Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004893.01.T02 | XP_013469212.1 | 96 | 75 | 3 | 0 | 1 | 75 | 28 | 102 | 4.77E-44 | 147 |
MsG0180004893.01.T01 | XP_013469212.1 | 96.078 | 102 | 4 | 0 | 1 | 102 | 1 | 102 | 4.49E-65 | 201 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004893.01.T01 | Q9LYC8 | 62.745 | 102 | 38 | 0 | 1 | 102 | 1 | 102 | 2.92E-47 | 149 |
MsG0180004893.01.T02 | Q9LYC8 | 62.162 | 74 | 28 | 0 | 2 | 75 | 29 | 102 | 2.76E-31 | 107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004893.01.T01 | A0A072VYV0 | 96.078 | 102 | 4 | 0 | 1 | 102 | 1 | 102 | 2.14e-65 | 201 |
MsG0180004893.01.T02 | A0A072VYV0 | 96.000 | 75 | 3 | 0 | 1 | 75 | 28 | 102 | 2.28e-44 | 147 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004893.01 | MsG0180004894.01 | 0.983841 | 7.382208e-159 | 2.496830e-152 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004893.01.T02 | MTR_1g088905 | 96.000 | 75 | 3 | 0 | 1 | 75 | 28 | 102 | 5.78e-48 | 147 |
MsG0180004893.01.T02 | MTR_7g108250 | 78.378 | 74 | 16 | 0 | 2 | 75 | 29 | 102 | 2.77e-41 | 130 |
MsG0180004893.01.T02 | MTR_2g019900 | 56.757 | 74 | 32 | 0 | 2 | 75 | 29 | 102 | 1.63e-28 | 98.2 |
MsG0180004893.01.T02 | MTR_4g119050 | 57.333 | 75 | 31 | 1 | 2 | 75 | 29 | 103 | 3.61e-26 | 92.4 |
MsG0180004893.01.T02 | MTR_4g119030 | 57.333 | 75 | 31 | 1 | 2 | 75 | 29 | 103 | 3.61e-26 | 92.4 |
MsG0180004893.01.T02 | MTR_4g119040 | 57.333 | 75 | 31 | 1 | 2 | 75 | 29 | 103 | 3.61e-26 | 92.4 |
MsG0180004893.01.T02 | MTR_1g088895 | 55.405 | 74 | 33 | 0 | 2 | 75 | 29 | 102 | 4.63e-26 | 92.4 |
MsG0180004893.01.T02 | MTR_7g108260 | 58.333 | 72 | 30 | 0 | 3 | 74 | 30 | 101 | 1.28e-24 | 88.6 |
MsG0180004893.01.T02 | MTR_2g019950 | 55.882 | 68 | 30 | 0 | 8 | 75 | 35 | 102 | 6.46e-23 | 84.3 |
MsG0180004893.01.T02 | MTR_1g088910 | 52.055 | 73 | 35 | 0 | 3 | 75 | 30 | 102 | 4.48e-22 | 82.0 |
MsG0180004893.01.T02 | MTR_7g108220 | 50.000 | 74 | 36 | 1 | 3 | 75 | 30 | 103 | 2.65e-20 | 77.4 |
MsG0180004893.01.T02 | MTR_7g108210 | 48.649 | 74 | 37 | 1 | 3 | 75 | 30 | 103 | 1.77e-19 | 75.5 |
MsG0180004893.01.T02 | MTR_7g022690 | 42.667 | 75 | 42 | 1 | 2 | 75 | 58 | 132 | 3.76e-17 | 70.5 |
MsG0180004893.01.T02 | MTR_7g026770 | 51.471 | 68 | 32 | 1 | 8 | 74 | 56 | 123 | 8.08e-17 | 72.4 |
MsG0180004893.01.T02 | MTR_7g022710 | 40.000 | 75 | 44 | 1 | 2 | 75 | 58 | 132 | 9.34e-17 | 69.3 |
