AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008763.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008763.01.T01 MTR_2g451450 87.658 316 28 2 97 412 26 330 0.0 559
MsG0280008763.01.T01 MTR_2g451450 93.596 203 13 0 210 412 13 215 2.71e-138 398
MsG0280008763.01.T01 MTR_2g067760 56.090 312 125 3 101 412 31 330 1.69e-116 347
MsG0280008763.01.T01 MTR_7g086110 51.258 318 134 5 101 412 5 307 9.27e-108 323
MsG0280008763.01.T01 MTR_2g101400 51.118 313 141 3 101 412 27 328 1.21e-103 314
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008763.01.T01 AT5G46150 64.762 315 100 1 98 412 25 328 1.89e-142 412
MsG0280008763.01.T01 AT5G46150 64.762 315 100 1 98 412 25 328 4.91e-142 412
MsG0280008763.01.T01 AT5G46150 64.762 315 100 1 98 412 25 328 4.91e-142 412
MsG0280008763.01.T01 AT1G54320 57.051 312 122 3 101 412 32 331 1.91e-120 357
MsG0280008763.01.T01 AT3G12740 56.731 312 123 3 101 412 33 332 6.91e-117 348
MsG0280008763.01.T01 AT1G79450 56.051 314 122 4 101 412 32 331 1.16e-115 345
MsG0280008763.01.T01 AT1G16360 55.449 312 127 3 101 412 18 317 6.21e-114 340
MsG0280008763.01.T01 AT1G16360 55.449 312 127 3 101 412 32 331 7.87e-114 340
MsG0280008763.01.T01 AT1G16360 55.449 312 127 3 101 412 18 317 8.57e-114 340
MsG0280008763.01.T01 AT1G79450 54.982 271 106 4 144 412 8 264 2.36e-94 288
MsG0280008763.01.T01 AT5G46150 61.364 220 74 1 98 317 25 233 5.17e-94 285
MsG0280008763.01.T01 AT1G16360 48.624 218 100 3 101 318 18 223 1.71e-62 204
MsG0280008763.01.T01 AT1G16360 48.624 218 100 3 101 318 18 223 1.71e-62 204

Find 85 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAAACTTGTTATCATATT+TGG 0.106951 2:-37983948 MsG0280008763.01.T01:CDS
AAATTGTTCGCGATTCTTAA+AGG 0.222184 2:-37983348 MsG0280008763.01.T01:intron
AAAAGCATTTCTAGCTAATA+AGG 0.268840 2:-37977902 MsG0280008763.01.T01:CDS
TTTCGCTTTGAAAGAATTAC+AGG 0.272797 2:+37977868 None:intergenic
AGTGACCGCGATCACAAATT+TGG 0.274721 2:-37979606 MsG0280008763.01.T01:CDS
AACTATAACACTTACAGTTT+TGG 0.277294 2:-37978686 MsG0280008763.01.T01:CDS
CATCAGAATTGAAGGTTAAT+AGG 0.289748 2:-37979647 MsG0280008763.01.T01:CDS
GAGAAGAAAATAAAATTTAG+AGG 0.293750 2:+37983046 None:intergenic
CATTGCTACATTTCTATTGA+TGG 0.300289 2:-37983613 MsG0280008763.01.T01:CDS
TTGTTACTTCTATATTCTTC+AGG 0.312194 2:+37983404 None:intergenic
ATTGATCTCCATCATCTTCC+TGG 0.339815 2:-37978567 MsG0280008763.01.T01:CDS
CGATCACAAATTTGGAAAAC+AGG 0.350003 2:-37979598 MsG0280008763.01.T01:CDS
CGGTAAAATAGAAGAGGATT+TGG 0.362798 2:-37978744 MsG0280008763.01.T01:CDS
ATCAAGAAGATCTCATAGTT+TGG 0.368552 2:-37978805 MsG0280008763.01.T01:CDS
TTTCAAAATGGTACCTTGAC+TGG 0.399882 2:-37979561 MsG0280008763.01.T01:CDS
AAAGTAGTTTCAAAACAAAA+AGG 0.402979 2:+37983854 None:intergenic
GGAATTGCTAATTTATTTGT+CGG 0.411974 2:-37978602 MsG0280008763.01.T01:CDS
CAGCAGCTCGTACATGGACT+TGG 0.416525 2:-37979786 MsG0280008763.01.T01:CDS
ATTGCTACATTTCTATTGAT+GGG 0.417238 2:-37983612 MsG0280008763.01.T01:CDS
TCTATCAACATCTAGCTGGC+TGG 0.427638 2:-37978645 MsG0280008763.01.T01:CDS
CCATGTCGTGCAGGGCGTCC+TGG 0.428820 2:+37984614 None:intergenic
ATCAATCCACAAGGTACAAT+AGG 0.435357 2:+37979714 None:intergenic
AACTAACTGCTGCAGGTGTA+AGG 0.453844 2:+37983716 None:intergenic
TGCTGCAATACCACCACAAA+TGG 0.455188 2:+37983783 None:intergenic
CTATCAACATCTAGCTGGCT+GGG 0.463891 2:-37978644 MsG0280008763.01.T01:CDS
CTATTAACCTTCAATTCTGA+TGG 0.472032 2:+37979648 None:intergenic
AACTCACCTCCATGTCGTGC+AGG 0.474371 2:+37984605 None:intergenic
GACAATAGATTGTGTTGGAA+AGG 0.482275 2:-37983018 MsG0280008763.01.T01:CDS
CGAAGTGTAACAAGTCCAAC+AGG 0.485312 2:+37983576 None:intergenic
ACAGGTGCACGGACAACTCC+AGG 0.494796 2:-37984632 MsG0280008763.01.T01:CDS
GAGTAGACCGTGTCCCCATA+AGG 0.498211 2:+37977938 None:intergenic
AGTGATCAGCAGCTCGTACA+TGG 0.501244 2:-37979792 MsG0280008763.01.T01:CDS
CTCTAAAGGTCTACAAGGAC+TGG 0.508713 2:+37979752 None:intergenic
TCGTGGACCATCAGAATTGA+AGG 0.510361 2:-37979655 MsG0280008763.01.T01:CDS
ATGAAGCACCAGGAAGATGA+TGG 0.517697 2:+37978559 None:intergenic
GATGGAGATCAATATACTAA+AGG 0.518103 2:+37978577 None:intergenic
GGAAAAGAACTAACTGCTGC+AGG 0.521706 2:+37983709 None:intergenic
AATACAAACACATGTGTGAC+AGG 0.522358 2:-37982995 MsG0280008763.01.T01:intron
TGTATTTGATAGTCGGTACA+TGG 0.526774 2:-37977812 MsG0280008763.01.T01:CDS
CCAGGACGCCCTGCACGACA+TGG 0.528691 2:-37984614 MsG0280008763.01.T01:CDS
ACCGTACAACTTTCGGAAGG+TGG 0.529549 2:+37978763 None:intergenic
TACCTTGTGGATTGATAGCA+TGG 0.531566 2:-37979707 MsG0280008763.01.T01:CDS
GATCTTCCTATTGTACCTTG+TGG 0.534128 2:-37979720 MsG0280008763.01.T01:CDS
TGTCCGTGCACCTGTGCTGA+TGG 0.537799 2:+37984640 None:intergenic
CCCACCTTCCGAAAGTTGTA+CGG 0.540007 2:-37978764 MsG0280008763.01.T01:CDS
GATGTAGGTTGTTGAAATTG+TGG 0.550572 2:-37983450 MsG0280008763.01.T01:intron
TCGGTACTTACTGGAATACT+AGG 0.551282 2:+37979522 None:intergenic
AAACAGCGATCTCGTTCTCA+TGG 0.551991 2:-37983083 MsG0280008763.01.T01:intron
TTGTTCTATCAACATCTAGC+TGG 0.552699 2:-37978649 MsG0280008763.01.T01:CDS
CAGCTTTGCACCTCCAGTCA+AGG 0.557989 2:+37979548 None:intergenic
AAACATCAACTGCAGCCTAT+CGG 0.561759 2:+37983891 None:intergenic
AAGATGTTGTATTTGATAGT+CGG 0.562042 2:-37977819 MsG0280008763.01.T01:CDS
CTTGTACTGAATGCCATTTG+TGG 0.570363 2:-37983796 MsG0280008763.01.T01:CDS
CAAATAAATTAGCAATTCCA+AGG 0.570864 2:+37978606 None:intergenic
GTAAGGACAGGTTTACATGC+TGG 0.572320 2:+37983733 None:intergenic
TTAATAGGAAAGGCATTGCA+TGG 0.573955 2:-37979632 MsG0280008763.01.T01:CDS
AGATCATTAGAAGACTCTAA+AGG 0.574000 2:+37979738 None:intergenic
