AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001727.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001727.01.T01 MTR_1g041815 97.500 160 4 0 1 160 425 584 8.77e-108 325
MsG0180001727.01.T01 MTR_1g041835 96.129 155 6 0 1 155 425 579 2.64e-103 313
MsG0180001727.01.T01 MTR_1g075440 81.761 159 29 0 1 159 427 585 2.20e-89 277
MsG0180001727.01.T01 MTR_1g042310 78.981 157 33 0 1 157 381 537 8.71e-84 261
MsG0180001727.01.T01 MTR_1g042310 78.981 157 33 0 1 157 388 544 1.35e-83 261
MsG0180001727.01.T01 MTR_1g042310 78.981 157 33 0 1 157 425 581 3.17e-83 261
MsG0180001727.01.T01 MTR_1g041875 72.785 158 36 1 1 158 428 578 2.12e-65 214
MsG0180001727.01.T01 MTR_7g098200 56.818 176 75 1 1 176 314 488 3.55e-65 211
MsG0180001727.01.T01 MTR_7g098200 56.818 176 75 1 1 176 418 592 4.96e-64 211
MsG0180001727.01.T01 MTR_7g098200 56.818 176 75 1 1 176 428 602 6.43e-64 211
MsG0180001727.01.T01 MTR_1g041885 70.886 158 39 1 1 158 381 531 2.00e-62 206
MsG0180001727.01.T01 MTR_7g098040 54.651 172 74 1 1 168 433 604 9.95e-60 200
MsG0180001727.01.T01 MTR_7g098230 54.286 175 74 2 1 175 425 593 8.14e-59 197
MsG0180001727.01.T01 MTR_7g098210 61.314 137 53 0 8 144 310 446 1.71e-57 191
MsG0180001727.01.T01 MTR_7g098160 52.632 171 78 1 1 168 432 602 9.78e-57 192
MsG0180001727.01.T01 MTR_7g098090 52.601 173 80 1 1 171 437 609 4.69e-55 187
MsG0180001727.01.T01 MTR_7g098220 61.151 139 54 0 1 139 385 523 1.25e-54 186
MsG0180001727.01.T01 MTR_7g098220 61.151 139 54 0 1 139 429 567 1.93e-54 186
MsG0180001727.01.T01 MTR_7g098180 58.993 139 57 0 1 139 431 569 8.96e-53 181
MsG0180001727.01.T01 MTR_3g072300 46.715 137 73 0 8 144 429 565 5.23e-37 138
MsG0180001727.01.T01 MTR_3g005010 43.262 141 79 1 1 140 403 543 2.39e-36 136
MsG0180001727.01.T01 MTR_4g033325 42.857 140 79 1 1 139 285 424 2.14e-35 132
MsG0180001727.01.T01 MTR_4g033325 42.857 140 79 1 1 139 311 450 2.61e-35 132
MsG0180001727.01.T01 MTR_4g033325 42.857 140 79 1 1 139 409 548 5.67e-35 132
MsG0180001727.01.T01 MTR_7g067010 40.411 146 86 1 1 146 423 567 1.24e-34 131
MsG0180001727.01.T01 MTR_4g033385 40.000 140 83 1 1 139 312 451 2.85e-34 129
MsG0180001727.01.T01 MTR_4g015080 39.286 140 84 1 1 140 433 571 8.65e-33 126
MsG0180001727.01.T01 MTR_4g033310 39.416 137 82 1 4 139 350 486 1.70e-32 125
MsG0180001727.01.T01 MTR_4g033315 39.416 137 82 1 4 139 414 550 3.36e-32 125
MsG0180001727.01.T01 MTR_4g033310 39.416 137 82 1 4 139 414 550 3.36e-32 125
MsG0180001727.01.T01 MTR_0294s0020 39.286 140 84 1 1 139 409 548 6.31e-32 124
MsG0180001727.01.T01 MTR_5g055000 42.143 140 79 2 3 140 421 560 9.37e-32 124
MsG0180001727.01.T01 MTR_3g462710 36.364 143 90 1 1 143 316 457 7.56e-31 120
MsG0180001727.01.T01 MTR_3g462710 36.364 143 90 1 1 143 425 566 1.95e-30 120
MsG0180001727.01.T01 MTR_6g466390 71.622 74 21 0 163 236 22 95 6.82e-30 110
MsG0180001727.01.T01 MTR_7g055890 75.342 73 18 0 163 235 57 129 7.14e-30 112
MsG0180001727.01.T01 MTR_4g114340 39.416 137 81 1 1 137 422 556 7.47e-30 118
MsG0180001727.01.T01 MTR_3g069440 40.559 143 81 3 1 141 429 569 1.07e-29 118
MsG0180001727.01.T01 MTR_3g060830 71.233 73 21 0 164 236 54 126 1.23e-29 111
MsG0180001727.01.T01 MTR_3g014790 39.161 143 83 2 1 140 406 547 1.23e-29 117
MsG0180001727.01.T01 MTR_7g061360 72.603 73 20 0 164 236 54 126 2.63e-29 110
MsG0180001727.01.T01 MTR_7g061620 72.603 73 20 0 164 236 54 126 3.57e-29 110
MsG0180001727.01.T01 MTR_3g033840 71.233 73 21 0 164 236 46 118 5.03e-29 108
MsG0180001727.01.T01 MTR_5g067630 69.863 73 22 0 164 236 54 126 6.12e-29 109
MsG0180001727.01.T01 MTR_5g044895 71.233 73 21 0 164 236 54 126 6.32e-29 109
MsG0180001727.01.T01 MTR_0214s0030 69.863 73 22 0 164 236 33 105 1.23e-28 108
MsG0180001727.01.T01 MTR_4g061900 72.464 69 19 0 167 235 79 147 1.76e-28 107
MsG0180001727.01.T01 MTR_3g069420 39.521 167 92 4 1 160 430 594 1.88e-28 114
MsG0180001727.01.T01 MTR_5g072370 69.863 73 22 0 164 236 54 126 3.07e-28 107
MsG0180001727.01.T01 MTR_5g063995 68.493 73 23 0 164 236 54 126 3.45e-28 107
MsG0180001727.01.T01 MTR_5g038060 34.524 168 106 2 1 166 440 605 4.21e-28 113
MsG0180001727.01.T01 MTR_0083s0070 69.863 73 22 0 164 236 33 105 6.47e-28 106
MsG0180001727.01.T01 MTR_7g065080 39.869 153 77 3 1 148 342 484 7.63e-28 112
MsG0180001727.01.T01 MTR_8g038880 36.170 141 88 2 1 140 411 550 7.87e-28 112
MsG0180001727.01.T01 MTR_4g033330 39.837 123 73 1 1 122 411 533 8.10e-28 112
MsG0180001727.01.T01 MTR_7g065080 39.869 153 77 3 1 148 429 571 9.29e-28 112
MsG0180001727.01.T01 MTR_5g080380 70.833 72 21 0 164 235 28 99 1.13e-27 104
MsG0180001727.01.T01 MTR_5g012270 37.589 141 85 2 1 140 434 572 1.45e-27 112
MsG0180001727.01.T01 MTR_8g479440 52.252 111 49 1 150 260 31 137 1.66e-27 104
MsG0180001727.01.T01 MTR_4g024930 39.416 137 79 1 1 137 420 552 2.08e-27 111
MsG0180001727.01.T01 MTR_3g069500 38.298 141 77 2 1 141 431 561 2.59e-27 111
MsG0180001727.01.T01 MTR_1g036730 69.444 72 22 0 164 235 58 129 2.73e-27 105
MsG0180001727.01.T01 MTR_2g061240 68.493 73 23 0 164 236 16 88 3.78e-27 103
MsG0180001727.01.T01 MTR_3g028620 68.493 73 23 0 164 236 54 126 3.97e-27 104
MsG0180001727.01.T01 MTR_8g470030 68.493 73 23 0 164 236 54 126 3.97e-27 104
MsG0180001727.01.T01 MTR_5g009790 69.863 73 22 0 164 236 54 126 7.47e-27 107
MsG0180001727.01.T01 MTR_4g069290 50.407 123 52 3 163 277 57 178 8.77e-27 103
MsG0180001727.01.T01 MTR_5g048800 68.056 72 23 0 165 236 34 105 1.48e-26 102
MsG0180001727.01.T01 MTR_0360s0010 67.105 76 22 1 164 236 33 108 2.18e-26 102