MsG0180004893.01.T02 | MTR_7g022550 | 40.000 | 75 | 44 | 1 | 2 | 75 | 58 | 132 | 6.02e-16 | 67.4 |
MsG0180004893.01.T02 | MTR_1g088925 | 40.000 | 65 | 39 | 0 | 3 | 67 | 30 | 94 | 9.47e-16 | 65.9 |
MsG0180004893.01.T02 | MTR_1g088920 | 41.538 | 65 | 38 | 0 | 3 | 67 | 30 | 94 | 9.78e-16 | 65.9 |
MsG0180004893.01.T02 | MTR_7g108200 | 41.538 | 65 | 38 | 0 | 3 | 67 | 30 | 94 | 1.87e-14 | 62.8 |
MsG0180004893.01.T02 | MTR_2g048970 | 43.243 | 74 | 38 | 1 | 6 | 75 | 60 | 133 | 3.24e-13 | 60.5 |
MsG0180004893.01.T02 | MTR_3g077570 | 42.254 | 71 | 41 | 0 | 3 | 73 | 47 | 117 | 1.00e-12 | 58.9 |
MsG0180004893.01.T02 | MTR_2g090755 | 39.474 | 76 | 41 | 2 | 3 | 75 | 67 | 140 | 2.54e-12 | 58.2 |
MsG0180004893.01.T02 | MTR_3g077560 | 40.845 | 71 | 42 | 0 | 3 | 73 | 50 | 120 | 3.46e-12 | 57.4 |
MsG0180004893.01.T02 | MTR_2g014760 | 35.616 | 73 | 47 | 0 | 3 | 75 | 55 | 127 | 4.15e-12 | 57.4 |
MsG0180004893.01.T02 | MTR_5g077550 | 36.000 | 75 | 46 | 1 | 3 | 75 | 49 | 123 | 7.10e-11 | 53.9 |
MsG0180004893.01.T01 | MTR_1g088905 | 96.078 | 102 | 4 | 0 | 1 | 102 | 1 | 102 | 5.44e-69 | 201 |
MsG0180004893.01.T01 | MTR_7g108250 | 76.471 | 102 | 24 | 0 | 1 | 102 | 1 | 102 | 6.17e-58 | 174 |
MsG0180004893.01.T01 | MTR_4g119050 | 58.252 | 103 | 42 | 1 | 1 | 102 | 1 | 103 | 5.23e-42 | 133 |
MsG0180004893.01.T01 | MTR_4g119030 | 58.252 | 103 | 42 | 1 | 1 | 102 | 1 | 103 | 5.23e-42 | 133 |
MsG0180004893.01.T01 | MTR_4g119040 | 58.252 | 103 | 42 | 1 | 1 | 102 | 1 | 103 | 5.23e-42 | 133 |
MsG0180004893.01.T01 | MTR_2g019900 | 54.902 | 102 | 46 | 0 | 1 | 102 | 1 | 102 | 1.54e-41 | 132 |
MsG0180004893.01.T01 | MTR_1g088895 | 53.922 | 102 | 47 | 0 | 1 | 102 | 1 | 102 | 4.91e-39 | 126 |
MsG0180004893.01.T01 | MTR_7g108260 | 55.446 | 101 | 45 | 0 | 1 | 101 | 1 | 101 | 5.04e-38 | 123 |
MsG0180004893.01.T01 | MTR_2g019950 | 53.922 | 102 | 47 | 0 | 1 | 102 | 1 | 102 | 3.74e-36 | 119 |
MsG0180004893.01.T01 | MTR_1g088910 | 50.000 | 102 | 51 | 0 | 1 | 102 | 1 | 102 | 1.98e-32 | 109 |
MsG0180004893.01.T01 | MTR_7g108220 | 48.544 | 103 | 52 | 1 | 1 | 102 | 1 | 103 | 1.19e-30 | 105 |
MsG0180004893.01.T01 | MTR_7g108210 | 47.573 | 103 | 53 | 1 | 1 | 102 | 1 | 103 | 6.94e-30 | 102 |
MsG0180004893.01.T01 | MTR_7g022690 | 43.689 | 103 | 57 | 1 | 1 | 102 | 30 | 132 | 2.07e-27 | 97.8 |
