Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003898.01.T01 | XP_013468573.1 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003898.01.T01 | O04336 | 55.844 | 385 | 132 | 14 | 1 | 356 | 1 | 376 | 5.49E-115 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003898.01.T01 | A0A072VWY9 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0.0 | 744 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048186.01 | MsG0180003898.01 | 0.842886 | 1.966660e-58 | 3.023659e-55 |
| MsG0080049076.01 | MsG0180003898.01 | -0.802334 | 5.893340e-49 | 2.879295e-46 |
| MsG0180001143.01 | MsG0180003898.01 | 0.819921 | 9.008724e-53 | 7.026955e-50 |
| MsG0180002546.01 | MsG0180003898.01 | -0.806050 | 9.929382e-50 | 5.336411e-47 |
| MsG0180003792.01 | MsG0180003898.01 | -0.802845 | 4.624236e-49 | 2.288907e-46 |
| MsG0180003898.01 | MsG0180004506.01 | -0.822270 | 2.590760e-53 | 2.158149e-50 |
| MsG0180003898.01 | MsG0180004597.01 | 0.803391 | 3.565725e-49 | 1.789643e-46 |
| MsG0180003898.01 | MsG0180004929.01 | 0.823029 | 1.726046e-53 | 1.469178e-50 |
| MsG0180003898.01 | MsG0280006475.01 | -0.800906 | 1.156644e-48 | 5.450286e-46 |
| MsG0180003898.01 | MsG0280006516.01 | 0.819660 | 1.033534e-52 | 8.002864e-50 |
| MsG0180003898.01 | MsG0280007579.01 | 0.803520 | 3.352694e-49 | 1.688402e-46 |
| MsG0180003898.01 | MsG0280008280.01 | 0.804318 | 2.288095e-49 | 1.176093e-46 |
| MsG0180003898.01 | MsG0280009835.01 | 0.801128 | 1.042065e-48 | 4.937935e-46 |
| MsG0180003898.01 | MsG0280010695.01 | -0.801879 | 7.312226e-49 | 3.531385e-46 |
| MsG0180003898.01 | MsG0280010824.01 | 0.805471 | 1.314049e-49 | 6.957797e-47 |
| MsG0180003898.01 | MsG0380013940.01 | -0.813881 | 2.044349e-51 | 1.351214e-48 |
| MsG0180003898.01 | MsG0380013943.01 | -0.801361 | 9.338748e-49 | 4.451184e-46 |
| MsG0180003898.01 | MsG0380013945.01 | -0.811593 | 6.479166e-51 | 4.026889e-48 |
| MsG0180003898.01 | MsG0380013953.01 | -0.813563 | 2.403098e-51 | 1.574613e-48 |
| MsG0180003898.01 | MsG0380013967.01 | -0.801190 | 1.012211e-48 | 4.803792e-46 |
| MsG0180003898.01 | MsG0380013977.01 | -0.802372 | 5.787650e-49 | 2.830477e-46 |
| MsG0180003898.01 | MsG0380014006.01 | -0.801870 | 7.342777e-49 | 3.545308e-46 |
| MsG0180003898.01 | MsG0380014033.01 | -0.800578 | 1.349831e-48 | 6.307452e-46 |
| MsG0180003898.01 | MsG0380016553.01 | 0.820074 | 8.310537e-53 | 6.510393e-50 |
| MsG0180003898.01 | MsG0380017135.01 | -0.801560 | 8.500353e-49 | 4.071893e-46 |
| MsG0180003898.01 | MsG0380017367.01 | 0.808197 | 3.485456e-50 | 1.980418e-47 |
| MsG0180003898.01 | MsG0480019975.01 | -0.838399 | 2.942942e-57 | 3.937038e-54 |
| MsG0180003898.01 | MsG0480021001.01 | 0.818631 | 1.772451e-52 | 1.333777e-49 |
| MsG0180003898.01 | MsG0480021054.01 | -0.816419 | 5.584300e-52 | 3.954761e-49 |
| MsG0180003898.01 | MsG0480021476.01 | -0.836525 | 8.892382e-57 | 1.123496e-53 |
| MsG0180003898.01 | MsG0480021912.01 | -0.835567 | 1.556971e-56 | 1.911192e-53 |
| MsG0180003898.01 | MsG0480023674.01 | -0.800518 | 1.387860e-48 | 6.475404e-46 |
| MsG0180003898.01 | MsG0480023699.01 | 0.814802 | 1.279978e-51 | 8.673202e-49 |
| MsG0180003898.01 | MsG0480023832.01 | 0.805759 | 1.143096e-49 | 6.098050e-47 |
| MsG0180003898.01 | MsG0580026546.01 | 0.838978 | 2.085117e-57 | 2.839139e-54 |
| MsG0180003898.01 | MsG0580029023.01 | 0.836045 | 1.177659e-56 | 1.466686e-53 |
| MsG0180003898.01 | MsG0780041637.01 | -0.820500 | 6.639104e-53 | 5.262076e-50 |
| MsG0180003898.01 | MsG0880042832.01 | 0.835128 | 2.009118e-56 | 2.433878e-53 |
| MsG0180003898.01 | MsG0880043510.01 | 0.800693 | 1.278347e-48 | 5.990862e-46 |
| MsG0180003898.01 | MsG0880046228.01 | 0.805000 | 1.649107e-49 | 8.626875e-47 |
| MsG0180003898.01 | MsG0880046615.01 | 0.804410 | 2.189265e-49 | 1.127946e-46 |
| MsG0180003898.01 | MsG0880047423.01 | 0.820091 | 8.236370e-53 | 6.455452e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003898.01.T01 | MTR_1g070455 | 99.167 | 360 | 3 | 0 | 1 | 360 | 1 | 360 | 0.0 | 744 |
| MsG0180003898.01.T01 | MTR_1g009613 | 36.313 | 358 | 162 | 10 | 4 | 350 | 17 | 319 | 2.77e-57 | 190 |
| MsG0180003898.01.T01 | MTR_4g094908 | 56.044 | 182 | 58 | 4 | 183 | 351 | 152 | 324 | 2.69e-55 | 184 |
| MsG0180003898.01.T01 | MTR_5g016610 | 74.074 | 108 | 26 | 2 | 245 | 351 | 151 | 257 | 4.71e-53 | 176 |
| MsG0180003898.01.T01 | MTR_4g127040 | 63.768 | 138 | 39 | 4 | 218 | 352 | 175 | 304 | 1.10e-51 | 174 |
| MsG0180003898.01.T01 | MTR_3g108960 | 48.466 | 163 | 72 | 5 | 205 | 359 | 222 | 380 | 3.45e-40 | 146 |
| MsG0180003898.01.T01 | MTR_0117s0040 | 59.494 | 79 | 32 | 0 | 272 | 350 | 53 | 131 | 6.91e-30 | 115 |
| MsG0180003898.01.T01 | MTR_2g016770 | 55.682 | 88 | 38 | 1 | 268 | 354 | 9 | 96 | 2.04e-27 | 107 |
| MsG0180003898.01.T01 | MTR_2g016770 | 55.294 | 85 | 37 | 1 | 271 | 354 | 4 | 88 | 3.04e-26 | 104 |
| MsG0180003898.01.T01 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 6.27e-26 | 108 |
| MsG0180003898.01.T01 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 7.69e-26 | 107 |
| MsG0180003898.01.T01 | MTR_8g087000 | 52.222 | 90 | 36 | 1 | 269 | 351 | 45 | 134 | 8.61e-26 | 104 |
| MsG0180003898.01.T01 | MTR_2g083870 | 53.191 | 94 | 28 | 2 | 269 | 351 | 50 | 138 | 1.78e-25 | 103 |
| MsG0180003898.01.T01 | MTR_2g024350 | 61.972 | 71 | 26 | 1 | 290 | 360 | 5 | 74 | 2.19e-25 | 102 |
| MsG0180003898.01.T01 | MTR_8g087000 | 68.333 | 60 | 19 | 0 | 292 | 351 | 76 | 135 | 4.40e-25 | 102 |
| MsG0180003898.01.T01 | MTR_7g079040 | 57.831 | 83 | 30 | 1 | 268 | 350 | 134 | 211 | 5.37e-25 | 103 |
| MsG0180003898.01.T01 | MTR_2g024380 | 54.118 | 85 | 36 | 1 | 268 | 352 | 229 | 310 | 1.10e-24 | 105 |
| MsG0180003898.01.T01 | MTR_8g028565 | 57.831 | 83 | 30 | 2 | 268 | 350 | 135 | 212 | 4.05e-23 | 99.0 |
| MsG0180003898.01.T01 | MTR_7g109600 | 50.562 | 89 | 40 | 1 | 266 | 350 | 22 | 110 | 5.47e-23 | 97.1 |
| MsG0180003898.01.T01 | MTR_1g099600 | 66.102 | 59 | 20 | 0 | 294 | 352 | 186 | 244 | 3.76e-22 | 95.9 |
| MsG0180003898.01.T01 | MTR_8g098945 | 54.286 | 70 | 28 | 1 | 281 | 350 | 121 | 186 | 3.32e-19 | 86.7 |
| MsG0180003898.01.T01 | MTR_3g053330 | 51.389 | 72 | 35 | 0 | 289 | 360 | 247 | 318 | 3.74e-19 | 89.0 |
| MsG0180003898.01.T01 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 267 | 331 | 5.19e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 254 | 318 | 5.51e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 249 | 308 | 5.57e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 227 | 286 | 5.75e-19 | 87.8 |
| MsG0180003898.01.T01 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 411 | 475 | 7.36e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 398 | 462 | 8.15e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 361 | 420 | 8.71e-19 | 88.2 |