MsG0180001727.01.T01 MTR_8g466300 65.753 73 25 0 164 236 47 119 3.66e-26 102
MsG0180001727.01.T01 MTR_7g051090 69.444 72 22 0 164 235 28 99 4.15e-26 101
MsG0180001727.01.T01 MTR_4g045603 65.753 73 25 0 164 236 54 126 9.87e-26 101
MsG0180001727.01.T01 MTR_8g469480 34.722 144 92 1 1 144 447 588 1.14e-25 106
MsG0180001727.01.T01 MTR_6g043270 65.753 73 25 0 164 236 54 126 1.19e-25 100
MsG0180001727.01.T01 MTR_6g042710 68.056 72 23 0 164 235 28 99 1.67e-25 99.8
MsG0180001727.01.T01 MTR_4g098800 38.686 137 78 1 1 137 442 572 1.86e-25 105
MsG0180001727.01.T01 MTR_8g103233 34.132 167 105 2 2 167 417 579 2.38e-25 105
MsG0180001727.01.T01 MTR_4g098800 38.686 137 78 1 1 137 507 637 3.01e-25 105
MsG0180001727.01.T01 MTR_7g013270 33.974 156 98 1 1 156 492 642 5.37e-25 104
MsG0180001727.01.T01 MTR_0005s0220 64.384 73 26 0 164 236 54 126 6.10e-25 99.0
MsG0180001727.01.T01 MTR_4g054700 65.753 73 25 0 164 236 21 93 6.51e-25 98.2
MsG0180001727.01.T01 MTR_5g014150 39.416 137 82 1 1 137 450 585 6.73e-25 104
MsG0180001727.01.T01 MTR_5g012290 35.461 141 88 2 1 140 432 570 7.56e-25 104
MsG0180001727.01.T01 MTR_2g058650 65.753 73 25 0 164 236 54 126 7.76e-25 98.6
MsG0180001727.01.T01 MTR_4g019580 37.143 140 84 2 1 140 434 569 1.81e-24 103
MsG0180001727.01.T01 MTR_1g116930 35.766 137 83 1 1 137 423 554 2.30e-24 102
MsG0180001727.01.T01 MTR_6g008690 32.886 149 94 3 1 146 396 541 1.27e-23 100
MsG0180001727.01.T01 MTR_4g107510 36.296 135 85 1 7 140 450 584 1.77e-23 100
MsG0180001727.01.T01 MTR_0520s0020 67.692 65 21 0 172 236 1 65 2.35e-23 93.2
MsG0180001727.01.T01 MTR_7g005930 33.987 153 96 1 1 153 435 582 2.57e-23 99.8
MsG0180001727.01.T01 MTR_3g112460 42.202 109 62 1 29 137 442 549 3.03e-23 99.4
MsG0180001727.01.T01 MTR_5g085850 36.620 142 79 2 1 142 428 558 4.57e-23 99.0
MsG0180001727.01.T01 MTR_3g112470 42.202 109 62 1 29 137 442 549 4.82e-23 99.0
MsG0180001727.01.T01 MTR_7g088825 34.507 142 89 3 2 141 427 566 6.66e-23 98.6
MsG0180001727.01.T01 MTR_5g055710 64.179 67 24 0 170 236 10 76 6.78e-23 92.0
MsG0180001727.01.T01 MTR_2g101560 30.622 209 129 6 1 206 429 624 7.52e-23 98.6
MsG0180001727.01.T01 MTR_7g088790 33.099 142 91 3 2 141 434 573 7.98e-23 98.2
MsG0180001727.01.T01 MTR_2g017750 33.562 146 93 2 1 142 445 590 9.97e-23 98.2
MsG0180001727.01.T01 MTR_4g107670 34.266 143 93 1 1 142 431 573 1.02e-22 97.8
MsG0180001727.01.T01 MTR_2g083590 65.217 69 23 1 167 235 61 128 6.94e-22 90.9
MsG0180001727.01.T01 MTR_8g469310 34.266 143 92 2 1 141 430 572 7.82e-22 95.5
MsG0180001727.01.T01 MTR_3g112450 37.681 138 76 4 1 137 423 551 1.36e-21 94.7
MsG0180001727.01.T01 MTR_7g056780 65.672 67 22 1 169 235 25 90 1.43e-21 89.0
MsG0180001727.01.T01 MTR_7g010820 40.336 119 68 2 1 116 429 547 2.30e-21 94.0
MsG0180001727.01.T01 MTR_5g053480 65.217 69 23 1 167 235 61 128 2.61e-21 89.4
MsG0180001727.01.T01 MTR_7g088820 30.000 170 103 4 2 169 320 475 3.64e-21 93.2
MsG0180001727.01.T01 MTR_7g088820 30.000 170 103 4 2 169 430 585 5.12e-21 93.2
MsG0180001727.01.T01 MTR_3g100980 36.879 141 83 2 1 140 415 550 5.85e-21 92.8
MsG0180001727.01.T01 MTR_7g088820 30.460 174 97 5 2 169 368 523 6.77e-21 92.4
MsG0180001727.01.T01 MTR_3g100980 36.879 141 83 2 1 140 443 578 7.91e-21 92.4
MsG0180001727.01.T01 MTR_4g033390 39.560 91 55 0 55 145 30 120 8.36e-21 85.9
MsG0180001727.01.T01 MTR_1g026740 38.053 113 70 0 25 137 441 553 8.46e-21 92.4
MsG0180001727.01.T01 MTR_1g085090 38.983 118 69 2 28 142 431 548 1.23e-20 92.0
MsG0180001727.01.T01 MTR_4g101380 34.416 154 92 3 1 153 435 580 1.30e-20 91.7
MsG0180001727.01.T01 MTR_2g101590 31.387 137 94 0 1 137 429 565 2.25e-20 91.3
MsG0180001727.01.T01 MTR_4g107610 33.728 169 99 4 1 160 436 600 2.48e-20 90.9
MsG0180001727.01.T01 MTR_2g101610 31.387 137 94 0 1 137 430 566 2.60e-20 90.9
MsG0180001727.01.T01 MTR_8g469470 33.333 141 92 1 1 141 444 582 7.74e-20 89.7
MsG0180001727.01.T01 MTR_7g111260 37.879 132 79 2 28 156 431 562 8.57e-20 89.4
MsG0180001727.01.T01 MTR_4g107580 29.012 162 112 1 1 159 431 592 8.71e-20 89.4
MsG0180001727.01.T01 MTR_1g026770 35.878 131 83 1 8 137 420 550 2.15e-19 88.2
MsG0180001727.01.T01 MTR_4g107530 32.895 152 99 2 1 149 439 590 3.05e-19 87.8
MsG0180001727.01.T01 MTR_2g005130 33.793 145 86 3 29 171 450 586 6.28e-19 87.0
MsG0180001727.01.T01 MTR_5g038380 34.266 143 90 3 1 142 437 576 7.50e-19 86.7
MsG0180001727.01.T01 MTR_2g101640 28.750 160 110 2 1 159 425 581 1.06e-18 86.3
MsG0180001727.01.T01 MTR_2g101650 31.159 138 94 1 1 137 426 563 1.55e-18 85.9
MsG0180001727.01.T01 MTR_7g006540 34.722 144 88 3 4 142 472 614 1.85e-18 85.5
MsG0180001727.01.T01 MTR_1g026750 37.168 113 71 0 25 137 442 554 2.02e-18 85.5
MsG0180001727.01.T01 MTR_6g036940 42.336 137 54 4 164 277 58 192 2.87e-18 82.0
MsG0180001727.01.T01 MTR_6g044850 77.083 48 11 0 188 235 2 49 4.04e-18 78.6
MsG0180001727.01.T01 MTR_4g011280 29.487 156 109 1 1 155 432 587 1.49e-17 82.8
MsG0180001727.01.T01 MTR_1g009200 33.588 131 86 1 8 137 434 564 1.75e-17 82.8
MsG0180001727.01.T01 MTR_4g033395 41.860 86 49 1 1 85 413 498 4.09e-17 81.3
MsG0180001727.01.T01 MTR_4g033375 43.023 86 48 1 1 85 413 498 5.03e-17 81.3
MsG0180001727.01.T01 MTR_5g084150 43.689 103 51 3 183 279 64 165 8.58e-17 77.0
MsG0180001727.01.T01 MTR_8g087810 33.333 147 93 3 1 142 431 577 1.46e-16 79.7
MsG0180001727.01.T01 MTR_4g123537 38.760 129 76 2 29 154 456 584 1.90e-16 79.7
MsG0180001727.01.T01 MTR_7g064780 34.815 135 80 3 1 131 434 564 3.86e-16 78.6
MsG0180001727.01.T01 MTR_1g053405 72.000 50 14 0 169 218 86 135 7.76e-16 73.2
