AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008065.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008065.01.T01 MTR_2g437720 90.694 720 49 3 1 719 1 703 0.0 1230
MsG0280008065.01.T01 MTR_2g437720 97.458 118 3 0 725 842 798 915 4.69e-65 235
MsG0280008065.01.T01 MTR_4g094795 38.714 669 271 25 97 707 21 608 3.53e-99 327
MsG0280008065.01.T01 MTR_4g094795 61.864 118 43 1 725 842 702 817 2.70e-32 135
MsG0280008065.01.T01 MTR_1g090803 31.321 265 123 5 629 839 589 848 4.10e-29 125
MsG0280008065.01.T01 MTR_4g056600 27.245 323 171 7 563 839 511 815 3.30e-25 112
MsG0280008065.01.T01 MTR_2g084475 40.945 127 61 3 725 839 734 858 3.46e-22 103
MsG0280008065.01.T01 MTR_2g084475 40.945 127 61 3 725 839 709 833 3.53e-22 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008065.01.T01 AT1G30860 34.138 621 283 19 308 841 146 727 1.33e-76 264
MsG0280008065.01.T01 AT2G34920 33.569 566 278 20 316 841 156 663 3.25e-74 256
MsG0280008065.01.T01 AT2G34920 32.264 561 278 19 316 841 156 649 1.48e-67 237
MsG0280008065.01.T01 AT5G04460 28.814 531 273 15 383 839 361 860 2.89e-41 163
MsG0280008065.01.T01 AT5G04460 28.814 531 273 15 383 839 361 860 2.89e-41 163
MsG0280008065.01.T01 AT5G04460 28.814 531 273 15 383 839 361 860 2.89e-41 163
MsG0280008065.01.T01 AT5G04460 28.814 531 273 15 383 839 361 860 2.89e-41 163
MsG0280008065.01.T01 AT4G20160 49.153 118 60 0 724 841 1093 1210 2.97e-32 135
MsG0280008065.01.T01 AT4G20160 49.153 118 60 0 724 841 1095 1212 3.05e-32 135
MsG0280008065.01.T01 AT5G04460 26.411 496 260 15 383 804 361 825 3.40e-23 106
MsG0280008065.01.T01 AT2G27950 29.167 240 124 5 644 839 599 836 3.50e-22 103
MsG0280008065.01.T01 AT2G27950 29.167 240 124 5 644 839 599 836 3.50e-22 103
MsG0280008065.01.T01 AT2G27950 29.167 240 124 5 644 839 599 836 3.50e-22 103
MsG0280008065.01.T01 AT5G44690 33.775 151 98 2 613 763 505 653 1.42e-16 84.7
MsG0280008065.01.T01 AT4G20160 40.299 134 60 3 563 678 873 1004 3.08e-15 80.9
MsG0280008065.01.T01 AT4G20160 39.535 86 50 1 724 809 1093 1176 6.65e-12 70.1

Find 162 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCGTTTGGTTGTGTTCTA+AGG 0.154914 2:-24971871 MsG0280008065.01.T01:CDS
CGTCTTCCCTTGTTCAATTA+TGG 0.178057 2:-24971346 MsG0280008065.01.T01:CDS
CTTCAGATGATGTTGATTTC+TGG 0.190668 2:+24970368 None:intergenic
CTAGATGTCCTGACAATTTC+AGG 0.206680 2:+24971413 None:intergenic
TGTTTGCACCCTTTGGTTAT+TGG 0.218171 2:+24968557 None:intergenic
ATGTCTATGATGATGAATTT+TGG 0.231098 2:-24972036 MsG0280008065.01.T01:five_prime_UTR
CTGTACTGTATTTCTTTCTT+TGG 0.236514 2:+24969973 None:intergenic
GATGTTGTTTACTATCTCTT+TGG 0.254049 2:+24969922 None:intergenic
GGAAGATCTCCTCAAGAAAA+TGG 0.263129 2:-24969133 MsG0280008065.01.T01:CDS
ACAATAACAATGTTTCTTCT+TGG 0.274224 2:-24971676 MsG0280008065.01.T01:CDS
TTCCAGGATACAAGTGTTCT+TGG 0.286044 2:+24969152 None:intergenic
GAAAGAGTATCTTACTTTAG+AGG 0.290159 2:-24967579 MsG0280008065.01.T01:three_prime_UTR
CTCCATTGGAGTGTTTGGTT+TGG 0.290502 2:+24971295 None:intergenic
TTCAAATCTTAACGAGAAAA+AGG 0.292554 2:-24969678 MsG0280008065.01.T01:CDS
GTCTTCCCTTGTTCAATTAT+GGG 0.293074 2:-24971345 MsG0280008065.01.T01:CDS
TCGTGAGATGGTGTCGAATT+TGG 0.295134 2:-24971489 MsG0280008065.01.T01:CDS
CGCTCTTCCCAATAGCTTCT+CGG 0.315396 2:+24969506 None:intergenic
CAAAGTTCTTGATGTTCCTT+TGG 0.316757 2:+24971786 None:intergenic
AACTGCTTTCAGCATAGTTC+TGG 0.321039 2:+24969594 None:intergenic
CTTCATCCCTTTATCTGAAA+AGG 0.325126 2:-24971991 MsG0280008065.01.T01:five_prime_UTR
CTCCGACTTTGTCAATTCTA+TGG 0.336013 2:+24969817 None:intergenic
AAGTTTCATGACTAAGGATT+TGG 0.352118 2:+24967555 None:intergenic
TTCAAACTTTCAAGAGGGTT+TGG 0.353887 2:+24971941 None:intergenic
AAATTGAAAATGGCTTCTTC+TGG 0.358108 2:-24971914 MsG0280008065.01.T01:exon
TTTCTCGACCGAGAAGCTAT+TGG 0.361517 2:-24969514 MsG0280008065.01.T01:CDS
CAGAGTTCACCTCCATCTTC+TGG 0.365775 2:-24970915 MsG0280008065.01.T01:CDS
TTCACTAAGTTTCATGACTA+AGG 0.368348 2:+24967549 None:intergenic
ATGTTGTTTACTATCTCTTT+GGG 0.368675 2:+24969923 None:intergenic
GCTCTTTGCTCTGAAAGTTC+TGG 0.370843 2:+24970825 None:intergenic
CAATAACAATGTTTCTTCTT+GGG 0.371423 2:-24971675 MsG0280008065.01.T01:CDS
GTCTCCAAATTCGCACAAAA+AGG 0.379187 2:-24970684 MsG0280008065.01.T01:CDS
CATCATCAACAACAACAATA+AGG 0.379872 2:-24971594 MsG0280008065.01.T01:CDS
TTCTCGACCGAGAAGCTATT+GGG 0.381322 2:-24969513 MsG0280008065.01.T01:CDS
TTCAAACCTTAGTTGCATAA+TGG 0.382804 2:+24970315 None:intergenic
ACAAACCTGTTTGCACCCTT+TGG 0.385881 2:+24968550 None:intergenic
AGCACCTGTATATCTTCATT+TGG 0.389980 2:+24969443 None:intergenic
TGAAATGTGCCAACGATTTA+CGG 0.405058 2:-24967686 MsG0280008065.01.T01:CDS
ACTTGTTCAACACGAATTAG+AGG 0.406957 2:-24970789 MsG0280008065.01.T01:CDS
TATATCTTCATTTGGAGAAC+CGG 0.410944 2:+24969451 None:intergenic
ATTGCGACTTCTTCACCGTT+TGG 0.416146 2:-24971884 MsG0280008065.01.T01:CDS
CAATGATTTGCTTATGCAGT+TGG 0.421952 2:-24970754 MsG0280008065.01.T01:CDS
TTATGCAGTTGGAGCGTGAT+AGG 0.422256 2:-24970743 MsG0280008065.01.T01:CDS
CAGAGAAAGTAGCAAAGTTA+AGG 0.424857 2:-24971825 MsG0280008065.01.T01:CDS
ACATGGTAATGCACGTGTTA+AGG 0.427430 2:+24971753 None:intergenic
CTTGATAAAGTTGCTCCATA+TGG 0.430040 2:+24968649 None:intergenic
GAGAATGTGTTTGTTGTTGA+AGG 0.437419 2:-24971155 MsG0280008065.01.T01:CDS
