Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036659.01.T01 | AFK46187.1 | 96.154 | 78 | 3 | 0 | 4 | 81 | 148 | 225 | 7.78E-46 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036659.01.T01 | F4JP46 | 83.333 | 78 | 13 | 0 | 4 | 81 | 251 | 328 | 1.79E-41 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036659.01.T01 | I3T0Z5 | 96.154 | 78 | 3 | 0 | 4 | 81 | 148 | 225 | 3.72e-46 | 156 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048065.01 | MsG0780036659.01 | 0.864384 | 1.264163e-64 | 3.961724e-61 |
| MsG0080048152.01 | MsG0780036659.01 | 0.872784 | 2.436586e-67 | 1.032537e-63 |
| MsG0080048307.01 | MsG0780036659.01 | 0.808570 | 2.902185e-50 | 1.665111e-47 |
| MsG0080048404.01 | MsG0780036659.01 | 0.827983 | 1.157142e-54 | 1.135078e-51 |
| MsG0080048463.01 | MsG0780036659.01 | 0.807997 | 3.844564e-50 | 2.172882e-47 |
| MsG0080048464.01 | MsG0780036659.01 | 0.816504 | 5.344876e-52 | 3.793953e-49 |
| MsG0080048683.01 | MsG0780036659.01 | 0.803013 | 4.268297e-49 | 2.121538e-46 |
| MsG0080048727.01 | MsG0780036659.01 | 0.839616 | 1.424283e-57 | 1.977617e-54 |
| MsG0080048773.01 | MsG0780036659.01 | 0.838444 | 2.866157e-57 | 3.839779e-54 |
| MsG0080048802.01 | MsG0780036659.01 | 0.821866 | 3.214632e-53 | 2.647188e-50 |
| MsG0080048826.01 | MsG0780036659.01 | 0.835645 | 1.487640e-56 | 1.830434e-53 |
| MsG0080048849.01 | MsG0780036659.01 | 0.856863 | 2.412722e-62 | 5.839378e-59 |
| MsG0080048865.01 | MsG0780036659.01 | 0.803186 | 3.930692e-49 | 1.962550e-46 |
| MsG0080048878.01 | MsG0780036659.01 | 0.872238 | 3.707263e-67 | 1.539924e-63 |
| MsG0080049002.01 | MsG0780036659.01 | 0.809263 | 2.062843e-50 | 1.205542e-47 |
| MsG0080049011.01 | MsG0780036659.01 | 0.820663 | 6.090058e-53 | 4.848559e-50 |
| MsG0080049040.01 | MsG0780036659.01 | 0.829596 | 4.713006e-55 | 4.845995e-52 |
| MsG0080049068.01 | MsG0780036659.01 | 0.858337 | 8.828812e-63 | 2.245594e-59 |
| MsG0080049069.01 | MsG0780036659.01 | 0.819950 | 8.872443e-53 | 6.926106e-50 |
| MsG0080049147.01 | MsG0780036659.01 | 0.810167 | 1.319004e-50 | 7.894235e-48 |
| MsG0180000026.01 | MsG0780036659.01 | 0.855212 | 7.339240e-62 | 1.681575e-58 |
| MsG0180000038.01 | MsG0780036659.01 | 0.813866 | 2.060572e-51 | 1.361332e-48 |
| MsG0180000113.01 | MsG0780036659.01 | 0.800697 | 1.276064e-48 | 5.980752e-46 |
| MsG0180000114.01 | MsG0780036659.01 | 0.817474 | 3.237204e-52 | 2.359947e-49 |
| MsG0180000129.01 | MsG0780036659.01 | 0.803077 | 4.139831e-49 | 2.061081e-46 |
| MsG0180000218.01 | MsG0780036659.01 | -0.827699 | 1.354656e-54 | 1.317666e-51 |
| MsG0180000354.01 | MsG0780036659.01 | 0.837277 | 5.715279e-57 | 7.386783e-54 |
| MsG0180000355.01 | MsG0780036659.01 | 0.873635 | 1.261918e-67 | 5.514720e-64 |
| MsG0180000404.01 | MsG0780036659.01 | 0.813475 | 2.511764e-51 | 1.641991e-48 |
| MsG0180000599.01 | MsG0780036659.01 | 0.810980 | 8.800005e-51 | 5.382518e-48 |
| MsG0180000624.01 | MsG0780036659.01 | 0.818370 | 2.031312e-52 | 1.517771e-49 |
| MsG0180000782.01 | MsG0780036659.01 | 0.810013 | 1.423305e-50 | 8.484960e-48 |
| MsG0180000784.01 | MsG0780036659.01 | 0.805899 | 1.068308e-49 | 5.719340e-47 |
| MsG0180000785.01 | MsG0780036659.01 | 0.834175 | 3.488997e-56 | 4.107364e-53 |
| MsG0180000787.01 | MsG0780036659.01 | 0.803597 | 3.230894e-49 | 1.630318e-46 |
| MsG0180000835.01 | MsG0780036659.01 | 0.836539 | 8.819812e-57 | 1.114810e-53 |
| MsG0180001085.01 | MsG0780036659.01 | 0.812571 | 3.965791e-51 | 2.530351e-48 |
| MsG0180001088.01 | MsG0780036659.01 | 0.808990 | 2.360575e-50 | 1.369429e-47 |
| MsG0180001100.01 | MsG0780036659.01 | 0.822753 | 2.000828e-53 | 1.689878e-50 |
| MsG0180001105.01 | MsG0780036659.01 | 0.821123 | 4.773636e-53 | 3.849830e-50 |
| MsG0180001118.01 | MsG0780036659.01 | 0.801811 | 7.550504e-49 | 3.640075e-46 |