| MsG0180003898.01.T01 | MTR_4g082580 | 46.591 | 88 | 45 | 2 | 273 | 360 | 258 | 343 | 8.81e-19 | 87.0 |
| MsG0180003898.01.T01 | MTR_8g067635 | 48.913 | 92 | 40 | 2 | 268 | 359 | 327 | 411 | 1.20e-18 | 87.4 |
| MsG0180003898.01.T01 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 200 | 283 | 1.25e-18 | 87.0 |
| MsG0180003898.01.T01 | MTR_7g109800 | 44.578 | 83 | 45 | 1 | 268 | 350 | 120 | 201 | 1.39e-18 | 85.5 |
| MsG0180003898.01.T01 | MTR_5g042920 | 34.641 | 153 | 94 | 3 | 208 | 360 | 239 | 385 | 1.44e-18 | 87.0 |
| MsG0180003898.01.T01 | MTR_5g042920 | 53.968 | 63 | 26 | 3 | 289 | 350 | 146 | 206 | 1.68e-12 | 68.6 |
| MsG0180003898.01.T01 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 173 | 256 | 1.50e-18 | 86.7 |
| MsG0180003898.01.T01 | MTR_1g013760 | 47.945 | 73 | 36 | 1 | 279 | 351 | 128 | 198 | 1.96e-18 | 84.7 |
| MsG0180003898.01.T01 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 235 | 291 | 2.17e-18 | 86.7 |
| MsG0180003898.01.T01 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 244 | 300 | 2.45e-18 | 86.7 |
| MsG0180003898.01.T01 | MTR_7g011820 | 63.158 | 57 | 20 | 1 | 294 | 350 | 411 | 466 | 2.93e-18 | 86.3 |
| MsG0180003898.01.T01 | MTR_7g011820 | 53.125 | 64 | 27 | 3 | 290 | 352 | 224 | 285 | 3.83e-13 | 70.9 |
| MsG0180003898.01.T01 | MTR_2g023930 | 47.436 | 78 | 41 | 0 | 277 | 354 | 289 | 366 | 3.45e-18 | 86.3 |
| MsG0180003898.01.T01 | MTR_7g062220 | 49.367 | 79 | 36 | 2 | 276 | 354 | 110 | 184 | 3.86e-18 | 84.3 |
| MsG0180003898.01.T01 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 98 | 189 | 4.32e-18 | 83.6 |
| MsG0180003898.01.T01 | MTR_3g106060 | 55.172 | 58 | 26 | 0 | 294 | 351 | 139 | 196 | 4.52e-18 | 84.0 |
| MsG0180003898.01.T01 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 132 | 223 | 6.13e-18 | 84.0 |
| MsG0180003898.01.T01 | MTR_4g013260 | 49.351 | 77 | 35 | 2 | 277 | 350 | 317 | 392 | 7.14e-18 | 85.1 |
| MsG0180003898.01.T01 | MTR_4g013260 | 50.847 | 59 | 28 | 1 | 294 | 352 | 185 | 242 | 3.73e-13 | 70.9 |
| MsG0180003898.01.T01 | MTR_7g100510 | 57.895 | 57 | 23 | 1 | 294 | 350 | 362 | 417 | 8.29e-18 | 84.7 |
| MsG0180003898.01.T01 | MTR_7g100510 | 52.055 | 73 | 30 | 4 | 281 | 352 | 178 | 246 | 8.99e-15 | 75.5 |
| MsG0180003898.01.T01 | MTR_2g088000 | 47.436 | 78 | 41 | 0 | 277 | 354 | 333 | 410 | 8.55e-18 | 85.1 |
| MsG0180003898.01.T01 | MTR_8g069935 | 57.627 | 59 | 25 | 0 | 294 | 352 | 332 | 390 | 1.15e-17 | 84.3 |
| MsG0180003898.01.T01 | MTR_4g049790 | 57.895 | 57 | 24 | 0 | 294 | 350 | 313 | 369 | 2.05e-17 | 84.0 |
| MsG0180003898.01.T01 | MTR_7g071120 | 33.143 | 175 | 95 | 6 | 196 | 360 | 227 | 389 | 2.05e-17 | 83.6 |
| MsG0180003898.01.T01 | MTR_7g071120 | 52.542 | 59 | 26 | 2 | 294 | 352 | 167 | 223 | 6.42e-12 | 67.0 |
| MsG0180003898.01.T01 | MTR_4g130900 | 57.895 | 57 | 23 | 1 | 294 | 350 | 360 | 415 | 2.06e-17 | 83.6 |
| MsG0180003898.01.T01 | MTR_5g074400 | 36.508 | 126 | 72 | 2 | 232 | 350 | 352 | 476 | 3.74e-17 | 83.2 |
| MsG0180003898.01.T01 | MTR_5g074400 | 52.542 | 59 | 26 | 2 | 294 | 352 | 244 | 300 | 1.62e-12 | 68.9 |
| MsG0180003898.01.T01 | MTR_7g080000 | 48.193 | 83 | 38 | 3 | 276 | 355 | 412 | 492 | 4.11e-17 | 83.2 |
| MsG0180003898.01.T01 | MTR_7g080000 | 54.237 | 59 | 25 | 2 | 294 | 352 | 235 | 291 | 1.36e-11 | 66.2 |
| MsG0180003898.01.T01 | MTR_3g104750 | 41.414 | 99 | 56 | 2 | 252 | 350 | 64 | 160 | 4.14e-17 | 78.2 |
| MsG0180003898.01.T01 | MTR_3g031220 | 48.718 | 78 | 39 | 1 | 273 | 350 | 345 | 421 | 4.18e-17 | 82.8 |
| MsG0180003898.01.T01 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 4.30e-13 | 70.5 |
| MsG0180003898.01.T01 | MTR_4g094588 | 54.839 | 62 | 26 | 2 | 294 | 355 | 179 | 238 | 4.71e-17 | 81.6 |
| MsG0180003898.01.T01 | MTR_7g009730 | 56.140 | 57 | 25 | 0 | 294 | 350 | 220 | 276 | 5.61e-17 | 82.8 |
| MsG0180003898.01.T01 | MTR_4g132430 | 52.459 | 61 | 29 | 0 | 294 | 354 | 128 | 188 | 6.70e-17 | 81.3 |
| MsG0180003898.01.T01 | MTR_5g091390 | 52.239 | 67 | 31 | 1 | 294 | 360 | 158 | 223 | 7.43e-17 | 80.5 |
| MsG0180003898.01.T01 | MTR_3g009470 | 37.500 | 112 | 57 | 3 | 251 | 350 | 441 | 551 | 8.46e-17 | 82.4 |
| MsG0180003898.01.T01 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.97e-12 | 68.2 |
| MsG0180003898.01.T01 | MTR_4g132430 | 52.308 | 65 | 28 | 1 | 294 | 358 | 262 | 323 | 9.47e-17 | 81.6 |
| MsG0180003898.01.T01 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 179 | 236 | 9.72e-17 | 81.6 |
| MsG0180003898.01.T01 | MTR_2g105060 | 51.667 | 60 | 29 | 0 | 291 | 350 | 167 | 226 | 1.04e-16 | 80.5 |
| MsG0180003898.01.T01 | MTR_2g105060 | 52.632 | 57 | 27 | 0 | 294 | 350 | 95 | 151 | 1.12e-16 | 79.0 |
| MsG0180003898.01.T01 | MTR_1g015140 | 38.384 | 99 | 58 | 2 | 252 | 350 | 63 | 158 | 1.39e-16 | 76.6 |
| MsG0180003898.01.T01 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 256 | 313 | 1.41e-16 | 81.6 |
| MsG0180003898.01.T01 | MTR_8g067650 | 47.170 | 106 | 45 | 3 | 261 | 359 | 300 | 401 | 1.45e-16 | 81.3 |
| MsG0180003898.01.T01 | MTR_2g045360 | 52.459 | 61 | 29 | 0 | 294 | 354 | 212 | 272 | 1.63e-16 | 80.9 |
| MsG0180003898.01.T01 | MTR_7g080020 | 48.780 | 82 | 37 | 3 | 277 | 355 | 474 | 553 | 1.98e-16 | 81.3 |
| MsG0180003898.01.T01 | MTR_7g080020 | 52.542 | 59 | 26 | 2 | 294 | 352 | 281 | 337 | 4.91e-11 | 64.7 |
| MsG0180003898.01.T01 | MTR_6g053200 | 43.678 | 87 | 46 | 1 | 266 | 352 | 306 | 389 | 6.27e-16 | 79.3 |
| MsG0180003898.01.T01 | MTR_1g013790 | 46.970 | 66 | 34 | 1 | 291 | 356 | 99 | 163 | 7.67e-16 | 77.0 |
| MsG0180003898.01.T01 | MTR_1g077780 | 43.182 | 88 | 48 | 2 | 273 | 360 | 42 | 127 | 8.76e-16 | 73.9 |
| MsG0180003898.01.T01 | MTR_8g007270 | 39.583 | 96 | 52 | 3 | 268 | 360 | 126 | 218 | 9.17e-16 | 76.3 |
| MsG0180003898.01.T01 | MTR_5g097490 | 56.897 | 58 | 24 | 1 | 294 | 351 | 253 | 309 | 9.54e-16 | 78.2 |
| MsG0180003898.01.T01 | MTR_8g092010 | 52.459 | 61 | 28 | 1 | 290 | 350 | 105 | 164 | 2.52e-15 | 73.9 |
| MsG0180003898.01.T01 | MTR_5g043880 | 41.860 | 86 | 49 | 1 | 268 | 353 | 99 | 183 | 2.82e-15 | 75.5 |
| MsG0180003898.01.T01 | MTR_7g079010 | 43.750 | 80 | 41 | 2 | 274 | 350 | 119 | 197 | 3.13e-15 | 74.3 |
| MsG0180003898.01.T01 | MTR_1g086790 | 39.759 | 83 | 49 | 1 | 268 | 350 | 133 | 214 | 3.62e-15 | 75.9 |
| MsG0180003898.01.T01 | MTR_8g092140 | 47.619 | 63 | 32 | 1 | 289 | 351 | 156 | 217 | 3.90e-15 | 74.3 |
| MsG0180003898.01.T01 | MTR_5g067680 | 38.462 | 117 | 64 | 4 | 250 | 359 | 155 | 270 | 4.77e-15 | 75.9 |
| MsG0180003898.01.T01 | MTR_3g090860 | 54.386 | 57 | 24 | 1 | 294 | 348 | 134 | 190 | 7.26e-15 | 75.1 |
| MsG0180003898.01.T01 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 140 | 201 | 8.49e-15 | 73.2 |
| MsG0180003898.01.T01 | MTR_4g049760 | 56.604 | 53 | 23 | 0 | 298 | 350 | 295 | 347 | 9.37e-15 | 75.9 |