TTCATCCCTTTATCTGAAAA+GGG 0.437419 2:-24971990 MsG0280008065.01.T01:five_prime_UTR
CTTGAAAAGTATACGTGAAA+AGG 0.443908 2:+24967491 None:intergenic
AAGAGGCTTAACAATTCAAA+TGG 0.444760 2:-24971320 MsG0280008065.01.T01:CDS
TGCATCCATCACGATGATTA+CGG 0.456411 2:+24971846 None:intergenic
TCTTCATTCCCTGATGGTAA+TGG 0.456621 2:+24971095 None:intergenic
GATTGTGCAGTAGAAGAGGA+AGG 0.461377 2:-24969623 MsG0280008065.01.T01:CDS
TTTGGAGACAGTTCCACGTT+CGG 0.462907 2:+24970698 None:intergenic
TGACAGTTCCATGCACAATC+TGG 0.465200 2:+24969846 None:intergenic
TTCTCCAAATGAAGATATAC+AGG 0.468784 2:-24969447 MsG0280008065.01.T01:CDS
ACATTCTCATTGTTGCAAGT+TGG 0.471598 2:+24971170 None:intergenic
TTGTTCAATTATGGGAAAAG+AGG 0.472023 2:-24971337 MsG0280008065.01.T01:CDS
TTTGAAGGACCATTACCATC+AGG 0.474352 2:-24971104 MsG0280008065.01.T01:CDS
GATAGACAATGAAGGGTTGA+TGG 0.476400 2:-24969182 MsG0280008065.01.T01:CDS
ACCGTTTGGTTGTGTTCTAA+GGG 0.478670 2:-24971870 MsG0280008065.01.T01:CDS
ATGGAGAAAACAAGTCCAAC+TGG 0.481177 2:-24971278 MsG0280008065.01.T01:CDS
ATGGAGAAAACAAGTCCAAC+TGG 0.484534 2:-24971203 MsG0280008065.01.T01:CDS
TTCACGCCTTCTTGATCGAT+GGG 0.487183 2:-24971525 MsG0280008065.01.T01:CDS
TTCCAAGAACACTTGTATCC+TGG 0.487761 2:-24969154 MsG0280008065.01.T01:CDS
ATATGATATGAGAGGCCATA+TGG 0.488063 2:-24968664 MsG0280008065.01.T01:CDS
GTTATTGTTAGTGTTGTCAA+TGG 0.488153 2:+24971445 None:intergenic
GATCTGCCATTATGCAACTA+AGG 0.494103 2:-24970321 MsG0280008065.01.T01:intron
TCAAGAAGGCGTGAATGTCT+TGG 0.495910 2:+24971533 None:intergenic
GTTTCTTCTTGGGCTTCAAA+AGG 0.499007 2:-24971665 MsG0280008065.01.T01:CDS
CATAACAAGACTGGTAAGAA+AGG 0.500710 2:-24967878 MsG0280008065.01.T01:CDS
AATAACCAAAGGGTGCAAAC+AGG 0.504704 2:-24968555 MsG0280008065.01.T01:intron
AAGTTGACTCAGTTCTATAC+AGG 0.506085 2:-24967829 MsG0280008065.01.T01:intron
TGAGACATGACAGTTGAGCT+TGG 0.506263 2:+24969770 None:intergenic
CGGTAGATGAAGAAGAGGAA+AGG 0.507356 2:-24969099 MsG0280008065.01.T01:CDS
GGTAGATGAAGAAGAGGAAA+GGG 0.510736 2:-24969098 MsG0280008065.01.T01:intron
AAGCTCGGATGAATGTTCTT+CGG 0.511840 2:-24971387 MsG0280008065.01.T01:CDS
ATCAAGAGATGAGTGAACTA+AGG 0.515850 2:-24968632 MsG0280008065.01.T01:CDS
ATGACATGCCTGAAATTGTC+AGG 0.516256 2:-24971421 MsG0280008065.01.T01:CDS
ATGATGAAAATAATTATGAC+TGG 0.518498 2:-24969547 MsG0280008065.01.T01:CDS
TGTGTTCAGTTGATCAAAGT+AGG 0.521979 2:-24971010 MsG0280008065.01.T01:CDS
TTGTTTACTATCTCTTTGGG+AGG 0.525545 2:+24969926 None:intergenic
TTTCGCGGAAGCCACTAGAA+AGG 0.527381 2:+24969272 None:intergenic
CTGAGTCAACTTTCATCTCA+TGG 0.528417 2:+24967840 None:intergenic
TAACGAAAATGAGCCATCCT+TGG 0.528953 2:-24971570 MsG0280008065.01.T01:CDS
TTATGATTGTGCAGTAGAAG+AGG 0.530927 2:-24969627 MsG0280008065.01.T01:CDS
AGAGCAAAGAGCCTTTCCTC+AGG 0.536128 2:-24970814 MsG0280008065.01.T01:CDS
AACGATTTACGGTGGACCAA+TGG 0.536877 2:-24967675 MsG0280008065.01.T01:CDS
TCAACCTATCCATTGTTTCG+CGG 0.538140 2:+24969257 None:intergenic
GATGATGAGATAGACAATGA+AGG 0.539997 2:-24969190 MsG0280008065.01.T01:CDS
GCATGGGGAGCTAAAGAACT+TGG 0.540046 2:-24970721 MsG0280008065.01.T01:CDS
AGTTGGAGCGTGATAGGCAT+GGG 0.540435 2:-24970737 MsG0280008065.01.T01:CDS
CAGTTGGAGCGTGATAGGCA+TGG 0.543124 2:-24970738 MsG0280008065.01.T01:CDS
ATTCACGCCTTCTTGATCGA+TGG 0.546135 2:-24971526 MsG0280008065.01.T01:CDS
GATGTTGATTTCTGGTGTGA+TGG 0.551693 2:+24970376 None:intergenic
AACGATTCTTCATTCCCTGA+TGG 0.554764 2:+24971089 None:intergenic
GAGAACGGTAGATGAAGAAG+AGG 0.555128 2:-24969104 MsG0280008065.01.T01:CDS
ATTGTGCAGTAGAAGAGGAA+GGG 0.556865 2:-24969622 MsG0280008065.01.T01:CDS
AACACAACACATAAGTCAGC+AGG 0.559252 2:+24967394 None:intergenic
CTAAAGAACTTGGCCGAACG+TGG 0.559845 2:-24970711 MsG0280008065.01.T01:CDS
GTTTCAACCTTCCTTTCTAG+TGG 0.560956 2:-24969283 MsG0280008065.01.T01:CDS
TAGTGGCTTCCGCGAAACAA+TGG 0.562825 2:-24969266 MsG0280008065.01.T01:CDS
GTTGGACTTGTACTACCAGT+TGG 0.563656 2:+24971188 None:intergenic
GTTTGTTGTTAACACTCCAA+TGG 0.564410 2:-24971222 MsG0280008065.01.T01:CDS
AAGAAGTCACATAACAAGAC+TGG 0.565229 2:-24967887 MsG0280008065.01.T01:CDS
TCATTGTCATCACCAGAAGA+TGG 0.568059 2:+24970903 None:intergenic
ATATACAGGTGCTTCTTCAA+AGG 0.568191 2:-24969433 MsG0280008065.01.T01:intron
TCCCTTAGAACACAACCAAA+CGG 0.569036 2:+24971869 None:intergenic
GGGAAGAGCGGAGGCAAGCA+TGG 0.569370 2:-24969493 MsG0280008065.01.T01:CDS
GAAATCAATAAAGAGTTGCA+TGG 0.573388 2:-24968610 MsG0280008065.01.T01:CDS
GATTGGGAATCTGATAAGAC+AGG 0.576359 2:-24971047 MsG0280008065.01.T01:CDS
CAAAGAAAGAAATACAGTAC+AGG 0.576417 2:-24969972 MsG0280008065.01.T01:CDS
GAACATCAAGAACTTTGTCA+TGG 0.582086 2:-24971780 MsG0280008065.01.T01:CDS
CTAATCAACGAAGCCAAGGA+TGG 0.582490 2:+24971557 None:intergenic
ATGATGAGATAGACAATGAA+GGG 0.586074 2:-24969189 MsG0280008065.01.T01:CDS
TTGAAGGACCATTACCATCA+GGG 0.586735 2:-24971103 MsG0280008065.01.T01:CDS
GTTGCACTTGTCACACCAGT+TGG 0.588298 2:+24971263 None:intergenic
CAGGACATCTAGTTCAAGCT+CGG 0.589631 2:-24971402 MsG0280008065.01.T01:CDS
TGCGAGACAAGCTCGTGAGA+TGG 0.589919 2:-24971501 MsG0280008065.01.T01:CDS
ATAAGACAGGTGATCAGAGT+AGG 0.590816 2:-24971034 MsG0280008065.01.T01:CDS
GCGGAAGCCACTAGAAAGGA+AGG 0.594096 2:+24969276 None:intergenic
TGCATAATGGCAGATCCGTA+TGG 0.595208 2:+24970328 None:intergenic
TCTTCGGAGAAATTGAACCT+TGG 0.595298 2:-24971371 MsG0280008065.01.T01:CDS