MsG0180001727.01.T01 MTR_3g034000 72.340 47 13 0 164 210 54 100 3.86e-15 70.1
MsG0180001727.01.T01 MTR_7g051830 40.876 137 73 2 1 137 397 525 4.04e-15 75.5
MsG0180001727.01.T01 MTR_5g038190 29.787 141 97 1 1 141 431 569 4.22e-15 75.5
MsG0180001727.01.T01 MTR_7g052600 40.146 137 74 2 1 137 397 525 7.54e-15 74.7
MsG0180001727.01.T01 MTR_4g022300 65.455 55 19 0 164 218 46 100 1.12e-14 69.3
MsG0180001727.01.T01 MTR_4g026610 44.444 81 33 1 169 237 1 81 1.62e-14 68.2
MsG0180001727.01.T01 MTR_8g087780 34.694 147 91 3 1 142 430 576 2.31e-14 73.2
MsG0180001727.01.T01 MTR_1g057460 30.435 115 80 0 23 137 450 564 2.80e-14 73.2
MsG0180001727.01.T01 MTR_0236s0050 30.435 115 80 0 23 137 379 493 3.37e-14 72.8
MsG0180001727.01.T01 MTR_2g093640 29.496 139 84 2 1 139 422 546 5.70e-14 72.0
MsG0180001727.01.T01 MTR_1g057460 30.435 115 80 0 23 137 379 493 5.89e-14 72.0
MsG0180001727.01.T01 MTR_7g051880 36.496 137 79 2 1 137 397 525 4.43e-13 69.3
MsG0180001727.01.T01 MTR_7g064800 33.813 139 87 2 1 138 436 570 1.60e-12 67.8
MsG0180001727.01.T01 MTR_2g093160 28.058 139 87 2 1 139 421 546 5.24e-12 66.2
MsG0180001727.01.T01 MTR_2g093180 28.058 139 86 2 1 139 423 547 9.36e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001727.01.T01 AT5G46050 67.516 157 49 2 1 156 313 468 1.58e-61 202
MsG0180001727.01.T01 AT5G46050 67.516 157 49 2 1 156 425 580 3.20e-60 201
MsG0180001727.01.T01 AT5G46040 57.669 163 64 3 4 165 428 586 1.67e-49 172
MsG0180001727.01.T01 AT2G40460 45.455 132 72 0 11 142 426 557 5.39e-36 135
MsG0180001727.01.T01 AT5G01180 41.429 140 81 1 1 140 425 563 7.01e-34 129
MsG0180001727.01.T01 AT5G01180 41.429 140 81 1 1 140 425 563 7.01e-34 129
MsG0180001727.01.T01 AT5G01180 41.429 140 81 1 1 140 425 563 7.01e-34 129
MsG0180001727.01.T01 AT3G54450 41.135 141 81 2 1 140 403 542 9.53e-34 129
MsG0180001727.01.T01 AT1G22550 40.426 141 83 1 1 140 419 559 3.89e-33 127
MsG0180001727.01.T01 AT1G72140 40.559 143 84 1 1 142 412 554 1.20e-32 126
MsG0180001727.01.T01 AT3G54140 40.278 144 85 1 1 144 425 567 1.77e-32 125
MsG0180001727.01.T01 AT3G54140 40.278 144 85 1 1 144 425 567 1.77e-32 125
MsG0180001727.01.T01 AT1G22540 41.007 139 81 1 1 138 412 550 3.98e-31 122
MsG0180001727.01.T01 AT2G02040 37.226 137 85 1 1 136 442 578 8.26e-31 121
MsG0180001727.01.T01 AT3G53960 40.132 152 87 2 1 152 437 584 5.53e-29 116
MsG0180001727.01.T01 AT1G72130 35.971 139 83 1 1 139 282 414 3.05e-28 112
MsG0180001727.01.T01 AT1G72130 35.971 139 83 1 1 139 282 414 3.05e-28 112
MsG0180001727.01.T01 AT1G68570 38.732 142 85 2 2 141 428 569 4.38e-28 113
MsG0180001727.01.T01 AT2G26690 37.226 137 82 1 1 137 423 555 6.79e-28 112
MsG0180001727.01.T01 AT1G68570 38.732 142 85 2 2 141 398 539 7.10e-28 112
MsG0180001727.01.T01 AT2G26690 37.226 137 82 1 1 137 390 522 7.60e-28 112
MsG0180001727.01.T01 AT2G26690 37.226 137 82 1 1 137 378 510 8.20e-28 112
MsG0180001727.01.T01 AT1G72130 35.971 139 83 1 1 139 400 532 1.20e-27 112
MsG0180001727.01.T01 AT1G22570 41.844 141 78 2 1 140 423 560 2.29e-27 111
MsG0180001727.01.T01 AT1G22570 41.844 141 78 2 1 140 386 523 2.40e-27 111
MsG0180001727.01.T01 AT1G72120 39.716 141 84 1 1 140 412 552 7.16e-27 110
MsG0180001727.01.T01 AT2G02020 38.971 136 76 3 1 132 406 538 9.96e-27 109
MsG0180001727.01.T01 AT2G02020 38.971 136 76 3 1 132 385 517 1.04e-26 109
MsG0180001727.01.T01 AT1G72125 37.589 141 87 1 1 140 416 556 1.30e-25 106
MsG0180001727.01.T01 AT1G32450 32.353 170 113 2 1 169 446 614 1.38e-24 103
MsG0180001727.01.T01 AT1G69870 35.714 140 88 1 1 140 457 594 5.28e-24 102
MsG0180001727.01.T01 AT1G27040 33.813 139 92 0 1 139 422 560 1.11e-23 100
MsG0180001727.01.T01 AT1G27040 33.813 139 92 0 1 139 418 556 1.32e-23 100
MsG0180001727.01.T01 AT1G27040 33.813 139 92 0 1 139 390 528 1.41e-23 100
MsG0180001727.01.T01 AT1G18880 35.417 144 89 1 1 140 423 566 2.32e-23 99.8
MsG0180001727.01.T01 AT5G19640 36.242 149 89 2 1 148 449 592 5.27e-23 99.0
MsG0180001727.01.T01 AT5G14940 33.562 146 94 2 1 145 403 546 6.59e-23 98.6
MsG0180001727.01.T01 AT1G69850 34.014 147 96 1 1 146 439 585 1.12e-22 97.8
MsG0180001727.01.T01 AT1G62200 30.827 133 84 1 1 133 456 580 1.13e-22 97.8
MsG0180001727.01.T01 AT1G62200 30.827 133 84 1 1 133 485 609 1.38e-22 97.8
MsG0180001727.01.T01 AT3G21670 34.028 144 90 2 29 172 451 589 1.46e-22 97.4
MsG0180001727.01.T01 AT1G62200 30.827 133 84 1 1 133 499 623 1.77e-22 97.4
MsG0180001727.01.T01 AT2G37900 34.752 141 84 1 1 141 435 567 1.59e-21 94.7
MsG0180001727.01.T01 AT2G37900 34.752 141 84 1 1 141 356 488 2.21e-21 94.0
MsG0180001727.01.T01 AT1G52190 27.168 173 114 3 1 172 429 590 3.52e-21 93.6
MsG0180001727.01.T01 AT1G12110 33.571 140 89 3 1 140 434 569 4.29e-21 93.2
MsG0180001727.01.T01 AT3G16180 28.736 174 112 3 1 173 429 591 5.04e-21 93.2
MsG0180001727.01.T01 AT4G21680 35.252 139 90 0 1 139 434 572 1.83e-20 91.3
MsG0180001727.01.T01 AT3G01350 31.206 141 94 2 8 145 416 556 3.84e-20 90.5
MsG0180001727.01.T01 AT3G47960 32.877 146 92 3 1 141 465 609 4.43e-20 90.5
MsG0180001727.01.T01 AT5G62680 30.137 146 98 1 1 142 449 594 2.55e-19 88.2
MsG0180001727.01.T01 AT5G62730 35.043 117 75 1 27 142 471 587 3.77e-19 87.4
MsG0180001727.01.T01 AT5G62730 35.043 117 75 1 27 142 412 528 4.41e-19 87.4
MsG0180001727.01.T01 AT1G33440 35.461 141 80 3 1 137 434 567 1.17e-18 86.3
MsG0180001727.01.T01 AT5G13400 35.000 140 89 1 4 141 473 612 9.61e-18 83.6
MsG0180001727.01.T01 AT1G69860 35.000 140 82 3 1 140 419 549 3.71e-17 81.6
MsG0180001727.01.T01 AT1G27080 29.167 168 105 2 1 168 417 570 4.49e-17 81.3