TGCTTCATATGAAAAGTCCT+AGG 0.579232 2:-37978544 MsG0280008763.01.T01:intron
GAATTGAAGGTTAATAGGAA+AGG 0.587031 2:-37979642 MsG0280008763.01.T01:CDS
CCGTACAACTTTCGGAAGGT+GGG 0.587134 2:+37978764 None:intergenic
GTTGTACGGTAAAATAGAAG+AGG 0.588169 2:-37978750 MsG0280008763.01.T01:CDS
CAAAATGGTACCTTGACTGG+AGG 0.588617 2:-37979558 MsG0280008763.01.T01:CDS
AAATTGACAATAGATTGTGT+TGG 0.592269 2:-37983023 MsG0280008763.01.T01:CDS
AAGATCTCATAGTTTGGATG+CGG 0.596529 2:-37978799 MsG0280008763.01.T01:CDS
AGTTCATCAACCATCAGCAC+AGG 0.601565 2:-37984650 MsG0280008763.01.T01:CDS
CTCCATGCTATCAATCCACA+AGG 0.605947 2:+37979705 None:intergenic
ACTGCTGCAGGTGTAAGGAC+AGG 0.608324 2:+37983721 None:intergenic
ACTCACCTCCATGTCGTGCA+GGG 0.622234 2:+37984606 None:intergenic
GGGACACGGTCTACTCAACA+TGG 0.623879 2:-37977931 MsG0280008763.01.T01:CDS
CAACCATCAGCACAGGTGCA+CGG 0.624161 2:-37984643 MsG0280008763.01.T01:CDS
GAAGACTCTAAAGGTCTACA+AGG 0.624493 2:+37979747 None:intergenic
TTTACCGTACAACTTTCGGA+AGG 0.635260 2:+37978760 None:intergenic
TAGTGATGGATGTCGATGGT+GGG 0.640055 2:-37984673 None:intergenic
GGACAGGTTTACATGCTGGA+AGG 0.643420 2:+37983737 None:intergenic
GTTCCATTAAGAAAAGAGCA+AGG 0.644372 2:+37983818 None:intergenic
ATGCAGACCTTATGGGGACA+CGG 0.649450 2:-37977945 MsG0280008763.01.T01:CDS
GTACTGAATGCCATTTGTGG+TGG 0.669010 2:-37983793 MsG0280008763.01.T01:CDS
GTAAGACAGAGTTATCCGAT+AGG 0.673949 2:-37983906 MsG0280008763.01.T01:CDS
GTAGTGATGGATGTCGATGG+TGG 0.682689 2:-37984674 None:intergenic
TCAACATCTAGCTGGCTGGG+TGG 0.687856 2:-37978641 MsG0280008763.01.T01:CDS
GGACGCCCTGCACGACATGG+AGG 0.695799 2:-37984611 MsG0280008763.01.T01:CDS
GATACATACAAATTCCGTCG+TGG 0.699029 2:-37979672 MsG0280008763.01.T01:CDS
GCTGTAGTGATGGATGTCGA+TGG 0.707073 2:-37984677 None:intergenic
TCAATTCTGATGGTCCACGA+CGG 0.712783 2:+37979658 None:intergenic
TTTCTAGCTAATAAGGTACG+TGG 0.723570 2:-37977895 MsG0280008763.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTACTATATAATAAAT+TGG - Chr2:37979156-37979175 MsG0280008763.01.T01:intron 10.0%
!! CCAAAAAAAAAAAAAAATAA+AGG + Chr2:37983415-37983434 None:intergenic 10.0%
!!! CCTATTTATTTTATATAATT+GGG - Chr2:37980905-37980924 MsG0280008763.01.T01:intron 10.0%
!!! CCTTTATTTTTTTTTTTTTT+TGG - Chr2:37983412-37983431 MsG0280008763.01.T01:CDS 10.0%
!!! CTATTTATTTTATATAATTG+GGG - Chr2:37980906-37980925 MsG0280008763.01.T01:intron 10.0%
!!! TATAAATTAATCTTGTATTT+TGG + Chr2:37978115-37978134 None:intergenic 10.0%
!!! TCCTATTTATTTTATATAAT+TGG - Chr2:37980904-37980923 MsG0280008763.01.T01:intron 10.0%
!! AAAAAGCAAATATTCAATTA+TGG + Chr2:37983911-37983930 None:intergenic 15.0%
!! AAATACAATACTATTAAACT+AGG + Chr2:37979677-37979696 None:intergenic 15.0%
!! AACAATATCATAAACTATAA+CGG + Chr2:37982121-37982140 None:intergenic 15.0%
!! ATTCTATTCTATCATAATTT+CGG - Chr2:37981281-37981300 MsG0280008763.01.T01:intron 15.0%
!! CAATTAAAACTAATCATAAT+TGG + Chr2:37979279-37979298 None:intergenic 15.0%
!! CCCAATTATATAAAATAAAT+AGG + Chr2:37980908-37980927 None:intergenic 15.0%
!! TATCTAATATGTAAAGAATT+GGG - Chr2:37978359-37978378 MsG0280008763.01.T01:intron 15.0%
!! TATTACAAAATACAAAGTAT+TGG + Chr2:37983110-37983129 None:intergenic 15.0%
!! TTATCTAATATGTAAAGAAT+TGG - Chr2:37978358-37978377 MsG0280008763.01.T01:intron 15.0%
!!! AAAATATTCACAATTTGTTT+AGG - Chr2:37982585-37982604 MsG0280008763.01.T01:intron 15.0%
!!! ATAAAACTTGTTATCATATT+TGG - Chr2:37978467-37978486 MsG0280008763.01.T01:intron 15.0%
!!! ATTACAAAATACAAAGTATT+GGG + Chr2:37983109-37983128 None:intergenic 15.0%
!!! GTAATCATTTTTAAACTATT+GGG + Chr2:37983057-37983076 None:intergenic 15.0%
!!! GTTTTAATTGAAAACTTAAT+TGG - Chr2:37979289-37979308 MsG0280008763.01.T01:intron 15.0%
!!! TAATTTATAAATCTGAAGTT+AGG + Chr2:37978333-37978352 None:intergenic 15.0%
!!! TACCATTTTGAAAATTAAAT+GGG + Chr2:37982847-37982866 None:intergenic 15.0%
!!! TATTAAGAACTTTTATTTTG+AGG - Chr2:37984061-37984080 MsG0280008763.01.T01:intron 15.0%
!!! TGTAATCATTTTTAAACTAT+TGG + Chr2:37983058-37983077 None:intergenic 15.0%
!! AAAGTAGTTTCAAAACAAAA+AGG + Chr2:37978564-37978583 None:intergenic 20.0%
!! AACATGAAAAATATCAAAAG+TGG + Chr2:37980824-37980843 None:intergenic 20.0%
!! ACATGAAAAATATCAAAAGT+GGG + Chr2:37980823-37980842 None:intergenic 20.0%
!! ACCATAAAATATTCAAGTAT+TGG + Chr2:37978730-37978749 None:intergenic 20.0%
!! AGATAGATAAGTAATAAGAA+AGG + Chr2:37980568-37980587 None:intergenic 20.0%
!! AGCTGATAATAGATATAAAT+CGG + Chr2:37981430-37981449 None:intergenic 20.0%
!! ATAAGTATGTAGATATTGAA+GGG + Chr2:37978931-37978950 None:intergenic 20.0%
!! ATACAGAAATGAAAATGTTA+AGG + Chr2:37983298-37983317 None:intergenic 20.0%
!! ATCAAAAACATACAAAGATA+AGG + Chr2:37981604-37981623 None:intergenic 20.0%
!! ATTAAAAAGCTAAACCTATT+TGG + Chr2:37980133-37980152 None:intergenic 20.0%
!! CAATATAATGTGTTTCATAA+AGG - Chr2:37978443-37978462 MsG0280008763.01.T01:intron 20.0%
!! CTAAAAACTTAAATTGTAGT+CGG - Chr2:37978268-37978287 MsG0280008763.01.T01:intron 20.0%
!! GACTTATTATCTCTATAATA+TGG - Chr2:37981040-37981059 MsG0280008763.01.T01:intron 20.0%
!! GAGAAGAAAATAAAATTTAG+AGG + Chr2:37979372-37979391 None:intergenic 20.0%
!! GATAAAAAAAATTGACTAGT+GGG + Chr2:37982144-37982163 None:intergenic 20.0%
!! TATACAACAAAATCATCTAT+AGG + Chr2:37977918-37977937 None:intergenic 20.0%
!! TCACAACTAATATCAATATT+TGG - Chr2:37978142-37978161 MsG0280008763.01.T01:intron 20.0%
!! TGATCTTTCAAAAATATTGT+TGG - Chr2:37981773-37981792 MsG0280008763.01.T01:intron 20.0%
!! TTAAAAAGCTAAACCTATTT+GGG + Chr2:37980132-37980151 None:intergenic 20.0%