| MsG0180001270.01 | MsG0780036659.01 | 0.801152 | 1.030263e-48 | 4.885001e-46 |
| MsG0180001285.01 | MsG0780036659.01 | 0.808593 | 2.869676e-50 | 1.647427e-47 |
| MsG0180001356.01 | MsG0780036659.01 | 0.815203 | 1.042647e-51 | 7.141950e-49 |
| MsG0180001610.01 | MsG0780036659.01 | 0.849970 | 2.296280e-60 | 4.429698e-57 |
| MsG0180001727.01 | MsG0780036659.01 | 0.802343 | 5.869212e-49 | 2.868141e-46 |
| MsG0180002399.01 | MsG0780036659.01 | 0.826396 | 2.775502e-54 | 2.599844e-51 |
| MsG0180002547.01 | MsG0780036659.01 | 0.801623 | 8.251090e-49 | 3.958696e-46 |
| MsG0180002664.01 | MsG0780036659.01 | 0.803360 | 3.618327e-49 | 1.814549e-46 |
| MsG0180002700.01 | MsG0780036659.01 | 0.834210 | 3.419657e-56 | 4.030186e-53 |
| MsG0180002794.01 | MsG0780036659.01 | 0.821929 | 3.109417e-53 | 2.565021e-50 |
| MsG0180003189.01 | MsG0780036659.01 | 0.800019 | 1.754094e-48 | 8.081024e-46 |
| MsG0180003353.01 | MsG0780036659.01 | 0.894332 | 2.725276e-75 | 2.697413e-71 |
| MsG0180003493.01 | MsG0780036659.01 | 0.804291 | 2.317778e-49 | 1.190561e-46 |
| MsG0180003697.01 | MsG0780036659.01 | 0.808055 | 3.737051e-50 | 2.115264e-47 |
| MsG0180003741.01 | MsG0780036659.01 | 0.806118 | 9.607486e-50 | 5.172367e-47 |
| MsG0180003767.01 | MsG0780036659.01 | -0.818578 | 1.821573e-52 | 1.368772e-49 |
| MsG0180003821.01 | MsG0780036659.01 | 0.889024 | 3.506905e-73 | 2.782223e-69 |
| MsG0180003885.01 | MsG0780036659.01 | 0.890458 | 9.672280e-74 | 8.137368e-70 |
| MsG0180003922.01 | MsG0780036659.01 | 0.825160 | 5.454988e-54 | 4.933195e-51 |
| MsG0180003932.01 | MsG0780036659.01 | 0.820632 | 6.190211e-53 | 4.923947e-50 |
| MsG0180003951.01 | MsG0780036659.01 | 0.803442 | 3.479578e-49 | 1.748731e-46 |
| MsG0180004025.01 | MsG0780036659.01 | 0.805171 | 1.518096e-49 | 7.976800e-47 |
| MsG0180004046.01 | MsG0780036659.01 | 0.864709 | 1.000159e-64 | 3.170648e-61 |
| MsG0180004062.01 | MsG0780036659.01 | 0.838474 | 2.815551e-57 | 3.775293e-54 |
| MsG0180004103.01 | MsG0780036659.01 | 0.847080 | 1.450164e-59 | 2.548400e-56 |
| MsG0180004192.01 | MsG0780036659.01 | 0.819035 | 1.435042e-52 | 1.092090e-49 |
| MsG0180004246.01 | MsG0780036659.01 | 0.843837 | 1.095690e-58 | 1.735977e-55 |
| MsG0180004276.01 | MsG0780036659.01 | 0.813919 | 2.005482e-51 | 1.326830e-48 |
| MsG0180004390.01 | MsG0780036659.01 | 0.802686 | 4.986875e-49 | 2.458302e-46 |
| MsG0180004428.01 | MsG0780036659.01 | 0.821307 | 4.329676e-53 | 3.509573e-50 |
| MsG0180004448.01 | MsG0780036659.01 | 0.838649 | 2.536465e-57 | 3.419501e-54 |
| MsG0180004466.01 | MsG0780036659.01 | 0.855841 | 4.812521e-62 | 1.126058e-58 |
| MsG0180004493.01 | MsG0780036659.01 | 0.894723 | 1.885439e-75 | 1.897349e-71 |
| MsG0180004500.01 | MsG0780036659.01 | 0.855346 | 6.709608e-62 | 1.544596e-58 |
| MsG0180004605.01 | MsG0780036659.01 | -0.839335 | 1.685459e-57 | 2.320265e-54 |
| MsG0180004725.01 | MsG0780036659.01 | 0.800498 | 1.401033e-48 | 6.533517e-46 |
| MsG0180004750.01 | MsG0780036659.01 | 0.823734 | 1.181128e-53 | 1.025696e-50 |
| MsG0180004759.01 | MsG0780036659.01 | -0.830119 | 3.513321e-55 | 3.667562e-52 |
| MsG0180004765.01 | MsG0780036659.01 | 0.814856 | 1.245179e-51 | 8.449490e-49 |
| MsG0180004814.01 | MsG0780036659.01 | 0.823357 | 1.446974e-53 | 1.242924e-50 |
| MsG0180005153.01 | MsG0780036659.01 | 0.836043 | 1.178903e-56 | 1.468141e-53 |
| MsG0180005169.01 | MsG0780036659.01 | 0.868498 | 6.246215e-66 | 2.264369e-62 |
| MsG0180005205.01 | MsG0780036659.01 | 0.810412 | 1.167750e-50 | 7.034007e-48 |
| MsG0180005240.01 | MsG0780036659.01 | 0.811858 | 5.673872e-51 | 3.551289e-48 |
| MsG0180005418.01 | MsG0780036659.01 | 0.800438 | 1.441339e-48 | 6.711359e-46 |
| MsG0180005509.01 | MsG0780036659.01 | 0.828792 | 7.381783e-55 | 7.412788e-52 |