MsG0180001727.01.T01 AT1G27080 29.167 168 105 2 1 168 375 528 6.05e-17 80.9
MsG0180001727.01.T01 AT3G45680 34.921 126 74 2 15 140 425 542 6.87e-16 77.8
MsG0180001727.01.T01 AT3G45720 30.496 141 82 3 1 140 415 540 1.00e-15 77.4
MsG0180001727.01.T01 AT1G59740 34.646 127 80 3 29 153 464 589 1.01e-15 77.4
MsG0180001727.01.T01 AT5G28470 33.094 139 85 4 1 137 419 551 5.05e-15 75.5
MsG0180001727.01.T01 AT5G28470 33.094 139 85 4 1 137 421 553 5.50e-15 75.1
MsG0180001727.01.T01 AT3G45710 31.746 126 79 2 15 140 426 544 1.10e-14 74.3
MsG0180001727.01.T01 AT5G11570 35.780 109 66 1 29 137 372 476 2.77e-14 73.2
MsG0180001727.01.T01 AT3G25260 32.117 137 80 3 1 137 392 515 1.67e-13 70.9
MsG0180001727.01.T01 AT3G45700 31.746 126 78 2 15 140 415 532 1.90e-13 70.5
MsG0180001727.01.T01 AT3G25280 31.967 122 81 1 16 137 402 521 3.63e-13 69.7
MsG0180001727.01.T01 AT3G45660 26.429 140 97 1 1 140 409 542 1.45e-11 65.1
MsG0180001727.01.T01 AT3G45660 26.429 140 97 1 1 140 409 542 1.45e-11 65.1
MsG0180001727.01.T01 AT3G45660 26.429 140 97 1 1 140 430 563 2.04e-11 64.7
MsG0180001727.01.T01 AT3G45650 26.429 140 97 1 1 140 410 543 2.48e-11 64.3

Find 40 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAGCTCTTCATGCTTTC+TGG 0.052596 1:-26092917 None:intergenic
TTCAACTACTCCATGTTCTT+TGG 0.279867 1:-26092780 None:intergenic
GAACATGGAGTAGTTGAAAA+TGG 0.302397 1:+26092785 MsG0180001727.01.T01:CDS
CAACTTTCACTGAAAGATAT+AGG 0.345759 1:+26092747 MsG0180001727.01.T01:CDS
TAAGAAGAAGTTGGTTAAGA+TGG 0.362631 1:+26095637 MsG0180001727.01.T01:CDS
TGAGAAGTTGCGGCGGTGGT+TGG 0.425775 1:+26097257 MsG0180001727.01.T01:CDS
TCCAGAAAGCATGAAGAGCT+TGG 0.454099 1:+26092916 MsG0180001727.01.T01:CDS
GAAGTTGCGGCGGTGGTTGG+AGG 0.458931 1:+26097260 MsG0180001727.01.T01:CDS
AGTGCTTGCAGAAGAATTGA+AGG 0.472723 1:+26093180 MsG0180001727.01.T01:CDS
TAAGATGGAGACTGAGTGTC+AGG 0.480178 1:+26095652 MsG0180001727.01.T01:CDS
CCAGAAAGCATGAAGAGCTT+GGG 0.487543 1:+26092917 MsG0180001727.01.T01:CDS
TCAATGACTAGCTTAGGCAT+TGG 0.491759 1:+26092950 MsG0180001727.01.T01:CDS
CTGAGGAACATGGTCACAAA+GGG 0.505036 1:+26093017 MsG0180001727.01.T01:CDS
AGTAAAATGAATATGCTCAA+TGG 0.506359 1:-26092818 None:intergenic
GTCGATGACACCGTCGGGGA+GGG 0.519206 1:+26097228 MsG0180001727.01.T01:CDS
TCGGTGAGAAGTTGCGGCGG+TGG 0.529644 1:+26097253 MsG0180001727.01.T01:CDS
TCTTATTCAATGACTAGCTT+AGG 0.530851 1:+26092944 MsG0180001727.01.T01:CDS
AGACCAACATTCCTCACTTG+TGG 0.533951 1:-26095695 None:intergenic
CTTAGTGTAGCCAAAGAACA+TGG 0.548011 1:+26092770 MsG0180001727.01.T01:CDS
AATCCACAAGTGAGGAATGT+TGG 0.573250 1:+26095692 MsG0180001727.01.T01:CDS
TAGAAAAGAAGAAGAGCAAG+AGG 0.573860 1:+26095490 MsG0180001727.01.T01:CDS
GACTGAGTGTCAGGCTACTG+TGG 0.579759 1:+26095661 MsG0180001727.01.T01:CDS
ATGTGAGTCTAAGAAGAAGT+TGG 0.585822 1:+26095628 MsG0180001727.01.T01:CDS
AGGAACATGGTCACAAAGGG+TGG 0.587585 1:+26093020 MsG0180001727.01.T01:CDS
GACACCGTCGGGGAGGGTGT+CGG 0.595395 1:+26097234 MsG0180001727.01.T01:CDS
CATGGAGTAGTTGAAAATGG+AGG 0.610149 1:+26092788 MsG0180001727.01.T01:CDS
AGGGTGTCGGTGAGAAGTTG+CGG 0.614219 1:+26097247 MsG0180001727.01.T01:CDS
AAAAGAAGAAGAGCAAGAGG+TGG 0.614723 1:+26095493 MsG0180001727.01.T01:CDS
TGTCGATGACACCGTCGGGG+AGG 0.615814 1:+26097227 MsG0180001727.01.T01:CDS
GAGAAGAGTTTGTTACGCGG+TGG 0.620838 1:+26097291 MsG0180001727.01.T01:CDS
AATCAAGATGAGAAGCATTG+AGG 0.621145 1:-26093054 None:intergenic
ACTGAGGAACATGGTCACAA+AGG 0.621642 1:+26093016 MsG0180001727.01.T01:CDS
CTCACCGACACCCTCCCCGA+CGG 0.629690 1:-26097238 None:intergenic
TCACACATCACTGAGGAACA+TGG 0.632557 1:+26093007 MsG0180001727.01.T01:CDS
TGAGTGTCAGGCTACTGTGG+TGG 0.657430 1:+26095664 MsG0180001727.01.T01:CDS
TGGAAGACAATCCACAAGTG+AGG 0.682889 1:+26095684 MsG0180001727.01.T01:CDS
GTGTCGGTGAGAAGTTGCGG+CGG 0.690973 1:+26097250 MsG0180001727.01.T01:CDS
GATGAGAAGAGTTTGTTACG+CGG 0.731926 1:+26097288 MsG0180001727.01.T01:CDS
GAGAAAGTTGAACTTCAGTG+TGG 0.737303 1:+26095587 MsG0180001727.01.T01:CDS
AACAGTTTCACACATCACTG+AGG 0.750967 1:+26093000 MsG0180001727.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTAAAATTTGGATATT+TGG + Chr1:26096310-26096329 MsG0180001727.01.T01:intron 10.0%
!!! ACATAAATATTTTACATATT+TGG - Chr1:26096788-26096807 None:intergenic 10.0%
!!! ATAAAACTCATTTTAAAATT+TGG + Chr1:26096073-26096092 MsG0180001727.01.T01:intron 10.0%
!!! CATTTTATCATTTTAAAATT+TGG + Chr1:26096135-26096154 MsG0180001727.01.T01:intron 10.0%
!!! TATAAAACTCATTTTAAATT+TGG + Chr1:26095976-26095995 MsG0180001727.01.T01:intron 10.0%
!!! TTAGAATTTTAGAATAAATT+TGG + Chr1:26096253-26096272 MsG0180001727.01.T01:intron 10.0%
!! ATAAAGGATGTATAAAATTT+GGG - Chr1:26095023-26095042 None:intergenic 15.0%
!! TGAAAATTTCGTTATTATTT+AGG + Chr1:26095186-26095205 MsG0180001727.01.T01:intron 15.0%
!! TTAGAATAAATTTGGATATT+TGG + Chr1:26096261-26096280 MsG0180001727.01.T01:intron 15.0%
!! TTATTTGTAGTTAATTTCAT+TGG + Chr1:26096821-26096840 MsG0180001727.01.T01:intron 15.0%
!!! CAAAATATTTATCAAGTTTT+TGG + Chr1:26095129-26095148 MsG0180001727.01.T01:intron 15.0%
!!! CATTTTAAAATTTGGATATT+TGG + Chr1:26096143-26096162 MsG0180001727.01.T01:intron 15.0%
!!! TAGATTGTCATTTTAAAATT+TGG + Chr1:26096177-26096196 MsG0180001727.01.T01:intron 15.0%
!! AAACAACTAATTTCAAAAGA+AGG - Chr1:26094451-26094470 None:intergenic 20.0%
!! AAATTCACTTAAGAGATTAA+GGG + Chr1:26094756-26094775 MsG0180001727.01.T01:intron 20.0%
!! AACATACATATAAACAATAG+TGG + Chr1:26097109-26097128 MsG0180001727.01.T01:intron 20.0%
!! AATATCATTCGTTATGAAAA+TGG + Chr1:26095367-26095386 MsG0180001727.01.T01:intron 20.0%