!! TTAATCCACTAATAATTCAA+AGG - Chr2:37980061-37980080 MsG0280008763.01.T01:intron 20.0%
!! TTCTAAGCAAATAATATCAT+AGG + Chr2:37984355-37984374 None:intergenic 20.0%
!! TTCTATTCTATCATAATTTC+GGG - Chr2:37981282-37981301 MsG0280008763.01.T01:intron 20.0%
!! TTGAAAATACTCTTGTATTA+TGG + Chr2:37980847-37980866 None:intergenic 20.0%
!!! ATAAAATTTCTCTGTTTTCT+TGG + Chr2:37980289-37980308 None:intergenic 20.0%
!!! ATTACTTGAGTTTTTAATGT+CGG - Chr2:37983316-37983335 MsG0280008763.01.T01:intron 20.0%
!!! ATTGTTATTGTTATGAATGT+TGG - Chr2:37983077-37983096 MsG0280008763.01.T01:CDS 20.0%
!!! ATTTGATTTATAGTCGATAA+TGG - Chr2:37984191-37984210 MsG0280008763.01.T01:intron 20.0%
!!! GTACCATTTTGAAAATTAAA+TGG + Chr2:37982848-37982867 None:intergenic 20.0%
!!! TAAAATTTCTCTGTTTTCTT+GGG + Chr2:37980288-37980307 None:intergenic 20.0%
!!! TACCCATTTAATTTTCAAAA+TGG - Chr2:37982842-37982861 MsG0280008763.01.T01:intron 20.0%
!!! TAGTCAATTTTTTTTATCGT+GGG - Chr2:37982146-37982165 MsG0280008763.01.T01:intron 20.0%
!!! TCCAATACTTGAATATTTTA+TGG - Chr2:37978726-37978745 MsG0280008763.01.T01:CDS 20.0%
!!! TTACTTTTTAGTCTATGTAA+AGG + Chr2:37978493-37978512 None:intergenic 20.0%
!!! TTTCTGAGAATTCATATTTT+GGG + Chr2:37980429-37980448 None:intergenic 20.0%
!!! TTTTCTGAGAATTCATATTT+TGG + Chr2:37980430-37980449 None:intergenic 20.0%
!!! TTTTTTAGTGAAACTTCTAT+TGG - Chr2:37983164-37983183 MsG0280008763.01.T01:intron 20.0%
! AAAATGAATTTCCCTAGTTT+AGG + Chr2:37980165-37980184 None:intergenic 25.0%
! AAAGATCAGTAATTTAGTTG+AGG + Chr2:37981761-37981780 None:intergenic 25.0%
! AAAGCTAGTAAATATGTCAA+TGG + Chr2:37981822-37981841 None:intergenic 25.0%
! AAATTGACAATAGATTGTGT+TGG - Chr2:37979392-37979411 MsG0280008763.01.T01:intron 25.0%
! AATAATTCAAAGGATTTCGA+TGG - Chr2:37980071-37980090 MsG0280008763.01.T01:intron 25.0%
! AATATTAAGCAGCATTTACT+TGG - Chr2:37983355-37983374 MsG0280008763.01.T01:CDS 25.0%
! ATATTAAGCAGCATTTACTT+GGG - Chr2:37983356-37983375 MsG0280008763.01.T01:CDS 25.0%
! ATGAAGTTGAAATTAAATCC+AGG + Chr2:37982542-37982561 None:intergenic 25.0%
! ATTGCTACATTTCTATTGAT+GGG - Chr2:37978803-37978822 MsG0280008763.01.T01:CDS 25.0%
! CAAATAAATTAGCAATTCCA+AGG + Chr2:37983812-37983831 None:intergenic 25.0%
! CAATACTATTAAACTAGGAT+TGG + Chr2:37979672-37979691 None:intergenic 25.0%
! CGATAAAAAAAATTGACTAG+TGG + Chr2:37982145-37982164 None:intergenic 25.0%
! GAAATCCTTTGAATTATTAG+TGG + Chr2:37980069-37980088 None:intergenic 25.0%
! GATAAGTATGTAGATATTGA+AGG + Chr2:37978932-37978951 None:intergenic 25.0%
! GGAATTGCTAATTTATTTGT+CGG - Chr2:37983813-37983832 MsG0280008763.01.T01:CDS 25.0%
! TATGTATCAGTATCATTTAC+TGG - Chr2:37982196-37982215 MsG0280008763.01.T01:intron 25.0%
! TATTACACGCAATGATTATT+AGG + Chr2:37979762-37979781 None:intergenic 25.0%
! TCACAATATGTATTTGATGT+AGG - Chr2:37978950-37978969 MsG0280008763.01.T01:intron 25.0%
! TCACATCAATAAACTAATAG+AGG - Chr2:37984118-37984137 MsG0280008763.01.T01:intron 25.0%
! TCTTAATAACAACTAGATGT+AGG + Chr2:37984049-37984068 None:intergenic 25.0%
! TGAATAAGCAAGAGAAATAA+AGG + Chr2:37982566-37982585 None:intergenic 25.0%
! TGCTAGTTATTGTATAATCA+TGG - Chr2:37984255-37984274 MsG0280008763.01.T01:intron 25.0%
! TGTTTAGGTATGTAAAAAGT+AGG - Chr2:37982600-37982619 MsG0280008763.01.T01:intron 25.0%
! TTAAAAAAGTCAGTATCAGT+AGG + Chr2:37983497-37983516 None:intergenic 25.0%
!! AAAAGTGGGTCTTATAATAT+GGG + Chr2:37980809-37980828 None:intergenic 25.0%
!! AAAATTTCTCTGTTTTCTTG+GGG + Chr2:37980287-37980306 None:intergenic 25.0%
!! AACTATAACACTTACAGTTT+TGG - Chr2:37983729-37983748 MsG0280008763.01.T01:CDS 25.0%
!! AAGATGTTGTATTTGATAGT+CGG - Chr2:37984596-37984615 MsG0280008763.01.T01:CDS 25.0%
!! AAGTAAATGCTGCTTAATAT+TGG + Chr2:37983356-37983375 None:intergenic 25.0%
!! ATGAATTGTTGAATGGTTTT+AGG - Chr2:37981923-37981942 MsG0280008763.01.T01:intron 25.0%
!! ATTGACATATTTACTAGCTT+TGG - Chr2:37981821-37981840 MsG0280008763.01.T01:intron 25.0%
!! CAAATCACTTGAATGATTTT+CGG - Chr2:37983204-37983223 MsG0280008763.01.T01:intron 25.0%
!! CTATAGCGTATTTTGTATTT+TGG + Chr2:37978188-37978207 None:intergenic 25.0%
!! TTACTTGAGTTTTTAATGTC+GGG - Chr2:37983317-37983336 MsG0280008763.01.T01:intron 25.0%
!! TTGTCAATAGACTTTTAAAC+TGG - Chr2:37984161-37984180 MsG0280008763.01.T01:intron 25.0%
!! TTGTTACTTCTATATTCTTC+AGG + Chr2:37979014-37979033 None:intergenic 25.0%
!!! AAAAGCATTTCTAGCTAATA+AGG - Chr2:37984513-37984532 MsG0280008763.01.T01:intron 25.0%
!!! AAATTTTGGAAATTCTTGCT+AGG - Chr2:37982386-37982405 MsG0280008763.01.T01:intron 25.0%
!!! ATATTTTTGGTGGAAAAGAA+TGG + Chr2:37982512-37982531 None:intergenic 25.0%
!!! CCTAAAATAATGGATTAAAC+GGG - Chr2:37979537-37979556 MsG0280008763.01.T01:CDS 25.0%
!!! CTAGTCAATTTTTTTTATCG+TGG - Chr2:37982145-37982164 MsG0280008763.01.T01:intron 25.0%
!!! GAGTATTGACATTTTTCAAT+CGG + Chr2:37979834-37979853 None:intergenic 25.0%
!!! GCCTAAAATAATGGATTAAA+CGG - Chr2:37979536-37979555 MsG0280008763.01.T01:CDS 25.0%
!!! TTAATCCATTATTTTAGGCA+GGG + Chr2:37979535-37979554 None:intergenic 25.0%
!!! TTTAATCCATTATTTTAGGC+AGG + Chr2:37979536-37979555 None:intergenic 25.0%
AAAAGAAAATAGATCTCCGT+AGG + Chr2:37983384-37983403 None:intergenic 30.0%
AAATGAGAGGATGAAAAACT+TGG + Chr2:37980469-37980488 None:intergenic 30.0%
AAATGTACCCATGATTGTTT+AGG + Chr2:37982363-37982382 None:intergenic 30.0%
AAATTGTTCGCGATTCTTAA+AGG - Chr2:37979067-37979086 MsG0280008763.01.T01:intron 30.0%
AACACAATATAAGAGGTTAC+AGG + Chr2:37980209-37980228 None:intergenic 30.0%
AAGGAGTAACACAATATAAG+AGG + Chr2:37980216-37980235 None:intergenic 30.0%