AGGGACCGTAATCATCGTGA+TGG 0.600040 2:-24971851 MsG0280008065.01.T01:CDS
AACAGACAAGTACAACCATA+CGG 0.601071 2:-24970343 MsG0280008065.01.T01:CDS
CGAGAAGCTATTGGGAAGAG+CGG 0.602957 2:-24969505 MsG0280008065.01.T01:CDS
ACAAGTGGCCAGATTGTGCA+TGG 0.603264 2:-24969854 MsG0280008065.01.T01:CDS
ATTGGTCCACCGTAAATCGT+TGG 0.604903 2:+24967677 None:intergenic
TGTTGCAGAATCAGAAGACA+TGG 0.612530 2:+24971736 None:intergenic
ACTTAAATTGTTACGTGGCG+CGG 0.614471 2:-24970410 MsG0280008065.01.T01:CDS
TTTGCTGATTTGATCAGCAG+TGG 0.614524 2:+24969880 None:intergenic
CGCCATAGAATTGACAAAGT+CGG 0.614709 2:-24969819 MsG0280008065.01.T01:CDS
CTTCGACTTAAATTGTTACG+TGG 0.616038 2:-24970415 MsG0280008065.01.T01:CDS
TGGACTAATCAACGAAGCCA+AGG 0.616791 2:+24971553 None:intergenic
ATCCAAACCAAACACTCCAA+TGG 0.617112 2:-24971297 MsG0280008065.01.T01:CDS
AAGGTAGCAACAATCTTGCA+AGG 0.617645 2:-24971646 MsG0280008065.01.T01:CDS
AGAAAATGGAACAGAGAGAA+CGG 0.621319 2:-24969119 MsG0280008065.01.T01:CDS
TGAACAAGTAACCTGAGGAA+AGG 0.633618 2:+24970803 None:intergenic
TCGCAGCCCATCGATCAAGA+AGG 0.634071 2:+24971519 None:intergenic
GATCTCATATATGATATGAG+AGG 0.634713 2:-24968672 MsG0280008065.01.T01:CDS
AAGCAGTTATGAAGAGATGG+TGG 0.635175 2:-24969579 MsG0280008065.01.T01:CDS
CAAATCAGCAAAGACACAAG+TGG 0.635476 2:-24969869 MsG0280008065.01.T01:CDS
GACAATGATCATGAAGGATG+TGG 0.638361 2:-24970888 MsG0280008065.01.T01:CDS
TGGTAATGCACGTGTTAAGG+TGG 0.640879 2:+24971756 None:intergenic
GCTTCCGCGAAACAATGGAT+AGG 0.642771 2:-24969261 MsG0280008065.01.T01:CDS
AAGAGGGTCGGAACTAGGAG+AGG 0.645927 2:-24971129 MsG0280008065.01.T01:CDS
AGGTTGATGCAGTCTCATAG+AGG 0.647378 2:-24969241 MsG0280008065.01.T01:CDS
TCAAAGTAGGAAGAATTCGT+CGG 0.647975 2:-24970997 MsG0280008065.01.T01:CDS
TGAAAGCAGTTATGAAGAGA+TGG 0.649757 2:-24969582 MsG0280008065.01.T01:CDS
TTACTGTGAGGAAACTTCTG+AGG 0.653061 2:-24969720 MsG0280008065.01.T01:CDS
GAAGCTATTGGGAAGAGCGG+AGG 0.656101 2:-24969502 MsG0280008065.01.T01:CDS
TTGAAGAGAAACAATCACAA+TGG 0.661700 2:-24971617 MsG0280008065.01.T01:CDS
TCTGGTGCAAATTCTTTACG+AGG 0.662928 2:+24970843 None:intergenic
GGTGATGACAATGATCATGA+AGG 0.664896 2:-24970894 MsG0280008065.01.T01:CDS
CGTGTTGAACAAGTAACCTG+AGG 0.665234 2:+24970798 None:intergenic
GAACAAGGGAAGACGCACCA+AGG 0.669380 2:+24971354 None:intergenic
GTTGGAGCGTGATAGGCATG+GGG 0.671128 2:-24970736 MsG0280008065.01.T01:CDS
TATAGAGAGATGCTTGACAC+CGG 0.672311 2:-24969470 MsG0280008065.01.T01:CDS
AATGATCATGAAGGATGTGG+TGG 0.683968 2:-24970885 MsG0280008065.01.T01:CDS
TTGTCATCACCAGAAGATGG+AGG 0.693312 2:+24970906 None:intergenic
AATGTGCCAACGATTTACGG+TGG 0.717556 2:-24967683 MsG0280008065.01.T01:CDS
GGCTCAGCGTGATTACTGTG+AGG 0.718046 2:-24969732 MsG0280008065.01.T01:CDS
AGGATGTGGTGGTAGCAGTG+TGG 0.795037 2:-24970874 MsG0280008065.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTAGATTGAAAAT+TGG - Chr2:24970088-24970107 MsG0280008065.01.T01:intron 10.0%
!! TTTGAAGAAAAAATTGAAAA+TGG - Chr2:24967542-24967561 MsG0280008065.01.T01:three_prime_UTR 15.0%
!!! AATATTTGTAATTTTCCTTT+TGG + Chr2:24971374-24971393 None:intergenic 15.0%
!!! ATATTTGTAATTTTCCTTTT+GGG + Chr2:24971373-24971392 None:intergenic 15.0%
!!! TCAAGTATATGATTTTTTTT+AGG - Chr2:24971993-24972012 MsG0280008065.01.T01:five_prime_UTR 15.0%
!!! TTTAATTTCTGACATATATA+TGG + Chr2:24969207-24969226 None:intergenic 15.0%
!! ATGATGAAAATAATTATGAC+TGG - Chr2:24969919-24969938 MsG0280008065.01.T01:CDS 20.0%
!! ATTCAGGTAAAAGAATAAAA+AGG - Chr2:24968809-24968828 MsG0280008065.01.T01:intron 20.0%
!! GTCATGAAATGTATTAAATA+TGG - Chr2:24971529-24971548 MsG0280008065.01.T01:CDS 20.0%
!!! ATATGTTTTAAAAATCGAGT+TGG - Chr2:24971068-24971087 MsG0280008065.01.T01:CDS 20.0%
!!! ATCTTTTACCAAATACAAAA+TGG - Chr2:24970753-24970772 MsG0280008065.01.T01:CDS 20.0%
!!! GATTTTTTTTAGGAGAAATT+CGG - Chr2:24972003-24972022 MsG0280008065.01.T01:five_prime_UTR 20.0%
!!! TTGACACATTTAAAATCTAT+AGG + Chr2:24970949-24970968 None:intergenic 20.0%
! AAAGTTGTCAATGAATCATT+AGG - Chr2:24970986-24971005 MsG0280008065.01.T01:CDS 25.0%
! ACAAAAATCCAATAACCAAA+GGG - Chr2:24970901-24970920 MsG0280008065.01.T01:CDS 25.0%
! ACAATAACAATGTTTCTTCT+TGG - Chr2:24967790-24967809 MsG0280008065.01.T01:intron 25.0%
! AGAAACATTCATCACAATTA+AGG - Chr2:24969408-24969427 MsG0280008065.01.T01:intron 25.0%
! AGTCTTCTTATCATGATAAT+CGG - Chr2:24970641-24970660 MsG0280008065.01.T01:intron 25.0%
! CAATAACAATGTTTCTTCTT+GGG - Chr2:24967791-24967810 MsG0280008065.01.T01:intron 25.0%
! GTAAAAGAATAAAAAGGAAG+TGG - Chr2:24968815-24968834 MsG0280008065.01.T01:intron 25.0%
! TACAAAAATCCAATAACCAA+AGG - Chr2:24970900-24970919 MsG0280008065.01.T01:CDS 25.0%
! TTCAAATCTTAACGAGAAAA+AGG - Chr2:24969788-24969807 MsG0280008065.01.T01:CDS 25.0%
! TTCAAATGTTACCTTAAGAT+AGG - Chr2:24970709-24970728 MsG0280008065.01.T01:CDS 25.0%
! TTTCTATGTATTGCTTATCT+TGG + Chr2:24969393-24969412 None:intergenic 25.0%
!! ATGTTGTTTACTATCTCTTT+GGG + Chr2:24969546-24969565 None:intergenic 25.0%
!! ATTTTTCCTGCATTACATAA+CGG + Chr2:24969460-24969479 None:intergenic 25.0%
!! TTTTCTTCAAACTTTCAAGA+GGG + Chr2:24967533-24967552 None:intergenic 25.0%
!! TTTTTCTTCAAACTTTCAAG+AGG + Chr2:24967534-24967553 None:intergenic 25.0%
!!! ATGTCTATGATGATGAATTT+TGG - Chr2:24967430-24967449 MsG0280008065.01.T01:three_prime_UTR 25.0%
