGACCAAT+AGG | - | Chr8:72609312-72609331 | MsG0880046377.01.T01:three_prime_UTR | 30.0% |
| ! | CTAATTTTCATAGGTCTAGT+TGG | - | Chr8:72610465-72610484 | MsG0880046377.01.T01:intron | 30.0% |
| ! | TGGTTTGAATTTAGGATGTT+TGG | - | Chr8:72609945-72609964 | MsG0880046377.01.T01:CDS | 30.0% |
| AAACGTGAATTGGAGAAAGT+GGG | - | Chr8:72609550-72609569 | MsG0880046377.01.T01:CDS | 35.0% | |
| AATGTGAAGTGGAAGCTTTA+AGG | + | Chr8:72610655-72610674 | None:intergenic | 35.0% | |
| ACACTACTATTAGGACTGAT+AGG | + | Chr8:72609649-72609668 | None:intergenic | 35.0% | |
| CGACGCAAATAATGCAAAAA+AGG | + | Chr8:72610420-72610439 | None:intergenic | 35.0% | |
| CTGTGAGGATCTTGATTTAA+CGG | - | Chr8:72610155-72610174 | MsG0880046377.01.T01:CDS | 35.0% | |
| CTTATACTGCTTCAATTTCG+CGG | + | Chr8:72609339-72609358 | None:intergenic | 35.0% | |
| GAGATAACGAAAATGGATCA+CGG | + | Chr8:72609042-72609061 | None:intergenic | 35.0% | |
| GATTCGCAAAAACCCTAATT+TGG | + | Chr8:72609104-72609123 | None:intergenic | 35.0% | |
| GTGACTGATGGTTTGAATTT+AGG | - | Chr8:72609937-72609956 | MsG0880046377.01.T01:CDS | 35.0% | |
| TCTATCGTCTTCCCAAATTA+GGG | - | Chr8:72609089-72609108 | MsG0880046377.01.T01:three_prime_UTR | 35.0% | |
| TGGTATGTGAATACATAAGG+TGG | - | Chr8:72610576-72610595 | MsG0880046377.01.T01:CDS | 35.0% | |
| TTCTATCGTCTTCCCAAATT+AGG | - | Chr8:72609088-72609107 | MsG0880046377.01.T01:three_prime_UTR | 35.0% | |
| ! | ATGTGAAGTGGAAGCTTTAA+GGG | + | Chr8:72610654-72610673 | None:intergenic | 35.0% |
| ! | TCGTCTGTAATTTTCTAGGT+TGG | - | Chr8:72610437-72610456 | MsG0880046377.01.T01:intron | 35.0% |
| ! | TTCATAGGTCTAGTTGGTTT+AGG | - | Chr8:72610471-72610490 | MsG0880046377.01.T01:intron | 35.0% |
| !!! | TTTGTTATGGTTTTCAGGTG+CGG | - | Chr8:72609453-72609472 | MsG0880046377.01.T01:CDS | 35.0% |
| AACGTGAATTGGAGAAAGTG+GGG | - | Chr8:72609551-72609570 | MsG0880046377.01.T01:CDS | 40.0% | |
| AATTTCACTGGTAGTAGCAG+TGG | - | Chr8:72609694-72609713 | MsG0880046377.01.T01:CDS | 40.0% | |
| AGATGAATCCGTTTCTGCAA+CGG | + | Chr8:72609911-72609930 | None:intergenic | 40.0% | |
| CAAACGTGAATTGGAGAAAG+TGG | - | Chr8:72609549-72609568 | MsG0880046377.01.T01:CDS | 40.0% | |
| CAGCAAATTGGACAATTGGA+TGG | + | Chr8:72610138-72610157 | None:intergenic | 40.0% | |
| CCACACAACACACTACTATT+AGG | + | Chr8:72609658-72609677 | None:intergenic | 40.0% | |
| CCTAATAGTAGTGTGTTGTG+TGG | - | Chr8:72609655-72609674 | MsG0880046377.01.T01:CDS | 40.0% | |
| CTCACAGCAAATTGGACAAT+TGG | + | Chr8:72610142-72610161 | None:intergenic | 40.0% | |