AAGTTGAAGTAACCTCTTTA+TGG + Chr2:37979950-37979969 None:intergenic 30.0%
AATAGGTGAAAATTAGGCAA+AGG + Chr2:37983000-37983019 None:intergenic 30.0%
AATATTCAACCACCTAAACT+AGG - Chr2:37980150-37980169 MsG0280008763.01.T01:intron 30.0%
ACAAAGAAGGTTTCAAATCT+TGG + Chr2:37980524-37980543 None:intergenic 30.0%
ACCAAAAATATACATTCTCC+TGG - Chr2:37982521-37982540 MsG0280008763.01.T01:intron 30.0%
ACGGATAATATGCATTGAAA+TGG + Chr2:37978406-37978425 None:intergenic 30.0%
ACTGTATCGAAAAACATTTC+TGG - Chr2:37982444-37982463 MsG0280008763.01.T01:intron 30.0%
ACTTAAATTGTAGTCGGTTA+AGG - Chr2:37978274-37978293 MsG0280008763.01.T01:intron 30.0%
AGATCATTAGAAGACTCTAA+AGG + Chr2:37982680-37982699 None:intergenic 30.0%
ATACGGGTAAGAAAAGAAAA+AGG + Chr2:37977980-37977999 None:intergenic 30.0%
ATATTCAACCACCTAAACTA+GGG - Chr2:37980151-37980170 MsG0280008763.01.T01:intron 30.0%
ATATTTGGTTATTGATGTGC+TGG - Chr2:37978157-37978176 MsG0280008763.01.T01:intron 30.0%
ATCAAGAAGATCTCATAGTT+TGG - Chr2:37983610-37983629 MsG0280008763.01.T01:CDS 30.0%
ATGAAAATGTTAAGGACTTC+AGG + Chr2:37983290-37983309 None:intergenic 30.0%
ATTAGCATAATAGCTAGACT+GGG - Chr2:37979639-37979658 MsG0280008763.01.T01:CDS 30.0%
CAAAATACGATTCAAAAGCT+CGG + Chr2:37982915-37982934 None:intergenic 30.0%
CAAAGAAGGTTTCAAATCTT+GGG + Chr2:37980523-37980542 None:intergenic 30.0%
CATCAGAATTGAAGGTTAAT+AGG - Chr2:37982768-37982787 MsG0280008763.01.T01:intron 30.0%
CATTGCTACATTTCTATTGA+TGG - Chr2:37978802-37978821 MsG0280008763.01.T01:CDS 30.0%
CTACAATTCATTCTTTCCTA+GGG + Chr2:37980722-37980741 None:intergenic 30.0%
CTATTAACCTTCAATTCTGA+TGG + Chr2:37982770-37982789 None:intergenic 30.0%
CTGAAATACAGAAATCAGAA+TGG + Chr2:37983583-37983602 None:intergenic 30.0%
CTGTCAAATAGGTGAAAATT+AGG + Chr2:37983006-37983025 None:intergenic 30.0%
GAAAGATTGCAATTACAAGA+TGG + Chr2:37981092-37981111 None:intergenic 30.0%
GAATTGAAGGTTAATAGGAA+AGG - Chr2:37982773-37982792 MsG0280008763.01.T01:intron 30.0%
GATGGAGATCAATATACTAA+AGG + Chr2:37983841-37983860 None:intergenic 30.0%
GTGTGTTTGAAAACTATTGT+TGG - Chr2:37981018-37981037 MsG0280008763.01.T01:intron 30.0%
TAATATGCATTGAAATGGCA+TGG + Chr2:37978401-37978420 None:intergenic 30.0%
TACTTCCATTTACTTTCTTG+TGG - Chr2:37979472-37979491 MsG0280008763.01.T01:intron 30.0%
TAGTAAGCAGATAACTTAAC+AGG - Chr2:37978006-37978025 MsG0280008763.01.T01:intron 30.0%
TATCTTAAATCTGCCCAAAT+AGG - Chr2:37980116-37980135 MsG0280008763.01.T01:intron 30.0%
TATGGTTGAAAACAATCTCA+TGG + Chr2:37979932-37979951 None:intergenic 30.0%
TCAATTATTTACACCGTTCT+TGG - Chr2:37979104-37979123 MsG0280008763.01.T01:intron 30.0%
TCTACAATTCATTCTTTCCT+AGG + Chr2:37980723-37980742 None:intergenic 30.0%
TGAATCATGCAAATCTTAAC+CGG - Chr2:37981156-37981175 MsG0280008763.01.T01:intron 30.0%
TTAGACCACAAGAAAGTAAA+TGG + Chr2:37979480-37979499 None:intergenic 30.0%
! AAAGTGGGTCTTATAATATG+GGG + Chr2:37980808-37980827 None:intergenic 30.0%
! AAGATTTGAAACCTTCTTTG+TGG - Chr2:37980523-37980542 MsG0280008763.01.T01:intron 30.0%
! ATAATTTCTTGTTTGCTGAC+AGG + Chr2:37984099-37984118 None:intergenic 30.0%
! ATAGACTTTTAAACTGGTAG+TGG - Chr2:37984167-37984186 MsG0280008763.01.T01:intron 30.0%
! CAAAAGTGGGTCTTATAATA+TGG + Chr2:37980810-37980829 None:intergenic 30.0%
! CCCGTTTAATCCATTATTTT+AGG + Chr2:37979540-37979559 None:intergenic 30.0%
! CTATTTTACCGTACAACTTT+CGG + Chr2:37983662-37983681 None:intergenic 30.0%
! GAAGTATCAAATGCATAGTT+GGG - Chr2:37981898-37981917 MsG0280008763.01.T01:intron 30.0%
! GATTGTTTTCAACCATAAAG+AGG - Chr2:37979935-37979954 MsG0280008763.01.T01:intron 30.0%
! GGTGAGTTTACTTTCTTTTT+AGG - Chr2:37977825-37977844 MsG0280008763.01.T01:CDS 30.0%
! TAAGAATCGCGAACAATTTT+TGG + Chr2:37979066-37979085 None:intergenic 30.0%
! TACTTGAGTTTTTAATGTCG+GGG - Chr2:37983318-37983337 MsG0280008763.01.T01:intron 30.0%
! TCCAGGAGAATGTATATTTT+TGG + Chr2:37982525-37982544 None:intergenic 30.0%
! TGAAGTATCAAATGCATAGT+TGG - Chr2:37981897-37981916 MsG0280008763.01.T01:intron 30.0%
! TGGGTACATTTGTCAAATTT+TGG - Chr2:37982372-37982391 MsG0280008763.01.T01:intron 30.0%
! TGTGCGAAACTTTTATCATT+TGG - Chr2:37981243-37981262 MsG0280008763.01.T01:intron 30.0%
!! AAATAATGGATTAAACGGGT+TGG - Chr2:37979541-37979560 MsG0280008763.01.T01:CDS 30.0%
!! AGTTTACTTTCTTTTTAGGC+AGG - Chr2:37977829-37977848 MsG0280008763.01.T01:CDS 30.0%
!! TATAACACTTACAGTTTTGG+AGG - Chr2:37983732-37983751 MsG0280008763.01.T01:CDS 30.0%
!! TATATTGTCAAGTTGAGAGA+AGG + Chr2:37978430-37978449 None:intergenic 30.0%
!! TTTCGCTTTGAAAGAATTAC+AGG + Chr2:37984550-37984569 None:intergenic 30.0%
!!! AGGAGAATGTATATTTTTGG+TGG + Chr2:37982522-37982541 None:intergenic 30.0%
!!! CTTGTTTTGATCTAAAACAC+TGG - Chr2:37982963-37982982 MsG0280008763.01.T01:intron 30.0%
!!! TTGTTTTAGTCTACCTTTCA+GGG - Chr2:37983236-37983255 MsG0280008763.01.T01:intron 30.0%
!!! TTTGTTTTAGTCTACCTTTC+AGG - Chr2:37983235-37983254 MsG0280008763.01.T01:intron 30.0%
!!! TTTTTTATCGTGGGATCTAT+GGG - Chr2:37982155-37982174 MsG0280008763.01.T01:intron 30.0%
!!! TTTTTTTATCGTGGGATCTA+TGG - Chr2:37982154-37982173 MsG0280008763.01.T01:intron 30.0%
AAAACAAAAAGGCTCGTGTA+AGG + Chr2:37978553-37978572 None:intergenic 35.0%
AAAATGTTAAGGACTTCAGG+TGG + Chr2:37983287-37983306 None:intergenic 35.0%
AACAAGTTGTCACACAAGAA+AGG + Chr2:37982949-37982968 None:intergenic 35.0%
AAGATCTCATAGTTTGGATG+CGG - Chr2:37983616-37983635 MsG0280008763.01.T01:CDS 35.0%
AAGCCATCATCATCTATTAC+CGG + Chr2:37981178-37981197 None:intergenic 35.0%