!!! CAAGCACTTACTTTTATAAA+TGG - Chr2:24969328-24969347 MsG0280008065.01.T01:intron 25.0%
!!! CAGGAAAAATTTTAGCATTA+GGG - Chr2:24969470-24969489 MsG0280008065.01.T01:CDS 25.0%
!!! TGTCTATGATGATGAATTTT+GGG - Chr2:24967431-24967450 MsG0280008065.01.T01:three_prime_UTR 25.0%
AAATTGAAAATGGCTTCTTC+TGG - Chr2:24967552-24967571 MsG0280008065.01.T01:three_prime_UTR 30.0%
AAGAGGCTTAACAATTCAAA+TGG - Chr2:24968146-24968165 MsG0280008065.01.T01:intron 30.0%
AAGTTTCATGACTAAGGATT+TGG + Chr2:24971914-24971933 None:intergenic 30.0%
AATGCACTAAACCTATCTTA+AGG + Chr2:24970723-24970742 None:intergenic 30.0%
ACGAGAAAAAGGAAATTAAC+CGG - Chr2:24969799-24969818 MsG0280008065.01.T01:CDS 30.0%
ACTCACAATTGAATGATGAT+TGG + Chr2:24970683-24970702 None:intergenic 30.0%
ATGATGAGATAGACAATGAA+GGG - Chr2:24970277-24970296 MsG0280008065.01.T01:intron 30.0%
ATTCTAATCAATCCTCATCA+TGG - Chr2:24970545-24970564 MsG0280008065.01.T01:intron 30.0%
CAAAGAAAGAAATACAGTAC+AGG - Chr2:24969494-24969513 MsG0280008065.01.T01:CDS 30.0%
CATCATCAACAACAACAATA+AGG - Chr2:24967872-24967891 MsG0280008065.01.T01:CDS 30.0%
CTAAATTTCACTCTATGGAA+TGG + Chr2:24969248-24969267 None:intergenic 30.0%
CTGTACTGTATTTCTTTCTT+TGG + Chr2:24969496-24969515 None:intergenic 30.0%
CTTAAGAATTTCCCAAACAA+AGG - Chr2:24971030-24971049 MsG0280008065.01.T01:CDS 30.0%
GAAATCAATAAAGAGTTGCA+TGG - Chr2:24970856-24970875 MsG0280008065.01.T01:CDS 30.0%
GATCTCATATATGATATGAG+AGG - Chr2:24970794-24970813 MsG0280008065.01.T01:CDS 30.0%
GGTTAGGTTATATTAGCATT+CGG + Chr2:24971166-24971185 None:intergenic 30.0%
GTTATTGTTAGTGTTGTCAA+TGG + Chr2:24968024-24968043 None:intergenic 30.0%
TAAGAAGACTGAGATTGATA+AGG + Chr2:24970631-24970650 None:intergenic 30.0%
TAGTACAACTTCAATAGTTG+TGG - Chr2:24968950-24968969 MsG0280008065.01.T01:intron 30.0%
TATATCTTCATTTGGAGAAC+CGG + Chr2:24970018-24970037 None:intergenic 30.0%
TCATGACTAAAGATATTCAG+AGG + Chr2:24971516-24971535 None:intergenic 30.0%
TTCAAACCTTAGTTGCATAA+TGG + Chr2:24969154-24969173 None:intergenic 30.0%
TTCACTAAGTTTCATGACTA+AGG + Chr2:24971920-24971939 None:intergenic 30.0%
TTCATCCCTTTATCTGAAAA+GGG - Chr2:24967476-24967495 MsG0280008065.01.T01:three_prime_UTR 30.0%
TTCTCCAAATGAAGATATAC+AGG - Chr2:24970019-24970038 MsG0280008065.01.T01:intron 30.0%
TTGAAGAGAAACAATCACAA+TGG - Chr2:24967849-24967868 MsG0280008065.01.T01:CDS 30.0%
TTGTTCAATTATGGGAAAAG+AGG - Chr2:24968129-24968148 MsG0280008065.01.T01:intron 30.0%
TTGTTGAAAAAGCAAAGCAT+TGG + Chr2:24971467-24971486 None:intergenic 30.0%
! AAACAACCCTTTTCAGATAA+AGG + Chr2:24967485-24967504 None:intergenic 30.0%
! AACAACCCTTTTCAGATAAA+GGG + Chr2:24967484-24967503 None:intergenic 30.0%
! AACTGTTTTCATCATTTTGC+CGG + Chr2:24969821-24969840 None:intergenic 30.0%
! ACATATTGGACATTTTCCAT+TGG + Chr2:24971810-24971829 None:intergenic 30.0%
! AGTAGTTTGTGTCATGAAAT+CGG - Chr2:24970517-24970536 MsG0280008065.01.T01:intron 30.0%
! CTTGAAAAGTATACGTGAAA+AGG + Chr2:24971978-24971997 None:intergenic 30.0%
! CTTTTCCCATAATTGAACAA+GGG + Chr2:24968129-24968148 None:intergenic 30.0%
! GATGTTGTTTACTATCTCTT+TGG + Chr2:24969547-24969566 None:intergenic 30.0%
! TCTTTTCCCATAATTGAACA+AGG + Chr2:24968130-24968149 None:intergenic 30.0%
! TTGTTGTTGAAGGAAAAAGA+GGG - Chr2:24968321-24968340 MsG0280008065.01.T01:intron 30.0%
!! GAAAGAGTATCTTACTTTAG+AGG - Chr2:24971887-24971906 MsG0280008065.01.T01:CDS 30.0%
!! GCAGGAAAAATTTTAGCATT+AGG - Chr2:24969469-24969488 MsG0280008065.01.T01:CDS 30.0%
!! TTTGTTGTTGAAGGAAAAAG+AGG - Chr2:24968320-24968339 MsG0280008065.01.T01:intron 30.0%
!!! AAAAGGGTTGTTTTGTTTTC+AGG - Chr2:24967492-24967511 MsG0280008065.01.T01:three_prime_UTR 30.0%
!!! CTTCTTTTTCAGCTGTAAAA+GGG + Chr2:24971557-24971576 None:intergenic 30.0%
!!! GTTATCTGTTGTCCTTTTTT+TGG - Chr2:24971488-24971507 MsG0280008065.01.T01:CDS 30.0%
!!! TCTTCTTTTTCAGCTGTAAA+AGG + Chr2:24971558-24971577 None:intergenic 30.0%
!!! TTCCATCAACTTCTTTTTTC+AGG - Chr2:24971735-24971754 MsG0280008065.01.T01:CDS 30.0%
AACAGACAAGTACAACCATA+CGG - Chr2:24969123-24969142 MsG0280008065.01.T01:CDS 35.0%
AAGAAGTCACATAACAAGAC+TGG - Chr2:24971579-24971598 MsG0280008065.01.T01:CDS 35.0%
ACATTCTCATTGTTGCAAGT+TGG + Chr2:24968224-24968243 None:intergenic 35.0%
ACTTGTTCAACACGAATTAG+AGG - Chr2:24968677-24968696 MsG0280008065.01.T01:CDS 35.0%
AGAAAATGGAACAGAGAGAA+CGG - Chr2:24970347-24970366 MsG0280008065.01.T01:CDS 35.0%
AGATGAGAAATTGAGCATGA+AGG - Chr2:24969295-24969314 MsG0280008065.01.T01:intron 35.0%
AGCACCTGTATATCTTCATT+TGG + Chr2:24970026-24970045 None:intergenic 35.0%
AGTTATAGAGACAATGAAGC+TGG - Chr2:24970568-24970587 MsG0280008065.01.T01:intron 35.0%
ATATACAGGTGCTTCTTCAA+AGG - Chr2:24970033-24970052 MsG0280008065.01.T01:intron 35.0%
ATATGATATGAGAGGCCATA+TGG - Chr2:24970802-24970821 MsG0280008065.01.T01:CDS 35.0%
ATCAAGAGATGAGTGAACTA+AGG - Chr2:24970834-24970853 MsG0280008065.01.T01:CDS 35.0%
ATGCTAATATAACCTAACCG+TGG - Chr2:24971167-24971186 MsG0280008065.01.T01:CDS 35.0%
CAAAGTTCTTGATGTTCCTT+TGG + Chr2:24967683-24967702 None:intergenic 35.0%
CACCTGAAAAAAGAAGTTGA+TGG + Chr2:24971740-24971759 None:intergenic 35.0%
CAGAGAAAGTAGCAAAGTTA+AGG - Chr2:24967641-24967660 MsG0280008065.01.T01:CDS 35.0%
CATAACAAGACTGGTAAGAA+AGG - Chr2:24971588-24971607 MsG0280008065.01.T01:CDS 35.0%