| MsG0180003898.01.T01 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 164 | 225 | 1.04e-14 | 73.6 |
| MsG0180003898.01.T01 | MTR_3g095040 | 42.500 | 80 | 45 | 1 | 271 | 350 | 96 | 174 | 6.18e-14 | 70.5 |
| MsG0180003898.01.T01 | MTR_2g033820 | 50.877 | 57 | 27 | 1 | 294 | 350 | 204 | 259 | 7.09e-14 | 72.4 |
| MsG0180003898.01.T01 | MTR_7g117200 | 46.429 | 84 | 41 | 3 | 269 | 348 | 92 | 175 | 1.93e-13 | 70.9 |
| MsG0180003898.01.T01 | MTR_1g078260 | 53.846 | 65 | 28 | 2 | 290 | 353 | 244 | 307 | 2.21e-13 | 71.6 |
| MsG0180003898.01.T01 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 2.27e-13 | 70.9 |
| MsG0180003898.01.T01 | MTR_4g122530 | 47.368 | 57 | 29 | 1 | 294 | 350 | 209 | 264 | 3.90e-13 | 70.5 |
| MsG0180003898.01.T01 | MTR_8g027860 | 41.860 | 86 | 47 | 2 | 266 | 348 | 108 | 193 | 8.57e-13 | 68.9 |
| MsG0180003898.01.T01 | MTR_7g028415 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 9.63e-13 | 66.2 |
| MsG0180003898.01.T01 | MTR_7g028710 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 9.63e-13 | 66.2 |
| MsG0180003898.01.T01 | MTR_8g099350 | 41.667 | 84 | 46 | 2 | 268 | 348 | 106 | 189 | 1.86e-12 | 68.2 |
| MsG0180003898.01.T01 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.13e-12 | 68.6 |
| MsG0180003898.01.T01 | MTR_5g018380 | 51.724 | 58 | 25 | 2 | 293 | 350 | 123 | 177 | 2.22e-12 | 65.5 |
| MsG0180003898.01.T01 | MTR_6g086555 | 30.968 | 155 | 91 | 5 | 198 | 351 | 125 | 264 | 3.60e-12 | 67.4 |
| MsG0180003898.01.T01 | MTR_8g087000 | 64.103 | 39 | 14 | 0 | 313 | 351 | 35 | 73 | 3.91e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003898.01.T01 | AT2G30590 | 55.844 | 385 | 132 | 14 | 1 | 356 | 1 | 376 | 5.59e-116 | 342 |
| MsG0180003898.01.T01 | AT3G04670 | 50.959 | 365 | 124 | 13 | 1 | 353 | 1 | 322 | 2.25e-104 | 310 |
| MsG0180003898.01.T01 | AT5G28650 | 47.790 | 362 | 140 | 9 | 1 | 353 | 1 | 322 | 9.03e-100 | 298 |
| MsG0180003898.01.T01 | AT3G04670 | 47.416 | 329 | 118 | 13 | 1 | 317 | 1 | 286 | 1.54e-75 | 235 |
| MsG0180003898.01.T01 | AT4G31550 | 51.087 | 184 | 60 | 6 | 180 | 350 | 137 | 303 | 1.18e-53 | 180 |
| MsG0180003898.01.T01 | AT4G31550 | 51.630 | 184 | 58 | 7 | 180 | 350 | 137 | 302 | 8.62e-53 | 177 |
| MsG0180003898.01.T01 | AT2G24570 | 56.376 | 149 | 51 | 3 | 214 | 350 | 154 | 300 | 1.04e-52 | 177 |
| MsG0180003898.01.T01 | AT4G24240 | 54.545 | 176 | 55 | 6 | 187 | 353 | 182 | 341 | 1.31e-52 | 178 |
| MsG0180003898.01.T01 | AT2G23320 | 70.000 | 110 | 29 | 2 | 245 | 351 | 190 | 298 | 1.32e-50 | 172 |
| MsG0180003898.01.T01 | AT1G29280 | 55.435 | 92 | 34 | 3 | 266 | 350 | 40 | 131 | 2.75e-27 | 108 |
| MsG0180003898.01.T01 | AT4G31550 | 44.218 | 147 | 51 | 7 | 180 | 313 | 137 | 265 | 4.22e-26 | 105 |
| MsG0180003898.01.T01 | AT3G58710 | 50.980 | 102 | 33 | 3 | 269 | 359 | 40 | 135 | 1.49e-25 | 104 |
| MsG0180003898.01.T01 | AT4G24240 | 47.059 | 136 | 47 | 6 | 187 | 313 | 182 | 301 | 2.24e-25 | 104 |
| MsG0180003898.01.T01 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 174 | 277 | 2.27e-25 | 106 |
| MsG0180003898.01.T01 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 183 | 286 | 2.50e-25 | 106 |
| MsG0180003898.01.T01 | AT3G58710 | 50.000 | 102 | 34 | 3 | 269 | 359 | 41 | 136 | 6.93e-25 | 102 |
| MsG0180003898.01.T01 | AT2G23320 | 66.667 | 72 | 20 | 2 | 245 | 313 | 190 | 260 | 7.71e-25 | 102 |
| MsG0180003898.01.T01 | AT4G01250 | 45.600 | 125 | 62 | 2 | 227 | 350 | 66 | 185 | 4.84e-24 | 100 |
| MsG0180003898.01.T01 | AT1G30650 | 52.874 | 87 | 36 | 1 | 269 | 350 | 188 | 274 | 8.29e-24 | 102 |
| MsG0180003898.01.T01 | AT5G52830 | 52.941 | 85 | 36 | 1 | 268 | 352 | 144 | 224 | 7.23e-22 | 95.5 |
| MsG0180003898.01.T01 | AT5G26170 | 52.308 | 65 | 30 | 1 | 289 | 353 | 109 | 172 | 1.13e-19 | 85.9 |
| MsG0180003898.01.T01 | AT4G23550 | 60.317 | 63 | 24 | 1 | 294 | 356 | 141 | 202 | 1.19e-19 | 88.6 |
| MsG0180003898.01.T01 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 278 | 343 | 2.95e-19 | 89.4 |
| MsG0180003898.01.T01 | AT4G18170 | 38.017 | 121 | 67 | 3 | 235 | 355 | 120 | 232 | 3.18e-19 | 87.8 |
| MsG0180003898.01.T01 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 302 | 367 | 3.29e-19 | 89.0 |
| MsG0180003898.01.T01 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.13e-18 | 84.0 |
| MsG0180003898.01.T01 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.36e-12 | 66.6 |
| MsG0180003898.01.T01 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.13e-18 | 84.0 |
| MsG0180003898.01.T01 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.36e-12 | 66.6 |
| MsG0180003898.01.T01 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.13e-18 | 84.0 |
| MsG0180003898.01.T01 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.36e-12 | 66.6 |
| MsG0180003898.01.T01 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.13e-18 | 84.0 |
| MsG0180003898.01.T01 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.36e-12 | 66.6 |
| MsG0180003898.01.T01 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 219 | 312 | 2.48e-18 | 85.5 |
| MsG0180003898.01.T01 | AT1G13960 | 56.452 | 62 | 24 | 3 | 290 | 350 | 72 | 131 | 2.05e-14 | 73.9 |
| MsG0180003898.01.T01 | AT2G38470 | 59.016 | 61 | 24 | 1 | 290 | 350 | 359 | 418 | 2.54e-18 | 86.7 |
| MsG0180003898.01.T01 | AT2G38470 | 54.237 | 59 | 25 | 2 | 294 | 352 | 185 | 241 | 3.25e-13 | 71.2 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.09e-18 | 85.5 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.09e-18 | 85.5 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.09e-18 | 85.5 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.09e-18 | 85.5 |
| MsG0180003898.01.T01 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 182 | 260 | 3.32e-18 | 85.9 |
| MsG0180003898.01.T01 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 276 | 354 | 4.30e-18 | 85.9 |
| MsG0180003898.01.T01 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 212 | 294 | 4.50e-18 | 84.3 |
| MsG0180003898.01.T01 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 112 | 175 | 2.82e-12 | 67.4 |
| MsG0180003898.01.T01 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 372 | 465 | 4.58e-18 | 85.9 |
| MsG0180003898.01.T01 | AT1G13960 | 48.101 | 79 | 32 | 4 | 272 | 350 | 215 | 284 | 3.20e-14 | 74.3 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 305 | 369 | 5.05e-18 | 85.5 |
| MsG0180003898.01.T01 | AT1G68150 | 57.895 | 57 | 24 | 0 | 294 | 350 | 236 | 292 | 5.47e-18 | 84.7 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 337 | 401 | 5.96e-18 | 85.5 |
| MsG0180003898.01.T01 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 377 | 441 | 5.98e-18 | 85.5 |
| MsG0180003898.01.T01 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1131 | 1209 | 7.28e-18 | 85.9 |
