AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041999.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041999.01.T01 MTR_8g009090 94.780 364 11 1 1 356 1 364 0.0 718
MsG0880041999.01.T01 MTR_8g008930 87.671 365 36 2 1 356 1 365 0.0 665
MsG0880041999.01.T01 MTR_8g009160 83.791 364 51 1 1 356 1 364 0.0 642
MsG0880041999.01.T01 MTR_8g009110 83.836 365 50 2 1 356 1 365 0.0 634
MsG0880041999.01.T01 MTR_8g028435 83.242 364 53 1 1 356 1 364 0.0 631
MsG0880041999.01.T01 MTR_8g009170 83.060 366 52 3 1 356 1 366 0.0 623
MsG0880041999.01.T01 MTR_4g117880 73.497 366 87 3 1 356 1 366 0.0 557
MsG0880041999.01.T01 MTR_8g009150 72.603 365 71 3 1 356 1 345 0.0 539
MsG0880041999.01.T01 MTR_8g009120 72.877 365 78 3 1 356 1 353 0.0 531
MsG0880041999.01.T01 MTR_2g069210 66.940 366 108 4 2 356 4 367 0.0 505
MsG0880041999.01.T01 MTR_8g009170 83.392 283 46 1 1 282 1 283 1.13e-176 492
MsG0880041999.01.T01 MTR_2g069190 67.989 353 101 3 15 356 20 371 1.99e-176 494
MsG0880041999.01.T01 MTR_2g069090 68.644 354 98 4 15 356 20 372 6.12e-175 491
MsG0880041999.01.T01 MTR_8g009080 64.641 362 115 5 6 356 38 397 1.02e-167 474
MsG0880041999.01.T01 MTR_2g069300 63.920 352 114 4 17 356 8 358 1.69e-166 469
MsG0880041999.01.T01 MTR_1g043770 58.989 356 131 5 14 356 2 355 3.80e-149 425
MsG0880041999.01.T01 MTR_1g043775 57.550 351 136 5 17 356 9 357 1.43e-143 410
MsG0880041999.01.T01 MTR_1g043810 56.125 351 141 5 17 356 9 357 5.56e-143 409
MsG0880041999.01.T01 MTR_1g043760 57.880 349 135 4 17 355 9 355 5.74e-142 407
MsG0880041999.01.T01 MTR_8g041620 54.366 355 145 5 17 356 22 374 6.61e-138 397
MsG0880041999.01.T01 MTR_8g041600 54.366 355 145 5 17 356 22 374 3.22e-137 395
MsG0880041999.01.T01 MTR_0032s0040 51.724 377 157 5 1 356 1 373 9.49e-134 386
MsG0880041999.01.T01 MTR_7g056347 49.596 371 166 6 4 356 6 373 1.45e-133 386
MsG0880041999.01.T01 MTR_1g093120 49.459 370 171 5 1 356 3 370 1.58e-132 383
MsG0880041999.01.T01 MTR_2g069060 54.441 349 131 5 16 356 21 349 2.22e-132 382
MsG0880041999.01.T01 MTR_8g006930 51.613 372 159 6 3 356 5 373 6.29e-129 374
MsG0880041999.01.T01 MTR_2g069010 52.381 357 152 6 16 356 21 375 1.09e-128 374
MsG0880041999.01.T01 MTR_7g029655 51.111 360 154 5 15 356 15 370 1.77e-128 373
MsG0880041999.01.T01 MTR_4g119410 52.419 372 156 6 3 356 5 373 4.99e-128 372
MsG0880041999.01.T01 MTR_1g093140 48.276 377 173 5 1 356 3 378 1.81e-127 370
MsG0880041999.01.T01 MTR_1g093110 49.167 360 161 6 16 356 18 374 6.53e-126 366
MsG0880041999.01.T01 MTR_2g068950 50.000 372 167 7 1 356 1 369 8.25e-125 363
MsG0880041999.01.T01 MTR_8g009180 73.279 247 42 3 134 356 48 294 1.26e-124 360
MsG0880041999.01.T01 MTR_8g063070 47.312 372 179 6 1 356 3 373 3.60e-124 362
MsG0880041999.01.T01 MTR_8g009080 62.143 280 101 3 6 282 38 315 1.85e-122 356
MsG0880041999.01.T01 MTR_8g062600 46.667 375 173 6 3 356 5 373 6.59e-122 356
MsG0880041999.01.T01 MTR_7g078010 50.135 371 164 6 4 356 6 373 9.04e-122 356
MsG0880041999.01.T01 MTR_8g009080 63.406 276 96 4 6 278 38 311 1.66e-121 354
MsG0880041999.01.T01 MTR_2g068960 49.462 372 169 7 1 356 1 369 2.62e-121 355
MsG0880041999.01.T01 MTR_2g069020 50.708 353 153 7 16 352 19 366 9.19e-121 353
MsG0880041999.01.T01 MTR_4g024660 46.486 370 181 6 3 356 5 373 2.08e-120 352
MsG0880041999.01.T01 MTR_2g069020 50.708 353 153 7 16 352 19 366 4.68e-120 352
MsG0880041999.01.T01 MTR_7g056393 49.462 372 167 6 3 356 5 373 7.21e-120 351
MsG0880041999.01.T01 MTR_8g469400 45.946 370 170 8 3 356 5 360 1.49e-111 329
MsG0880041999.01.T01 MTR_1g043770 58.394 274 107 4 14 282 2 273 2.06e-108 319