CATGAAATCGTGCAATAGAA+AGG + Chr2:24968988-24969007 None:intergenic 35.0%
CCAGTCTAAATTTCACTCTA+TGG + Chr2:24969253-24969272 None:intergenic 35.0%
CCATAGAGTGAAATTTAGAC+TGG - Chr2:24969250-24969269 MsG0280008065.01.T01:CDS 35.0%
CTTCATCCCTTTATCTGAAA+AGG - Chr2:24967475-24967494 MsG0280008065.01.T01:three_prime_UTR 35.0%
CTTCGACTTAAATTGTTACG+TGG - Chr2:24969051-24969070 MsG0280008065.01.T01:intron 35.0%
CTTGATAAAGTTGCTCCATA+TGG + Chr2:24970820-24970839 None:intergenic 35.0%
GAACATCAAGAACTTTGTCA+TGG - Chr2:24967686-24967705 MsG0280008065.01.T01:CDS 35.0%
GATGATGAGATAGACAATGA+AGG - Chr2:24970276-24970295 MsG0280008065.01.T01:intron 35.0%
GCAATATCAAAGACAACAAC+AGG + Chr2:24968907-24968926 None:intergenic 35.0%
GCATTACATAACGGTCATAA+CGG + Chr2:24969451-24969470 None:intergenic 35.0%
GTCTTCCCTTGTTCAATTAT+GGG - Chr2:24968121-24968140 MsG0280008065.01.T01:intron 35.0%
TCAAAGTAGGAAGAATTCGT+CGG - Chr2:24968469-24968488 MsG0280008065.01.T01:intron 35.0%
TCTGACATATATATGGTCCA+TGG + Chr2:24969200-24969219 None:intergenic 35.0%
TGAAAGCAGTTATGAAGAGA+TGG - Chr2:24969884-24969903 MsG0280008065.01.T01:CDS 35.0%
TGAAATGTGCCAACGATTTA+CGG - Chr2:24971780-24971799 MsG0280008065.01.T01:CDS 35.0%
TGTGTTCAGTTGATCAAAGT+AGG - Chr2:24968456-24968475 MsG0280008065.01.T01:intron 35.0%
TTATGACCGTTATGTAATGC+AGG - Chr2:24969451-24969470 MsG0280008065.01.T01:CDS 35.0%
TTATGATTGTGCAGTAGAAG+AGG - Chr2:24969839-24969858 MsG0280008065.01.T01:CDS 35.0%
TTCAAACTTTCAAGAGGGTT+TGG + Chr2:24967528-24967547 None:intergenic 35.0%
TTCCCAAACAAAGGAAAAAG+AGG - Chr2:24971039-24971058 MsG0280008065.01.T01:CDS 35.0%
TTGTTTACTATCTCTTTGGG+AGG + Chr2:24969543-24969562 None:intergenic 35.0%
! AAGTTGACTCAGTTCTATAC+AGG - Chr2:24971637-24971656 MsG0280008065.01.T01:CDS 35.0%
! ACACCTCTTTTTCCTTTGTT+TGG + Chr2:24971045-24971064 None:intergenic 35.0%
! AGAATTTTGCTTCACCCAAA+AGG - Chr2:24971356-24971375 MsG0280008065.01.T01:CDS 35.0%
! GGATCACACATTTAAAACCT+TGG + Chr2:24968886-24968905 None:intergenic 35.0%
! GGTTTAAAACAGTTGAACCA+TGG + Chr2:24971119-24971138 None:intergenic 35.0%
! GTCTCAAGAAACATGTTTTG+AGG - Chr2:24969713-24969732 MsG0280008065.01.T01:CDS 35.0%
!! AAGCACAGCCATTTTGTATT+TGG + Chr2:24970764-24970783 None:intergenic 35.0%
!! CAATGATTTGCTTATGCAGT+TGG - Chr2:24968712-24968731 MsG0280008065.01.T01:intron 35.0%
!! CACCTCTTTTTCCTTTGTTT+GGG + Chr2:24971044-24971063 None:intergenic 35.0%
!! CTATGATGATGAATTTTGGG+AGG - Chr2:24967434-24967453 MsG0280008065.01.T01:three_prime_UTR 35.0%
!! CTTCAGATGATGTTGATTTC+TGG + Chr2:24969101-24969120 None:intergenic 35.0%
!! GAGAATGTGTTTGTTGTTGA+AGG - Chr2:24968311-24968330 MsG0280008065.01.T01:intron 35.0%
!! GTTTGTTGTTAACACTCCAA+TGG - Chr2:24968244-24968263 MsG0280008065.01.T01:intron 35.0%
!! GTTTTCTTCGTTCACTGATT+GGG - Chr2:24968403-24968422 MsG0280008065.01.T01:intron 35.0%
!! TATTCAGAGGCACCAAAAAA+AGG + Chr2:24971503-24971522 None:intergenic 35.0%
!! TGCTACTTTGTTCTGAAGAT+TGG + Chr2:24971708-24971727 None:intergenic 35.0%
!!! AGTTTTAAGCGATCTAAGGA+GGG + Chr2:24971410-24971429 None:intergenic 35.0%
!!! CTTGAGTTTTAAGCGATCTA+AGG + Chr2:24971414-24971433 None:intergenic 35.0%
!!! TCAACTTCTTTTTTCAGGTG+TGG - Chr2:24971740-24971759 MsG0280008065.01.T01:CDS 35.0%
!!! TCTATTTTAGCGCGACATAT+TGG + Chr2:24971824-24971843 None:intergenic 35.0%
AACGATTCTTCATTCCCTGA+TGG + Chr2:24968380-24968399 None:intergenic 40.0%
AACTGCTTTCAGCATAGTTC+TGG + Chr2:24969875-24969894 None:intergenic 40.0%
AAGCAGTTATGAAGAGATGG+TGG - Chr2:24969887-24969906 MsG0280008065.01.T01:CDS 40.0%
AAGCTCGGATGAATGTTCTT+CGG - Chr2:24968079-24968098 MsG0280008065.01.T01:intron 40.0%
AAGGTAGCAACAATCTTGCA+AGG - Chr2:24967820-24967839 MsG0280008065.01.T01:intron 40.0%
AATGATCATGAAGGATGTGG+TGG - Chr2:24968581-24968600 MsG0280008065.01.T01:CDS 40.0%
ACCGTTTGGTTGTGTTCTAA+GGG - Chr2:24967596-24967615 MsG0280008065.01.T01:exon 40.0%
ACTTAAATTGTTACGTGGCG+CGG - Chr2:24969056-24969075 MsG0280008065.01.T01:intron 40.0%
AGAAGAGGAAAGGGTAAATG+AGG - Chr2:24970377-24970396 MsG0280008065.01.T01:CDS 40.0%
ATAAGACAGGTGATCAGAGT+AGG - Chr2:24968432-24968451 MsG0280008065.01.T01:intron 40.0%
ATCCAAACCAAACACTCCAA+TGG - Chr2:24968169-24968188 MsG0280008065.01.T01:intron 40.0%
ATGACATGCCTGAAATTGTC+AGG - Chr2:24968045-24968064 MsG0280008065.01.T01:intron 40.0%
ATGGAGAAAACAAGTCCAAC+TGG - Chr2:24968188-24968207 MsG0280008065.01.T01:intron 40.0%
ATTCGGTCGCAATATTCTCT+CGG + Chr2:24971149-24971168 None:intergenic 40.0%
ATTGTGCAGTAGAAGAGGAA+GGG - Chr2:24969844-24969863 MsG0280008065.01.T01:CDS 40.0%
CAAATCAGCAAAGACACAAG+TGG - Chr2:24969597-24969616 MsG0280008065.01.T01:CDS 40.0%
CATACAGATGTCAACTTCCA+TGG - Chr2:24969180-24969199 MsG0280008065.01.T01:CDS 40.0%
CATGGAAGTTGACATCTGTA+TGG + Chr2:24969182-24969201 None:intergenic 40.0%
CGCCATAGAATTGACAAAGT+CGG - Chr2:24969647-24969666 MsG0280008065.01.T01:CDS 40.0%
CGTCTTCCCTTGTTCAATTA+TGG - Chr2:24968120-24968139 MsG0280008065.01.T01:intron 40.0%
CTAGATGTCCTGACAATTTC+AGG + Chr2:24968056-24968075 None:intergenic 40.0%
CTCCGACTTTGTCAATTCTA+TGG + Chr2:24969652-24969671 None:intergenic 40.0%
CTGAGTCAACTTTCATCTCA+TGG + Chr2:24971629-24971648 None:intergenic 40.0%
GACAATGATCATGAAGGATG+TGG - Chr2:24968578-24968597 MsG0280008065.01.T01:CDS 40.0%