| GAAACAGAGCAAACGTGAAT+TGG | - | Chr8:72609540-72609559 | MsG0880046377.01.T01:CDS | 40.0% | |
| GATCCATCAAGACAGTGATT+CGG | - | Chr8:72609606-72609625 | MsG0880046377.01.T01:CDS | 40.0% | |
| GATGTTTGGATTCCAAACCA+GGG | - | Chr8:72609959-72609978 | MsG0880046377.01.T01:CDS | 40.0% | |
| GTTCTGTTAGCATGATCGAA+AGG | - | Chr8:72610346-72610365 | MsG0880046377.01.T01:intron | 40.0% | |
| TAAATGGTTACATCCTGCCA+TGG | - | Chr8:72610622-72610641 | MsG0880046377.01.T01:five_prime_UTR | 40.0% | |
| TCAAGATCCTCACAGCAAAT+TGG | + | Chr8:72610150-72610169 | None:intergenic | 40.0% | |
| TCATCTTGTGAAGTGACTGA+TGG | - | Chr8:72609925-72609944 | MsG0880046377.01.T01:CDS | 40.0% | |
| TGAAGAAGAAGTAGAACACG+AGG | - | Chr8:72609792-72609811 | MsG0880046377.01.T01:CDS | 40.0% | |
| TTCGTTAGTTGTGTATGCTG+TGG | - | Chr8:72610389-72610408 | MsG0880046377.01.T01:CDS | 40.0% | |
| ! | ACGCTGCAAAATGATGGAAT+TGG | + | Chr8:72610698-72610717 | None:intergenic | 40.0% |
| ! | AGTTTTCTTCCGTGCAATTG+TGG | - | Chr8:72610183-72610202 | MsG0880046377.01.T01:CDS | 40.0% |
| ! | CTCTGGGAATATTACAGAAG+AGG | - | Chr8:72609759-72609778 | MsG0880046377.01.T01:CDS | 40.0% |
| ! | TGATGGATGCTTGGATGATT+GGG | - | Chr8:72609825-72609844 | MsG0880046377.01.T01:CDS | 40.0% |
| ! | TGCGTCGTCTGTAATTTTCT+AGG | - | Chr8:72610433-72610452 | MsG0880046377.01.T01:intron | 40.0% |
| ! | TTACCCTCTTCTTTTTGCCA+GGG | + | Chr8:72609216-72609235 | None:intergenic | 40.0% |
| ! | TTCCGTGCAATTGTGGTTTT+CGG | - | Chr8:72610190-72610209 | MsG0880046377.01.T01:CDS | 40.0% |
| ! | TTTGTCTCTTTTGCCACAAG+AGG | - | Chr8:72610214-72610233 | MsG0880046377.01.T01:CDS | 40.0% |
| !! | AGCAGTAGTAGTTCTAGTAG+TGG | - | Chr8:72609727-72609746 | MsG0880046377.01.T01:CDS | 40.0% |
| !! | AGCTTTAAGGGAATATGCCA+TGG | + | Chr8:72610642-72610661 | None:intergenic | 40.0% |
| !! | AGTAGTAGTTCTAGTAGTGG+TGG | - | Chr8:72609730-72609749 | MsG0880046377.01.T01:CDS | 40.0% |
| !! | ATGATGGATGCTTGGATGAT+TGG | - | Chr8:72609824-72609843 | MsG0880046377.01.T01:CDS | 40.0% |
| !! | CAATTGTCCAATTTGCTGTG+AGG | - | Chr8:72610140-72610159 | MsG0880046377.01.T01:CDS | 40.0% |
| !! | GTAGTAGTTCTAGTAGTGGT+GGG | - | Chr8:72609731-72609750 | MsG0880046377.01.T01:CDS | 40.0% |
| AAGAAGAAGGGTTGCAAGGA+TGG | - | Chr8:72609478-72609497 | MsG0880046377.01.T01:CDS | 45.0% | |
| ACAACGACGCTGCAAAATGA+TGG | + | Chr8:72610704-72610723 | None:intergenic | 45.0% | |
| ACACTTGCTTCTGTCTCGAT+AGG | + | Chr8:72610294-72610313 | None:intergenic | 45.0% | |
| ACGTGAATTGGAGAAAGTGG+GGG | - | Chr8:72609552-72609571 | MsG0880046377.01.T01:CDS | 45.0% | |