| MsG0180003898.01.T01 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1159 | 1237 | 8.31e-18 | 85.5 |
| MsG0180003898.01.T01 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1020 | 1098 | 9.46e-18 | 85.5 |
| MsG0180003898.01.T01 | AT1G62300 | 44.186 | 86 | 40 | 1 | 269 | 354 | 296 | 373 | 1.59e-17 | 84.3 |
| MsG0180003898.01.T01 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.45e-17 | 83.6 |
| MsG0180003898.01.T01 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.45e-17 | 83.6 |
| MsG0180003898.01.T01 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.45e-17 | 83.6 |
| MsG0180003898.01.T01 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.45e-17 | 83.6 |
| MsG0180003898.01.T01 | AT2G03340 | 46.154 | 78 | 41 | 1 | 273 | 350 | 395 | 471 | 2.72e-17 | 83.6 |
| MsG0180003898.01.T01 | AT2G03340 | 55.556 | 63 | 25 | 3 | 289 | 350 | 245 | 305 | 8.59e-14 | 72.8 |
| MsG0180003898.01.T01 | AT1G29860 | 44.595 | 74 | 40 | 1 | 277 | 350 | 120 | 192 | 2.86e-17 | 81.6 |
| MsG0180003898.01.T01 | AT5G49520 | 56.140 | 57 | 24 | 1 | 294 | 350 | 222 | 277 | 2.93e-17 | 82.8 |
| MsG0180003898.01.T01 | AT4G01720 | 55.738 | 61 | 27 | 0 | 294 | 354 | 240 | 300 | 3.18e-17 | 83.2 |
| MsG0180003898.01.T01 | AT4G30935 | 56.140 | 57 | 24 | 1 | 294 | 350 | 332 | 387 | 3.67e-17 | 82.8 |
| MsG0180003898.01.T01 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 186 | 243 | 5.54e-17 | 82.4 |
| MsG0180003898.01.T01 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 228 | 285 | 5.89e-17 | 82.4 |
| MsG0180003898.01.T01 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 96 | 168 | 1.32e-16 | 79.0 |
| MsG0180003898.01.T01 | AT5G56270 | 49.351 | 77 | 35 | 2 | 277 | 350 | 468 | 543 | 1.64e-16 | 81.3 |
| MsG0180003898.01.T01 | AT5G56270 | 50.820 | 61 | 28 | 2 | 294 | 354 | 274 | 332 | 4.64e-11 | 64.7 |
| MsG0180003898.01.T01 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 324 | 400 | 1.99e-16 | 80.9 |
| MsG0180003898.01.T01 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 6.25e-13 | 70.1 |
| MsG0180003898.01.T01 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 286 | 362 | 2.04e-16 | 80.5 |
| MsG0180003898.01.T01 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 163 | 224 | 6.20e-13 | 70.1 |
| MsG0180003898.01.T01 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 161 | 233 | 2.23e-16 | 79.3 |
| MsG0180003898.01.T01 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 230 | 325 | 2.43e-16 | 79.7 |
| MsG0180003898.01.T01 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 86 | 142 | 1.02e-12 | 68.9 |
| MsG0180003898.01.T01 | AT2G40740 | 40.426 | 94 | 53 | 2 | 259 | 349 | 138 | 231 | 2.49e-16 | 79.0 |
| MsG0180003898.01.T01 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 228 | 323 | 2.53e-16 | 79.7 |
| MsG0180003898.01.T01 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 84 | 140 | 1.05e-12 | 68.9 |
| MsG0180003898.01.T01 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 310 | 405 | 3.51e-16 | 79.7 |
| MsG0180003898.01.T01 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 166 | 222 | 1.04e-12 | 69.3 |
| MsG0180003898.01.T01 | AT5G45260 | 46.237 | 93 | 38 | 4 | 269 | 356 | 1187 | 1272 | 3.60e-16 | 80.5 |
| MsG0180003898.01.T01 | AT2G40740 | 40.860 | 93 | 52 | 2 | 259 | 348 | 147 | 239 | 3.76e-16 | 78.6 |
| MsG0180003898.01.T01 | AT4G39410 | 41.860 | 86 | 46 | 2 | 269 | 351 | 196 | 280 | 4.08e-16 | 78.6 |
| MsG0180003898.01.T01 | AT5G43290 | 49.367 | 79 | 36 | 2 | 276 | 354 | 100 | 174 | 4.19e-16 | 77.8 |
| MsG0180003898.01.T01 | AT2G47260 | 40.964 | 83 | 48 | 1 | 268 | 350 | 149 | 230 | 9.30e-16 | 77.8 |
| MsG0180003898.01.T01 | AT5G46350 | 51.613 | 62 | 28 | 2 | 294 | 355 | 184 | 243 | 1.01e-15 | 77.8 |
| MsG0180003898.01.T01 | AT4G26440 | 46.914 | 81 | 41 | 2 | 274 | 354 | 353 | 431 | 1.17e-15 | 78.6 |
| MsG0180003898.01.T01 | AT4G26440 | 51.562 | 64 | 28 | 3 | 292 | 354 | 176 | 237 | 1.76e-11 | 65.9 |
| MsG0180003898.01.T01 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MsG0180003898.01.T01 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MsG0180003898.01.T01 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MsG0180003898.01.T01 | AT3G62340 | 43.902 | 82 | 45 | 1 | 271 | 352 | 96 | 176 | 1.45e-15 | 76.6 |
| MsG0180003898.01.T01 | AT2G44745 | 38.298 | 94 | 52 | 3 | 270 | 360 | 119 | 209 | 1.69e-15 | 75.1 |
| MsG0180003898.01.T01 | AT1G80840 | 36.975 | 119 | 62 | 4 | 245 | 350 | 85 | 203 | 1.78e-15 | 76.6 |
| MsG0180003898.01.T01 | AT1G18860 | 54.386 | 57 | 26 | 0 | 294 | 350 | 240 | 296 | 1.82e-15 | 78.2 |
| MsG0180003898.01.T01 | AT1G55600 | 50.725 | 69 | 30 | 2 | 290 | 358 | 304 | 368 | 1.99e-15 | 77.8 |
| MsG0180003898.01.T01 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 187 | 261 | 3.97e-15 | 76.3 |
| MsG0180003898.01.T01 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 129 | 203 | 4.65e-15 | 75.9 |
| MsG0180003898.01.T01 | AT2G21900 | 56.140 | 57 | 24 | 1 | 294 | 350 | 110 | 165 | 5.81e-15 | 73.2 |
| MsG0180003898.01.T01 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.38e-15 | 73.6 |
| MsG0180003898.01.T01 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.38e-15 | 73.6 |
| MsG0180003898.01.T01 | AT5G41570 | 43.529 | 85 | 44 | 2 | 269 | 350 | 71 | 154 | 8.96e-15 | 72.4 |
| MsG0180003898.01.T01 | AT5G64810 | 49.180 | 61 | 30 | 1 | 290 | 350 | 107 | 166 | 1.15e-14 | 72.4 |
| MsG0180003898.01.T01 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 126 | 182 | 1.21e-14 | 73.2 |
| MsG0180003898.01.T01 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 147 | 203 | 1.46e-14 | 73.6 |
| MsG0180003898.01.T01 | AT2G46130 | 50.000 | 62 | 30 | 1 | 289 | 350 | 26 | 86 | 2.33e-14 | 68.9 |
| MsG0180003898.01.T01 | AT1G64000 | 38.095 | 84 | 51 | 1 | 267 | 350 | 88 | 170 | 2.43e-14 | 71.2 |
| MsG0180003898.01.T01 | AT2G30250 | 42.857 | 84 | 43 | 4 | 275 | 355 | 307 | 388 | 4.00e-14 | 73.6 |
| MsG0180003898.01.T01 | AT3G01970 | 47.619 | 63 | 32 | 1 | 289 | 351 | 61 | 122 | 1.07e-13 | 68.2 |
| MsG0180003898.01.T01 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 4.65e-13 | 69.7 |
| MsG0180003898.01.T01 | AT5G13080 | 45.161 | 62 | 33 | 1 | 289 | 350 | 63 | 123 | 8.14e-13 | 65.9 |
| MsG0180003898.01.T01 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 89 | 198 | 2.01e-12 | 67.8 |
| MsG0180003898.01.T01 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 57 | 166 | 2.13e-12 | 67.4 |
| MsG0180003898.01.T01 | AT4G23810 | 45.882 | 85 | 43 | 2 | 268 | 349 | 132 | 216 | 5.13e-12 | 66.6 |
| MsG0180003898.01.T01 | AT1G69310 | 48.333 | 60 | 26 | 2 | 294 | 353 | 148 | 202 | 2.06e-11 | 64.3 |
| MsG0180003898.01.T01 | AT4G12020 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.08e-11 | 63.9 |