GATAGACAATGAAGGGTTGA+TGG - Chr2:24970284-24970303 MsG0280008065.01.T01:intron 40.0%
GATCTGCCATTATGCAACTA+AGG - Chr2:24969145-24969164 MsG0280008065.01.T01:CDS 40.0%
GATTGGGAATCTGATAAGAC+AGG - Chr2:24968419-24968438 MsG0280008065.01.T01:intron 40.0%
GGAAGATCTCCTCAAGAAAA+TGG - Chr2:24970333-24970352 MsG0280008065.01.T01:CDS 40.0%
GGTAGATGAAGAAGAGGAAA+GGG - Chr2:24970368-24970387 MsG0280008065.01.T01:CDS 40.0%
GGTGATGACAATGATCATGA+AGG - Chr2:24968572-24968591 MsG0280008065.01.T01:CDS 40.0%
GTCATGATGTGTACGAATTC+AGG - Chr2:24969023-24969042 MsG0280008065.01.T01:intron 40.0%
GTCTCCAAATTCGCACAAAA+AGG - Chr2:24968782-24968801 MsG0280008065.01.T01:intron 40.0%
GTCTCTATAACTCCATGATG+AGG + Chr2:24970560-24970579 None:intergenic 40.0%
GTTTCAACCTTCCTTTCTAG+TGG - Chr2:24970183-24970202 MsG0280008065.01.T01:intron 40.0%
GTTTCTTCTTGGGCTTCAAA+AGG - Chr2:24967801-24967820 MsG0280008065.01.T01:intron 40.0%
TAACGAAAATGAGCCATCCT+TGG - Chr2:24967896-24967915 MsG0280008065.01.T01:CDS 40.0%
TACAAAATGGCTGTGCTTAC+AGG - Chr2:24970766-24970785 MsG0280008065.01.T01:CDS 40.0%
TATAGAGAGATGCTTGACAC+CGG - Chr2:24969996-24970015 MsG0280008065.01.T01:CDS 40.0%
TCAACCTATCCATTGTTTCG+CGG + Chr2:24970212-24970231 None:intergenic 40.0%
TCATTGTCATCACCAGAAGA+TGG + Chr2:24968566-24968585 None:intergenic 40.0%
TCCCTTAGAACACAACCAAA+CGG + Chr2:24967600-24967619 None:intergenic 40.0%
TCTGGTGCAAATTCTTTACG+AGG + Chr2:24968626-24968645 None:intergenic 40.0%
TCTTCATTCCCTGATGGTAA+TGG + Chr2:24968374-24968393 None:intergenic 40.0%
TCTTCGGAGAAATTGAACCT+TGG - Chr2:24968095-24968114 MsG0280008065.01.T01:intron 40.0%
TGAACAAGTAACCTGAGGAA+AGG + Chr2:24968666-24968685 None:intergenic 40.0%
TGAATGATGATTGGTAGACG+AGG + Chr2:24970674-24970693 None:intergenic 40.0%
TGCATCCATCACGATGATTA+CGG + Chr2:24967623-24967642 None:intergenic 40.0%
TGTTGAAGGAAAAAGAGGGT+CGG - Chr2:24968325-24968344 MsG0280008065.01.T01:intron 40.0%
TGTTGCAGAATCAGAAGACA+TGG + Chr2:24967733-24967752 None:intergenic 40.0%
TGTTTGCACCCTTTGGTTAT+TGG + Chr2:24970912-24970931 None:intergenic 40.0%
TTACTGTGAGGAAACTTCTG+AGG - Chr2:24969746-24969765 MsG0280008065.01.T01:CDS 40.0%
TTCCAAGAACACTTGTATCC+TGG - Chr2:24970312-24970331 MsG0280008065.01.T01:intron 40.0%
TTCCAGGATACAAGTGTTCT+TGG + Chr2:24970317-24970336 None:intergenic 40.0%
TTGAAGGACCATTACCATCA+GGG - Chr2:24968363-24968382 MsG0280008065.01.T01:intron 40.0%
TTTGAAGGACCATTACCATC+AGG - Chr2:24968362-24968381 MsG0280008065.01.T01:intron 40.0%
! AATAACCAAAGGGTGCAAAC+AGG - Chr2:24970911-24970930 MsG0280008065.01.T01:CDS 40.0%
! ACATGGTAATGCACGTGTTA+AGG + Chr2:24967716-24967735 None:intergenic 40.0%
! AGATGAGAAAGAGCATGAAG+AGG - Chr2:24970456-24970475 MsG0280008065.01.T01:intron 40.0%
! CGTTTTCTTCGTTCACTGAT+TGG - Chr2:24968402-24968421 MsG0280008065.01.T01:intron 40.0%
! CTCTCTGTTCCATTTTCTTG+AGG + Chr2:24970345-24970364 None:intergenic 40.0%
! GAACTAGGAGAGGTTTTTGA+AGG - Chr2:24968347-24968366 MsG0280008065.01.T01:intron 40.0%
! TCTTTTCTGAACTTGCAGAC+TGG + Chr2:24971336-24971355 None:intergenic 40.0%
! TTTTCTTGAGGAGATCTTCC+AGG + Chr2:24970333-24970352 None:intergenic 40.0%
!! GATGTTGATTTCTGGTGTGA+TGG + Chr2:24969093-24969112 None:intergenic 40.0%
!! GTTGGACTTGTTTTCTCCAT+TGG + Chr2:24968188-24968207 None:intergenic 40.0%
!! GTTTTCTCCATTGGAGTGTT+TGG + Chr2:24968179-24968198 None:intergenic 40.0%
!! TTTGCTGATTTGATCAGCAG+TGG + Chr2:24969589-24969608 None:intergenic 40.0%
!!! CTACACATGCTGTTTTCCAA+AGG - Chr2:24967664-24967683 MsG0280008065.01.T01:CDS 40.0%
!!! GAGTTTTAAGCGATCTAAGG+AGG + Chr2:24971411-24971430 None:intergenic 40.0%
AACGATTTACGGTGGACCAA+TGG - Chr2:24971791-24971810 MsG0280008065.01.T01:CDS 45.0%
AATCGACATTGTCCACGGTT+AGG + Chr2:24971182-24971201 None:intergenic 45.0%
AATGTGCCAACGATTTACGG+TGG - Chr2:24971783-24971802 MsG0280008065.01.T01:CDS 45.0%
ACAAACCTGTTTGCACCCTT+TGG + Chr2:24970919-24970938 None:intergenic 45.0%
ACAGTTGAACCATGGTGTAG+TGG + Chr2:24971111-24971130 None:intergenic 45.0%
AGAGGAAAGGGTAAATGAGG+AGG - Chr2:24970380-24970399 MsG0280008065.01.T01:CDS 45.0%
ATGGCTGTGCTTACAGGAAA+TGG - Chr2:24970772-24970791 MsG0280008065.01.T01:CDS 45.0%
ATTCACGCCTTCTTGATCGA+TGG - Chr2:24967940-24967959 MsG0280008065.01.T01:intron 45.0%
ATTGCGACTTCTTCACCGTT+TGG - Chr2:24967582-24967601 MsG0280008065.01.T01:three_prime_UTR 45.0%
ATTGGTCCACCGTAAATCGT+TGG + Chr2:24971792-24971811 None:intergenic 45.0%
CACCGTTTGGTTGTGTTCTA+AGG - Chr2:24967595-24967614 MsG0280008065.01.T01:exon 45.0%
CGGTAGATGAAGAAGAGGAA+AGG - Chr2:24970367-24970386 MsG0280008065.01.T01:CDS 45.0%
CGTGTTGAACAAGTAACCTG+AGG + Chr2:24968671-24968690 None:intergenic 45.0%
CTAATCAACGAAGCCAAGGA+TGG + Chr2:24967912-24967931 None:intergenic 45.0%
CTGTCAAAACCACTACACCA+TGG - Chr2:24971099-24971118 MsG0280008065.01.T01:CDS 45.0%
CTGTGAATCGACATTGTCCA+CGG + Chr2:24971187-24971206 None:intergenic 45.0%
GAGAACGGTAGATGAAGAAG+AGG - Chr2:24970362-24970381 MsG0280008065.01.T01:CDS 45.0%
GAGCTTGGTTAGTAGTAGCT+TGG - Chr2:24970492-24970511 MsG0280008065.01.T01:intron 45.0%
GATTGTGCAGTAGAAGAGGA+AGG - Chr2:24969843-24969862 MsG0280008065.01.T01:CDS 45.0%
GTTGGACTTGTACTACCAGT+TGG + Chr2:24968281-24968300 None:intergenic 45.0%
TATGTTAGTGCTCGTGTCCA+AGG - Chr2:24968866-24968885 MsG0280008065.01.T01:intron 45.0%