MsG0180004893.01.T01 | MTR_7g026770 | 48.544 | 103 | 52 | 1 | 1 | 102 | 22 | 124 | 5.58e-27 | 100 |
MsG0180004893.01.T01 | MTR_7g022710 | 41.748 | 103 | 59 | 1 | 1 | 102 | 30 | 132 | 5.70e-27 | 96.7 |
MsG0180004893.01.T01 | MTR_1g088920 | 41.489 | 94 | 55 | 0 | 1 | 94 | 1 | 94 | 1.11e-26 | 94.7 |
MsG0180004893.01.T01 | MTR_7g108200 | 43.617 | 94 | 53 | 0 | 1 | 94 | 1 | 94 | 1.22e-26 | 94.7 |
MsG0180004893.01.T01 | MTR_1g088925 | 39.362 | 94 | 57 | 0 | 1 | 94 | 1 | 94 | 1.57e-26 | 94.4 |
MsG0180004893.01.T01 | MTR_7g022550 | 40.777 | 103 | 60 | 1 | 1 | 102 | 30 | 132 | 4.12e-25 | 91.7 |
MsG0180004893.01.T01 | MTR_2g090755 | 38.462 | 104 | 59 | 2 | 2 | 102 | 39 | 140 | 2.23e-21 | 82.4 |
MsG0180004893.01.T01 | MTR_2g048970 | 40.000 | 105 | 59 | 1 | 2 | 102 | 29 | 133 | 2.47e-20 | 79.7 |
MsG0180004893.01.T01 | MTR_4g079110 | 37.255 | 102 | 61 | 2 | 3 | 102 | 55 | 155 | 1.35e-19 | 78.2 |
MsG0180004893.01.T01 | MTR_2g014760 | 35.354 | 99 | 64 | 0 | 4 | 102 | 29 | 127 | 1.62e-19 | 77.4 |
MsG0180004893.01.T01 | MTR_3g077570 | 38.000 | 100 | 62 | 0 | 1 | 100 | 18 | 117 | 1.77e-19 | 77.0 |
MsG0180004893.01.T01 | MTR_3g077560 | 36.000 | 100 | 64 | 0 | 1 | 100 | 21 | 120 | 3.52e-18 | 73.9 |
MsG0180004893.01.T01 | MTR_7g035245 | 42.105 | 95 | 55 | 0 | 6 | 100 | 8 | 102 | 8.75e-18 | 72.4 |
MsG0180004893.01.T01 | MTR_1g015890 | 35.644 | 101 | 63 | 1 | 4 | 102 | 49 | 149 | 2.00e-17 | 72.8 |
MsG0180004893.01.T01 | MTR_1g069255 | 37.374 | 99 | 61 | 1 | 2 | 99 | 84 | 182 | 7.47e-16 | 69.3 |
MsG0180004893.01.T01 | MTR_3g104510 | 35.354 | 99 | 58 | 3 | 4 | 101 | 24 | 117 | 2.23e-14 | 63.9 |
MsG0180004893.01.T01 | MTR_5g077550 | 37.500 | 104 | 61 | 2 | 2 | 102 | 21 | 123 | 4.89e-14 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004893.01.T02 | AT3G62930 | 62.162 | 74 | 28 | 0 | 2 | 75 | 29 | 102 | 2.81e-32 | 107 |
MsG0180004893.01.T02 | AT1G03020 | 58.108 | 74 | 31 | 0 | 2 | 75 | 29 | 102 | 9.47e-31 | 103 |
MsG0180004893.01.T02 | AT5G18600 | 58.108 | 74 | 31 | 0 | 2 | 75 | 29 | 102 | 9.15e-30 | 101 |
MsG0180004893.01.T02 | AT4G15690 | 60.811 | 74 | 29 | 0 | 2 | 75 | 29 | 102 | 9.99e-30 | 101 |
MsG0180004893.01.T02 | AT4G15700 | 59.459 | 74 | 30 | 0 | 2 | 75 | 29 | 102 | 1.01e-29 | 101 |
MsG0180004893.01.T02 | AT4G15680 | 59.459 | 74 | 30 | 0 | 2 | 75 | 29 | 102 | 1.69e-29 | 100 |
MsG0180004893.01.T02 | AT4G15670 | 56.757 | 74 | 32 | 0 | 2 | 75 | 29 | 102 | 1.24e-28 | 98.6 |