| ACTACCAGTGAAATTCGTCC+CGG | + | Chr8:72609689-72609708 | None:intergenic | 45.0% | |
| ACTCCGAATCACTGTCTTGA+TGG | + | Chr8:72609612-72609631 | None:intergenic | 45.0% | |
| AGAACCCTGGCAAAAAGAAG+AGG | - | Chr8:72609209-72609228 | MsG0880046377.01.T01:three_prime_UTR | 45.0% | |
| AGAAGAAGTAGAACACGAGG+AGG | - | Chr8:72609795-72609814 | MsG0880046377.01.T01:CDS | 45.0% | |
| AGAGGCTCTATGCTTCTCAT+CGG | + | Chr8:72609875-72609894 | None:intergenic | 45.0% | |
| AGCCGAAAACCACAATTGCA+CGG | + | Chr8:72610195-72610214 | None:intergenic | 45.0% | |
| CAGTAATGGCAAAGCTTGGA+GGG | - | Chr8:72610008-72610027 | MsG0880046377.01.T01:CDS | 45.0% | |
| CATCCAGTAATGGCAAAGCT+TGG | - | Chr8:72610004-72610023 | MsG0880046377.01.T01:CDS | 45.0% | |
| CCTCCTACAAAACGTGGATT+CGG | + | Chr8:72610090-72610109 | None:intergenic | 45.0% | |
| CGTGAACAATGGCTATCTCA+AGG | - | Chr8:72609371-72609390 | MsG0880046377.01.T01:three_prime_UTR | 45.0% | |
| CTGGCAAAAAGAAGAGGGTA+AGG | - | Chr8:72609215-72609234 | MsG0880046377.01.T01:three_prime_UTR | 45.0% | |
| CTTCAATTTCGCGGACCTAT+TGG | + | Chr8:72609330-72609349 | None:intergenic | 45.0% | |
| GAACCCTGGCAAAAAGAAGA+GGG | - | Chr8:72609210-72609229 | MsG0880046377.01.T01:three_prime_UTR | 45.0% | |
| GAATGAACCCGTTGCAGAAA+CGG | - | Chr8:72609900-72609919 | MsG0880046377.01.T01:CDS | 45.0% | |
| GATGAATCCGTTTCTGCAAC+GGG | + | Chr8:72609910-72609929 | None:intergenic | 45.0% | |
| GGACTGATAGGACTGTTTGA+CGG | + | Chr8:72609637-72609656 | None:intergenic | 45.0% | |
| GGATGTTTGGATTCCAAACC+AGG | - | Chr8:72609958-72609977 | MsG0880046377.01.T01:CDS | 45.0% | |
| GTGTTGTGTGGCAATGATTC+CGG | - | Chr8:72609667-72609686 | MsG0880046377.01.T01:CDS | 45.0% | |
| TGTTGTGTGGCAATGATTCC+GGG | - | Chr8:72609668-72609687 | MsG0880046377.01.T01:CDS | 45.0% | |
| TTAAGGGAATATGCCATGGC+AGG | + | Chr8:72610638-72610657 | None:intergenic | 45.0% | |
| ! | AACGGGTTCATTCTGTGAAG+AGG | + | Chr8:72609893-72609912 | None:intergenic | 45.0% |
| ! | ACAGGTTGGGTAAAGTCTGA+GGG | + | Chr8:72610050-72610069 | None:intergenic | 45.0% |
| ! | ATGCCGAATCCACGTTTTGT+AGG | - | Chr8:72610084-72610103 | MsG0880046377.01.T01:CDS | 45.0% |
| ! | ATGGAGGTAGCCTTACTCTT+CGG | - | Chr8:72610316-72610335 | MsG0880046377.01.T01:intron | 45.0% |
| ! | CGAATCCACGTTTTGTAGGA+GGG | - | Chr8:72610088-72610107 | MsG0880046377.01.T01:CDS | 45.0% |
| ! | CTTACCCTCTTCTTTTTGCC+AGG | + | Chr8:72609217-72609236 | None:intergenic | 45.0% |
| ! | CTTCTTTTTGCCAGGGTTCT+TGG | + | Chr8:72609209-72609228 | None:intergenic | 45.0% |