| MsG0180003898.01.T01 | AT4G12020 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.08e-11 | 63.9 |
| MsG0180003898.01.T01 | AT1G66560 | 47.458 | 59 | 29 | 1 | 292 | 348 | 102 | 160 | 9.19e-11 | 62.0 |
Find 108 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGGGTTCTCTAAATTAA+TGG | 0.160115 | 1:-69812654 | MsG0180003898.01.T01:three_prime_UTR |
| TGGAAATTGTCTTCGGAAAA+TGG | 0.189556 | 1:-69812634 | MsG0180003898.01.T01:three_prime_UTR |
| AGTATGTTATTAAACATTTC+AGG | 0.193089 | 1:-69812671 | MsG0180003898.01.T01:three_prime_UTR |
| CAAGAGAAAGTGGATTTCTT+AGG | 0.196128 | 1:+69814266 | None:intergenic |
| TAGAAAGAGAGAGGCTAAAA+TGG | 0.224186 | 1:-69814620 | MsG0180003898.01.T01:exon |
| CATGCAGTTCATGCATTTGC+AGG | 0.256684 | 1:+69812916 | None:intergenic |
| TTCTCTTGGAAACCCTTCTT+TGG | 0.278708 | 1:-69814251 | MsG0180003898.01.T01:CDS |
| AAAGTTGTGTCTTTGCTTCA+TGG | 0.278912 | 1:-69814463 | MsG0180003898.01.T01:CDS |
| TAGTAGCCTTGTCAAAATTA+AGG | 0.303036 | 1:+69814026 | None:intergenic |
| AGTGCTGGAGTATGTAAAAT+TGG | 0.339279 | 1:-69812731 | MsG0180003898.01.T01:three_prime_UTR |
| TAGAGTGAAGAGATCAATTA+AGG | 0.339973 | 1:-69813684 | MsG0180003898.01.T01:CDS |
| CAAAATTCAGTTCAGGAACT+TGG | 0.342737 | 1:-69814295 | MsG0180003898.01.T01:CDS |
| AACAACAGCAACAAGATTCT+AGG | 0.351494 | 1:-69815076 | MsG0180003898.01.T01:five_prime_UTR |
| GGAAGTTCCTTCCATTTGAT+TGG | 0.353546 | 1:-69813926 | MsG0180003898.01.T01:CDS |
| TGTGTCTTTGCTTCATGGTT+TGG | 0.359375 | 1:-69814458 | MsG0180003898.01.T01:CDS |
| GTTTGGATCATTCAAGAGTT+AGG | 0.362142 | 1:-69814441 | MsG0180003898.01.T01:CDS |
| CTAAGAAATCCACTTTCTCT+TGG | 0.374963 | 1:-69814265 | MsG0180003898.01.T01:CDS |
| AGGAATTTAACTGTTGAAAC+TGG | 0.385192 | 1:-69814508 | MsG0180003898.01.T01:CDS |
| GTGATTATGCTCGCCTTCAT+AGG | 0.392014 | 1:+69812957 | None:intergenic |
| TGCTGTTGTTGATGTTTCCA+TGG | 0.402615 | 1:+69815089 | None:intergenic |
| TGTGAAGACCTCTATGTGAT+TGG | 0.408353 | 1:-69812873 | MsG0180003898.01.T01:three_prime_UTR |
| AAGAAAGCAGTTTGAGGATA+AGG | 0.412296 | 1:+69814394 | None:intergenic |
| CAAGGGATCAAGTTCATCAT+AGG | 0.420309 | 1:-69814528 | MsG0180003898.01.T01:CDS |
| TTATGCCGCTGGTGTTCCTT+CGG | 0.429874 | 1:+69814050 | None:intergenic |
| TTTGAACTCAATTCCAAAGA+AGG | 0.431276 | 1:+69814238 | None:intergenic |
| CTATCCTCAAAATTCAGTTC+AGG | 0.434300 | 1:-69814302 | MsG0180003898.01.T01:CDS |
| TTGGGGAGTCGTTTATTTAG+AGG | 0.434562 | 1:-69812776 | MsG0180003898.01.T01:three_prime_UTR |
| CACCAACAATGTCGTCTACT+AGG | 0.435790 | 1:-69813997 | MsG0180003898.01.T01:CDS |
| CTTTGGAATTGAGTTCAAAC+GGG | 0.435936 | 1:-69814234 | MsG0180003898.01.T01:CDS |
| AAGAGAAAGTGGATTTCTTA+GGG | 0.437226 | 1:+69814267 | None:intergenic |
| CTCTCAACATGCTTCCTAGC+AGG | 0.437995 | 1:+69813012 | None:intergenic |
| AAATTAATGGAAATTGTCTT+CGG | 0.444249 | 1:-69812641 | MsG0180003898.01.T01:three_prime_UTR |
| TTTGGGTAGTAGCTTGGTTG+GGG | 0.445798 | 1:-69812793 | MsG0180003898.01.T01:three_prime_UTR |
| TAAGTATGTTGTCTCAATCA+AGG | 0.450290 | 1:-69814546 | MsG0180003898.01.T01:CDS |
| TAGGTAACCATTAGCATAGT+AGG | 0.453570 | 1:+69812976 | None:intergenic |
| GGGTGAGGAGAGCCCTTGAT+AGG | 0.454162 | 1:+69813590 | None:intergenic |
| TGCAGGTTGTGTTGGTACCT+TGG | 0.458215 | 1:+69812933 | None:intergenic |
| TGGGGAGTCGTTTATTTAGA+GGG | 0.465245 | 1:-69812775 | MsG0180003898.01.T01:three_prime_UTR |
| AGATCGGAGCTCCAATCAAA+TGG | 0.468483 | 1:+69813915 | None:intergenic |
| ATGCTAATGGTTACCTATGA+AGG | 0.471493 | 1:-69812970 | MsG0180003898.01.T01:CDS |
| TTCCTCCATGAGTAATCATC+AGG | 0.472648 | 1:+69813626 | None:intergenic |
| GCATGAGAGGCTGCCCTGCT+AGG | 0.472837 | 1:-69813026 | MsG0180003898.01.T01:CDS |
| TCTTTGGAATTGAGTTCAAA+CGG | 0.478409 | 1:-69814235 | MsG0180003898.01.T01:CDS |
| GAGATTGAAGGTGTGAAGAG+AGG | 0.479104 | 1:+69815116 | None:intergenic |
| GGATGAGCCTACTATGCTAA+TGG | 0.481224 | 1:-69812983 | MsG0180003898.01.T01:CDS |
| TTTGTTGCTGCAGCTGCTGT+TGG | 0.487273 | 1:+69814134 | None:intergenic |
| AAAATTAAGGCTTATGCCGC+TGG | 0.488025 | 1:+69814039 | None:intergenic |
| TTCCATGGGTTTGAGATTGA+AGG | 0.488676 | 1:+69815104 | None:intergenic |
| GAAGGGTTTCCAAGAGAAAG+TGG | 0.494949 | 1:+69814256 | None:intergenic |
| GCAAGCTTGTTGCTGATAGC+AGG | 0.495556 | 1:+69813659 | None:intergenic |
| CAACCAAGCTACTACCCAAA+AGG | 0.497245 | 1:+69812796 | None:intergenic |
| GATTACTCATGGAGGAAGTA+CGG | 0.498681 | 1:-69813620 | MsG0180003898.01.T01:CDS |
| GTATGTTATTAAACATTTCA+GGG | 0.504251 | 1:-69812670 | MsG0180003898.01.T01:three_prime_UTR |
| GTATTCTTATGTGTGTGTGA+TGG | 0.508109 | 1:-69815167 | MsG0180003898.01.T01:five_prime_UTR |
| TTGAACTCAATTCCAAAGAA+GGG | 0.509941 | 1:+69814239 | None:intergenic |
| GTACGGGCAGAAGCCTATCA+AGG | 0.510514 | 1:-69813603 | MsG0180003898.01.T01:CDS |
| CATGCATTTGCAGGTTGTGT+TGG | 0.511678 | 1:+69812925 | None:intergenic |
| GCTGTTGTTGATGTTTCCAT+GGG | 0.514488 | 1:+69815090 | None:intergenic |
| GACCTAGTAGACGACATTGT+TGG | 0.517470 | 1:+69813995 | None:intergenic |
| AAGGTGTGAAGAGAGGACTT+TGG | 0.523425 | 1:+69815123 | None:intergenic |
| AAACTGGTGAAGCTGTGAAT+AGG | 0.523498 | 1:-69814492 | MsG0180003898.01.T01:CDS |
| GTCTTCACAAATAGAATGAC+GGG | 0.526956 | 1:+69812887 | None:intergenic |
| ATTACCTCTTCTTTGAGCAA+TGG | 0.528866 | 1:+69813807 | None:intergenic |
| GAGGGAGTGATGAAGATCAC+TGG | 0.535239 | 1:-69812757 | MsG0180003898.01.T01:three_prime_UTR |
| TGACAACAACAACTTCATCA+AGG | 0.535436 | 1:-69815050 | MsG0180003898.01.T01:intron |
| TTGTCTAAGAAAGCAGTTTG+AGG | 0.538734 | 1:+69814388 | None:intergenic |
| ACAACAGCAACAAGATTCTA+GGG | 0.538954 | 1:-69815075 | MsG0180003898.01.T01:five_prime_UTR |
| TCCCTCCTGATGATTACTCA+TGG | 0.545497 | 1:-69813631 | MsG0180003898.01.T01:CDS |
| GAAGATCACTGGTTTAGTGC+TGG | 0.550783 | 1:-69812746 | MsG0180003898.01.T01:three_prime_UTR |
| GGAAGCGTGGCTAACGTGGA+TGG | 0.552072 | 1:-69813947 | MsG0180003898.01.T01:CDS |
| AATGCCATTGCTCAAAGAAG+AGG | 0.554797 | 1:-69813811 | MsG0180003898.01.T01:intron |
| ATATTTCAAGTGATGCGAGC+AGG | 0.556506 | 1:-69812832 | MsG0180003898.01.T01:three_prime_UTR |
| ATTTCCTCCTTGAGCATAGA+CGG | 0.557646 | 1:-69813968 | MsG0180003898.01.T01:CDS |
| ATTACTCATGGAGGAAGTAC+GGG | 0.557772 | 1:-69813619 | MsG0180003898.01.T01:CDS |
| GAATTCTGATCTGAAGAGAT+CGG | 0.560341 | 1:+69813899 | None:intergenic |
| CACGCTTCCGTCTATGCTCA+AGG | 0.561562 | 1:+69813961 | None:intergenic |
| AGACGGAAGCGTGGCTAACG+TGG | 0.565434 | 1:-69813951 | MsG0180003898.01.T01:CDS |
| CACCTTCAATCTCAAACCCA+TGG | 0.573317 | 1:-69815106 | MsG0180003898.01.T01:five_prime_UTR |
| TCTCAACATGCTTCCTAGCA+GGG | 0.575418 | 1:+69813013 | None:intergenic |
| TCAAGGGCTCTCCTCACCCT+AGG | 0.577561 | 1:-69813586 | MsG0180003898.01.T01:intron |
| ATGTTCTGCTAGAGGTGATG+AGG | 0.577879 | 1:-69813861 | MsG0180003898.01.T01:CDS |