!! AGTTATGATTTAGAGATTAA+CGG + Chr1:26094710-26094729 MsG0180001727.01.T01:intron 20.0%
!! ATTATTACTTCGATAATCTT+TGG + Chr1:26095098-26095117 MsG0180001727.01.T01:intron 20.0%
!! ATTTCCAAATGTTTGAAAAA+TGG + Chr1:26096875-26096894 MsG0180001727.01.T01:intron 20.0%
!! CATAAAGGATGTATAAAATT+TGG - Chr1:26095024-26095043 None:intergenic 20.0%
!! TAAAGGATGTATAAAATTTG+GGG - Chr1:26095022-26095041 None:intergenic 20.0%
!! TAATTGTAATTCAGATGATT+GGG + Chr1:26094043-26094062 MsG0180001727.01.T01:intron 20.0%
!! TACTAAGTAGAAATTAACAA+CGG + Chr1:26095053-26095072 MsG0180001727.01.T01:intron 20.0%
!! TTAGTAATTTCACATCATAA+AGG - Chr1:26095039-26095058 None:intergenic 20.0%
!! TTTCCAAATGTTTGAAAAAT+GGG + Chr1:26096876-26096895 MsG0180001727.01.T01:intron 20.0%
!!! AAATTTGGATATTTGGATTT+TGG + Chr1:26096150-26096169 MsG0180001727.01.T01:intron 20.0%
!!! CTTGAATTTGTTTTTCAATA+CGG + Chr1:26096545-26096564 MsG0180001727.01.T01:intron 20.0%
!!! TCTGGTTATTGTTTTTTTAT+TGG - Chr1:26093971-26093990 None:intergenic 20.0%
!!! TTGGATTTTAGATTTTAGAT+TGG + Chr1:26096329-26096348 MsG0180001727.01.T01:intron 20.0%
!!! TTTGTTCTGAAAAATACATT+TGG - Chr1:26093292-26093311 None:intergenic 20.0%
! AAAAAAACAATAACCAGAGA+TGG + Chr1:26093973-26093992 MsG0180001727.01.T01:intron 25.0%
! AAAATCCAAAATCCAATCTA+TGG + Chr1:26096366-26096385 MsG0180001727.01.T01:intron 25.0%
! AAAATGATAAAATGAGTGTG+TGG - Chr1:26096129-26096148 None:intergenic 25.0%
! AAAGGATGTATAAAATTTGG+GGG - Chr1:26095021-26095040 None:intergenic 25.0%
! AACTAAAACACAAAACTAAC+TGG - Chr1:26094112-26094131 None:intergenic 25.0%
! AGTAAAATGAATATGCTCAA+TGG - Chr1:26092821-26092840 None:intergenic 25.0%
! ATATTAAATTCATATCCACG+AGG - Chr1:26095080-26095099 None:intergenic 25.0%
! ATTAGCAATAAATAGAGAAG+AGG - Chr1:26093540-26093559 None:intergenic 25.0%
! CAAATTCACTTAAGAGATTA+AGG + Chr1:26094755-26094774 MsG0180001727.01.T01:intron 25.0%
! CTAAAAATTTCCTCAAAATC+AGG - Chr1:26094222-26094241 None:intergenic 25.0%
! GTAATTGTAATTCAGATGAT+TGG + Chr1:26094042-26094061 MsG0180001727.01.T01:intron 25.0%
! GTCAATCATAAACATATACA+AGG - Chr1:26094564-26094583 None:intergenic 25.0%
! GTTAATCTATTGTTAGACTA+GGG + Chr1:26094830-26094849 MsG0180001727.01.T01:intron 25.0%
! TCTGATAAGAGTTTATAAAG+AGG - Chr1:26096503-26096522 None:intergenic 25.0%
! TGTTAATCTATTGTTAGACT+AGG + Chr1:26094829-26094848 MsG0180001727.01.T01:intron 25.0%
! TTAAGTTAATCAGATTACCT+AGG - Chr1:26094662-26094681 None:intergenic 25.0%
! TTCCCATAAGTAAAAATTGA+GGG - Chr1:26092844-26092863 None:intergenic 25.0%
!! ATTTTGGATAGATTGGATTT+TGG + Chr1:26096227-26096246 MsG0180001727.01.T01:intron 25.0%
!! CTATATGAGTATTGTTTCAA+AGG - Chr1:26096759-26096778 None:intergenic 25.0%
!! CTTTTCAATTCGACAAAAAT+CGG + Chr1:26094242-26094261 MsG0180001727.01.T01:intron 25.0%
!! TGATTACTACTATGCATTTT+TGG + Chr1:26093072-26093091 MsG0180001727.01.T01:CDS 25.0%
!! TTGGATTTTAGATTGGATTT+TGG + Chr1:26096211-26096230 MsG0180001727.01.T01:intron 25.0%
!! TTGGATTTTGGATTTTAGAT+TGG + Chr1:26096162-26096181 MsG0180001727.01.T01:intron 25.0%
!! TTTTCAATTCGACAAAAATC+GGG + Chr1:26094243-26094262 MsG0180001727.01.T01:intron 25.0%
!!! AGATTAGTTTATTGGTTCTT+GGG + Chr1:26093240-26093259 MsG0180001727.01.T01:intron 25.0%
!!! CAAATTTTAAAATGAGTGTG+TGG - Chr1:26096102-26096121 None:intergenic 25.0%
!!! CACACACTCATTTTAAAATT+TGG + Chr1:26096100-26096119 MsG0180001727.01.T01:intron 25.0%
!!! CTATTTTAGATGAATTCTTG+AGG + Chr1:26095546-26095565 MsG0180001727.01.T01:CDS 25.0%
!!! TCGGTTTTGAAATAACTATA+TGG - Chr1:26096466-26096485 None:intergenic 25.0%
AAACCATTATGAAGAGACAA+TGG + Chr1:26097017-26097036 MsG0180001727.01.T01:intron 30.0%
AAACCATTGTCTCTTCATAA+TGG - Chr1:26097023-26097042 None:intergenic 30.0%
AACATTTGGAAATCATACAC+AGG - Chr1:26096868-26096887 None:intergenic 30.0%
AAGCATTATAGAGATTCAGT+TGG + Chr1:26094891-26094910 MsG0180001727.01.T01:intron 30.0%
AATAAACCTCTTTCATGACA+TGG + Chr1:26094070-26094089 MsG0180001727.01.T01:intron 30.0%
AATCCAATCTATCCATAGAT+TGG - Chr1:26096381-26096400 None:intergenic 30.0%
AATCCAATCTATGGATAGAT+TGG + Chr1:26096375-26096394 MsG0180001727.01.T01:intron 30.0%
ACAATCAATGTCAAGATGTT+TGG + Chr1:26093727-26093746 MsG0180001727.01.T01:intron 30.0%
ACGGCTATTAAAATCTCAAA+CGG + Chr1:26094729-26094748 MsG0180001727.01.T01:intron 30.0%
ATCTCTTCAGAATCAATAAG+GGG - Chr1:26095346-26095365 None:intergenic 30.0%
ATGATAGTCTCCACAAAAAT+CGG - Chr1:26095442-26095461 None:intergenic 30.0%
ATTCATACATTCAAGAAGCT+AGG - Chr1:26094594-26094613 None:intergenic 30.0%
CAACTTTCACTGAAAGATAT+AGG + Chr1:26092747-26092766 MsG0180001727.01.T01:CDS 30.0%
CTTTGTGCTTTACTATTGAA+AGG + Chr1:26095285-26095304 MsG0180001727.01.T01:intron 30.0%
GAACCAATAAACTAATCTCT+TGG - Chr1:26093238-26093257 None:intergenic 30.0%
GAATAAGACTAGATTTCCAA+TGG - Chr1:26094521-26094540 None:intergenic 30.0%
GAGAGTTCATACAAATTACA+TGG - Chr1:26094491-26094510 None:intergenic 30.0%
GATCTCTTCAGAATCAATAA+GGG - Chr1:26095347-26095366 None:intergenic 30.0%
GGTAATCTGATTAACTTAAC+TGG + Chr1:26094663-26094682 MsG0180001727.01.T01:intron 30.0%
GGTGGTTTAGAAATTTAATG+TGG - Chr1:26094929-26094948 None:intergenic 30.0%
GTTCCCATAAGTAAAAATTG+AGG - Chr1:26092845-26092864 None:intergenic 30.0%
TCTTGATTTCCATGATACTA+AGG + Chr1:26093940-26093959 MsG0180001727.01.T01:intron 30.0%
TCTTTACCAAAGAATTCCAA+TGG - Chr1:26093866-26093885 None:intergenic 30.0%
TGATCTCTTCAGAATCAATA+AGG - Chr1:26095348-26095367 None:intergenic 30.0%
TTCATACATTCAAGAAGCTA+GGG - Chr1:26094593-26094612 None:intergenic 30.0%
TTGGAAAATCCTTAGTATCA+TGG - Chr1:26093952-26093971 None:intergenic 30.0%