| MsG0180005807.01 | MsG0780036659.01 | 0.839578 | 1.457109e-57 | 2.020822e-54 |
| MsG0180005913.01 | MsG0780036659.01 | 0.823590 | 1.276217e-53 | 1.103603e-50 |
| MsG0180006004.01 | MsG0780036659.01 | 0.802229 | 6.194301e-49 | 3.018139e-46 |
| MsG0180006017.01 | MsG0780036659.01 | 0.840513 | 8.313550e-58 | 1.186995e-54 |
| MsG0180006031.01 | MsG0780036659.01 | 0.874237 | 7.899672e-68 | 3.529661e-64 |
| MsG0180006096.01 | MsG0780036659.01 | 0.871132 | 8.626878e-67 | 3.440929e-63 |
| MsG0180006104.01 | MsG0780036659.01 | 0.847187 | 1.355345e-59 | 2.389761e-56 |
| MsG0280006306.01 | MsG0780036659.01 | -0.846804 | 1.725462e-59 | 3.005346e-56 |
| MsG0280006309.01 | MsG0780036659.01 | 0.843252 | 1.570708e-58 | 2.443105e-55 |
| MsG0280006418.01 | MsG0780036659.01 | -0.803011 | 4.272808e-49 | 2.123665e-46 |
| MsG0280010564.01 | MsG0780036659.01 | 0.854460 | 1.213331e-61 | 2.711548e-58 |
| MsG0280010736.01 | MsG0780036659.01 | 0.810107 | 1.358584e-50 | 8.118849e-48 |
| MsG0280010753.01 | MsG0780036659.01 | 0.808614 | 2.840030e-50 | 1.631258e-47 |
| MsG0280010916.01 | MsG0780036659.01 | 0.841849 | 3.702144e-58 | 5.510168e-55 |
| MsG0280011027.01 | MsG0780036659.01 | 0.842687 | 2.221335e-58 | 3.394171e-55 |
| MsG0280011073.01 | MsG0780036659.01 | 0.827113 | 1.871788e-54 | 1.789899e-51 |
| MsG0280011255.01 | MsG0780036659.01 | 0.859128 | 5.122370e-63 | 1.338286e-59 |
| MsG0280011304.01 | MsG0780036659.01 | 0.801145 | 1.033508e-48 | 4.899504e-46 |
| MsG0280011333.01 | MsG0780036659.01 | 0.856172 | 3.850311e-62 | 9.107711e-59 |
| MsG0280011339.01 | MsG0780036659.01 | 0.804626 | 1.973965e-49 | 1.022697e-46 |
| MsG0280011371.01 | MsG0780036659.01 | 0.812918 | 3.328414e-51 | 2.143125e-48 |
| MsG0380011516.01 | MsG0780036659.01 | 0.804563 | 2.034644e-49 | 1.052429e-46 |
| MsG0380011581.01 | MsG0780036659.01 | 0.852089 | 5.803000e-61 | 1.199217e-57 |
| MsG0380011669.01 | MsG0780036659.01 | 0.801572 | 8.453614e-49 | 4.050734e-46 |
| MsG0380011844.01 | MsG0780036659.01 | 0.832376 | 9.792683e-56 | 1.092525e-52 |
| MsG0380012005.01 | MsG0780036659.01 | 0.828768 | 7.482737e-55 | 7.508521e-52 |
| MsG0380012011.01 | MsG0780036659.01 | 0.820606 | 6.276485e-53 | 4.989058e-50 |
| MsG0380012012.01 | MsG0780036659.01 | 0.842381 | 2.676786e-58 | 4.051710e-55 |
| MsG0380012067.01 | MsG0780036659.01 | 0.802519 | 5.397388e-49 | 2.649280e-46 |
| MsG0380012122.01 | MsG0780036659.01 | 0.851078 | 1.121325e-60 | 2.243091e-57 |
| MsG0380012374.01 | MsG0780036659.01 | 0.803257 | 3.799799e-49 | 1.900614e-46 |
| MsG0380012394.01 | MsG0780036659.01 | 0.821641 | 3.625079e-53 | 2.965960e-50 |
| MsG0380012567.01 | MsG0780036659.01 | 0.824583 | 7.463509e-54 | 6.638952e-51 |
| MsG0380012570.01 | MsG0780036659.01 | 0.825265 | 5.150042e-54 | 4.671238e-51 |
| MsG0380013085.01 | MsG0780036659.01 | 0.842421 | 2.613018e-58 | 3.960196e-55 |
| MsG0380013183.01 | MsG0780036659.01 | 0.825941 | 3.562013e-54 | 3.293771e-51 |
| MsG0380013295.01 | MsG0780036659.01 | -0.840854 | 6.765794e-58 | 9.763185e-55 |
| MsG0380014175.01 | MsG0780036659.01 | 0.800062 | 1.718681e-48 | 7.926704e-46 |
| MsG0380014225.01 | MsG0780036659.01 | -0.820424 | 6.911323e-53 | 5.466679e-50 |
| MsG0380014706.01 | MsG0780036659.01 | 0.810100 | 1.362997e-50 | 8.143784e-48 |
| MsG0380014875.01 | MsG0780036659.01 | 0.810239 | 1.272269e-50 | 7.629055e-48 |
| MsG0380014876.01 | MsG0780036659.01 | 0.801304 | 9.591414e-49 | 4.565082e-46 |
| MsG0380014909.01 | MsG0780036659.01 | 0.805063 | 1.599134e-49 | 8.379325e-47 |
| MsG0680030784.01 | MsG0780036659.01 | 0.824412 | 8.187956e-54 | 7.246540e-51 |
| MsG0680030858.01 | MsG0780036659.01 | 0.820960 | 5.204055e-53 | 4.178282e-50 |
| MsG0680030880.01 | MsG0780036659.01 | 0.819200 | 1.315593e-52 | 1.005696e-49 |
| MsG0680030992.01 | MsG0780036659.01 | 0.810919 | 9.070267e-51 | 5.538605e-48 |