| ! | GAATCCACGTTTTGTAGGAG+GGG | - | Chr8:72610089-72610108 | MsG0880046377.01.T01:CDS | 45.0% |
| !! | ACTATGCTGTTTCGACAGGT+TGG | + | Chr8:72610064-72610083 | None:intergenic | 45.0% |
| !! | CTATGCTGTTTCGACAGGTT+GGG | + | Chr8:72610063-72610082 | None:intergenic | 45.0% |
| !! | GCATACTATGCTGTTTCGAC+AGG | + | Chr8:72610068-72610087 | None:intergenic | 45.0% |
| AAATCCCAACGGTTCAGCCA+TGG | - | Chr8:72609138-72609157 | MsG0880046377.01.T01:three_prime_UTR | 50.0% | |
| AACGAGCCAACCGAAGAGTA+AGG | + | Chr8:72610329-72610348 | None:intergenic | 50.0% | |
| ACAGAAGCAAGTGTGCATGG+AGG | - | Chr8:72610300-72610319 | MsG0880046377.01.T01:intron | 50.0% | |
| AGAAGTAGAACACGAGGAGG+AGG | - | Chr8:72609798-72609817 | MsG0880046377.01.T01:CDS | 50.0% | |
| CCACAAGAGGATTCTTGAGC+AGG | - | Chr8:72610227-72610246 | MsG0880046377.01.T01:CDS | 50.0% | |
| CCAGTAATGGCAAAGCTTGG+AGG | - | Chr8:72610007-72610026 | MsG0880046377.01.T01:CDS | 50.0% | |
| CCTCCAAGCTTTGCCATTAC+TGG | + | Chr8:72610010-72610029 | None:intergenic | 50.0% | |
| CCTGCTCAAGAATCCTCTTG+TGG | + | Chr8:72610230-72610249 | None:intergenic | 50.0% | |
| GAAACCATGGCTGAACCGTT+GGG | + | Chr8:72609145-72609164 | None:intergenic | 50.0% | |
| GAAGGGTTGCAAGGATGGAT+TGG | - | Chr8:72609483-72609502 | MsG0880046377.01.T01:CDS | 50.0% | |
| GAGACAGAAGCAAGTGTGCA+TGG | - | Chr8:72610297-72610316 | MsG0880046377.01.T01:intron | 50.0% | |
| GATTCCGGGACGAATTTCAC+TGG | - | Chr8:72609682-72609701 | MsG0880046377.01.T01:CDS | 50.0% | |
| GGCGATTGAATCGGAAACCA+TGG | + | Chr8:72609158-72609177 | None:intergenic | 50.0% | |
| GGTGAAGAAGAAGGGTTGCA+AGG | - | Chr8:72609474-72609493 | MsG0880046377.01.T01:CDS | 50.0% | |
| TCAGGTGCGGTGAAGAAGAA+GGG | - | Chr8:72609466-72609485 | MsG0880046377.01.T01:CDS | 50.0% | |
| TCATATTGCTTCCTGCACCC+AGG | + | Chr8:72610264-72610283 | None:intergenic | 50.0% | |
| TGGATGCTTGGATGATTGGG+AGG | - | Chr8:72609828-72609847 | MsG0880046377.01.T01:CDS | 50.0% | |
| TTCACTGGTAGTAGCAGTGG+TGG | - | Chr8:72609697-72609716 | MsG0880046377.01.T01:CDS | 50.0% | |
| TTCAGGTGCGGTGAAGAAGA+AGG | - | Chr8:72609465-72609484 | MsG0880046377.01.T01:CDS | 50.0% | |
| TTGATGCGCGTCGTGAACAA+TGG | - | Chr8:72609360-72609379 | MsG0880046377.01.T01:three_prime_UTR | 50.0% | |
| TTGGATTCCAAACCAGGGAG+TGG | - | Chr8:72609964-72609983 | MsG0880046377.01.T01:CDS | 50.0% | |
| ! | AGGTAGCCTTACTCTTCGGT+TGG | - | Chr8:72610320-72610339 | MsG0880046377.01.T01:intron | 50.0% |
| ! | CCGAATCCACGTTTTGTAGG+AGG | - | Chr8:72610087-72610106 | MsG0880046377.01.T01:CDS | 50.0% |