! ACCTTTTGAACCAACTTTTA+CGG + Chr1:26094946-26094965 MsG0180001727.01.T01:intron 30.0%
! ACTCCCTCAATTTTTACTTA+TGG + Chr1:26092838-26092857 MsG0180001727.01.T01:CDS 30.0%
! AGATTGGATTTTGGATAGAT+TGG + Chr1:26096220-26096239 MsG0180001727.01.T01:intron 30.0%
! ATACGATTGTGAAACTGTTT+TGG + Chr1:26093611-26093630 MsG0180001727.01.T01:intron 30.0%
! CTCCCTCAATTTTTACTTAT+GGG + Chr1:26092839-26092858 MsG0180001727.01.T01:CDS 30.0%
! GTTAAGGGTTCAAAATTTTG+AGG + Chr1:26094337-26094356 MsG0180001727.01.T01:intron 30.0%
! TAAGAAGAAGTTGGTTAAGA+TGG + Chr1:26095637-26095656 MsG0180001727.01.T01:CDS 30.0%
! TATACAAGGCATTACATTCA+AGG - Chr1:26094550-26094569 None:intergenic 30.0%
! TCTATCCATAGATTGGATTT+TGG - Chr1:26096374-26096393 None:intergenic 30.0%
! TCTATGGATAGATTGGATTT+TGG + Chr1:26096382-26096401 MsG0180001727.01.T01:intron 30.0%
!! ACTCCAAGAGATTAGTTTAT+TGG + Chr1:26093232-26093251 MsG0180001727.01.T01:intron 30.0%
!! AGATTGACTATGAGTTTTGT+TGG - Chr1:26094409-26094428 None:intergenic 30.0%
!! GAGATTAGTTTATTGGTTCT+TGG + Chr1:26093239-26093258 MsG0180001727.01.T01:intron 30.0%
!! TCTTATTCAATGACTAGCTT+AGG + Chr1:26092944-26092963 MsG0180001727.01.T01:CDS 30.0%
!!! ATTACGTTGTTTTAGTGATG+TGG - Chr1:26094027-26094046 None:intergenic 30.0%
!!! ATTTCATTGGTTTTGCTAGT+TGG + Chr1:26096834-26096853 MsG0180001727.01.T01:intron 30.0%
!!! TTGTTTTAGTGATGTGGATT+GGG - Chr1:26094021-26094040 None:intergenic 30.0%
!!! TTTTACCAGTTTTAGAAAGC+TGG + Chr1:26094137-26094156 MsG0180001727.01.T01:intron 30.0%
AACAAATTCAAGTCCCACAT+CGG - Chr1:26096537-26096556 None:intergenic 35.0%
ACAATCGTATTGTCAAGCTT+GGG - Chr1:26093601-26093620 None:intergenic 35.0%
ACACATCCATTGGAATTCTT+TGG + Chr1:26093857-26093876 MsG0180001727.01.T01:intron 35.0%
AGAAACCACTCATGTGAAAA+TGG + Chr1:26095747-26095766 MsG0180001727.01.T01:intron 35.0%
ATAAGATTCAAGCAGAGTCA+AGG - Chr1:26093694-26093713 None:intergenic 35.0%
ATGTGAGTCTAAGAAGAAGT+TGG + Chr1:26095628-26095647 MsG0180001727.01.T01:CDS 35.0%
ATTTGGAAATCATACACAGG+CGG - Chr1:26096865-26096884 None:intergenic 35.0%
CAAAACTAGTTCATGCTCTT+AGG - Chr1:26093915-26093934 None:intergenic 35.0%
CGAAACAAGTGGAAGAAAAA+GGG + Chr1:26095871-26095890 MsG0180001727.01.T01:intron 35.0%
CTAACCTTGTATCTCATGAA+CGG - Chr1:26093754-26093773 None:intergenic 35.0%
CTACCTGAAGTCTTAACAAT+GGG + Chr1:26095718-26095737 MsG0180001727.01.T01:intron 35.0%
GAACATGGAGTAGTTGAAAA+TGG + Chr1:26092785-26092804 MsG0180001727.01.T01:CDS 35.0%
GAAGGAATCATTGCATAGAT+TGG - Chr1:26094433-26094452 None:intergenic 35.0%
GAGACCAAAAAAACCAAAAC+CGG + Chr1:26094184-26094203 MsG0180001727.01.T01:intron 35.0%
GATTAAGGGATTGTGACTTT+AGG + Chr1:26094770-26094789 MsG0180001727.01.T01:intron 35.0%
GATTCTTTGTGCCAAATTCA+TGG + Chr1:26095840-26095859 MsG0180001727.01.T01:intron 35.0%
GTTAAAGAATAGCGACTTGT+TGG - Chr1:26097168-26097187 None:intergenic 35.0%
TACCTGAAGTCTTAACAATG+GGG + Chr1:26095719-26095738 MsG0180001727.01.T01:intron 35.0%
TAGAAAAGAAGAAGAGCAAG+AGG + Chr1:26095490-26095509 MsG0180001727.01.T01:CDS 35.0%
TAGACTAGGGAAACAATGAT+AGG + Chr1:26094843-26094862 MsG0180001727.01.T01:intron 35.0%
TCAAAATCAGGTCAAAATCG+TGG - Chr1:26094210-26094229 None:intergenic 35.0%
TCTACCTGAAGTCTTAACAA+TGG + Chr1:26095717-26095736 MsG0180001727.01.T01:intron 35.0%
TGAACTCTCTTGAATACCAT+TGG + Chr1:26094502-26094521 MsG0180001727.01.T01:intron 35.0%
TGCTCTCATTGTTAAACCTT+TGG - Chr1:26095809-26095828 None:intergenic 35.0%
TGTCAAAGAACAAGGAAAAG+AGG - Chr1:26097190-26097209 None:intergenic 35.0%
TTCAACTACTCCATGTTCTT+TGG - Chr1:26092783-26092802 None:intergenic 35.0%
TTCAGAACAAAACTCAGACA+TGG + Chr1:26093301-26093320 MsG0180001727.01.T01:intron 35.0%
TTGATACGTATATCCATCTC+TGG - Chr1:26093989-26094008 None:intergenic 35.0%
! CATGTGTAGTATTTTGTGTG+TGG + Chr1:26096950-26096969 MsG0180001727.01.T01:intron 35.0%
! GTAAAAGTTGGTTCAAAAGG+TGG - Chr1:26094947-26094966 None:intergenic 35.0%
! TTCTTCTGCAAGCACTTTTA+TGG - Chr1:26093176-26093195 None:intergenic 35.0%
! TTTATGTGGTGGTCTTACAA+GGG + Chr1:26097057-26097076 MsG0180001727.01.T01:intron 35.0%
!! AACAGCTGATGCATTTTTAG+AGG + Chr1:26092862-26092881 MsG0180001727.01.T01:CDS 35.0%
!! AATCAAGATGAGAAGCATTG+AGG - Chr1:26093057-26093076 None:intergenic 35.0%
!! ACGATTTTGACCTGATTTTG+AGG + Chr1:26094209-26094228 MsG0180001727.01.T01:intron 35.0%
!! AGTTTCCAGCTTTCTAAAAC+TGG - Chr1:26094145-26094164 None:intergenic 35.0%
!! CCATGTTGTTTCTGAGTTAA+GGG + Chr1:26094322-26094341 MsG0180001727.01.T01:intron 35.0%
!! GGTCCCATTTTTCAAACATT+TGG - Chr1:26096882-26096901 None:intergenic 35.0%
!! GTTATTTCAAAACCGACTTG+TGG + Chr1:26096470-26096489 MsG0180001727.01.T01:intron 35.0%
!! TAGAAAAGTGCCGTAAAAGT+TGG - Chr1:26094959-26094978 None:intergenic 35.0%
!! TTTCATGACATGGTGTCATA+AGG + Chr1:26094080-26094099 MsG0180001727.01.T01:intron 35.0%
!!! AAGTTTTTGGCATCGTTTTC+AGG + Chr1:26095142-26095161 MsG0180001727.01.T01:intron 35.0%
!!! AGTTTTTGGCATCGTTTTCA+GGG + Chr1:26095143-26095162 MsG0180001727.01.T01:intron 35.0%
!!! GTTGTTTTAGTGATGTGGAT+TGG - Chr1:26094022-26094041 None:intergenic 35.0%
!!! TCTGAGTTTTGTTGCAATGT+GGG + Chr1:26095312-26095331 MsG0180001727.01.T01:intron 35.0%
!!! TGTTTTAGTGATGTGGATTG+GGG - Chr1:26094020-26094039 None:intergenic 35.0%
AAAAGAAGAAGAGCAAGAGG+TGG + Chr1:26095493-26095512 MsG0180001727.01.T01:CDS 40.0%
AAAGTCACGCACTATAGTAG+TGG - Chr1:26096911-26096930 None:intergenic 40.0%
AACAGTTTCACACATCACTG+AGG + Chr1:26093000-26093019 MsG0180001727.01.T01:CDS 40.0%
AACCCCATTGTTAAGACTTC+AGG - Chr1:26095724-26095743 None:intergenic 40.0%