| MsG0680031000.01 | MsG0780036659.01 | 0.831208 | 1.900977e-55 | 2.048787e-52 |
| MsG0680031010.01 | MsG0780036659.01 | 0.841259 | 5.296241e-58 | 7.738116e-55 |
| MsG0680031264.01 | MsG0780036659.01 | 0.826337 | 2.867875e-54 | 2.681859e-51 |
| MsG0680031344.01 | MsG0780036659.01 | 0.814251 | 1.694149e-51 | 1.131015e-48 |
| MsG0680031349.01 | MsG0780036659.01 | 0.804994 | 1.653255e-49 | 8.647467e-47 |
| MsG0680031468.01 | MsG0780036659.01 | 0.812254 | 4.650992e-51 | 2.942672e-48 |
| MsG0680031469.01 | MsG0780036659.01 | 0.815221 | 1.032933e-51 | 7.078853e-49 |
| MsG0680031621.01 | MsG0780036659.01 | 0.836655 | 8.241860e-57 | 1.045291e-53 |
| MsG0680031640.01 | MsG0780036659.01 | 0.816420 | 5.580679e-52 | 3.952332e-49 |
| MsG0680031708.01 | MsG0780036659.01 | 0.802328 | 5.911762e-49 | 2.887899e-46 |
| MsG0680031939.01 | MsG0780036659.01 | 0.862464 | 4.975918e-64 | 1.458623e-60 |
| MsG0680032771.01 | MsG0780036659.01 | 0.810840 | 9.435914e-51 | 5.749460e-48 |
| MsG0680032827.01 | MsG0780036659.01 | 0.849395 | 3.324601e-60 | 6.293733e-57 |
| MsG0680032830.01 | MsG0780036659.01 | 0.865736 | 4.757338e-65 | 1.564479e-61 |
| MsG0680032832.01 | MsG0780036659.01 | 0.829308 | 5.536501e-55 | 5.645940e-52 |
| MsG0680033377.01 | MsG0780036659.01 | 0.875342 | 3.323064e-68 | 1.545843e-64 |
| MsG0680033459.01 | MsG0780036659.01 | 0.805217 | 1.484966e-49 | 7.811752e-47 |
| MsG0680033465.01 | MsG0780036659.01 | 0.827470 | 1.537096e-54 | 1.485367e-51 |
| MsG0680034064.01 | MsG0780036659.01 | 0.817787 | 2.750738e-52 | 2.022555e-49 |
| MsG0680034230.01 | MsG0780036659.01 | 0.824574 | 7.498959e-54 | 6.668749e-51 |
| MsG0680034235.01 | MsG0780036659.01 | 0.839184 | 1.844296e-57 | 2.527106e-54 |
| MsG0680034766.01 | MsG0780036659.01 | 0.804428 | 2.170643e-49 | 1.118867e-46 |
| MsG0680034767.01 | MsG0780036659.01 | 0.840134 | 1.044241e-57 | 1.473579e-54 |
| MsG0680035307.01 | MsG0780036659.01 | 0.807751 | 4.337765e-50 | 2.435821e-47 |
| MsG0480018584.01 | MsG0780036659.01 | 0.883100 | 5.968004e-71 | 3.732109e-67 |
| MsG0480018653.01 | MsG0780036659.01 | 0.819798 | 9.612147e-53 | 7.471994e-50 |
| MsG0480018850.01 | MsG0780036659.01 | 0.868135 | 8.176274e-66 | 2.925780e-62 |
| MsG0480018911.01 | MsG0780036659.01 | 0.902177 | 1.264864e-78 | 1.769392e-74 |
| MsG0480018985.01 | MsG0780036659.01 | 0.809878 | 1.521831e-50 | 9.039924e-48 |
| MsG0480019007.01 | MsG0780036659.01 | 0.885252 | 9.546975e-72 | 6.506196e-68 |
| MsG0480019148.01 | MsG0780036659.01 | 0.843608 | 1.261873e-58 | 1.985064e-55 |
| MsG0480019206.01 | MsG0780036659.01 | 0.812424 | 4.270542e-51 | 2.714394e-48 |
| MsG0480019408.01 | MsG0780036659.01 | 0.826694 | 2.357579e-54 | 2.227098e-51 |
| MsG0480019711.01 | MsG0780036659.01 | 0.858185 | 9.795926e-63 | 2.479040e-59 |
| MsG0480020024.01 | MsG0780036659.01 | 0.873413 | 1.499468e-67 | 6.502097e-64 |
| MsG0480020025.01 | MsG0780036659.01 | 0.854806 | 9.632700e-62 | 2.177871e-58 |
| MsG0480020690.01 | MsG0780036659.01 | 0.868394 | 6.745593e-66 | 2.436024e-62 |
| MsG0480020788.01 | MsG0780036659.01 | 0.823809 | 1.133821e-53 | 9.866372e-51 |
| MsG0480020887.01 | MsG0780036659.01 | 0.814626 | 1.399814e-51 | 9.440495e-49 |
| MsG0480020889.01 | MsG0780036659.01 | 0.831644 | 1.485558e-55 | 1.621989e-52 |
| MsG0480020890.01 | MsG0780036659.01 | 0.813494 | 2.488108e-51 | 1.627398e-48 |
| MsG0480020935.01 | MsG0780036659.01 | -0.830516 | 2.810448e-55 | 2.967635e-52 |
| MsG0480021037.01 | MsG0780036659.01 | 0.837259 | 5.774973e-57 | 7.459752e-54 |
| MsG0480021056.01 | MsG0780036659.01 | 0.837544 | 4.881946e-57 | 6.362276e-54 |
| MsG0480021160.01 | MsG0780036659.01 | 0.808342 | 3.245869e-50 | 1.851359e-47 |
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| MsG0780036659.01 | MsG0880047422.01 | -0.836300 | 1.014729e-56 | 1.273693e-53 |