| TATAAGTGCAGCAGCATGAG+AGG | 0.580000 | 1:-69813039 | MsG0180003898.01.T01:CDS |
| AAGTATGTTGTCTCAATCAA+GGG | 0.580385 | 1:-69814545 | MsG0180003898.01.T01:CDS |
| ATCAGAATTCACAGCACAAG+AGG | 0.581042 | 1:-69813886 | MsG0180003898.01.T01:CDS |
| TGCTATCAGCAACAAGCTTG+CGG | 0.581834 | 1:-69813657 | MsG0180003898.01.T01:CDS |
| CGGAGCTCCAATCAAATGGA+AGG | 0.586112 | 1:+69813919 | None:intergenic |
| GAAGCATGTTGAGAGGTGCT+TGG | 0.586233 | 1:-69813004 | MsG0180003898.01.T01:CDS |
| GCTTGTTGAGCAAGGTGAAG+CGG | 0.587298 | 1:+69814205 | None:intergenic |
| CTCCATGAGTAATCATCAGG+AGG | 0.604331 | 1:+69813629 | None:intergenic |
| CTGCAAATGCATGAACTGCA+TGG | 0.609869 | 1:-69812915 | MsG0180003898.01.T01:exon |
| GGTCTTCACAAATAGAATGA+CGG | 0.611645 | 1:+69812886 | None:intergenic |
| AACAGCAGCTGCAGCAACAA+AGG | 0.622186 | 1:-69814132 | MsG0180003898.01.T01:CDS |
| TGTTCTGCTAGAGGTGATGA+GGG | 0.623984 | 1:-69813860 | MsG0180003898.01.T01:CDS |
| AAGCTGAAATGATGTTCCGA+AGG | 0.624862 | 1:-69814066 | MsG0180003898.01.T01:CDS |
| AAGAGGAAATGTTCTGCTAG+AGG | 0.625674 | 1:-69813869 | MsG0180003898.01.T01:CDS |
| TTGATGCAGCTTGTTGAGCA+AGG | 0.628338 | 1:+69814197 | None:intergenic |
| TCCATGAGTAATCATCAGGA+GGG | 0.631195 | 1:+69813630 | None:intergenic |
| ATCTCAAGCCAATCACATAG+AGG | 0.631648 | 1:+69812865 | None:intergenic |
| GGTTGGACATACCTAGGGTG+AGG | 0.641458 | 1:+69813575 | None:intergenic |
| TACGGGCAGAAGCCTATCAA+GGG | 0.654538 | 1:-69813602 | MsG0180003898.01.T01:CDS |
| CTTGAGCATAGACGGAAGCG+TGG | 0.674043 | 1:-69813960 | MsG0180003898.01.T01:CDS |
| AGGCGAGCATAATCACGCCA+AGG | 0.679418 | 1:-69812950 | MsG0180003898.01.T01:CDS |
| ACACACACATAAGAATACAA+AGG | 0.680874 | 1:+69815172 | None:intergenic |
| CTCCTGATGATTACTCATGG+AGG | 0.692245 | 1:-69813628 | MsG0180003898.01.T01:CDS |
| TGGTGATGATGCTGTTGCTG+CGG | 0.703851 | 1:+69814154 | None:intergenic |
| CTGCTAGGAAGCATGTTGAG+AGG | 0.707257 | 1:-69813011 | MsG0180003898.01.T01:CDS |
| ATGTTCCGAAGGAACACCAG+CGG | 0.729358 | 1:-69814055 | MsG0180003898.01.T01:CDS |
| GCTTCCGTCTATGCTCAAGG+AGG | 0.768540 | 1:+69813964 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATATCATATTACAA+TGG | + | Chr1:69814138-69814157 | None:intergenic | 10.0% |
| !!! | AAATAAAAATCCTATTTTTG+CGG | - | Chr1:69813040-69813059 | MsG0180003898.01.T01:CDS | 15.0% |
| !!! | TTATTTTTTACTTGTTTCTT+AGG | - | Chr1:69812633-69812652 | MsG0180003898.01.T01:three_prime_UTR | 15.0% |
| !! | AAATTAATGGAAATTGTCTT+CGG | - | Chr1:69815224-69815243 | MsG0180003898.01.T01:five_prime_UTR | 20.0% |
| !! | AGTATGTTATTAAACATTTC+AGG | - | Chr1:69815194-69815213 | MsG0180003898.01.T01:five_prime_UTR | 20.0% |
| !! | GTATGTTATTAAACATTTCA+GGG | - | Chr1:69815195-69815214 | MsG0180003898.01.T01:five_prime_UTR | 20.0% |
| !! | TGTAATGAAAATTACAAACA+TGG | + | Chr1:69814582-69814601 | None:intergenic | 20.0% |
| !! | TTAAATCTCAAATAGCAAAA+CGG | + | Chr1:69814314-69814333 | None:intergenic | 20.0% |
| !!! | AATTTTATTGATTCGATTCA+AGG | - | Chr1:69814332-69814351 | MsG0180003898.01.T01:CDS | 20.0% |
| !!! | AATTTTGTTTTTTCGAATCA+AGG | - | Chr1:69815266-69815285 | MsG0180003898.01.T01:five_prime_UTR | 20.0% |
| !!! | ACATGTTCAAGTTAAAAAAA+AGG | + | Chr1:69814639-69814658 | None:intergenic | 20.0% |
| !!! | CATGTTCAAGTTAAAAAAAA+GGG | + | Chr1:69814638-69814657 | None:intergenic | 20.0% |
| !!! | CTTTTTAATGTAATGTTGAA+AGG | - | Chr1:69812922-69812941 | MsG0180003898.01.T01:exon | 20.0% |
| !!! | GTTAATTTCTGTTACTTTAA+AGG | - | Chr1:69814103-69814122 | MsG0180003898.01.T01:CDS | 20.0% |
| !!! | TTTTTTGTCACATGAAAATT+GGG | - | Chr1:69812868-69812887 | MsG0180003898.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTTTTGTCACATGAAAAT+TGG | - | Chr1:69812867-69812886 | MsG0180003898.01.T01:three_prime_UTR | 20.0% |
| ! | AAAATTACAAACATGGACAA+AGG | + | Chr1:69814575-69814594 | None:intergenic | 25.0% |
| ! | AAAATTATTTAAATCCCCAC+AGG | + | Chr1:69814502-69814521 | None:intergenic | 25.0% |
| ! | ATCAATGTCTGATATATTTG+TGG | - | Chr1:69813124-69813143 | MsG0180003898.01.T01:intron | 25.0% |
| ! | ATTACTTGATTCTGATTCAT+GGG | - | Chr1:69812949-69812968 | MsG0180003898.01.T01:CDS | 25.0% |
| ! | CATTATTGTCAATCAAATGA+AGG | - | Chr1:69814721-69814740 | MsG0180003898.01.T01:intron | 25.0% |
| ! | TATTACTTGATTCTGATTCA+TGG | - | Chr1:69812948-69812967 | MsG0180003898.01.T01:CDS | 25.0% |
| ! | TGACAATAATGTGACAATAA+TGG | + | Chr1:69814712-69814731 | None:intergenic | 25.0% |
| ! | TGGATATGTAATATGTTGAT+TGG | - | Chr1:69814532-69814551 | MsG0180003898.01.T01:CDS | 25.0% |
| !! | ATGATGTTTCTTTTGCAATT+TGG | + | Chr1:69813504-69813523 | None:intergenic | 25.0% |
| !! | TCTTATGGTTGATACATTAA+TGG | - | Chr1:69814081-69814100 | MsG0180003898.01.T01:CDS | 25.0% |
| !! | TGATGTTTCTTTTGCAATTT+GGG | + | Chr1:69813503-69813522 | None:intergenic | 25.0% |
| !! | TGTGGGGATTTAAATAATTT+TGG | - | Chr1:69814501-69814520 | MsG0180003898.01.T01:CDS | 25.0% |
| !! | TTGAGTAAAGTGAACATTTT+TGG | + | Chr1:69813538-69813557 | None:intergenic | 25.0% |
| !! | TTTTATAGATAGAAAGAGAG+AGG | - | Chr1:69813236-69813255 | MsG0180003898.01.T01:intron | 25.0% |
| !!! | AAAATGGGATTTTTTTCATC+TGG | - | Chr1:69813078-69813097 | MsG0180003898.01.T01:intron | 25.0% |
| !!! | AAATAATTTTGGTCTATGTG+TGG | - | Chr1:69814512-69814531 | MsG0180003898.01.T01:CDS | 25.0% |
| !!! | AAATGGGATTTTTTTCATCT+GGG | - | Chr1:69813079-69813098 | MsG0180003898.01.T01:intron | 25.0% |
| !!! | TGTACTTTGATGTTTTTTGT+TGG | - | Chr1:69812844-69812863 | MsG0180003898.01.T01:three_prime_UTR | 25.0% |
| AAGTATGTTGTCTCAATCAA+GGG | - | Chr1:69813320-69813339 | MsG0180003898.01.T01:intron | 30.0% | |
| AATAACTTTGTGTTCTTGAC+AGG | - | Chr1:69814153-69814172 | MsG0180003898.01.T01:CDS | 30.0% | |
| ACACACACATAAGAATACAA+AGG | + | Chr1:69812696-69812715 | None:intergenic | 30.0% | |
| AGGAATTTAACTGTTGAAAC+TGG | - | Chr1:69813357-69813376 | MsG0180003898.01.T01:intron | 30.0% | |
| CAAAGAAGAGGTAATTCTTA+TGG | - | Chr1:69814066-69814085 | MsG0180003898.01.T01:CDS | 30.0% | |
| GAGCATCAAAATTGCAAAAT+CGG | + | Chr1:69814670-69814689 | None:intergenic | 30.0% | |
| TAAGTATGTTGTCTCAATCA+AGG | - | Chr1:69813319-69813338 | MsG0180003898.01.T01:intron | 30.0% | |
| TAGAGTGAAGAGATCAATTA+AGG | - | Chr1:69814181-69814200 | MsG0180003898.01.T01:CDS | 30.0% | |
| TTCAGGGTTCTCTAAATTAA+TGG | - | Chr1:69815211-69815230 | MsG0180003898.01.T01:five_prime_UTR | 30.0% | |
| TTCAGTTCATGAGAAGATAA+AGG | + | Chr1:69813001-69813020 | None:intergenic | 30.0% | |
| TTCATTGTCTGGTGAAAAAT+GGG | - | Chr1:69813063-69813082 | MsG0180003898.01.T01:intron | 30.0% | |
| TTGAACTCAATTCCAAAGAA+GGG | + | Chr1:69813629-69813648 | None:intergenic | 30.0% | |
| TTTGAACTCAATTCCAAAGA+AGG | + | Chr1:69813630-69813649 | None:intergenic | 30.0% | |