AATACAAACACATGTGTGAC+AGG - Chr2:37979420-37979439 MsG0280008763.01.T01:intron 35.0%
AATGACAACATGCAAATGAG+AGG + Chr2:37980482-37980501 None:intergenic 35.0%
ACCACTCATTTAAATGCAGA+AGG + Chr2:37979192-37979211 None:intergenic 35.0%
ACGTTTCTCCTAAACAATCA+TGG - Chr2:37982352-37982371 MsG0280008763.01.T01:intron 35.0%
AGAAATCAGAATGGTCAACA+GGG + Chr2:37983574-37983593 None:intergenic 35.0%
AGTACTGTTGTAGAGGAAAT+TGG + Chr2:37979890-37979909 None:intergenic 35.0%
ATAAGAAAGGACAGAATCTG+AGG + Chr2:37980555-37980574 None:intergenic 35.0%
ATCAATCCACAAGGTACAAT+AGG + Chr2:37982704-37982723 None:intergenic 35.0%
ATGAATTTCCCTAGTTTAGG+TGG + Chr2:37980162-37980181 None:intergenic 35.0%
ATTCTATCATAATTTCGGGC+TGG - Chr2:37981286-37981305 MsG0280008763.01.T01:intron 35.0%
ATTTACAAACCTCTCTACTG+TGG - Chr2:37979248-37979267 MsG0280008763.01.T01:intron 35.0%
CAGTCTAGCTATTATGCTAA+TGG + Chr2:37979640-37979659 None:intergenic 35.0%
CATATTATCCAAGTGCTCTT+AGG - Chr2:37982311-37982330 MsG0280008763.01.T01:intron 35.0%
CATTAGCATAATAGCTAGAC+TGG - Chr2:37979638-37979657 MsG0280008763.01.T01:CDS 35.0%
CGATCACAAATTTGGAAAAC+AGG - Chr2:37982817-37982836 MsG0280008763.01.T01:intron 35.0%
CGGTAAAATAGAAGAGGATT+TGG - Chr2:37983671-37983690 MsG0280008763.01.T01:intron 35.0%
CGTTTCTCCTAAACAATCAT+GGG - Chr2:37982353-37982372 MsG0280008763.01.T01:intron 35.0%
CTCAAGCTCAACAAATGATT+GGG + Chr2:37984424-37984443 None:intergenic 35.0%
CTGAAGCAATAATCCAAGAA+CGG + Chr2:37979120-37979139 None:intergenic 35.0%
GAAGTTTAGTACTGTTGTAG+AGG + Chr2:37979897-37979916 None:intergenic 35.0%
GACAATAGATTGTGTTGGAA+AGG - Chr2:37979397-37979416 MsG0280008763.01.T01:intron 35.0%
GATCTTTCCTTAGAACAATG+TGG - Chr2:37980696-37980715 MsG0280008763.01.T01:intron 35.0%
GATGTAGGTTGTTGAAATTG+TGG - Chr2:37978965-37978984 MsG0280008763.01.T01:intron 35.0%
GGCTTAAGTCATTGTTGAAA+AGG - Chr2:37981193-37981212 MsG0280008763.01.T01:intron 35.0%
GGGTAGGATGCAAAATATTA+GGG - Chr2:37977871-37977890 MsG0280008763.01.T01:CDS 35.0%
GGTAGGATGCAAAATATTAG+GGG - Chr2:37977872-37977891 MsG0280008763.01.T01:CDS 35.0%
GTAGGATGCAAAATATTAGG+GGG - Chr2:37977873-37977892 MsG0280008763.01.T01:CDS 35.0%
GTATGAAAAATTGCCCTGAA+AGG + Chr2:37983252-37983271 None:intergenic 35.0%
GTGAAAATTAGGCAAAGGAA+AGG + Chr2:37982995-37983014 None:intergenic 35.0%
GTTCCATTAAGAAAAGAGCA+AGG + Chr2:37978600-37978619 None:intergenic 35.0%
GTTGTACGGTAAAATAGAAG+AGG - Chr2:37983665-37983684 MsG0280008763.01.T01:intron 35.0%
TAAAAAATCCTTACCGTCGA+TGG + Chr2:37981471-37981490 None:intergenic 35.0%
TAACCGGTAATAGATGATGA+TGG - Chr2:37981172-37981191 MsG0280008763.01.T01:intron 35.0%
TAAGAGGTTACAGGTGATAA+AGG + Chr2:37980200-37980219 None:intergenic 35.0%
TACCAAGAACTCTGTCAAAT+AGG + Chr2:37983017-37983036 None:intergenic 35.0%
TATAGCGTCCAATTCATGTA+AGG + Chr2:37978052-37978071 None:intergenic 35.0%
TCAAGCTCAACAAATGATTG+GGG + Chr2:37984423-37984442 None:intergenic 35.0%
TCCTTCTGCATTTAAATGAG+TGG - Chr2:37979188-37979207 MsG0280008763.01.T01:intron 35.0%
TCTGCATTTAAATGAGTGGT+TGG - Chr2:37979192-37979211 MsG0280008763.01.T01:intron 35.0%
TCTGCTTACTACAGATCATA+CGG + Chr2:37977997-37978016 None:intergenic 35.0%
TGCTTAATATTGGACGATGA+AGG + Chr2:37983346-37983365 None:intergenic 35.0%
TGCTTCATATGAAAAGTCCT+AGG - Chr2:37983871-37983890 MsG0280008763.01.T01:CDS 35.0%
TGGACACTGTTATATTACCT+AGG + Chr2:37983891-37983910 None:intergenic 35.0%
TGGCTTCCAATGATTATAAG+AGG + Chr2:37979221-37979240 None:intergenic 35.0%
TGGCTTCCTCTTATAATCAT+TGG - Chr2:37979212-37979231 MsG0280008763.01.T01:intron 35.0%
TTCTATCATAATTTCGGGCT+GGG - Chr2:37981287-37981306 MsG0280008763.01.T01:intron 35.0%
TTGGGAGATGAATTGTTGAA+TGG - Chr2:37981916-37981935 MsG0280008763.01.T01:intron 35.0%
TTGTTCTATCAACATCTAGC+TGG - Chr2:37983766-37983785 MsG0280008763.01.T01:CDS 35.0%
TTTACTGGTCGTCTCAATAT+TGG - Chr2:37982211-37982230 MsG0280008763.01.T01:intron 35.0%
TTTCAAAATGGTACCTTGAC+TGG - Chr2:37982854-37982873 MsG0280008763.01.T01:intron 35.0%
! ACATTTAGCTATAGCCTTGA+AGG - Chr2:37978209-37978228 MsG0280008763.01.T01:intron 35.0%
! AGGTTTTCAACGATTTCTGT+TGG - Chr2:37977849-37977868 MsG0280008763.01.T01:CDS 35.0%
! ATGTAGTTGTTAGAAGTGTG+TGG + Chr2:37980782-37980801 None:intergenic 35.0%
! CGAGCTTTTGAATCGTATTT+TGG - Chr2:37982913-37982932 MsG0280008763.01.T01:intron 35.0%
! GAGCTGTATTTTCAGATGAA+AGG + Chr2:37980235-37980254 None:intergenic 35.0%
! GGTTTTCAACGATTTCTGTT+GGG - Chr2:37977850-37977869 MsG0280008763.01.T01:CDS 35.0%
! GTTTTCAACGATTTCTGTTG+GGG - Chr2:37977851-37977870 MsG0280008763.01.T01:CDS 35.0%
! GTTTTCCAAATTTGTGATCG+CGG + Chr2:37982817-37982836 None:intergenic 35.0%
! GTTTTTGATGCAGACCTTAT+GGG - Chr2:37984463-37984482 MsG0280008763.01.T01:intron 35.0%
! TGTAGTTGTTAGAAGTGTGT+GGG + Chr2:37980781-37980800 None:intergenic 35.0%
! TGTATTTGATAGTCGGTACA+TGG - Chr2:37984603-37984622 MsG0280008763.01.T01:CDS 35.0%
! TTGCCTTGCTCTTTTCTTAA+TGG - Chr2:37978594-37978613 MsG0280008763.01.T01:CDS 35.0%
! TTTTTGATGCAGACCTTATG+GGG - Chr2:37984464-37984483 MsG0280008763.01.T01:intron 35.0%
!! AAACATTTCTGGTCTTGTCA+AGG - Chr2:37982455-37982474 MsG0280008763.01.T01:intron 35.0%
!! ATGCTGCACTTGCTATTATT+TGG - Chr2:37983962-37983981 MsG0280008763.01.T01:intron 35.0%
!! ATTAGGGGGTACTGTATAAA+AGG - Chr2:37977887-37977906 MsG0280008763.01.T01:CDS 35.0%
!! CTGAGAATTCATATTTTGGG+AGG + Chr2:37980426-37980445 None:intergenic 35.0%
!! GAGCTCTGAAATCAGTTATT+AGG - Chr2:37980632-37980651 MsG0280008763.01.T01:intron 35.0%
!! TTAATAGGAAAGGCATTGCA+TGG - Chr2:37982783-37982802 MsG0280008763.01.T01:intron 35.0%