| MsG0780036659.01 | MsG0880047481.01 | -0.812214 | 4.744470e-51 | 2.998609e-48 |
| MsG0780036659.01 | MsG0880047538.01 | 0.876134 | 1.777325e-68 | 8.520194e-65 |
| MsG0780036659.01 | MsG0880047656.01 | 0.803766 | 2.980951e-49 | 1.510677e-46 |
| MsG0780036659.01 | MsG0880047657.01 | 0.804264 | 2.347976e-49 | 1.205202e-46 |
| MsG0780036659.01 | MsG0880047696.01 | 0.871653 | 5.800836e-67 | 2.358382e-63 |
| MsG0780036659.01 | MsG0880047703.01 | 0.867028 | 1.851059e-65 | 6.368811e-62 |
| MsG0780036659.01 | MsG0880047754.01 | 0.869509 | 2.936441e-66 | 1.105062e-62 |
| MsG0780036659.01 | MsG0880047764.01 | 0.818780 | 1.639470e-52 | 1.238864e-49 |
| MsG0780036659.01 | MsG0880047770.01 | 0.811452 | 6.951474e-51 | 4.304669e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036659.01.T01 | MTR_7g016670 | 96.154 | 78 | 3 | 0 | 4 | 81 | 247 | 324 | 1.67e-48 | 155 |
| MsG0780036659.01.T01 | MTR_5g012850 | 80.000 | 80 | 16 | 0 | 2 | 81 | 270 | 349 | 4.90e-41 | 137 |
| MsG0780036659.01.T01 | MTR_5g012850 | 74.286 | 35 | 9 | 0 | 2 | 36 | 270 | 304 | 8.65e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036659.01.T01 | AT4G17360 | 83.333 | 78 | 13 | 0 | 4 | 81 | 251 | 328 | 1.82e-42 | 140 |
| MsG0780036659.01.T01 | AT5G47435 | 83.333 | 78 | 13 | 0 | 4 | 81 | 246 | 323 | 2.16e-42 | 140 |
| MsG0780036659.01.T01 | AT5G47435 | 83.333 | 78 | 13 | 0 | 4 | 81 | 246 | 323 | 2.16e-42 | 140 |
Find 27 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAATGTACACAAATATT+TGG | 0.127201 | 7:-11477915 | MsG0780036659.01.T01:three_prime_UTR |
| TTCACCATTTGTTCAATTAT+TGG | 0.177833 | 7:+11479196 | None:intergenic |
| CATAATGTACACAAATATTT+GGG | 0.260083 | 7:-11477914 | MsG0780036659.01.T01:three_prime_UTR |
| GAGGCTGGTGTGAAATTAAT+TGG | 0.276061 | 7:-11479259 | MsG0780036659.01.T01:CDS |
| TTGTTGCAGCTAACATAAAA+TGG | 0.277800 | 7:+11477842 | None:intergenic |
| ATAACTTAACTTCATTCGTT+TGG | 0.370328 | 7:-11477808 | MsG0780036659.01.T01:three_prime_UTR |
| ATATTTGTGTACATTATGTT+TGG | 0.372293 | 7:+11477919 | None:intergenic |
| TATCGTAAGGGCATTGGATG+TGG | 0.381151 | 7:-11477781 | MsG0780036659.01.T01:three_prime_UTR |
| ACAGTCTTCTTTACCTCATA+AGG | 0.386943 | 7:+11477968 | None:intergenic |
| TAGATCCTATTGTGAACTTC+GGG | 0.387384 | 7:-11477996 | MsG0780036659.01.T01:CDS |
| GGTGACCTGGGTTCGAACTA+TGG | 0.391286 | 7:+11477755 | None:intergenic |
| TTCGTTTGGTTCTTATCGTA+AGG | 0.394008 | 7:-11477794 | MsG0780036659.01.T01:three_prime_UTR |
| CGGACCAATAATTGAACAAA+TGG | 0.444593 | 7:-11479200 | MsG0780036659.01.T01:intron |
| TAATACCCGAAGTTCACAAT+AGG | 0.456580 | 7:+11477991 | None:intergenic |
| ATCGTAAGGGCATTGGATGT+GGG | 0.457308 | 7:-11477780 | MsG0780036659.01.T01:three_prime_UTR |
| ACTTCGGGTATTACCTTATG+AGG | 0.458749 | 7:-11477981 | MsG0780036659.01.T01:CDS |
| GGTTCTTATCGTAAGGGCAT+TGG | 0.467165 | 7:-11477787 | MsG0780036659.01.T01:three_prime_UTR |
| ACAATAGGATCTAATAGCCT+TGG | 0.491868 | 7:+11478006 | None:intergenic |
| TTAGATCCTATTGTGAACTT+CGG | 0.497060 | 7:-11477997 | MsG0780036659.01.T01:CDS |
| TGGAAAGACATTGTTTCTCA+AGG | 0.521459 | 7:+11478026 | None:intergenic |
| TCGTTTGGTTCTTATCGTAA+GGG | 0.532073 | 7:-11477793 | MsG0780036659.01.T01:three_prime_UTR |
| TGAGAAACAATGTCTTTCCA+AGG | 0.572364 | 7:-11478023 | MsG0780036659.01.T01:CDS |
| AAAGGGAAATGTGGTGACCT+GGG | 0.582465 | 7:+11477743 | None:intergenic |
| TCGTAAGGGCATTGGATGTG+GGG | 0.595015 | 7:-11477779 | MsG0780036659.01.T01:three_prime_UTR |
| ATAATGTACACAAATATTTG+GGG | 0.667804 | 7:-11477913 | MsG0780036659.01.T01:three_prime_UTR |
| GGGGTCCATAGTTCGAACCC+AGG | 0.689018 | 7:-11477760 | MsG0780036659.01.T01:three_prime_UTR |
| GTGAGCGAAGAACTTGACAG+CGG | 0.735138 | 7:-11479220 | MsG0780036659.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATTATATTATTTAAAG+TGG | - | Chr7:11477970-11477989 | MsG0780036659.01.T01:CDS | 10.0% |