TGACAGTTCCATGCACAATC+TGG + Chr2:24969623-24969642 None:intergenic 45.0%
TGAGACATGACAGTTGAGCT+TGG + Chr2:24969699-24969718 None:intergenic 45.0%
TGATTGGTAGACGAGGAGTT+TGG + Chr2:24970667-24970686 None:intergenic 45.0%
TGCATAATGGCAGATCCGTA+TGG + Chr2:24969141-24969160 None:intergenic 45.0%
TGGACTAATCAACGAAGCCA+AGG + Chr2:24967916-24967935 None:intergenic 45.0%
TTATGCAGTTGGAGCGTGAT+AGG - Chr2:24968723-24968742 MsG0280008065.01.T01:intron 45.0%
TTCACGCCTTCTTGATCGAT+GGG - Chr2:24967941-24967960 MsG0280008065.01.T01:intron 45.0%
TTCTCGACCGAGAAGCTATT+GGG - Chr2:24969953-24969972 MsG0280008065.01.T01:CDS 45.0%
TTGTCATCACCAGAAGATGG+AGG + Chr2:24968563-24968582 None:intergenic 45.0%
TTTCTCGACCGAGAAGCTAT+TGG - Chr2:24969952-24969971 MsG0280008065.01.T01:CDS 45.0%
TTTGGAGACAGTTCCACGTT+CGG + Chr2:24968771-24968790 None:intergenic 45.0%
! AAAGAGCATGAAGAGGAGCA+AGG - Chr2:24970463-24970482 MsG0280008065.01.T01:intron 45.0%
! CAATATTCTCTCGGTTCGAG+TGG + Chr2:24971140-24971159 None:intergenic 45.0%
! CAGGACATCTAGTTCAAGCT+CGG - Chr2:24968064-24968083 MsG0280008065.01.T01:intron 45.0%
! CTCCATTGGAGTGTTTGGTT+TGG + Chr2:24968174-24968193 None:intergenic 45.0%
! GCGACCTTTTTGTGCGAATT+TGG + Chr2:24968789-24968808 None:intergenic 45.0%
! TCAAGAAGGCGTGAATGTCT+TGG + Chr2:24967936-24967955 None:intergenic 45.0%
! TCGTGAGATGGTGTCGAATT+TGG - Chr2:24967977-24967996 MsG0280008065.01.T01:intron 45.0%
! TGGTAATGCACGTGTTAAGG+TGG + Chr2:24967713-24967732 None:intergenic 45.0%
!! AGGTTGATGCAGTCTCATAG+AGG - Chr2:24970225-24970244 MsG0280008065.01.T01:intron 45.0%
!! GCTCTTTGCTCTGAAAGTTC+TGG + Chr2:24968644-24968663 None:intergenic 45.0%
AAGGGTAAATGAGGAGGAGG+AGG - Chr2:24970386-24970405 MsG0280008065.01.T01:CDS 50.0%
ACAAGTGGCCAGATTGTGCA+TGG - Chr2:24969612-24969631 MsG0280008065.01.T01:CDS 50.0%
AGAGCAAAGAGCCTTTCCTC+AGG - Chr2:24968652-24968671 MsG0280008065.01.T01:CDS 50.0%
AGCATGAAGAGGAGCAAGGA+GGG - Chr2:24970467-24970486 MsG0280008065.01.T01:intron 50.0%
AGGGACCGTAATCATCGTGA+TGG - Chr2:24967615-24967634 MsG0280008065.01.T01:CDS 50.0%
AGTTGGAGCGTGATAGGCAT+GGG - Chr2:24968729-24968748 MsG0280008065.01.T01:intron 50.0%
CAGAGTTCACCTCCATCTTC+TGG - Chr2:24968551-24968570 MsG0280008065.01.T01:intron 50.0%
CGAGAAGCTATTGGGAAGAG+CGG - Chr2:24969961-24969980 MsG0280008065.01.T01:CDS 50.0%
CGCACAAAAAGGTCGCATTC+AGG - Chr2:24968793-24968812 MsG0280008065.01.T01:intron 50.0%
CGCTCTTCCCAATAGCTTCT+CGG + Chr2:24969963-24969982 None:intergenic 50.0%
CTAAAGAACTTGGCCGAACG+TGG - Chr2:24968755-24968774 MsG0280008065.01.T01:intron 50.0%
GCATGGGGAGCTAAAGAACT+TGG - Chr2:24968745-24968764 MsG0280008065.01.T01:intron 50.0%
GCTTCCGCGAAACAATGGAT+AGG - Chr2:24970205-24970224 MsG0280008065.01.T01:intron 50.0%
GGAAAAAGAGGGTCGGAACT+AGG - Chr2:24968332-24968351 MsG0280008065.01.T01:intron 50.0%
GGAAAGGGTAAATGAGGAGG+AGG - Chr2:24970383-24970402 MsG0280008065.01.T01:CDS 50.0%
GTTGCACTTGTCACACCAGT+TGG + Chr2:24968206-24968225 None:intergenic 50.0%
TAGTGGCTTCCGCGAAACAA+TGG - Chr2:24970200-24970219 MsG0280008065.01.T01:intron 50.0%
TTTCGCGGAAGCCACTAGAA+AGG + Chr2:24970197-24970216 None:intergenic 50.0%
AAATGAGGAGGAGGAGGAGG+AGG - Chr2:24970392-24970411 MsG0280008065.01.T01:CDS 55.0%
AAGAGGGTCGGAACTAGGAG+AGG - Chr2:24968337-24968356 MsG0280008065.01.T01:intron 55.0%
AGGATGTGGTGGTAGCAGTG+TGG - Chr2:24968592-24968611 MsG0280008065.01.T01:CDS 55.0%
CAGTTGGAGCGTGATAGGCA+TGG - Chr2:24968728-24968747 MsG0280008065.01.T01:intron 55.0%
GAACAAGGGAAGACGCACCA+AGG + Chr2:24968115-24968134 None:intergenic 55.0%
GAAGCTATTGGGAAGAGCGG+AGG - Chr2:24969964-24969983 MsG0280008065.01.T01:CDS 55.0%
GAGCATGAAGAGGAGCAAGG+AGG - Chr2:24970466-24970485 MsG0280008065.01.T01:intron 55.0%
GCATGAAGAGGAGCAAGGAG+GGG - Chr2:24970468-24970487 MsG0280008065.01.T01:intron 55.0%
GCGGAAGCCACTAGAAAGGA+AGG + Chr2:24970193-24970212 None:intergenic 55.0%
GGCTCAGCGTGATTACTGTG+AGG - Chr2:24969734-24969753 MsG0280008065.01.T01:CDS 55.0%
GGTAAATGAGGAGGAGGAGG+AGG - Chr2:24970389-24970408 MsG0280008065.01.T01:CDS 55.0%
GTTGGAGCGTGATAGGCATG+GGG - Chr2:24968730-24968749 MsG0280008065.01.T01:intron 55.0%
TCGCAGCCCATCGATCAAGA+AGG + Chr2:24967950-24967969 None:intergenic 55.0%
TGCGAGACAAGCTCGTGAGA+TGG - Chr2:24967965-24967984 MsG0280008065.01.T01:intron 55.0%
GAGGAGGAGGAGGAGGAGGA+GGG - Chr2:24970396-24970415 MsG0280008065.01.T01:CDS 65.0%
GGAGCAAGGAGGGGAGAGCT+TGG - Chr2:24970477-24970496 MsG0280008065.01.T01:intron 65.0%
GGGAAGAGCGGAGGCAAGCA+TGG - Chr2:24969973-24969992 MsG0280008065.01.T01:CDS 65.0%
TGAGGAGGAGGAGGAGGAGG+AGG - Chr2:24970395-24970414 MsG0280008065.01.T01:CDS 65.0%
GAGGAGGAGGAGGAGGAGGG+AGG - Chr2:24970402-24970421 MsG0280008065.01.T01:CDS 70.0%
GAGGAGGAGGAGGAGGGAGG+AGG - Chr2:24970405-24970424 MsG0280008065.01.T01:CDS 70.0%
GAGGAGGAGGAGGGAGGAGG+AGG - Chr2:24970408-24970427 MsG0280008065.01.T01:CDS 70.0%
GAGGAGGAGGGAGGAGGAGG+AGG - Chr2:24970411-24970430 MsG0280008065.01.T01:CDS 70.0%
GAGGAGGGAGGAGGAGGAGG+AGG - Chr2:24970414-24970433 MsG0280008065.01.T01:CDS 70.0%
GAGGGAGGAGGAGGAGGAGG+AGG - Chr2:24970417-24970436 MsG0280008065.01.T01:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - Chr2:24970398-24970417 MsG0280008065.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 24967408 24972080 24967408 ID=MsG0280008065.01;Name=MsG0280008065.01