!! TTTCTAGCTAATAAGGTACG+TGG - Chr2:37984520-37984539 MsG0280008763.01.T01:intron 35.0%
!! TTTTTGGTGGAAAAGAATGG+AGG + Chr2:37982509-37982528 None:intergenic 35.0%
!!! GGTTTAGTTTTCATTCCTGT+TGG - Chr2:37978824-37978843 MsG0280008763.01.T01:intron 35.0%
AAACATCAACTGCAGCCTAT+CGG + Chr2:37978527-37978546 None:intergenic 40.0%
ACACTCCCTGCCTAAAATAA+TGG - Chr2:37979527-37979546 MsG0280008763.01.T01:intron 40.0%
ACTATTACCAGAACCATCGA+CGG - Chr2:37981455-37981474 MsG0280008763.01.T01:intron 40.0%
AGAGAGGTTTGTAAATCGTG+TGG + Chr2:37979244-37979263 None:intergenic 40.0%
AGCAAGCAAGAGTAGAATGA+AGG + Chr2:37980369-37980388 None:intergenic 40.0%
AGCATTTACTTGGGTTCCTA+CGG - Chr2:37983365-37983384 MsG0280008763.01.T01:CDS 40.0%
AGTGCAGCATGATGAATTAG+TGG + Chr2:37983952-37983971 None:intergenic 40.0%
ATCTCAACCATGTTCTTTGC+AGG - Chr2:37978778-37978797 MsG0280008763.01.T01:CDS 40.0%
ATGCGGTTGTATCCTTCATA+GGG - Chr2:37980008-37980027 MsG0280008763.01.T01:intron 40.0%
ATTCAAAGGATTTCGATGGC+TGG - Chr2:37980075-37980094 MsG0280008763.01.T01:intron 40.0%
ATTCCAGAACATGTCCTTCA+AGG + Chr2:37978226-37978245 None:intergenic 40.0%
ATTGATCTCCATCATCTTCC+TGG - Chr2:37983848-37983867 MsG0280008763.01.T01:CDS 40.0%
CAAGCAAGAGTAGAATGAAG+GGG + Chr2:37980367-37980386 None:intergenic 40.0%
CAAGCTCAACAAATGATTGG+GGG + Chr2:37984422-37984441 None:intergenic 40.0%
CACCTATTTGACAGAGTTCT+TGG - Chr2:37983012-37983031 MsG0280008763.01.T01:CDS 40.0%
CAGAAATCAGAATGGTCAAC+AGG + Chr2:37983575-37983594 None:intergenic 40.0%
CATCTTCAGACGAAGACTTA+GGG + Chr2:37979706-37979725 None:intergenic 40.0%
CTGCTTACTACAGATCATAC+GGG + Chr2:37977996-37978015 None:intergenic 40.0%
GAAAACAATCTCATGGCACT+TGG + Chr2:37979925-37979944 None:intergenic 40.0%
GATACATACAAATTCCGTCG+TGG - Chr2:37982743-37982762 MsG0280008763.01.T01:intron 40.0%
GATCTTCCTATTGTACCTTG+TGG - Chr2:37982695-37982714 MsG0280008763.01.T01:intron 40.0%
GATGTCTGCCTTACATGAAT+TGG - Chr2:37978041-37978060 MsG0280008763.01.T01:intron 40.0%
GCAAGCAAGAGTAGAATGAA+GGG + Chr2:37980368-37980387 None:intergenic 40.0%
GCTCAAGCTCAACAAATGAT+TGG + Chr2:37984425-37984444 None:intergenic 40.0%
GGGGTAGGATGCAAAATATT+AGG - Chr2:37977870-37977889 MsG0280008763.01.T01:CDS 40.0%
GGTGGAAAAAATGACTTCCT+TGG - Chr2:37983792-37983811 MsG0280008763.01.T01:CDS 40.0%
GTAAGACAGAGTTATCCGAT+AGG - Chr2:37978509-37978528 MsG0280008763.01.T01:intron 40.0%
TATGAAGGATACAACCGCAT+GGG + Chr2:37980008-37980027 None:intergenic 40.0%
TCATCTTCAGACGAAGACTT+AGG + Chr2:37979707-37979726 None:intergenic 40.0%
TCGGTACTTACTGGAATACT+AGG + Chr2:37982896-37982915 None:intergenic 40.0%
TGTATCACTCATCAAACCAG+TGG + Chr2:37979612-37979631 None:intergenic 40.0%
TGTTGTAGAGGAAATTGGTG+CGG + Chr2:37979885-37979904 None:intergenic 40.0%
TTCAAAAGCTCGGTACTTAC+TGG + Chr2:37982905-37982924 None:intergenic 40.0%
TTTACCGTACAACTTTCGGA+AGG + Chr2:37983658-37983677 None:intergenic 40.0%
TTTCACTTGAACCATTCCCA+AGG - Chr2:37980398-37980417 MsG0280008763.01.T01:intron 40.0%
! ACACGTTACAACTTGTTCGT+AGG - Chr2:37981384-37981403 MsG0280008763.01.T01:intron 40.0%
! CATTTTGTTCTTAGCCGCTA+TGG + Chr2:37980961-37980980 None:intergenic 40.0%
! CGTTTTTGATGCAGACCTTA+TGG - Chr2:37984462-37984481 MsG0280008763.01.T01:intron 40.0%
! CTTGTACTGAATGCCATTTG+TGG - Chr2:37978619-37978638 MsG0280008763.01.T01:CDS 40.0%
! CTTTTACCCTTCAAGCGAAA+AGG - Chr2:37981117-37981136 MsG0280008763.01.T01:intron 40.0%
! GAAGACTCTAAAGGTCTACA+AGG + Chr2:37982671-37982690 None:intergenic 40.0%
! GGGAAATTCATTTTCCTCCA+TGG - Chr2:37980171-37980190 MsG0280008763.01.T01:intron 40.0%
! TACCTTGTGGATTGATAGCA+TGG - Chr2:37982708-37982727 MsG0280008763.01.T01:intron 40.0%
!! CTGATCTTTTTAGCGCTTCT+TGG - Chr2:37981353-37981372 MsG0280008763.01.T01:intron 40.0%
!! GACTTTTCATATGAAGCACC+AGG + Chr2:37983869-37983888 None:intergenic 40.0%
!! TGTCAAGTTGAGAGAAGGAA+CGG + Chr2:37978425-37978444 None:intergenic 40.0%
!! TTTGTGGTTTGGTGGCAAAA+CGG + Chr2:37979582-37979601 None:intergenic 40.0%
AAACAGCGATCTCGTTCTCA+TGG - Chr2:37979332-37979351 MsG0280008763.01.T01:intron 45.0%
AACGGCTCTCAAATTCCTTG+TGG + Chr2:37980753-37980772 None:intergenic 45.0%
AACTAACTGCTGCAGGTGTA+AGG + Chr2:37978702-37978721 None:intergenic 45.0%
AAGTGCTCTTAGGCTGTACT+TGG - Chr2:37982321-37982340 MsG0280008763.01.T01:intron 45.0%
ACGGCTCTCAAATTCCTTGT+GGG + Chr2:37980752-37980771 None:intergenic 45.0%
AGGCAAGTATAGATGACGAG+AGG + Chr2:37980321-37980340 None:intergenic 45.0%
AGTGACCGCGATCACAAATT+TGG - Chr2:37982809-37982828 MsG0280008763.01.T01:intron 45.0%
AGTTCATCAACCATCAGCAC+AGG - Chr2:37977765-37977784 MsG0280008763.01.T01:CDS 45.0%
ATCTATACTTGCCTCGCACT+TGG - Chr2:37980327-37980346 MsG0280008763.01.T01:intron 45.0%
ATTGTAGAGAGACACCCACA+AGG - Chr2:37980735-37980754 MsG0280008763.01.T01:intron 45.0%
CAAAATGGTACCTTGACTGG+AGG - Chr2:37982857-37982876 MsG0280008763.01.T01:intron 45.0%
CAAGTATAGATGACGAGAGG+TGG + Chr2:37980318-37980337 None:intergenic 45.0%
CATGCGGTTGTATCCTTCAT+AGG - Chr2:37980007-37980026 MsG0280008763.01.T01:intron 45.0%
CGAAGTGTAACAAGTCCAAC+AGG + Chr2:37978842-37978861 None:intergenic 45.0%
CTATCAACATCTAGCTGGCT+GGG - Chr2:37983771-37983790 MsG0280008763.01.T01:CDS 45.0%
CTATGAAGGATACAACCGCA+TGG + Chr2:37980009-37980028 None:intergenic 45.0%
CTCCATGCTATCAATCCACA+AGG + Chr2:37982713-37982732 None:intergenic 45.0%
CTGCATCAAAAACGAAGCAC+AGG + Chr2:37984456-37984475 None:intergenic 45.0%
GAGGTTACAGGTGATAAAGG+TGG + Chr2:37980197-37980216 None:intergenic 45.0%
GAGGTTTGTAAATCGTGTGG+TGG + Chr2:37979241-37979260 None:intergenic 45.0%