| !!! | ATTTTTCTTAAGCAAAAATT+GGG | - | Chr7:11477941-11477960 | MsG0780036659.01.T01:exon | 15.0% |
| !! | ACATAATGTACACAAATATT+TGG | - | Chr7:11479120-11479139 | MsG0780036659.01.T01:intron | 20.0% |
| !! | ATAATGTACACAAATATTTG+GGG | - | Chr7:11479122-11479141 | MsG0780036659.01.T01:intron | 20.0% |
| !! | ATATTTGTGTACATTATGTT+TGG | + | Chr7:11479119-11479138 | None:intergenic | 20.0% |
| !! | CATAATGTACACAAATATTT+GGG | - | Chr7:11479121-11479140 | MsG0780036659.01.T01:intron | 20.0% |
| !!! | GATTTTTCTTAAGCAAAAAT+TGG | - | Chr7:11477940-11477959 | MsG0780036659.01.T01:exon | 20.0% |
| !!! | TAGGACTCAAAATATATTTT+TGG | + | Chr7:11478175-11478194 | None:intergenic | 20.0% |
| ! | ATAACTTAACTTCATTCGTT+TGG | - | Chr7:11479227-11479246 | MsG0780036659.01.T01:CDS | 25.0% |
| ! | CATACTATCTTAATCTGTAT+AGG | + | Chr7:11478343-11478362 | None:intergenic | 25.0% |
| ! | CTATAGCTTATAAGATATCA+TGG | + | Chr7:11478750-11478769 | None:intergenic | 25.0% |
| ! | TATATATTCCTAGTATGCTA+AGG | + | Chr7:11478094-11478113 | None:intergenic | 25.0% |
| ! | TTCACCATTTGTTCAATTAT+TGG | + | Chr7:11477842-11477861 | None:intergenic | 25.0% |
| !! | ATTTTTCTATACATGCTTCA+TGG | - | Chr7:11477867-11477886 | MsG0780036659.01.T01:three_prime_UTR | 25.0% |
| AACATTATCAATGTCCTGAA+GGG | + | Chr7:11478043-11478062 | None:intergenic | 30.0% | |
| ATCAAGCATTTGAACAATAC+AGG | + | Chr7:11478636-11478655 | None:intergenic | 30.0% | |
| ATCTTACAATTGTCTCAAAG+GGG | - | Chr7:11478004-11478023 | MsG0780036659.01.T01:CDS | 30.0% | |
| CATCTTACAATTGTCTCAAA+GGG | - | Chr7:11478003-11478022 | MsG0780036659.01.T01:CDS | 30.0% | |
| CTGTCAAATAGTCTAAATTG+TGG | - | Chr7:11478883-11478902 | MsG0780036659.01.T01:intron | 30.0% | |
| CTTAAGCAAAAATTGGGAAA+AGG | - | Chr7:11477947-11477966 | MsG0780036659.01.T01:exon | 30.0% | |
| CTTGATATATCCTATTCGTA+GGG | - | Chr7:11478650-11478669 | MsG0780036659.01.T01:intron | 30.0% | |
| GATATATACCTTAGCATACT+AGG | - | Chr7:11478083-11478102 | MsG0780036659.01.T01:CDS | 30.0% | |
| GCTTGATACTATTTATGTGA+GGG | - | Chr7:11478905-11478924 | MsG0780036659.01.T01:intron | 30.0% | |
| TTAGATCCTATTGTGAACTT+CGG | - | Chr7:11479038-11479057 | MsG0780036659.01.T01:intron | 30.0% | |
| TTGTTGCAGCTAACATAAAA+TGG | + | Chr7:11479196-11479215 | None:intergenic | 30.0% | |
| !! | GAAGACTGTTGTATTTTAAG+TGG | - | Chr7:11479081-11479100 | MsG0780036659.01.T01:intron | 30.0% |
| ACAATAGGATCTAATAGCCT+TGG | + | Chr7:11479032-11479051 | None:intergenic | 35.0% | |
| ACAGTCTTCTTTACCTCATA+AGG | + | Chr7:11479070-11479089 | None:intergenic | 35.0% | |
| ACATTATCAATGTCCTGAAG+GGG | + | Chr7:11478042-11478061 | None:intergenic | 35.0% | |
| AGAAGAACCTATGCATACTA+GGG | + | Chr7:11478388-11478407 | None:intergenic | 35.0% | |
| CAACATTATCAATGTCCTGA+AGG | + | Chr7:11478044-11478063 | None:intergenic | 35.0% | |
| CGGACCAATAATTGAACAAA+TGG | - | Chr7:11477835-11477854 | MsG0780036659.01.T01:three_prime_UTR | 35.0% | |
| CTATTTATGTGAGGGTAACA+TGG | - | Chr7:11478913-11478932 | MsG0780036659.01.T01:intron | 35.0% | |
| GCATCTTACAATTGTCTCAA+AGG | - | Chr7:11478002-11478021 | MsG0780036659.01.T01:CDS | 35.0% | |
| GCTTGATATATCCTATTCGT+AGG | - | Chr7:11478649-11478668 | MsG0780036659.01.T01:intron | 35.0% | |
| GGCTTGATACTATTTATGTG+AGG | - | Chr7:11478904-11478923 | MsG0780036659.01.T01:intron | 35.0% | |
| TAATACCCGAAGTTCACAAT+AGG | + | Chr7:11479047-11479066 | None:intergenic | 35.0% | |
| TAGATCCTATTGTGAACTTC+GGG | - | Chr7:11479039-11479058 | MsG0780036659.01.T01:intron | 35.0% | |
| TCATTCACATCTTATTGCCA+AGG | + | Chr7:11477913-11477932 | None:intergenic | 35.0% | |
| TGAGAAACAATGTCTTTCCA+AGG | - | Chr7:11479012-11479031 | MsG0780036659.01.T01:intron | 35.0% | |