AACTCAGACATGGAGAAAGA+AGG + Chr1:26093311-26093330 MsG0180001727.01.T01:intron 40.0%
AATCCACAAGTGAGGAATGT+TGG + Chr1:26095692-26095711 MsG0180001727.01.T01:CDS 40.0%
ACCACATAAAGTGGCATTTG+TGG - Chr1:26097047-26097066 None:intergenic 40.0%
ACTAATCTCTTGGAGTCACT+TGG - Chr1:26093228-26093247 None:intergenic 40.0%
AGTGCTTGCAGAAGAATTGA+AGG + Chr1:26093180-26093199 MsG0180001727.01.T01:CDS 40.0%
ATGACACCATGTCATGAAAG+AGG - Chr1:26094079-26094098 None:intergenic 40.0%
CACAATCGTATTGTCAAGCT+TGG - Chr1:26093602-26093621 None:intergenic 40.0%
CATGGAGTAGTTGAAAATGG+AGG + Chr1:26092788-26092807 MsG0180001727.01.T01:CDS 40.0%
CCCTTAACTCAGAAACAACA+TGG - Chr1:26094325-26094344 None:intergenic 40.0%
CTTAGTGTAGCCAAAGAACA+TGG + Chr1:26092770-26092789 MsG0180001727.01.T01:CDS 40.0%
GAGAAAGTTGAACTTCAGTG+TGG + Chr1:26095587-26095606 MsG0180001727.01.T01:CDS 40.0%
GAGCAGAAAAACACATCCAT+TGG + Chr1:26093847-26093866 MsG0180001727.01.T01:intron 40.0%
GCGAAACAAGTGGAAGAAAA+AGG + Chr1:26095870-26095889 MsG0180001727.01.T01:intron 40.0%
GGTTTGAAAAATCATGCACG+CGG - Chr1:26097002-26097021 None:intergenic 40.0%
GTAACGTAAAAATCGTGCCT+GGG - Chr1:26094284-26094303 None:intergenic 40.0%
GTTAGGGTGGAAAATATGAC+TGG - Chr1:26095909-26095928 None:intergenic 40.0%
GTTTGAAAAATCATGCACGC+GGG - Chr1:26097001-26097020 None:intergenic 40.0%
TAGAGATGTGTAGTGCTCTT+TGG + Chr1:26093774-26093793 MsG0180001727.01.T01:intron 40.0%
TCGCAGGAATTCCATGAATT+TGG - Chr1:26095854-26095873 None:intergenic 40.0%
TGGACACATATCCTTCTCTA+AGG + Chr1:26095767-26095786 MsG0180001727.01.T01:intron 40.0%
TGGGAGAGCTTAAATTCCAA+AGG + Chr1:26095790-26095809 MsG0180001727.01.T01:intron 40.0%
TGTAACGTAAAAATCGTGCC+TGG - Chr1:26094285-26094304 None:intergenic 40.0%
TGTAAGACCACCACATAAAG+TGG - Chr1:26097056-26097075 None:intergenic 40.0%
TGTTTGAAAAATGGGACCAC+TGG + Chr1:26096884-26096903 MsG0180001727.01.T01:intron 40.0%
! ACACATATCCTTCTCTAAGG+TGG + Chr1:26095770-26095789 MsG0180001727.01.T01:intron 40.0%
! AGAGTCTTATCTATCCGATG+TGG + Chr1:26096520-26096539 MsG0180001727.01.T01:intron 40.0%
! ATAAAATTTGGGGGTGCACA+AGG - Chr1:26095012-26095031 None:intergenic 40.0%
! CATATTTTCCACCCTAACAG+TGG + Chr1:26095911-26095930 MsG0180001727.01.T01:intron 40.0%
! CTTTATGTGGTGGTCTTACA+AGG + Chr1:26097056-26097075 MsG0180001727.01.T01:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + Chr1:26096521-26096540 MsG0180001727.01.T01:intron 40.0%
! GCCGTAAAAGTTGGTTCAAA+AGG - Chr1:26094950-26094969 None:intergenic 40.0%
! TAGTTCATGCTCTTAGGTTG+AGG - Chr1:26093909-26093928 None:intergenic 40.0%
! TGTATGAGCTCCGATTTTTG+TGG + Chr1:26095429-26095448 MsG0180001727.01.T01:intron 40.0%
! TGTGTCCATTTTCACATGAG+TGG - Chr1:26095755-26095774 None:intergenic 40.0%
! TTTTCTTCCACTTGTTTCGC+AGG - Chr1:26095870-26095889 None:intergenic 40.0%
!! ACAAATGCCACTTTATGTGG+TGG + Chr1:26097046-26097065 MsG0180001727.01.T01:intron 40.0%
!! ACCACAAATGCCACTTTATG+TGG + Chr1:26097043-26097062 MsG0180001727.01.T01:intron 40.0%
!! AGCGAAAATGAGCTGTTTTC+AGG + Chr1:26093819-26093838 MsG0180001727.01.T01:intron 40.0%
!! CACATATCCTTCTCTAAGGT+GGG + Chr1:26095771-26095790 MsG0180001727.01.T01:intron 40.0%
!! GATGAGAAGAGTTTGTTACG+CGG + Chr1:26097288-26097307 MsG0180001727.01.T01:CDS 40.0%
!! GCCATGTTGTTTCTGAGTTA+AGG + Chr1:26094321-26094340 MsG0180001727.01.T01:intron 40.0%
!! TCAATGACTAGCTTAGGCAT+TGG + Chr1:26092950-26092969 MsG0180001727.01.T01:CDS 40.0%
!!! AATGAGCTGTTTTCAGGTCA+TGG + Chr1:26093825-26093844 MsG0180001727.01.T01:intron 40.0%
!!! CTCTGAGTTTTGTTGCAATG+TGG + Chr1:26095311-26095330 MsG0180001727.01.T01:intron 40.0%
!!! CTGTTTTGGTCATGTTGCTT+TGG + Chr1:26093625-26093644 MsG0180001727.01.T01:intron 40.0%
!!! GCATTTTTGAAGCGAAGAAC+TGG + Chr1:26094368-26094387 MsG0180001727.01.T01:intron 40.0%
AATCAGGTCAAAATCGTGGC+CGG - Chr1:26094206-26094225 None:intergenic 45.0%
ACCATACCTCCTCCTTCTTT+CGG - Chr1:26097137-26097156 None:intergenic 45.0%
ACTGAGGAACATGGTCACAA+AGG + Chr1:26093016-26093035 MsG0180001727.01.T01:CDS 45.0%
AGACCAACATTCCTCACTTG+TGG - Chr1:26095698-26095717 None:intergenic 45.0%
AGAGGAGACAATCCACAAGT+CGG - Chr1:26096485-26096504 None:intergenic 45.0%
CTAGGTCAGATTCAAAGCTC+TGG - Chr1:26094644-26094663 None:intergenic 45.0%
CTGAGGAACATGGTCACAAA+GGG + Chr1:26093017-26093036 MsG0180001727.01.T01:CDS 45.0%
GAAATTAACAACGGTCCTCG+TGG + Chr1:26095062-26095081 MsG0180001727.01.T01:intron 45.0%
GCGTGATCTGTCAAAGAACA+AGG - Chr1:26097198-26097217 None:intergenic 45.0%
TAAGATGGAGACTGAGTGTC+AGG + Chr1:26095652-26095671 MsG0180001727.01.T01:CDS 45.0%
TCACACATCACTGAGGAACA+TGG + Chr1:26093007-26093026 MsG0180001727.01.T01:CDS 45.0%
TGACGCTTCAACCACTGTTA+GGG - Chr1:26095925-26095944 None:intergenic 45.0%
TGGAAGACAATCCACAAGTG+AGG + Chr1:26095684-26095703 MsG0180001727.01.T01:CDS 45.0%
TGGAATTCCTGCGAAACAAG+TGG + Chr1:26095860-26095879 MsG0180001727.01.T01:intron 45.0%
TGGTCCGTTCATGAGATACA+AGG + Chr1:26093747-26093766 MsG0180001727.01.T01:intron 45.0%
TTGACGCTTCAACCACTGTT+AGG - Chr1:26095926-26095945 None:intergenic 45.0%
! ACAATAGTGGTGCCGAAAGA+AGG + Chr1:26097122-26097141 MsG0180001727.01.T01:intron 45.0%
! CCAGAAAGCATGAAGAGCTT+GGG + Chr1:26092917-26092936 MsG0180001727.01.T01:CDS 45.0%
! CTTTGGAGATGCTCTCTTGT+CGG + Chr1:26097083-26097102 MsG0180001727.01.T01:intron 45.0%
! TCCAGAAAGCATGAAGAGCT+TGG + Chr1:26092916-26092935 MsG0180001727.01.T01:CDS 45.0%
!! CAGAGCTTTGAATCTGACCT+AGG + Chr1:26094642-26094661 MsG0180001727.01.T01:intron 45.0%
!! TTAGTGATGTGGATTGGGGT+GGG - Chr1:26094016-26094035 None:intergenic 45.0%