GCAATGACCTGCAAAGAACA+TGG + Chr2:37978788-37978807 None:intergenic 45.0%
GGAAAAGAACTAACTGCTGC+AGG + Chr2:37978709-37978728 None:intergenic 45.0%
GTAAGGACAGGTTTACATGC+TGG + Chr2:37978685-37978704 None:intergenic 45.0%
TCAACGATTTCTGTTGGGGT+AGG - Chr2:37977855-37977874 MsG0280008763.01.T01:CDS 45.0%
TCAATTCTGATGGTCCACGA+CGG + Chr2:37982760-37982779 None:intergenic 45.0%
TCGTGGACCATCAGAATTGA+AGG - Chr2:37982760-37982779 MsG0280008763.01.T01:intron 45.0%
TCTATCAACATCTAGCTGGC+TGG - Chr2:37983770-37983789 MsG0280008763.01.T01:CDS 45.0%
TCTCTCTCATGAGACCATAG+CGG - Chr2:37980944-37980963 MsG0280008763.01.T01:intron 45.0%
TCTTGTGGTCTAACCATGTG+AGG - Chr2:37979487-37979506 MsG0280008763.01.T01:intron 45.0%
TGAGGAAACTGCCACAAAGA+AGG + Chr2:37980537-37980556 None:intergenic 45.0%
TGCTGCAATACCACCACAAA+TGG + Chr2:37978635-37978654 None:intergenic 45.0%
TGGTCTAACCATGTGAGGTA+GGG - Chr2:37979492-37979511 MsG0280008763.01.T01:intron 45.0%
! AGAAGTGTGTGGGAGATGAA+CGG + Chr2:37980771-37980790 None:intergenic 45.0%
! ATGAAGCACCAGGAAGATGA+TGG + Chr2:37983859-37983878 None:intergenic 45.0%
! ATGCGACCTTTTCGCTTGAA+GGG + Chr2:37981126-37981145 None:intergenic 45.0%
! CTCTAAAGGTCTACAAGGAC+TGG + Chr2:37982666-37982685 None:intergenic 45.0%
! GTACTGAATGCCATTTGTGG+TGG - Chr2:37978622-37978641 MsG0280008763.01.T01:CDS 45.0%
! GTGGGTCTTATAATATGGGG+TGG + Chr2:37980805-37980824 None:intergenic 45.0%
! TAGCCTTGAAGGACATGTTC+TGG - Chr2:37978220-37978239 MsG0280008763.01.T01:intron 45.0%
! TATGCGACCTTTTCGCTTGA+AGG + Chr2:37981127-37981146 None:intergenic 45.0%
!! AAGTACAGCCTAAGAGCACT+TGG + Chr2:37982322-37982341 None:intergenic 45.0%
!! ATGGATTAAACGGGTTGGCA+TGG - Chr2:37979546-37979565 MsG0280008763.01.T01:CDS 45.0%
!! CATATTTTGGGAGGAGCCTT+GGG + Chr2:37980417-37980436 None:intergenic 45.0%
!! TCATATTTTGGGAGGAGCCT+TGG + Chr2:37980418-37980437 None:intergenic 45.0%
!! TTGTGGTTTGGTGGCAAAAC+GGG + Chr2:37979581-37979600 None:intergenic 45.0%
!!! ATTTTAGGCAGGGAGTGTTG+AGG + Chr2:37979525-37979544 None:intergenic 45.0%
!!! CAAGTGCGTCTTTTAGAGCA+AGG + Chr2:37978754-37978773 None:intergenic 45.0%
!!! GGTTTTAGGTCACATGCACA+GGG - Chr2:37981937-37981956 MsG0280008763.01.T01:intron 45.0%
!!! TGGTTTTAGGTCACATGCAC+AGG - Chr2:37981936-37981955 MsG0280008763.01.T01:intron 45.0%
!! AAAAAAATAATAGAAAAAAA+AGG + Chr2:37984020-37984039 None:intergenic 5.0%
ACAGGTGATAAAGGTGGCCA+TGG + Chr2:37980191-37980210 None:intergenic 50.0%
ACCGTACAACTTTCGGAAGG+TGG + Chr2:37983655-37983674 None:intergenic 50.0%
ACTCATCAAACCAGTGGCAG+TGG + Chr2:37979606-37979625 None:intergenic 50.0%
AGTGATCAGCAGCTCGTACA+TGG - Chr2:37982623-37982642 MsG0280008763.01.T01:intron 50.0%
ATCCTTACCGTCGATGGTTC+TGG + Chr2:37981465-37981484 None:intergenic 50.0%
ATGCAGACCTTATGGGGACA+CGG - Chr2:37984470-37984489 MsG0280008763.01.T01:intron 50.0%
ATGCTTTCCAGTGGCTGAAG+AGG + Chr2:37980261-37980280 None:intergenic 50.0%
CCCACCTTCCGAAAGTTGTA+CGG - Chr2:37983651-37983670 MsG0280008763.01.T01:intron 50.0%
CCGTACAACTTTCGGAAGGT+GGG + Chr2:37983654-37983673 None:intergenic 50.0%
CCTAGGGCCACATTGTTCTA+AGG + Chr2:37980706-37980725 None:intergenic 50.0%
CCTTAGAACAATGTGGCCCT+AGG - Chr2:37980703-37980722 MsG0280008763.01.T01:intron 50.0%
CTCATCAAACCAGTGGCAGT+GGG + Chr2:37979605-37979624 None:intergenic 50.0%
GCAAGAGTAGAATGAAGGGG+TGG + Chr2:37980364-37980383 None:intergenic 50.0%
GCTCTACACAGACCCTATGA+AGG + Chr2:37980023-37980042 None:intergenic 50.0%
GGACAGGTTTACATGCTGGA+AGG + Chr2:37978681-37978700 None:intergenic 50.0%
GTATAGATGACGAGAGGTGG+AGG + Chr2:37980315-37980334 None:intergenic 50.0%
GTGGTCTAACCATGTGAGGT+AGG - Chr2:37979491-37979510 MsG0280008763.01.T01:intron 50.0%
GTTCACGGTTAGCACAAGAC+TGG + Chr2:37980601-37980620 None:intergenic 50.0%
TACCAGAACCATCGACGGTA+AGG - Chr2:37981460-37981479 MsG0280008763.01.T01:intron 50.0%
TGATTTCAGAGCTCTCGTCC+AGG + Chr2:37980626-37980645 None:intergenic 50.0%
TGCTTTCCAGTGGCTGAAGA+GGG + Chr2:37980260-37980279 None:intergenic 50.0%
TGTGCTAACCGTGAACTACC+TGG - Chr2:37980605-37980624 MsG0280008763.01.T01:intron 50.0%
TTGGCATAGCCACAGTAGAG+AGG + Chr2:37979260-37979279 None:intergenic 50.0%
TTGGGGAAGATGCTTTCCAG+TGG + Chr2:37980270-37980289 None:intergenic 50.0%
!! ATCGGCGCTCTCATTGACTT+AGG + Chr2:37981412-37981431 None:intergenic 50.0%
!! ATTAAACGGGTTGGCATGGC+AGG - Chr2:37979550-37979569 MsG0280008763.01.T01:CDS 50.0%
!! GTTTTGGACCCTACCTCACA+TGG + Chr2:37979503-37979522 None:intergenic 50.0%
AACCACAAACCCACTGCCAC+TGG - Chr2:37979593-37979612 MsG0280008763.01.T01:CDS 55.0%
AACTCACCTCCATGTCGTGC+AGG + Chr2:37977813-37977832 None:intergenic 55.0%
ACCAAACCTAACCCCCCTTG+AGG - Chr2:37979976-37979995 MsG0280008763.01.T01:intron 55.0%
ACTCACCTCCATGTCGTGCA+GGG + Chr2:37977812-37977831 None:intergenic 55.0%
ACTGCTGCAGGTGTAAGGAC+AGG + Chr2:37978697-37978716 None:intergenic 55.0%
AGAATGAAGGGGTGGCTACG+TGG + Chr2:37980356-37980375 None:intergenic 55.0%
ATGGGTCTGTTCCTCAAGGG+GGG + Chr2:37979990-37980009 None:intergenic 55.0%
CAACCATCAGCACAGGTGCA+CGG - Chr2:37977772-37977791 MsG0280008763.01.T01:CDS 55.0%
CAGCAGCTCGTACATGGACT+TGG - Chr2:37982629-37982648 MsG0280008763.01.T01:intron 55.0%
CAGCTTTGCACCTCCAGTCA+AGG + Chr2:37982870-37982889 None:intergenic 55.0%
CATGGGTCTGTTCCTCAAGG+GGG + Chr2:37979991-37980010 None:intergenic 55.0%
CCTTGAGGAACAGACCCATG+CGG - Chr2:37979991-37980010 MsG0280008763.01.T01:intron 55.0%
CGCATGGGTCTGTTCCTCAA+GGG + Chr2:37979993-37980012 None:intergenic 55.0%
GAATGAAGGGGTGGCTACGT+GGG + Chr2:37980355-37980374 None:intergenic 55.0%