| TGTTGATCTGAATTGAGCAT+AGG | - | Chr7:11478059-11478078 | MsG0780036659.01.T01:CDS | 35.0% | |
| ! | TGGAAAGACATTGTTTCTCA+AGG | + | Chr7:11479012-11479031 | None:intergenic | 35.0% |
| ! | TTATATATGTGGGTTGCATG+AGG | - | Chr7:11478469-11478488 | MsG0780036659.01.T01:intron | 35.0% |
| !! | ACTTTTGTTTGATGTGTTGC+TGG | - | Chr7:11478589-11478608 | MsG0780036659.01.T01:intron | 35.0% |
| !! | TCGTTTGGTTCTTATCGTAA+GGG | - | Chr7:11479242-11479261 | MsG0780036659.01.T01:CDS | 35.0% |
| !! | TTCGTTTGGTTCTTATCGTA+AGG | - | Chr7:11479241-11479260 | MsG0780036659.01.T01:CDS | 35.0% |
| !!! | ATATTTTTGGATGCTTGCAC+TGG | + | Chr7:11478162-11478181 | None:intergenic | 35.0% |
| ACCCACATATATAAGTCGCT+AGG | + | Chr7:11478463-11478482 | None:intergenic | 40.0% | |
| ACTTCGGGTATTACCTTATG+AGG | - | Chr7:11479054-11479073 | MsG0780036659.01.T01:intron | 40.0% | |
| ATCTTATTGCCAAGGAAGCA+AGG | + | Chr7:11477905-11477924 | None:intergenic | 40.0% | |
| CAAGGGATAATGCAAATGAG+AGG | - | Chr7:11478492-11478511 | MsG0780036659.01.T01:intron | 40.0% | |
| CACATATATAAGTCGCTAGG+CGG | + | Chr7:11478460-11478479 | None:intergenic | 40.0% | |
| GAGAAGAACCTATGCATACT+AGG | + | Chr7:11478389-11478408 | None:intergenic | 40.0% | |
| GAGGCTGGTGTGAAATTAAT+TGG | - | Chr7:11477776-11477795 | MsG0780036659.01.T01:three_prime_UTR | 40.0% | |
| GCCTAGCGACTTATATATGT+GGG | - | Chr7:11478459-11478478 | MsG0780036659.01.T01:intron | 40.0% | |
| AGAGGAACCTGTGCATACTA+GGG | - | Chr7:11478510-11478529 | MsG0780036659.01.T01:intron | 45.0% | |
| CAATCGAACCTAAGACCTTG+AGG | + | Chr7:11478255-11478274 | None:intergenic | 45.0% | |
| CATGGCTGAATCTCATTTGC+AGG | - | Chr7:11478931-11478950 | MsG0780036659.01.T01:intron | 45.0% | |
| CCTATTCGTAGGGTCTGTTT+GGG | - | Chr7:11478660-11478679 | MsG0780036659.01.T01:intron | 45.0% | |
| CGCCTAGCGACTTATATATG+TGG | - | Chr7:11478458-11478477 | MsG0780036659.01.T01:intron | 45.0% | |
| CTAGGGATGGTGCAATTAAG+AGG | + | Chr7:11478371-11478390 | None:intergenic | 45.0% | |
| CTCACATTTCCTTGCTTCCT+TGG | - | Chr7:11477893-11477912 | MsG0780036659.01.T01:three_prime_UTR | 45.0% | |
| GAACCTATGCATACTAGGGA+TGG | + | Chr7:11478384-11478403 | None:intergenic | 45.0% | |
| GAGTCCTATAGAACCCACTT+GGG | - | Chr7:11478187-11478206 | MsG0780036659.01.T01:intron | 45.0% | |
| GTCTTAGGTTCGATTGTCTC+CGG | - | Chr7:11478259-11478278 | MsG0780036659.01.T01:intron | 45.0% | |
| TAAACTAGCCCCACCCAAAT+TGG | + | Chr7:11478287-11478306 | None:intergenic | 45.0% | |
| TCCTATTCGTAGGGTCTGTT+TGG | - | Chr7:11478659-11478678 | MsG0780036659.01.T01:intron | 45.0% | |
| TGAGTCCTATAGAACCCACT+TGG | - | Chr7:11478186-11478205 | MsG0780036659.01.T01:intron | 45.0% | |
| TTATCAATGTCCTGAAGGGG+AGG | + | Chr7:11478039-11478058 | None:intergenic | 45.0% | |
| ! | ATTGTCTCCGGTGCCAATTT+GGG | - | Chr7:11478271-11478290 | MsG0780036659.01.T01:intron | 45.0% |
| ! | GGTTCTTATCGTAAGGGCAT+TGG | - | Chr7:11479248-11479267 | MsG0780036659.01.T01:CDS | 45.0% |
| !! | ATCGTAAGGGCATTGGATGT+GGG | - | Chr7:11479255-11479274 | MsG0780036659.01.T01:CDS | 45.0% |
| !! | TATCGTAAGGGCATTGGATG+TGG | - | Chr7:11479254-11479273 | MsG0780036659.01.T01:CDS | 45.0% |
| AGGCGGTTGCATGTCAACTA+TGG | + | Chr7:11478443-11478462 | None:intergenic | 50.0% | |
| CCCAAACAGACCCTACGAAT+AGG | + | Chr7:11478663-11478682 | None:intergenic | 50.0% | |
| CGGTTGCATGTCAACTATGG+TGG | + | Chr7:11478440-11478459 | None:intergenic | 50.0% | |
| CTAGGGGTGGTGCAATTAAG+AGG | - | Chr7:11478527-11478546 | MsG0780036659.01.T01:intron | 50.0% | |
| GAGAGGAACCTGTGCATACT+AGG | - | Chr7:11478509-11478528 | MsG0780036659.01.T01:intron | 50.0% | |
| GAGGAACCTGTGCATACTAG+GGG | - | Chr7:11478511-11478530 | MsG0780036659.01.T01:intron | 50.0% | |
| GATTTGTACTCCTCCCCTTC+AGG | - | Chr7:11478026-11478045 | MsG0780036659.01.T01:CDS | 50.0% | |