!! TTTAGTGATGTGGATTGGGG+TGG - Chr1:26094017-26094036 None:intergenic 45.0%
!!! GTGGCCGGTTTTGGTTTTTT+TGG - Chr1:26094191-26094210 None:intergenic 45.0%
!!! TGCCTGGGTTTTAGAAATCG+TGG - Chr1:26094269-26094288 None:intergenic 45.0%
!!! TCATTTTAAAATTTAAAATT+TGG + Chr1:26096302-26096321 MsG0180001727.01.T01:intron 5.0%
AAGCTCTCCCACCTTAGAGA+AGG - Chr1:26095781-26095800 None:intergenic 50.0%
AGGAACATGGTCACAAAGGG+TGG + Chr1:26093020-26093039 MsG0180001727.01.T01:CDS 50.0%
CCCAAGCTCTTCATGCTTTC+TGG - Chr1:26092920-26092939 None:intergenic 50.0%
TCAATACGGCTGCAAGTTCG+TGG + Chr1:26096559-26096578 MsG0180001727.01.T01:intron 50.0%
! ATAGTGGTGCCGAAAGAAGG+AGG + Chr1:26097125-26097144 MsG0180001727.01.T01:intron 50.0%
! CTTTTGTCGATGACACCGTC+GGG + Chr1:26097223-26097242 MsG0180001727.01.T01:CDS 50.0%
! GCTTTTGTCGATGACACCGT+CGG + Chr1:26097222-26097241 MsG0180001727.01.T01:CDS 50.0%
! TGGTCTTACAAGGGAGCCTT+TGG + Chr1:26097066-26097085 MsG0180001727.01.T01:intron 50.0%
! TTTTGTCGATGACACCGTCG+GGG + Chr1:26097224-26097243 MsG0180001727.01.T01:CDS 50.0%
!! CGACAAGAGAGCATCTCCAA+AGG - Chr1:26097085-26097104 None:intergenic 50.0%
!! GAGAAGAGTTTGTTACGCGG+TGG + Chr1:26097291-26097310 MsG0180001727.01.T01:CDS 50.0%
!! GCACTATAGTAGTGGACCAG+TGG - Chr1:26096903-26096922 None:intergenic 50.0%
!! GGCCACGATTTCTAAAACCC+AGG + Chr1:26094264-26094283 MsG0180001727.01.T01:intron 50.0%
!! GTCAAAATCGTGGCCGGTTT+TGG - Chr1:26094200-26094219 None:intergenic 50.0%
!!! GAGTTTTGTTGGTCTCCCAG+CGG - Chr1:26094398-26094417 None:intergenic 50.0%
AATACCCCCTCTCAAGCTGG+AGG + Chr1:26093557-26093576 MsG0180001727.01.T01:intron 55.0%
CGAAGAACTGGAGAACCGCT+GGG + Chr1:26094380-26094399 MsG0180001727.01.T01:intron 55.0%
CGCTTCAACCACTGTTAGGG+TGG - Chr1:26095922-26095941 None:intergenic 55.0%
GACTGAGTGTCAGGCTACTG+TGG + Chr1:26095661-26095680 MsG0180001727.01.T01:CDS 55.0%
GCCGAAAGAAGGAGGAGGTA+TGG + Chr1:26097133-26097152 MsG0180001727.01.T01:intron 55.0%
GCTAATACCCCCTCTCAAGC+TGG + Chr1:26093554-26093573 MsG0180001727.01.T01:intron 55.0%
TACCGACCTCCAGCTTGAGA+GGG - Chr1:26093566-26093585 None:intergenic 55.0%
TGAGTGTCAGGCTACTGTGG+TGG + Chr1:26095664-26095683 MsG0180001727.01.T01:CDS 55.0%
!! AGGGTGTCGGTGAGAAGTTG+CGG + Chr1:26097247-26097266 MsG0180001727.01.T01:CDS 55.0%
ACCGACCTCCAGCTTGAGAG+GGG - Chr1:26093565-26093584 None:intergenic 60.0%
CTACCGACCTCCAGCTTGAG+AGG - Chr1:26093567-26093586 None:intergenic 60.0%
GCGAAGAACTGGAGAACCGC+TGG + Chr1:26094379-26094398 MsG0180001727.01.T01:intron 60.0%
TGAGAAGTTGCGGCGGTGGT+TGG + Chr1:26097257-26097276 MsG0180001727.01.T01:CDS 60.0%
! GTGGTGCCGAAAGAAGGAGG+AGG + Chr1:26097128-26097147 MsG0180001727.01.T01:intron 60.0%
! GTGTCGGTGAGAAGTTGCGG+CGG + Chr1:26097250-26097269 MsG0180001727.01.T01:CDS 60.0%
CCCCCTCTCAAGCTGGAGGT+CGG + Chr1:26093561-26093580 MsG0180001727.01.T01:intron 65.0%
CCGACCTCCAGCTTGAGAGG+GGG - Chr1:26093564-26093583 None:intergenic 65.0%
GAAGTTGCGGCGGTGGTTGG+AGG + Chr1:26097260-26097279 MsG0180001727.01.T01:CDS 65.0%
GTCGATGACACCGTCGGGGA+GGG + Chr1:26097228-26097247 MsG0180001727.01.T01:CDS 65.0%
TCGGTGAGAAGTTGCGGCGG+TGG + Chr1:26097253-26097272 MsG0180001727.01.T01:CDS 65.0%
TGTCGATGACACCGTCGGGG+AGG + Chr1:26097227-26097246 MsG0180001727.01.T01:CDS 65.0%
CTCACCGACACCCTCCCCGA+CGG - Chr1:26097241-26097260 None:intergenic 70.0%
! GACACCGTCGGGGAGGGTGT+CGG + Chr1:26097234-26097253 MsG0180001727.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 26092737 26097356 26092737 ID=MsG0180001727.01;Name=MsG0180001727.01
Chr1 mRNA 26092737 26097356 26092737 ID=MsG0180001727.01.T01;Parent=MsG0180001727.01;Name=MsG0180001727.01.T01;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.33|1|1|3|0|283
Chr1 exon 26092737 26093211 26092737 ID=MsG0180001727.01.T01:exon:625;Parent=MsG0180001727.01.T01
Chr1 exon 26095483 26095713 26095483 ID=MsG0180001727.01.T01:exon:626;Parent=MsG0180001727.01.T01
Chr1 exon 26097211 26097356 26097211 ID=MsG0180001727.01.T01:exon:627;Parent=MsG0180001727.01.T01
Chr1 CDS 26092737 26093211 26092737 ID=MsG0180001727.01.T01:cds;Parent=MsG0180001727.01.T01
Chr1 CDS 26095483 26095713 26095483 ID=MsG0180001727.01.T01:cds;Parent=MsG0180001727.01.T01
Chr1 CDS 26097211 26097356 26097211 ID=MsG0180001727.01.T01:cds;Parent=MsG0180001727.01.T01
Gene Sequence

>MsG0180001727.01.T01

ATGGTAGTTGCAACTTTCACTGAAAGATATAGGCTTAGTGTAGCCAAAGAACATGGAGTAGTTGAAAATGGAGGATTAGTTCCATTGAGCATATTCATTTTACTCCCTCAATTTTTACTTATGGGAACAGCTGATGCATTTTTAGAGGTTGCTAAAATTGAGTTCTTCTATGATCAAGCTCCAGAAAGCATGAAGAGCTTGGGCACTTCTTATTCAATGACTAGCTTAGGCATTGGAAATTTTATTAGTACATTTCTTCTATCAACAGTTTCACACATCACTGAGGAACATGGTCACAAAGGGTGGATTTTGAATAACCTCAATGCTTCTCATCTTGATTACTACTATGCATTTTTGGCAATATTAAACATCTTGAACTTTATCTTCTTTTGTATTGTTACGAAGTATTATGTATATAGAGCTGAAATTTCAGATTCCATAAAAGTGCTTGCAGAAGAATTGAAGGAGAAGAAAAAAATTCATAGAAAAGAAGAAGAGCAAGAGGTGGTTAACATAGATTATAACTCTCAACTTCAAACTATTTTAGATGAATTCTTGAGGTCAAATCGAGTTTCATTTGAGAAAGTTGAACTTCAGTGTGGTGATCTTGTAGAGAAAGCATGTGAGTCTAAGAAGAAGTTGGTTAAGATGGAGACTGAGTGTCAGGCTACTGTGGTGGAAGACAATCCACAAGTGAGGAATGTTGATCACGCGTGTGCTTTTGTCGATGACACCGTCGGGGAGGGTGTCGGTGAGAAGTTGCGGCGGTGGTTGGAGGCGATTGATGAGAAGAGTTTGTTACGCGGTGGAAAGTCTTTGTGTGTGAAGTTGAGATTTAAAGTTGAGATTTGA
Protein sequence

>MsG0180001727.01.T01

MVVATFTERYRLSVAKEHGVVENGGLVPLSIFILLPQFLLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFISTFLLSTVSHITEEHGHKGWILNNLNASHLDYYYAFLAILNILNFIFFCIVTKYYVYRAEISDSIKVLAEELKEKKKIHRKEEEQEVVNIDYNSQLQTILDEFLRSNRVSFEKVELQCGDLVEKACESKKKLVKMETECQATVVEDNPQVRNVDHACAFVDDTVGEGVGEKLRRWLEAIDEKSLLRGGKSLCVKLRFKVEI*