GAGTAGACCGTGTCCCCATA+AGG + Chr2:37984480-37984499 None:intergenic 55.0%
GCATGGGTCTGTTCCTCAAG+GGG + Chr2:37979992-37980011 None:intergenic 55.0%
GCTCTCGTCCAGGTAGTTCA+CGG + Chr2:37980616-37980635 None:intergenic 55.0%
GGGACACGGTCTACTCAACA+TGG - Chr2:37984484-37984503 MsG0280008763.01.T01:intron 55.0%
GGTGATAAAGGTGGCCATGG+AGG + Chr2:37980188-37980207 None:intergenic 55.0%
TCAACATCTAGCTGGCTGGG+TGG - Chr2:37983774-37983793 MsG0280008763.01.T01:CDS 55.0%
TCCTCAAGGGGGGTTAGGTT+TGG + Chr2:37979980-37979999 None:intergenic 55.0%
TCTGTTCCTCAAGGGGGGTT+AGG + Chr2:37979985-37980004 None:intergenic 55.0%
TTTGGGAGGAGCCTTGGGAA+TGG + Chr2:37980412-37980431 None:intergenic 55.0%
! AACCAGTGGCAGTGGGTTTG+TGG + Chr2:37979598-37979617 None:intergenic 55.0%
! GCAGTGGGTTTGTGGTTTGG+TGG + Chr2:37979590-37979609 None:intergenic 55.0%
! GTGGCAGTGGGTTTGTGGTT+TGG + Chr2:37979593-37979612 None:intergenic 55.0%
!!! GGCAGGGAGTGTTGAGGTTT+TGG + Chr2:37979519-37979538 None:intergenic 55.0%
ACAGGTGCACGGACAACTCC+AGG - Chr2:37977783-37977802 MsG0280008763.01.T01:CDS 60.0%
CCGCATGGGTCTGTTCCTCA+AGG + Chr2:37979994-37980013 None:intergenic 60.0%
CTACGTGGGTTCCAAGTGCG+AGG + Chr2:37980341-37980360 None:intergenic 60.0%
GCTCTACCCTCTTCAGCCAC+TGG - Chr2:37980251-37980270 MsG0280008763.01.T01:intron 60.0%
TGTCCGTGCACCTGTGCTGA+TGG + Chr2:37977778-37977797 None:intergenic 60.0%
CCAGGACGCCCTGCACGACA+TGG - Chr2:37977801-37977820 MsG0280008763.01.T01:CDS 70.0%
GGACGCCCTGCACGACATGG+AGG - Chr2:37977804-37977823 MsG0280008763.01.T01:CDS 70.0%
! CCATGTCGTGCAGGGCGTCC+TGG + Chr2:37977804-37977823 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 37977747 37984690 37977747 ID=MsG0280008763.01;Name=MsG0280008763.01
Chr2 mRNA 37977747 37984690 37977747 ID=MsG0280008763.01.T01;Parent=MsG0280008763.01;Name=MsG0280008763.01.T01;_AED=0.41;_eAED=0.59;_QI=0|0.42|0.5|1|0.57|0.62|8|0|496
Chr2 exon 37984587 37984690 37984587 ID=MsG0280008763.01.T01:exon:33200;Parent=MsG0280008763.01.T01
Chr2 exon 37983723 37983972 37983723 ID=MsG0280008763.01.T01:exon:33199;Parent=MsG0280008763.01.T01
Chr2 exon 37983563 37983637 37983563 ID=MsG0280008763.01.T01:exon:33198;Parent=MsG0280008763.01.T01
Chr2 exon 37983349 37983465 37983349 ID=MsG0280008763.01.T01:exon:33197;Parent=MsG0280008763.01.T01
Chr2 exon 37982996 37983099 37982996 ID=MsG0280008763.01.T01:exon:33196;Parent=MsG0280008763.01.T01
Chr2 exon 37979533 37979830 37979533 ID=MsG0280008763.01.T01:exon:33195;Parent=MsG0280008763.01.T01
Chr2 exon 37978545 37978834 37978545 ID=MsG0280008763.01.T01:exon:33194;Parent=MsG0280008763.01.T01
Chr2 exon 37977747 37977999 37977747 ID=MsG0280008763.01.T01:exon:33193;Parent=MsG0280008763.01.T01
Chr2 CDS 37984587 37984690 37984587 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37983723 37983972 37983723 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37983563 37983637 37983563 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37983349 37983465 37983349 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37982996 37983099 37982996 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37979533 37979830 37979533 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37978545 37978834 37978545 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Chr2 CDS 37977747 37977999 37977747 ID=MsG0280008763.01.T01:cds;Parent=MsG0280008763.01.T01
Gene Sequence

>MsG0280008763.01.T01

ATGGATGTCGATGGTGGGAGTTCATCAACCATCAGCACAGGTGCACGGACAACTCCAGGACGCCCTGCACGACATGGAGGTGAGTTTACTTTCTTTTTAGGCAGGAATAAAACTTGTTATCATATTTGGCCTTTACATAGACTAAAAAGTAAGACAGAGTTATCCGATAGGCTGCAGTTGATGTTTCTTCCTTACACGAGCCTTTTTGTTTTGAAACTACTTTATGTTGTCTTTTGCCTTGCTCTTTTCTTAATGGAACTTGTACTGAATGCCATTTGTGGTGGTATTGCAGCACTCTATCAGTTTACACAGCAGAGCCTTCCAGCATGTAAACCTGTCCTTACACCTGCAGCAGTCATTGCTACATTTCTATTGATGGGTTTAGTTTTCATTCCTGTTGGACTTGTTACACTTCGTGCGTCATATAGTGTTGTTGAAATTGTGGACAGATATGATATTGACTGTGTACCTGAAGAATATAGAAGTAACAAAGTAGCATATGTAAAAGATGACTCGATCTCCAAAAATTGTTCGCGATTCTTAAAGCGATCTCGTTCTCATGGCTCTTATGAAACTACCTCTAAATTTTATTTTCTTCTCAAATTGACAATAGATTGTGTTGGAAAGGAATACAAACACATGTGTGACAGGTATGTAAAAAGTAGGAGTGATCAGCAGCTCGTACATGGACTTGGATACAATGATACCAGTCCTTGTAGACCTTTAGAGTCTTCTAATGATCTTCCTATTGTACCTTGTGGATTGATAGCATGGAGTTTATTCAATGATACATACAAATTCCGTCGTGGACCATCAGAATTGAAGGTTAATAGGAAAGGCATTGCATGGAAGAGTGACCGCGATCACAAATTTGGAAAACAGGTTTACCCATTTAATTTTCAAAATGGTACCTTGACTGGAGGTGCAAAGCTGAATCCTAGTATTCCACTTAGTGATCAAGAAGATCTCATAGTTTGGATGCGGACTGCTGCTCTTCCCACCTTCCGAAAGTTGTACGGTAAAATAGAAGAGGATTTGGATGCAGATGATGTTATAGTAGTCAATCTAAAGAATAACTATAACACTTACAGTTTTGGAGGAAAGAAGAAGCTTGTTCTATCAACATCTAGCTGGCTGGGTGGAAAAAATGACTTCCTTGGAATTGCTAATTTATTTGTCGGAACCTTTAGTATATTGATCTCCATCATCTTCCTGGTGCTTCATATGAAAAGTCCTAGCTTGAGCTCTATTTACCTGTGCTTCGTTTTTGATGCAGACCTTATGGGGACACGGTCTACTCAACATGGAATAAGAAAAGCATTTCTAGCTAATAAGGTACGTGGTACACCTGTAATTCTTTCAAAGCGAAAACTCAAGATGCATATTCTTGTAACAAAAGATGTTGTATTTGATAGTCGGTACATGGTACAGCAGAGTTTTCTCATAGTGAAACTGCGATACATGTTCTCGTTTGAAAACTATTGTATTTAA

Protein sequence

>MsG0280008763.01.T01

MDVDGGSSSTISTGARTTPGRPARHGGEFTFFLGRNKTCYHIWPLHRLKSKTELSDRLQLMFLPYTSLFVLKLLYVVFCLALFLMELVLNAICGGIAALYQFTQQSLPACKPVLTPAAVIATFLLMGLVFIPVGLVTLRASYSVVEIVDRYDIDCVPEEYRSNKVAYVKDDSISKNCSRFLKRSRSHGSYETTSKFYFLLKLTIDCVGKEYKHMCDRYVKSRSDQQLVHGLGYNDTSPCRPLESSNDLPIVPCGLIAWSLFNDTYKFRRGPSELKVNRKGIAWKSDRDHKFGKQVYPFNFQNGTLTGGAKLNPSIPLSDQEDLIVWMRTAALPTFRKLYGKIEEDLDADDVIVVNLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFLGIANLFVGTFSILISIIFLVLHMKSPSLSSIYLCFVFDADLMGTRSTQHGIRKAFLANKVRGTPVILSKRKLKMHILVTKDVVFDSRYMVQQSFLIVKLRYMFSFENYCI*