| ! | AAGAGAAAGTGGATTTCTTA+GGG | + | Chr1:69813601-69813620 | None:intergenic | 30.0% |
| ! | GAGATGCTTTCTTTGTATTT+TGG | - | Chr1:69813153-69813172 | MsG0180003898.01.T01:intron | 30.0% |
| !! | AACTATTTTGTTATGCTGCT+TGG | - | Chr1:69814407-69814426 | MsG0180003898.01.T01:CDS | 30.0% |
| !! | CATAAGCCTTAATTTTGACA+AGG | - | Chr1:69813833-69813852 | MsG0180003898.01.T01:CDS | 30.0% |
| !! | GTCTTGATTTTGTTTCTTCA+GGG | - | Chr1:69814798-69814817 | MsG0180003898.01.T01:intron | 30.0% |
| !! | TAGTAGCCTTGTCAAAATTA+AGG | + | Chr1:69813842-69813861 | None:intergenic | 30.0% |
| !! | TCTTGATTTTGTTTCTTCAG+GGG | - | Chr1:69814799-69814818 | MsG0180003898.01.T01:intron | 30.0% |
| !! | TCTTTGGAATTGAGTTCAAA+CGG | - | Chr1:69813630-69813649 | MsG0180003898.01.T01:CDS | 30.0% |
| !! | TGTCTTGATTTTGTTTCTTC+AGG | - | Chr1:69814797-69814816 | MsG0180003898.01.T01:intron | 30.0% |
| !! | TTTTGCAATTTTGATGCTCT+AGG | - | Chr1:69814671-69814690 | MsG0180003898.01.T01:intron | 30.0% |
| AAAAAGGGCTATCGAACATA+TGG | + | Chr1:69814623-69814642 | None:intergenic | 35.0% | |
| AAAGTTGTGTCTTTGCTTCA+TGG | - | Chr1:69813402-69813421 | MsG0180003898.01.T01:intron | 35.0% | |
| AACAACAGCAACAAGATTCT+AGG | - | Chr1:69812789-69812808 | MsG0180003898.01.T01:three_prime_UTR | 35.0% | |
| AAGAAAGCAGTTTGAGGATA+AGG | + | Chr1:69813474-69813493 | None:intergenic | 35.0% | |
| ACAACAGCAACAAGATTCTA+GGG | - | Chr1:69812790-69812809 | MsG0180003898.01.T01:three_prime_UTR | 35.0% | |
| AGACAATGAACCGCAAAAAT+AGG | + | Chr1:69813053-69813072 | None:intergenic | 35.0% | |
| ATCTCAAATAGCAAAACGGT+TGG | + | Chr1:69814310-69814329 | None:intergenic | 35.0% | |
| ATGCTAATGGTTACCTATGA+AGG | - | Chr1:69814895-69814914 | MsG0180003898.01.T01:intron | 35.0% | |
| ATTACCTCTTCTTTGAGCAA+TGG | + | Chr1:69814061-69814080 | None:intergenic | 35.0% | |
| CAAAATTCAGTTCAGGAACT+TGG | - | Chr1:69813570-69813589 | MsG0180003898.01.T01:intron | 35.0% | |
| CTAAGAAATCCACTTTCTCT+TGG | - | Chr1:69813600-69813619 | MsG0180003898.01.T01:CDS | 35.0% | |
| CTATCCTCAAAATTCAGTTC+AGG | - | Chr1:69813563-69813582 | MsG0180003898.01.T01:intron | 35.0% | |
| GAATTCTGATCTGAAGAGAT+CGG | + | Chr1:69813969-69813988 | None:intergenic | 35.0% | |
| GGTCTTCACAAATAGAATGA+CGG | + | Chr1:69814982-69815001 | None:intergenic | 35.0% | |
| GTATTCTTATGTGTGTGTGA+TGG | - | Chr1:69812698-69812717 | MsG0180003898.01.T01:three_prime_UTR | 35.0% | |
| GTCTTCACAAATAGAATGAC+GGG | + | Chr1:69814981-69815000 | None:intergenic | 35.0% | |
| GTTCATTGTCTGGTGAAAAA+TGG | - | Chr1:69813062-69813081 | MsG0180003898.01.T01:intron | 35.0% | |
| GTTTGGATCATTCAAGAGTT+AGG | - | Chr1:69813424-69813443 | MsG0180003898.01.T01:intron | 35.0% | |
| TAGAAAGAGAGAGGCTAAAA+TGG | - | Chr1:69813245-69813264 | MsG0180003898.01.T01:intron | 35.0% | |
| TAGGTAACCATTAGCATAGT+AGG | + | Chr1:69814892-69814911 | None:intergenic | 35.0% | |
| TGACAACAACAACTTCATCA+AGG | - | Chr1:69812815-69812834 | MsG0180003898.01.T01:three_prime_UTR | 35.0% | |
| TGGAAATTGTCTTCGGAAAA+TGG | - | Chr1:69815231-69815250 | MsG0180003898.01.T01:five_prime_UTR | 35.0% | |
| TTGTCTAAGAAAGCAGTTTG+AGG | + | Chr1:69813480-69813499 | None:intergenic | 35.0% | |
| ! | AGTGCTGGAGTATGTAAAAT+TGG | - | Chr1:69815134-69815153 | MsG0180003898.01.T01:five_prime_UTR | 35.0% |
| ! | AGTTCCTGAACTGAATTTTG+AGG | + | Chr1:69813570-69813589 | None:intergenic | 35.0% |
| ! | CAAGAGAAAGTGGATTTCTT+AGG | + | Chr1:69813602-69813621 | None:intergenic | 35.0% |
| !! | CTGAACTGAATTTTGAGGAT+AGG | + | Chr1:69813565-69813584 | None:intergenic | 35.0% |
| !! | CTTCTTTTGATTCAGGAACT+TGG | - | Chr1:69813182-69813201 | MsG0180003898.01.T01:intron | 35.0% |
| !! | CTTGATTTTGTTTCTTCAGG+GGG | - | Chr1:69814800-69814819 | MsG0180003898.01.T01:intron | 35.0% |
| !! | CTTTGGAATTGAGTTCAAAC+GGG | - | Chr1:69813631-69813650 | MsG0180003898.01.T01:CDS | 35.0% |
| !! | TATTTTTGCGGTTCATTGTC+TGG | - | Chr1:69813052-69813071 | MsG0180003898.01.T01:intron | 35.0% |
| !!! | AGTGAACATTTTTGGTGTGA+TGG | + | Chr1:69813530-69813549 | None:intergenic | 35.0% |
| AAAACGGTTGGACATACCTA+GGG | + | Chr1:69814298-69814317 | None:intergenic | 40.0% | |
| AAAATTAAGGCTTATGCCGC+TGG | + | Chr1:69813829-69813848 | None:intergenic | 40.0% | |
| AAACTGGTGAAGCTGTGAAT+AGG | - | Chr1:69813373-69813392 | MsG0180003898.01.T01:intron | 40.0% | |
| AAGAGGAAATGTTCTGCTAG+AGG | - | Chr1:69813996-69814015 | MsG0180003898.01.T01:CDS | 40.0% | |
| AAGCTGAAATGATGTTCCGA+AGG | - | Chr1:69813799-69813818 | MsG0180003898.01.T01:intron | 40.0% | |
| AATGCCATTGCTCAAAGAAG+AGG | - | Chr1:69814054-69814073 | MsG0180003898.01.T01:CDS | 40.0% | |
| ATCAGAATTCACAGCACAAG+AGG | - | Chr1:69813979-69813998 | MsG0180003898.01.T01:CDS | 40.0% | |
| ATCTCAAGCCAATCACATAG+AGG | + | Chr1:69815003-69815022 | None:intergenic | 40.0% | |
| ATTTCCTCCTTGAGCATAGA+CGG | - | Chr1:69813897-69813916 | MsG0180003898.01.T01:CDS | 40.0% | |
| CAAGGGATCAAGTTCATCAT+AGG | - | Chr1:69813337-69813356 | MsG0180003898.01.T01:intron | 40.0% | |
| GATTACTCATGGAGGAAGTA+CGG | - | Chr1:69814245-69814264 | MsG0180003898.01.T01:CDS | 40.0% | |
| GCTGTTGTTGATGTTTCCAT+GGG | + | Chr1:69812778-69812797 | None:intergenic | 40.0% | |
| GGAAGTTCCTTCCATTTGAT+TGG | - | Chr1:69813939-69813958 | MsG0180003898.01.T01:CDS | 40.0% | |
| TCCATGAGTAATCATCAGGA+GGG | + | Chr1:69814238-69814257 | None:intergenic | 40.0% | |
| TGCTGTTGTTGATGTTTCCA+TGG | + | Chr1:69812779-69812798 | None:intergenic | 40.0% | |
| TGGGGAGTCGTTTATTTAGA+GGG | - | Chr1:69815090-69815109 | MsG0180003898.01.T01:five_prime_UTR | 40.0% | |
| TGTGAAGACCTCTATGTGAT+TGG | - | Chr1:69814992-69815011 | MsG0180003898.01.T01:intron | 40.0% | |
| TGTGTCTTTGCTTCATGGTT+TGG | - | Chr1:69813407-69813426 | MsG0180003898.01.T01:intron | 40.0% | |
| TTCCTCCATGAGTAATCATC+AGG | + | Chr1:69814242-69814261 | None:intergenic | 40.0% | |
| TTCTCTTGGAAACCCTTCTT+TGG | - | Chr1:69813614-69813633 | MsG0180003898.01.T01:CDS | 40.0% | |
| TTGGGGAGTCGTTTATTTAG+AGG | - | Chr1:69815089-69815108 | MsG0180003898.01.T01:five_prime_UTR | 40.0% | |
| ! | ATATTTCAAGTGATGCGAGC+AGG | - | Chr1:69815033-69815052 | MsG0180003898.01.T01:intron | 40.0% |
| ! | ATTACTCATGGAGGAAGTAC+GGG | - | Chr1:69814246-69814265 | MsG0180003898.01.T01:CDS | 40.0% |
| ! | GACTGCAGATTTTGCCTTTT+GGG | - | Chr1:69815055-69815074 | MsG0180003898.01.T01:five_prime_UTR | 40.0% |
| ! | TGATTGATGTACTAGCCTGT+GGG | - | Chr1:69814484-69814503 | MsG0180003898.01.T01:CDS | 40.0% |
| ! | TTCCATGGGTTTGAGATTGA+AGG | + | Chr1:69812764-69812783 | None:intergenic | 40.0% |
| !! | GTGTGTGCTTCTTTTGATTC+AGG | - | Chr1:69813175-69813194 | MsG0180003898.01.T01:intron | 40.0% |
| !! | TTTTGGGTAGTAGCTTGGTT+GGG | - | Chr1:69815071-69815090 | MsG0180003898.01.T01:five_prime_UTR | 40.0% |
| AAGGTGTGAAGAGAGGACTT+TGG | + | Chr1:69812745-69812764 | None:intergenic | 45.0% | |