MsG0180004893.01.T02 | AT4G15660 | 56.757 | 74 | 32 | 0 | 2 | 75 | 29 | 102 | 7.89e-28 | 96.7 |
MsG0180004893.01.T02 | AT3G21460 | 45.588 | 68 | 37 | 0 | 8 | 75 | 35 | 102 | 2.11e-18 | 72.8 |
MsG0180004893.01.T02 | AT3G62950 | 44.000 | 75 | 41 | 1 | 2 | 75 | 29 | 103 | 5.53e-18 | 71.6 |
MsG0180004893.01.T02 | AT5G14070 | 41.975 | 81 | 39 | 2 | 3 | 75 | 60 | 140 | 7.87e-17 | 69.7 |
MsG0180004893.01.T02 | AT2G47870 | 38.667 | 75 | 45 | 1 | 2 | 75 | 29 | 103 | 2.25e-16 | 67.8 |
MsG0180004893.01.T02 | AT1G06830 | 40.000 | 65 | 39 | 0 | 3 | 67 | 30 | 94 | 6.92e-16 | 66.2 |
MsG0180004893.01.T02 | AT2G30540 | 40.000 | 65 | 39 | 0 | 3 | 67 | 30 | 94 | 2.88e-15 | 64.7 |
MsG0180004893.01.T02 | AT2G47880 | 38.462 | 65 | 40 | 0 | 3 | 67 | 30 | 94 | 5.35e-15 | 63.9 |
MsG0180004893.01.T02 | AT3G62960 | 36.923 | 65 | 41 | 0 | 3 | 67 | 30 | 94 | 5.74e-14 | 61.6 |
MsG0180004893.01.T02 | AT3G02000 | 40.506 | 79 | 41 | 1 | 3 | 75 | 58 | 136 | 2.88e-13 | 60.5 |
MsG0180004893.01.T02 | AT5G63030 | 43.662 | 71 | 40 | 0 | 3 | 73 | 48 | 118 | 8.36e-13 | 58.9 |
MsG0180004893.01.T02 | AT5G40370 | 42.254 | 71 | 41 | 0 | 3 | 73 | 32 | 102 | 4.66e-12 | 57.0 |
MsG0180004893.01.T02 | AT5G40370 | 42.254 | 71 | 41 | 0 | 3 | 73 | 57 | 127 | 6.12e-12 | 57.0 |
MsG0180004893.01.T01 | AT3G62930 | 62.745 | 102 | 38 | 0 | 1 | 102 | 1 | 102 | 2.97e-48 | 149 |
MsG0180004893.01.T01 | AT1G03020 | 58.824 | 102 | 42 | 0 | 1 | 102 | 1 | 102 | 2.05e-46 | 144 |
MsG0180004893.01.T01 | AT5G18600 | 59.804 | 102 | 41 | 0 | 1 | 102 | 1 | 102 | 4.14e-46 | 144 |
MsG0180004893.01.T01 | AT4G15680 | 57.843 | 102 | 43 | 0 | 1 | 102 | 1 | 102 | 1.32e-43 | 137 |
MsG0180004893.01.T01 | AT4G15690 | 57.843 | 102 | 43 | 0 | 1 | 102 | 1 | 102 | 5.09e-43 | 136 |
MsG0180004893.01.T01 | AT4G15700 | 56.863 | 102 | 44 | 0 | 1 | 102 | 1 | 102 | 5.81e-43 | 135 |
MsG0180004893.01.T01 | AT4G15670 | 53.922 | 102 | 47 | 0 | 1 | 102 | 1 | 102 | 3.17e-41 | 131 |
MsG0180004893.01.T01 | AT4G15660 | 54.902 | 102 | 46 | 0 | 1 | 102 | 1 | 102 | 7.88e-41 | 130 |
MsG0180004893.01.T01 | AT3G21460 | 48.039 | 102 | 53 | 0 | 1 | 102 | 1 | 102 | 3.08e-33 | 111 |
MsG0180004893.01.T01 | AT3G62950 | 45.631 | 103 | 55 | 1 | 1 | 102 | 1 | 103 | 2.64e-29 | 101 |
MsG0180004893.01.T01 | AT1G06830 | 43.617 | 94 | 53 | 0 | 1 | 94 | 1 | 94 | 4.19e-28 | 98.6 |