| ! | GACAGGTTGGGTAAAGTCTG+AGG | + | Chr8:72610051-72610070 | None:intergenic | 50.0% |
| !! | AGTAGTGGTGGGTGTTTCTC+TGG | - | Chr8:72609742-72609761 | MsG0880046377.01.T01:CDS | 50.0% |
| !! | GGAGGATGATGATGGATGCT+TGG | - | Chr8:72609816-72609835 | MsG0880046377.01.T01:CDS | 50.0% |
| !! | GTAGTGGTGGGTGTTTCTCT+GGG | - | Chr8:72609743-72609762 | MsG0880046377.01.T01:CDS | 50.0% |
| AATTGGAGAAAGTGGGGGCG+AGG | - | Chr8:72609557-72609576 | MsG0880046377.01.T01:CDS | 55.0% | |
| AGCAGGATGCTCGTTGTCCT+GGG | - | Chr8:72610244-72610263 | MsG0880046377.01.T01:CDS | 55.0% | |
| CACGAGGAGGAGGATGATGA+TGG | - | Chr8:72609808-72609827 | MsG0880046377.01.T01:CDS | 55.0% | |
| CGTTTGCTCTGTTTCCCCAC+TGG | + | Chr8:72609535-72609554 | None:intergenic | 55.0% | |
| CTTGGATGATTGGGAGGCTG+TGG | - | Chr8:72609834-72609853 | MsG0880046377.01.T01:CDS | 55.0% | |
| GATTCCAAACCAGGGAGTGG+TGG | - | Chr8:72609967-72609986 | MsG0880046377.01.T01:CDS | 55.0% | |
| GGAAACCATGGCTGAACCGT+TGG | + | Chr8:72609146-72609165 | None:intergenic | 55.0% | |
| GGAACCCCTCCTACAAAACG+TGG | + | Chr8:72610096-72610115 | None:intergenic | 55.0% | |
| GGCTCTATGCTTCTCATCGG+CGG | + | Chr8:72609872-72609891 | None:intergenic | 55.0% | |
| GGTTGGGTAAAGTCTGAGGG+CGG | + | Chr8:72610047-72610066 | None:intergenic | 55.0% | |
| GTGTTAGCGGCGGAAGGAAT+CGG | + | Chr8:72609187-72609206 | None:intergenic | 55.0% | |
| GTTCCTCGGGCATCCAGTAA+TGG | - | Chr8:72609994-72610013 | MsG0880046377.01.T01:CDS | 55.0% | |
| TTGCCATTACTGGATGCCCG+AGG | + | Chr8:72610000-72610019 | None:intergenic | 55.0% | |
| ! | CAAACCAGGGAGTGGTGGAA+CGG | - | Chr8:72609972-72609991 | MsG0880046377.01.T01:CDS | 55.0% |
| ! | GTTTTGTAGGAGGGGTTCCC+TGG | - | Chr8:72610097-72610116 | MsG0880046377.01.T01:CDS | 55.0% |
| !! | AGGGTTCTTGGTGTTAGCGG+CGG | + | Chr8:72609197-72609216 | None:intergenic | 55.0% |
| !! | GCCAGGGTTCTTGGTGTTAG+CGG | + | Chr8:72609200-72609219 | None:intergenic | 55.0% |
| !! | TTCTTGGTGTTAGCGGCGGA+AGG | + | Chr8:72609193-72609212 | None:intergenic | 55.0% |
| AGCGGCGGAAGGAATCGGAA+CGG | + | Chr8:72609182-72609201 | None:intergenic | 60.0% | |
| ATGCTCGTTGTCCTGGGTGC+AGG | - | Chr8:72610250-72610269 | MsG0880046377.01.T01:CDS | 60.0% | |
| CGGAACGGCGGCGATTGAAT+CGG | + | Chr8:72609167-72609186 | None:intergenic | 60.0% | |
| CGTTCCACCACTCCCTGGTT+TGG | + | Chr8:72609974-72609993 | None:intergenic | 60.0% | |
| GAGCAGGATGCTCGTTGTCC+TGG | - | Chr8:72610243-72610262 | MsG0880046377.01.T01:CDS | 60.0% | |
| GCCGCTAACACCAAGAACCC+TGG | - | Chr8:72609196-72609215 | MsG0880046377.01.T01:three_prime_UTR | 60.0% | |