| GCACCATCCCTAGTATGCAT+AGG | - | Chr7:11478378-11478397 | MsG0780036659.01.T01:intron | 50.0% | |
| GTGAGCGAAGAACTTGACAG+CGG | - | Chr7:11477815-11477834 | MsG0780036659.01.T01:three_prime_UTR | 50.0% | |
| GTGCTCTTCCTCAAGGTCTT+AGG | - | Chr7:11478244-11478263 | MsG0780036659.01.T01:intron | 50.0% | |
| TTGGAGTGTGCTCTTCCTCA+AGG | - | Chr7:11478237-11478256 | MsG0780036659.01.T01:intron | 50.0% | |
| ! | ATGGTGGCTTGCATGAGGTA+AGG | + | Chr7:11478424-11478443 | None:intergenic | 50.0% |
| ! | ATGTGGGTTGCATGAGGCAA+GGG | - | Chr7:11478475-11478494 | MsG0780036659.01.T01:intron | 50.0% |
| ! | CAACTATGGTGGCTTGCATG+AGG | + | Chr7:11478429-11478448 | None:intergenic | 50.0% |
| ! | CGAACCCAAGTGGGTTCTAT+AGG | + | Chr7:11478194-11478213 | None:intergenic | 50.0% |
| ! | GATTGTCTCCGGTGCCAATT+TGG | - | Chr7:11478270-11478289 | MsG0780036659.01.T01:intron | 50.0% |
| ! | TATGTGGGTTGCATGAGGCA+AGG | - | Chr7:11478474-11478493 | MsG0780036659.01.T01:intron | 50.0% |
| ! | TGGTGGCTTGCATGAGGTAA+GGG | + | Chr7:11478423-11478442 | None:intergenic | 50.0% |
| ! | TTGAGGAAGAGCACACTCCA+AGG | + | Chr7:11478238-11478257 | None:intergenic | 50.0% |
| !! | TCGTAAGGGCATTGGATGTG+GGG | - | Chr7:11479256-11479275 | MsG0780036659.01.T01:CDS | 50.0% |
| !!! | TTTTGGCAGGCTTTTGAGGC+TGG | - | Chr7:11477761-11477780 | MsG0780036659.01.T01:three_prime_UTR | 50.0% |
| GAACCTGTGCATACTAGGGG+TGG | - | Chr7:11478514-11478533 | MsG0780036659.01.T01:intron | 55.0% | |
| ! | TCTCCGGTGCCAATTTGGGT+GGG | - | Chr7:11478275-11478294 | MsG0780036659.01.T01:intron | 55.0% |
| ACCACCAGGCGAACCCAAGT+GGG | + | Chr7:11478203-11478222 | None:intergenic | 60.0% | |
| AGAACCCACTTGGGTTCGCC+TGG | - | Chr7:11478196-11478215 | MsG0780036659.01.T01:intron | 60.0% | |
| AGCCCCACCCAAATTGGCAC+CGG | + | Chr7:11478281-11478300 | None:intergenic | 60.0% | |
| GCACCACCCCTAGTATGCAC+AGG | + | Chr7:11478520-11478539 | None:intergenic | 60.0% | |
| GGGGTCCATAGTTCGAACCC+AGG | - | Chr7:11479275-11479294 | MsG0780036659.01.T01:CDS | 60.0% | |
| ! | CTCCGGTGCCAATTTGGGTG+GGG | - | Chr7:11478276-11478295 | MsG0780036659.01.T01:intron | 60.0% |
| ! | GTCTCCGGTGCCAATTTGGG+TGG | - | Chr7:11478274-11478293 | MsG0780036659.01.T01:intron | 60.0% |
| ! | TTGGGTTCGCCTGGTGGTGT+TGG | - | Chr7:11478205-11478224 | MsG0780036659.01.T01:intron | 60.0% |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | - | Chr7:11478218-11478237 | MsG0780036659.01.T01:intron | 60.0% |
| !! | TCGCCTGGTGGTGTTGGCTT+GGG | - | Chr7:11478211-11478230 | MsG0780036659.01.T01:intron | 60.0% |
| !! | TTCGCCTGGTGGTGTTGGCT+TGG | - | Chr7:11478210-11478229 | MsG0780036659.01.T01:intron | 60.0% |
| ACCCACTTGGGTTCGCCTGG+TGG | - | Chr7:11478199-11478218 | MsG0780036659.01.T01:intron | 65.0% | |
| CACCACCAGGCGAACCCAAG+TGG | + | Chr7:11478204-11478223 | None:intergenic | 65.0% | |
| GGTCCCAAGCCAACACCACC+AGG | + | Chr7:11478217-11478236 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 11477758 | 11479299 | 11477758 | ID=MsG0780036659.01;Name=MsG0780036659.01 |
| Chr7 | mRNA | 11477758 | 11479299 | 11477758 | ID=MsG0780036659.01.T01;Parent=MsG0780036659.01;Name=MsG0780036659.01.T01;_AED=0.46;_eAED=0.47;_QI=0|1|0.5|1|1|1|2|200|81 |
| Chr7 | exon | 11477758 | 11478104 | 11477758 | ID=MsG0780036659.01.T01:exon:1796;Parent=MsG0780036659.01.T01 |
| Chr7 | exon | 11479201 | 11479299 | 11479201 | ID=MsG0780036659.01.T01:exon:1795;Parent=MsG0780036659.01.T01 |
| Chr7 | CDS | 11479201 | 11479299 | 11479201 | ID=MsG0780036659.01.T01:cds;Parent=MsG0780036659.01.T01 |
| Chr7 | CDS | 11477958 | 11478104 | 11477958 | ID=MsG0780036659.01.T01:cds;Parent=MsG0780036659.01.T01 |
| Chr7 | three_prime_UTR | 11477758 | 11477957 | 11477758 | ID=MsG0780036659.01.T01:three_prime_utr;Parent=MsG0780036659.01.T01 |
| Gene Sequence |
| Protein sequence |