MsG0180004893.01.T01 | AT2G47870 | 40.777 | 103 | 60 | 1 | 1 | 102 | 1 | 103 | 4.20e-28 | 98.6 |
MsG0180004893.01.T01 | AT2G30540 | 43.617 | 94 | 53 | 0 | 1 | 94 | 1 | 94 | 8.78e-28 | 97.8 |
MsG0180004893.01.T01 | AT2G47880 | 41.489 | 94 | 55 | 0 | 1 | 94 | 1 | 94 | 1.89e-26 | 94.4 |
MsG0180004893.01.T01 | AT5G14070 | 42.991 | 107 | 53 | 2 | 4 | 102 | 34 | 140 | 2.77e-26 | 95.1 |
MsG0180004893.01.T01 | AT3G62960 | 40.426 | 94 | 56 | 0 | 1 | 94 | 1 | 94 | 2.75e-25 | 91.3 |
MsG0180004893.01.T01 | AT3G02000 | 43.810 | 105 | 53 | 1 | 4 | 102 | 32 | 136 | 3.44e-23 | 87.0 |
MsG0180004893.01.T01 | AT5G63030 | 43.158 | 95 | 54 | 0 | 6 | 100 | 24 | 118 | 6.55e-20 | 78.6 |
MsG0180004893.01.T01 | AT4G33040 | 37.500 | 104 | 59 | 2 | 4 | 102 | 42 | 144 | 3.29e-18 | 74.7 |
MsG0180004893.01.T01 | AT5G40370 | 39.000 | 100 | 61 | 0 | 1 | 100 | 3 | 102 | 1.32e-17 | 72.0 |
MsG0180004893.01.T01 | AT1G28480 | 30.476 | 105 | 69 | 2 | 2 | 102 | 33 | 137 | 1.38e-16 | 70.1 |
MsG0180004893.01.T01 | AT5G11930 | 34.343 | 99 | 55 | 3 | 4 | 101 | 58 | 147 | 2.49e-16 | 69.7 |
MsG0180004893.01.T01 | AT2G20270 | 34.343 | 99 | 64 | 1 | 2 | 99 | 76 | 174 | 4.55e-16 | 69.7 |
MsG0180004893.01.T01 | AT1G03850 | 32.292 | 96 | 61 | 1 | 7 | 102 | 59 | 150 | 4.53e-15 | 66.6 |
MsG0180004893.01.T01 | AT5G40370 | 39.535 | 86 | 52 | 0 | 15 | 100 | 42 | 127 | 2.90e-13 | 61.6 |
MsG0180004893.01.T01 | AT4G28730 | 33.333 | 99 | 65 | 1 | 2 | 99 | 71 | 169 | 2.26e-12 | 60.1 |
MsG0180004893.01.T01 | AT5G20500 | 32.990 | 97 | 65 | 0 | 2 | 98 | 33 | 129 | 3.24e-12 | 58.9 |
Find 25 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGTACCAGTTGTGTTTAT+TGG | 0.272819 | 1:-84103322 | MsG0180004893.01.T01:CDS |
TCATCAAGCTCATAAACAAT+TGG | 0.354952 | 1:+84103400 | None:intergenic |
TCATGAATGCCGGAGCTATA+TGG | 0.387749 | 1:-84103231 | MsG0180004893.01.T01:CDS |
TAGAGCCACCAATGAATTGT+TGG | 0.395335 | 1:+84103299 | None:intergenic |
GAGCTTGATGAGATAACAAA+TGG | 0.409290 | 1:-84103388 | MsG0180004893.01.T01:CDS |
CATCAAGCTCATAAACAATT+GGG | 0.430944 | 1:+84103401 | None:intergenic |
GAATCATGACCCTTCATCTT+CGG | 0.437884 | 1:-84103273 | MsG0180004893.01.T01:CDS |
TGTTGGCCAATAAACACAAC+TGG | 0.465473 | 1:+84103316 | None:intergenic |
TTTATTGGCCAACAATTCAT+TGG | 0.465893 | 1:-84103307 | MsG0180004893.01.T01:CDS |
ATGACATTGATACGAAGCTT+TGG | 0.484478 | 1:-84103430 | MsG0180004893.01.T01:CDS |