| GGCACAGACATGCGAGACCA+GGG | + | Chr8:72610117-72610136 | None:intergenic | 60.0% | |
| TGGCACAGACATGCGAGACC+AGG | + | Chr8:72610118-72610137 | None:intergenic | 60.0% | |
| TGTTTCCCCACTGGCGACGA+CGG | + | Chr8:72609526-72609545 | None:intergenic | 60.0% | |
| ! | GAGTGGTGGAACGGTTCCTC+GGG | - | Chr8:72609981-72610000 | MsG0880046377.01.T01:CDS | 60.0% |
| ! | GGAGTGGTGGAACGGTTCCT+CGG | - | Chr8:72609980-72609999 | MsG0880046377.01.T01:CDS | 60.0% |
| AAAGTGGGGGCGAGGCGTAG+AGG | - | Chr8:72609565-72609584 | MsG0880046377.01.T01:CDS | 65.0% | |
| ATGTGCCGTCGTCGCCAGTG+GGG | - | Chr8:72609518-72609537 | MsG0880046377.01.T01:CDS | 65.0% | |
| CATGTGCCGTCGTCGCCAGT+GGG | - | Chr8:72609517-72609536 | MsG0880046377.01.T01:CDS | 65.0% | |
| GGAACCGTTCCACCACTCCC+TGG | + | Chr8:72609979-72609998 | None:intergenic | 65.0% | |
| GGCGGAAGGAATCGGAACGG+CGG | + | Chr8:72609179-72609198 | None:intergenic | 65.0% | |
| CCACTGGCGACGACGGCACA+TGG | + | Chr8:72609519-72609538 | None:intergenic | 70.0% | |
| CCATGTGCCGTCGTCGCCAG+TGG | - | Chr8:72609516-72609535 | MsG0880046377.01.T01:CDS | 70.0% | |
| GGCGAGGCGTAGAGGTGGAG+AGG | - | Chr8:72609573-72609592 | MsG0880046377.01.T01:CDS | 70.0% | |
| GTGGGGGCGAGGCGTAGAGG+TGG | - | Chr8:72609568-72609587 | MsG0880046377.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 72609006 | 72610769 | 72609006 | ID=MsG0880046377.01;Name=MsG0880046377.01 |
| Chr8 | mRNA | 72609006 | 72610769 | 72609006 | ID=MsG0880046377.01.T01;Parent=MsG0880046377.01;Name=MsG0880046377.01.T01;_AED=0.12;_eAED=0.12;_QI=151|1|1|1|1|1|3|395|348 |
| Chr8 | exon | 72609006 | 72610305 | 72609006 | ID=MsG0880046377.01.T01:exon:11496;Parent=MsG0880046377.01.T01 |
| Chr8 | exon | 72610383 | 72610449 | 72610383 | ID=MsG0880046377.01.T01:exon:11495;Parent=MsG0880046377.01.T01 |
| Chr8 | exon | 72610544 | 72610769 | 72610544 | ID=MsG0880046377.01.T01:exon:11494;Parent=MsG0880046377.01.T01 |
| Chr8 | five_prime_UTR | 72610619 | 72610769 | 72610619 | ID=MsG0880046377.01.T01:five_prime_utr;Parent=MsG0880046377.01.T01 |
| Chr8 | CDS | 72610544 | 72610618 | 72610544 | ID=MsG0880046377.01.T01:cds;Parent=MsG0880046377.01.T01 |
| Chr8 | CDS | 72610383 | 72610449 | 72610383 | ID=MsG0880046377.01.T01:cds;Parent=MsG0880046377.01.T01 |
| Chr8 | CDS | 72609401 | 72610305 | 72609401 | ID=MsG0880046377.01.T01:cds;Parent=MsG0880046377.01.T01 |
| Chr8 | three_prime_UTR | 72609006 | 72609400 | 72609006 | ID=MsG0880046377.01.T01:three_prime_utr;Parent=MsG0880046377.01.T01 |
| Gene Sequence |
| Protein sequence |