| AGATCGGAGCTCCAATCAAA+TGG | + | Chr1:69813953-69813972 | None:intergenic | 45.0% | |
| ATGTTCTGCTAGAGGTGATG+AGG | - | Chr1:69814004-69814023 | MsG0180003898.01.T01:CDS | 45.0% | |
| CAAAACGGTTGGACATACCT+AGG | + | Chr1:69814299-69814318 | None:intergenic | 45.0% | |
| CAACCAAGCTACTACCCAAA+AGG | + | Chr1:69815072-69815091 | None:intergenic | 45.0% | |
| CACCAACAATGTCGTCTACT+AGG | - | Chr1:69813868-69813887 | MsG0180003898.01.T01:CDS | 45.0% | |
| CACCTTCAATCTCAAACCCA+TGG | - | Chr1:69812759-69812778 | MsG0180003898.01.T01:three_prime_UTR | 45.0% | |
| CATGCAGTTCATGCATTTGC+AGG | + | Chr1:69814952-69814971 | None:intergenic | 45.0% | |
| CATGCATTTGCAGGTTGTGT+TGG | + | Chr1:69814943-69814962 | None:intergenic | 45.0% | |
| CTCCATGAGTAATCATCAGG+AGG | + | Chr1:69814239-69814258 | None:intergenic | 45.0% | |
| CTCCTGATGATTACTCATGG+AGG | - | Chr1:69814237-69814256 | MsG0180003898.01.T01:CDS | 45.0% | |
| CTGCAAATGCATGAACTGCA+TGG | - | Chr1:69814950-69814969 | MsG0180003898.01.T01:intron | 45.0% | |
| GAAGGGTTTCCAAGAGAAAG+TGG | + | Chr1:69813612-69813631 | None:intergenic | 45.0% | |
| GACCTAGTAGACGACATTGT+TGG | + | Chr1:69813873-69813892 | None:intergenic | 45.0% | |
| GGATGAGCCTACTATGCTAA+TGG | - | Chr1:69814882-69814901 | MsG0180003898.01.T01:intron | 45.0% | |
| GTGATTATGCTCGCCTTCAT+AGG | + | Chr1:69814911-69814930 | None:intergenic | 45.0% | |
| TATAAGTGCAGCAGCATGAG+AGG | - | Chr1:69814826-69814845 | MsG0180003898.01.T01:intron | 45.0% | |
| TCCCTCCTGATGATTACTCA+TGG | - | Chr1:69814234-69814253 | MsG0180003898.01.T01:CDS | 45.0% | |
| TCTCAACATGCTTCCTAGCA+GGG | + | Chr1:69814855-69814874 | None:intergenic | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | - | Chr1:69814208-69814227 | MsG0180003898.01.T01:CDS | 45.0% | |
| TGTTCTGCTAGAGGTGATGA+GGG | - | Chr1:69814005-69814024 | MsG0180003898.01.T01:CDS | 45.0% | |
| TTTGGGTAGTAGCTTGGTTG+GGG | - | Chr1:69815072-69815091 | MsG0180003898.01.T01:five_prime_UTR | 45.0% | |
| ! | CTGATTGATGTACTAGCCTG+TGG | - | Chr1:69814483-69814502 | MsG0180003898.01.T01:CDS | 45.0% |
| ! | GAGATTGAAGGTGTGAAGAG+AGG | + | Chr1:69812752-69812771 | None:intergenic | 45.0% |
| ! | GATTGATGTACTAGCCTGTG+GGG | - | Chr1:69814485-69814504 | MsG0180003898.01.T01:CDS | 45.0% |
| ! | GGACTGCAGATTTTGCCTTT+TGG | - | Chr1:69815054-69815073 | MsG0180003898.01.T01:five_prime_UTR | 45.0% |
| !! | CTTTTGGGTAGTAGCTTGGT+TGG | - | Chr1:69815070-69815089 | MsG0180003898.01.T01:five_prime_UTR | 45.0% |
| !! | GAAGATCACTGGTTTAGTGC+TGG | - | Chr1:69815119-69815138 | MsG0180003898.01.T01:five_prime_UTR | 45.0% |
| !! | TTGATGCAGCTTGTTGAGCA+AGG | + | Chr1:69813671-69813690 | None:intergenic | 45.0% |
| !! | TTGCCTTTTGGGTAGTAGCT+TGG | - | Chr1:69815066-69815085 | MsG0180003898.01.T01:five_prime_UTR | 45.0% |
| !!! | ATTTTTATTTTTTTTATCTT+TGG | - | Chr1:69812898-69812917 | MsG0180003898.01.T01:three_prime_UTR | 5.0% |
| AACAGCAGCTGCAGCAACAA+AGG | - | Chr1:69813733-69813752 | MsG0180003898.01.T01:intron | 50.0% | |
| ATGTTCCGAAGGAACACCAG+CGG | - | Chr1:69813810-69813829 | MsG0180003898.01.T01:intron | 50.0% | |
| CGGAGCTCCAATCAAATGGA+AGG | + | Chr1:69813949-69813968 | None:intergenic | 50.0% | |
| CTCTCAACATGCTTCCTAGC+AGG | + | Chr1:69814856-69814875 | None:intergenic | 50.0% | |
| GAGGGAGTGATGAAGATCAC+TGG | - | Chr1:69815108-69815127 | MsG0180003898.01.T01:five_prime_UTR | 50.0% | |
| TACGGGCAGAAGCCTATCAA+GGG | - | Chr1:69814263-69814282 | MsG0180003898.01.T01:CDS | 50.0% | |
| TTATGCCGCTGGTGTTCCTT+CGG | + | Chr1:69813818-69813837 | None:intergenic | 50.0% | |
| TTTGTTGCTGCAGCTGCTGT+TGG | + | Chr1:69813734-69813753 | None:intergenic | 50.0% | |
| ! | CTGCTAGGAAGCATGTTGAG+AGG | - | Chr1:69814854-69814873 | MsG0180003898.01.T01:intron | 50.0% |
| ! | GCTTGTTGAGCAAGGTGAAG+CGG | + | Chr1:69813663-69813682 | None:intergenic | 50.0% |
| ! | TGCAGGTTGTGTTGGTACCT+TGG | + | Chr1:69814935-69814954 | None:intergenic | 50.0% |
| ! | TGGTGATGATGCTGTTGCTG+CGG | + | Chr1:69813714-69813733 | None:intergenic | 50.0% |
| !! | GAAGCATGTTGAGAGGTGCT+TGG | - | Chr1:69814861-69814880 | MsG0180003898.01.T01:intron | 50.0% |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | + | Chr1:69814209-69814228 | None:intergenic | 50.0% |
| AGGCGAGCATAATCACGCCA+AGG | - | Chr1:69814915-69814934 | MsG0180003898.01.T01:intron | 55.0% | |
| CACGCTTCCGTCTATGCTCA+AGG | + | Chr1:69813907-69813926 | None:intergenic | 55.0% | |
| CTTGAGCATAGACGGAAGCG+TGG | - | Chr1:69813905-69813924 | MsG0180003898.01.T01:CDS | 55.0% | |
| GCTTCCGTCTATGCTCAAGG+AGG | + | Chr1:69813904-69813923 | None:intergenic | 55.0% | |
| GGTTGGACATACCTAGGGTG+AGG | + | Chr1:69814293-69814312 | None:intergenic | 55.0% | |
| GTACGGGCAGAAGCCTATCA+AGG | - | Chr1:69814262-69814281 | MsG0180003898.01.T01:CDS | 55.0% | |
| GGGTGAGGAGAGCCCTTGAT+AGG | + | Chr1:69814278-69814297 | None:intergenic | 60.0% | |
| TCAAGGGCTCTCCTCACCCT+AGG | - | Chr1:69814279-69814298 | MsG0180003898.01.T01:CDS | 60.0% | |
| ! | AGACGGAAGCGTGGCTAACG+TGG | - | Chr1:69813914-69813933 | MsG0180003898.01.T01:CDS | 60.0% |
| ! | GGAAGCGTGGCTAACGTGGA+TGG | - | Chr1:69813918-69813937 | MsG0180003898.01.T01:CDS | 60.0% |
| GCATGAGAGGCTGCCCTGCT+AGG | - | Chr1:69814839-69814858 | MsG0180003898.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 69812582 | 69815305 | 69812582 | ID=MsG0180003898.01;Name=MsG0180003898.01 |
| Chr1 | mRNA | 69812582 | 69815305 | 69812582 | ID=MsG0180003898.01.T01;Parent=MsG0180003898.01;Name=MsG0180003898.01.T01;_AED=0.20;_eAED=0.20;_QI=275|1|1|1|0.66|0.5|4|342|360 |
| Chr1 | exon | 69812582 | 69813068 | 69812582 | ID=MsG0180003898.01.T01:exon:24501;Parent=MsG0180003898.01.T01 |
| Chr1 | exon | 69813587 | 69813712 | 69813587 | ID=MsG0180003898.01.T01:exon:24500;Parent=MsG0180003898.01.T01 |
| Chr1 | exon | 69813812 | 69814643 | 69813812 | ID=MsG0180003898.01.T01:exon:24499;Parent=MsG0180003898.01.T01 |
| Chr1 | exon | 69815051 | 69815305 | 69815051 | ID=MsG0180003898.01.T01:exon:24498;Parent=MsG0180003898.01.T01 |
| Chr1 | five_prime_UTR | 69815051 | 69815305 | 69815051 | ID=MsG0180003898.01.T01:five_prime_utr;Parent=MsG0180003898.01.T01 |
| Chr1 | five_prime_UTR | 69814624 | 69814643 | 69814624 | ID=MsG0180003898.01.T01:five_prime_utr;Parent=MsG0180003898.01.T01 |
| Chr1 | CDS | 69813812 | 69814623 | 69813812 | ID=MsG0180003898.01.T01:cds;Parent=MsG0180003898.01.T01 |
| Chr1 | CDS | 69813587 | 69813712 | 69813587 | ID=MsG0180003898.01.T01:cds;Parent=MsG0180003898.01.T01 |
| Chr1 | CDS | 69812924 | 69813068 | 69812924 | ID=MsG0180003898.01.T01:cds;Parent=MsG0180003898.01.T01 |
| Chr1 | three_prime_UTR | 69812582 | 69812923 | 69812582 | ID=MsG0180003898.01.T01:three_prime_utr;Parent=MsG0180003898.01.T01 |
| Gene Sequence |
| Protein sequence |