CTAGCTCATTCCGAAGATGA+AGG | 0.506749 | 1:+84103263 | None:intergenic |
ATTGGCCAACAATTCATTGG+TGG | 0.532087 | 1:-84103304 | MsG0180004893.01.T01:CDS |
AAATTAAATCCATATAGCTC+CGG | 0.539907 | 1:+84103222 | None:intergenic |
GAAAGAGCACTGATTCAACT+AGG | 0.544425 | 1:-84103355 | MsG0180004893.01.T01:CDS |
ACACAACTGGTACACTTGGT+TGG | 0.550739 | 1:+84103329 | None:intergenic |
GTACCTATGCTCATGAATGC+CGG | 0.552236 | 1:-84103241 | MsG0180004893.01.T01:CDS |
ATAAACACAACTGGTACACT+TGG | 0.565056 | 1:+84103325 | None:intergenic |
GCTTCGTATCAATGTCATGA+TGG | 0.581724 | 1:+84103435 | None:intergenic |
AGCTTGATGAGATAACAAAT+GGG | 0.593380 | 1:-84103387 | MsG0180004893.01.T01:CDS |
TAATCATGGACATGATTACA+AGG | 0.612323 | 1:-84103516 | None:intergenic |
TAGCTCATTCCGAAGATGAA+GGG | 0.619643 | 1:+84103264 | None:intergenic |
AAAGAGCACTGATTCAACTA+GGG | 0.626942 | 1:-84103354 | MsG0180004893.01.T01:CDS |
GTATCAATGTCATGATGGAG+TGG | 0.644776 | 1:+84103440 | None:intergenic |
GCTCCGGCATTCATGAGCAT+AGG | 0.659701 | 1:+84103238 | None:intergenic |
GATAGTGAGTGATAAACCTG+TGG | 0.751670 | 1:-84103494 | MsG0180004893.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AGCTTGATGAGATAACAAAT+GGG | - | Chr1:84103349-84103368 | MsG0180004893.01.T01:CDS | 30.0% | |
CATCAAGCTCATAAACAATT+GGG | + | Chr1:84103338-84103357 | None:intergenic | 30.0% | |
TCATCAAGCTCATAAACAAT+TGG | + | Chr1:84103339-84103358 | None:intergenic | 30.0% | |
TTTATTGGCCAACAATTCAT+TGG | - | Chr1:84103429-84103448 | MsG0180004893.01.T01:CDS | 30.0% | |
AGTGTACCAGTTGTGTTTAT+TGG | - | Chr1:84103414-84103433 | MsG0180004893.01.T01:CDS | 35.0% | |
ATAAACACAACTGGTACACT+TGG | + | Chr1:84103414-84103433 | None:intergenic | 35.0% | |
ATGACATTGATACGAAGCTT+TGG | - | Chr1:84103306-84103325 | MsG0180004893.01.T01:CDS | 35.0% | |
GAGCTTGATGAGATAACAAA+TGG | - | Chr1:84103348-84103367 | MsG0180004893.01.T01:CDS | 35.0% | |
!! | AAAGAGCACTGATTCAACTA+GGG | - | Chr1:84103382-84103401 | MsG0180004893.01.T01:CDS | 35.0% |
ATTGGCCAACAATTCATTGG+TGG | - | Chr1:84103432-84103451 | MsG0180004893.01.T01:CDS | 40.0% | |
GAATCATGACCCTTCATCTT+CGG | - | Chr1:84103463-84103482 | MsG0180004893.01.T01:CDS | 40.0% | |
GATAGTGAGTGATAAACCTG+TGG | - | Chr1:84103242-84103261 | MsG0180004893.01.T01:CDS | 40.0% | |
GCTTCGTATCAATGTCATGA+TGG | + | Chr1:84103304-84103323 | None:intergenic | 40.0% | |