Chr2 mRNA 24967408 24972080 24967408 ID=MsG0280008065.01.T01;Parent=MsG0280008065.01;Name=MsG0280008065.01.T01;_AED=0.23;_eAED=0.23;_QI=153|0.83|0.85|1|1|1|7|206|842
Chr2 exon 24967408 24967731 24967408 ID=MsG0280008065.01.T01:exon:40639;Parent=MsG0280008065.01.T01
Chr2 exon 24967830 24967923 24967830 ID=MsG0280008065.01.T01:exon:40638;Parent=MsG0280008065.01.T01
Chr2 exon 24968556 24968700 24968556 ID=MsG0280008065.01.T01:exon:40637;Parent=MsG0280008065.01.T01
Chr2 exon 24969099 24969312 24969099 ID=MsG0280008065.01.T01:exon:40636;Parent=MsG0280008065.01.T01
Chr2 exon 24969434 24970015 24969434 ID=MsG0280008065.01.T01:exon:40635;Parent=MsG0280008065.01.T01
Chr2 exon 24970322 24970443 24970322 ID=MsG0280008065.01.T01:exon:40634;Parent=MsG0280008065.01.T01
Chr2 exon 24970674 24972080 24970674 ID=MsG0280008065.01.T01:exon:40633;Parent=MsG0280008065.01.T01
Chr2 five_prime_UTR 24971928 24972080 24971928 ID=MsG0280008065.01.T01:five_prime_utr;Parent=MsG0280008065.01.T01
Chr2 CDS 24970674 24971927 24970674 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24970322 24970443 24970322 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24969434 24970015 24969434 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24969099 24969312 24969099 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24968556 24968700 24968556 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24967830 24967923 24967830 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 CDS 24967614 24967731 24967614 ID=MsG0280008065.01.T01:cds;Parent=MsG0280008065.01.T01
Chr2 three_prime_UTR 24967408 24967613 24967408 ID=MsG0280008065.01.T01:three_prime_utr;Parent=MsG0280008065.01.T01
Gene Sequence

>MsG0280008065.01.T01

ATGGCTTCTTCTGGTGTTGAAATTGCGACTTCTTCACCGTTTGGTTGTGTTCTAAGGGACCGTAATCATCGTGATGGATGCAGAGAAAGTAGCAAAGTTAAGGCTACACATGCTGTTTTCCAAAGGAACATCAAGAACTTTGTCATGGACCACCTTAACACGTGCATTACCATGTCTTCTGATTCTGCAACAAATGAAAACAACAATGAGAGTCAAATGAAGAACAACAACAATAACAATGTTTCTTCTTGGGCTTCAAAAGGTAGCAACAATCTTGCAAGGCTTCGTTTGAAGAGAAACAATCACAATGGCATCATCAACAACAACAATAAGGATAACGAAAATGAGCCATCCTTGGCTTCGTTGATTAGTCCAAGACATTCACGCCTTCTTGATCGATGGGCTGCGAGACAAGCTCGTGAGATGGTGTCGAATTTGGAGAATGAAGCTGAATTGTTGTCCATTGACAACACTAACAATAACAATGACATGCCTGAAATTGTCAGGACATCTAGTTCAAGCTCGGATGAATGTTCTTCGGAGAAATTGAACCTTGGTGCGTCTTCCCTTGTTCAATTATGGGAAAAGAGGCTTAACAATTCAAATGGATCCAAACCAAACACTCCAATGGAGAAAACAAGTCCAACTGGTGTGACAAGTGCAACTTGCAACAATGAGAATGTGTTTGTTGTTAACACTCCAATGGAGAAAACAAGTCCAACTGGTAGTACAAGTCCAACTTGCAACAATGAGAATGTGTTTGTTGTTGAAGGAAAAAGAGGGTCGGAACTAGGAGAGGTTTTTGAAGGACCATTACCATCAGGGAATGAAGAATCGTTTTCGTTTTCTTCGTTCACTGATTGGGAATCTGATAAGACAGGTGATCAGAGTAGGTTGTGTTCAGTTGATCAAAGTAGGAAGAATTCGTCGGAAAGTGATAGAGTTAGTGTTGCTGATATCATAAAGAAACTCACTGCTACAAGTCAAACTCAGAGTTCACCTCCATCTTCTGGTGATGACAATGATCATGAAGGATGTGGTGGTAGCAGTGTGGCAAGTTCTCCTCGTAAAGAATTTGCACCAGAACTTTCAGAGCAAAGAGCCTTTCCTCAGGTTACTTGTTCAACACGAATTAGAGGACGTCGAGCTTTCAATGATTTGCTTATGCAGTTGGAGCGTGATAGGCATGGGGAGCTAAAGAACTTGGCCGAACGTGGAACTGTCTCCAAATTCGCACAAAAAGGTCGCATTCAGGCATTACTTCGACTTAAATTGTTACGTGGCGCGGCAGCTAATGTTCCATCACACCAGAAATCAACATCATCTGAAGTAAACAGACAAGTACAACCATACGGATCTGCCATTATGCAACTAAGGAAAAATTTTAGCATTAGGGCCAAAGAAAGAAATACAGTACAGGCAGAAGTAGTGAACACACGAAGTCCTCCCAAAGAGATAGTAAACAACATCACACAATTAGAAAATTCTACCACTGCTGATCAAATCAGCAAAGACACAAGTGGCCAGATTGTGCATGGAACTGTCAGTCACGCCATAGAATTGACAAAGTCGGAGACTCAGACTAGAGAAGAAGATCATCCAAGCTCAACTGTCATGTCTCAAGAAACATGTTTTGAGGCTCAGCGTGATTACTGTGAGGAAACTTCTGAGGAAACTGCATCAATAACAGATTCAAATCTTAACGAGAAAAAGGAAATTAACCGGCAAAATGATGAAAACAGTTATGATTGTGCAGTAGAAGAGGAAGGGAGTAACCAGAACTATGCTGAAAGCAGTTATGAAGAGATGGTGGAAGAGAATTATGATGAAAATAATTATGACTGGATCAGTGAAATTTCTCGACCGAGAAGCTATTGGGAAGAGCGGAGGCAAGCATGGTATAGAGAGATGCTTGACACCGGTTCTCCAAATGAAGATATACAGGTGCTTCTTCAAAGAAGAACAGTTTCAACCTTCCTTTCTAGTGGCTTCCGCGAAACAATGGATAGGTTGATGCAGTCTCATAGAGGAACACAAACACATCTAGTTAGCAGTCAAGATGATGAGATAGACAATGAAGGGTTGATGGCGTTTTTCCAAGAACACTTGTATCCTGGAAGATCTCCTCAAGAAAATGGAACAGAGAGAACGGTAGATGAAGAAGAGGAAAGGGAAATGGATCTCATATATGATATGAGAGGCCATATGGAGCAACTTTATCAAGAGATGAGTGAACTAAGGAAATCAATAAAGAGTTGCATGGATATGCAGATGCAGATGCAGTTACAAAAATCCAATAACCAAAGGGTGCAAACAGCTGAAAAAGAAGAAAAGAAGTCACATAACAAGACTGGTAAGAAAGGAAACTGCTGCATTTGCCATGAGATGAAAGTTGACTCAGTTCTATACAGGTGTGGACACATGTGTGCATGTCTGAAATGTGCCAACGATTTACGGTGGACCAATGGAAAATGTCCAATATGTCGCGCTAAAATAGACGATGTTGTTCGAGTTTATCTTGATGTATAG
Protein sequence

>MsG0280008065.01.T01

MASSGVEIATSSPFGCVLRDRNHRDGCRESSKVKATHAVFQRNIKNFVMDHLNTCITMSSDSATNENNNESQMKNNNNNNVSSWASKGSNNLARLRLKRNNHNGIINNNNKDNENEPSLASLISPRHSRLLDRWAARQAREMVSNLENEAELLSIDNTNNNNDMPEIVRTSSSSSDECSSEKLNLGASSLVQLWEKRLNNSNGSKPNTPMEKTSPTGVTSATCNNENVFVVNTPMEKTSPTGSTSPTCNNENVFVVEGKRGSELGEVFEGPLPSGNEESFSFSSFTDWESDKTGDQSRLCSVDQSRKNSSESDRVSVADIIKKLTATSQTQSSPPSSGDDNDHEGCGGSSVASSPRKEFAPELSEQRAFPQVTCSTRIRGRRAFNDLLMQLERDRHGELKNLAERGTVSKFAQKGRIQALLRLKLLRGAAANVPSHQKSTSSEVNRQVQPYGSAIMQLRKNFSIRAKERNTVQAEVVNTRSPPKEIVNNITQLENSTTADQISKDTSGQIVHGTVSHAIELTKSETQTREEDHPSSTVMSQETCFEAQRDYCEETSEETASITDSNLNEKKEINRQNDENSYDCAVEEEGSNQNYAESSYEEMVEENYDENNYDWISEISRPRSYWEERRQAWYREMLDTGSPNEDIQVLLQRRTVSTFLSSGFRETMDRLMQSHRGTQTHLVSSQDDEIDNEGLMAFFQEHLYPGRSPQENGTERTVDEEEEREMDLIYDMRGHMEQLYQEMSELRKSIKSCMDMQMQMQLQKSNNQRVQTAEKEEKKSHNKTGKKGNCCICHEMKVDSVLYRCGHMCACLKCANDLRWTNGKCPICRAKIDDVVRVYLDV*