TAGAGCCACCAATGAATTGT+TGG | + | Chr1:84103440-84103459 | None:intergenic | 40.0% | |
TAGCTCATTCCGAAGATGAA+GGG | + | Chr1:84103475-84103494 | None:intergenic | 40.0% | |
TGTTGGCCAATAAACACAAC+TGG | + | Chr1:84103423-84103442 | None:intergenic | 40.0% | |
! | CTTTTGCTGAATATCACCAC+AGG | + | Chr1:84103261-84103280 | None:intergenic | 40.0% |
! | GTATCAATGTCATGATGGAG+TGG | + | Chr1:84103299-84103318 | None:intergenic | 40.0% |
!! | GAAAGAGCACTGATTCAACT+AGG | - | Chr1:84103381-84103400 | MsG0180004893.01.T01:CDS | 40.0% |
ACACAACTGGTACACTTGGT+TGG | + | Chr1:84103410-84103429 | None:intergenic | 45.0% | |
CTAGCTCATTCCGAAGATGA+AGG | + | Chr1:84103476-84103495 | None:intergenic | 45.0% | |
GTACCTATGCTCATGAATGC+CGG | - | Chr1:84103495-84103514 | MsG0180004893.01.T01:CDS | 45.0% | |
TCATGAATGCCGGAGCTATA+TGG | - | Chr1:84103505-84103524 | MsG0180004893.01.T01:CDS | 45.0% | |
GCTCCGGCATTCATGAGCAT+AGG | + | Chr1:84103501-84103520 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 84103225 | 84103533 | 84103225 | ID=MsG0180004893.01;Name=MsG0180004893.01 |
Chr1 | mRNA | 84103225 | 84103533 | 84103225 | ID=MsG0180004893.01.T01;Parent=MsG0180004893.01;Name=MsG0180004893.01.T01;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|0|1|0|102 |
Chr1 | exon | 84103225 | 84103533 | 84103225 | ID=MsG0180004893.01.T01:exon:47024;Parent=MsG0180004893.01.T01 |
Chr1 | CDS | 84103225 | 84103533 | 84103225 | ID=MsG0180004893.01.T01:cds;Parent=MsG0180004893.01.T01 |
Chr1 | mRNA | 84103225 | 84103452 | 84103225 | ID=MsG0180004893.01.T02;Parent=MsG0180004893.01;Name=MsG0180004893.01.T02;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|0|1|0|75 |
Chr1 | exon | 84103225 | 84103452 | 84103225 | ID=MsG0180004893.01.T02:exon:47025;Parent=MsG0180004893.01.T02 |
Chr1 | CDS | 84103225 | 84103452 | 84103225 | ID=MsG0180004893.01.T02:cds;Parent=MsG0180004893.01.T02 |
Chr1 | mRNA | 84103225 | 84103290 | 84103225 | ID=MsG0180004893.01.T03;Parent=MsG0180004893.01;Name=MsG0180004893.01.T03;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|0|1|0|21 |
Chr1 | exon | 84103225 | 84103290 | 84103225 | ID=MsG0180004893.01.T03:exon:47026;Parent=MsG0180004893.01.T03 |
Chr1 | CDS | 84103225 | 84103290 | 84103225 | ID=MsG0180004893.01.T03:cds;Parent=MsG0180004893.01.T03 |
Gene Sequence |
Protein sequence |