MsG0880041999.01.T01 MTR_1g043775 57.993 269 108 4 17 282 9 275 2.75e-107 317
MsG0880041999.01.T01 MTR_1g070185 45.584 351 174 4 17 356 23 367 2.27e-106 317
MsG0880041999.01.T01 MTR_1g043810 56.134 269 113 4 17 282 9 275 1.96e-105 313
MsG0880041999.01.T01 MTR_8g041600 52.768 271 120 3 17 281 22 290 2.36e-101 301
MsG0880041999.01.T01 MTR_7g056353 44.602 352 155 6 16 355 23 346 3.75e-96 295
MsG0880041999.01.T01 MTR_2g069060 58.150 227 94 1 55 281 22 247 9.93e-96 285
MsG0880041999.01.T01 MTR_7g078010 50.877 285 130 4 4 281 6 287 5.31e-94 283
MsG0880041999.01.T01 MTR_7g105070 38.000 350 203 4 19 356 15 362 5.78e-85 261
MsG0880041999.01.T01 MTR_1g032220 40.857 350 188 5 19 355 28 371 5.86e-83 257
MsG0880041999.01.T01 MTR_1g032140 41.209 364 195 5 5 355 7 364 1.35e-81 253
MsG0880041999.01.T01 MTR_1g032250 40.351 342 185 5 19 347 28 363 8.35e-79 246
MsG0880041999.01.T01 MTR_1g043840 52.874 174 70 2 175 336 50 223 3.61e-58 192
MsG0880041999.01.T01 MTR_1g043840 56.757 74 31 1 71 144 256 328 6.02e-22 95.5
MsG0880041999.01.T01 MTR_7g068650 31.564 358 214 10 19 351 6 357 8.40e-56 186
MsG0880041999.01.T01 MTR_5g032870 36.792 318 177 9 44 344 24 334 8.16e-54 181
MsG0880041999.01.T01 MTR_1g044105 52.727 165 68 4 17 173 9 171 8.57e-52 170
MsG0880041999.01.T01 MTR_2g068840 33.523 352 201 9 27 356 21 361 3.73e-51 174
MsG0880041999.01.T01 MTR_4g015790 30.748 361 204 10 28 351 14 365 7.85e-51 174
MsG0880041999.01.T01 MTR_3g092890 33.766 308 183 6 60 355 38 336 1.84e-50 172
MsG0880041999.01.T01 MTR_7g056370 42.857 189 101 3 18 202 2 187 8.21e-50 166
MsG0880041999.01.T01 MTR_5g032880 35.016 317 175 7 44 344 24 325 2.83e-49 176
MsG0880041999.01.T01 MTR_5g032880 35.220 318 182 9 44 344 362 672 5.65e-47 169
MsG0880041999.01.T01 MTR_5g065010 30.523 344 221 7 27 356 3 342 4.98e-49 168
MsG0880041999.01.T01 MTR_6g015950 35.526 304 170 8 56 344 35 327 5.42e-49 168
MsG0880041999.01.T01 MTR_3g091350 32.551 341 189 10 13 330 18 340 7.82e-49 168
MsG0880041999.01.T01 MTR_8g024120 30.435 322 206 5 46 356 29 343 2.90e-47 164
MsG0880041999.01.T01 MTR_1g062110 30.812 357 211 10 27 356 26 373 8.38e-47 163
MsG0880041999.01.T01 MTR_7g016080 33.445 299 176 7 55 344 36 320 1.46e-46 161
MsG0880041999.01.T01 MTR_0009s0050 30.460 348 213 10 27 356 12 348 1.98e-46 162
MsG0880041999.01.T01 MTR_0009s0050 30.460 348 213 10 27 356 12 348 2.06e-46 162
MsG0880041999.01.T01 MTR_5g055820 30.000 350 213 12 27 356 12 349 2.96e-46 161
MsG0880041999.01.T01 MTR_2g072910 29.023 348 220 10 27 356 16 354 4.89e-46 160
MsG0880041999.01.T01 MTR_7g102820 30.868 311 178 8 60 343 67 367 5.64e-46 161
MsG0880041999.01.T01 MTR_5g048570 29.598 348 214 10 27 356 12 346 8.79e-46 160
MsG0880041999.01.T01 MTR_3g063180 31.471 340 207 10 28 347 10 343 9.91e-46 160
MsG0880041999.01.T01 MTR_2g072890 27.059 340 225 9 33 356 23 355 2.69e-45 159
MsG0880041999.01.T01 MTR_5g055680 32.727 330 192 10 46 356 30 348 2.90e-45 159
MsG0880041999.01.T01 MTR_5g048850 30.857 350 209 13 27 356 12 348 3.06e-45 159
MsG0880041999.01.T01 MTR_1g070135 31.481 324 197 9 46 355 26 338 6.09e-45 157
MsG0880041999.01.T01 MTR_5g082750 31.646 316 195 7 56 355 45 355 1.21e-44 157
MsG0880041999.01.T01 MTR_3g070860 29.213 356 228 8 19 355 6 356 1.53e-44 157
MsG0880041999.01.T01 MTR_1g070085 29.825 342 208 9 34 355 9 338 2.30e-44 156
MsG0880041999.01.T01 MTR_1g070085 29.825 342 208 9 34 355 9 338 2.30e-44 156
MsG0880041999.01.T01 MTR_1g034140 31.915 329 179 10 60 356 27 342 2.70e-44 155
MsG0880041999.01.T01 MTR_5g055690 28.736 348 220 8 27 356 12 349 3.19e-44 156
MsG0880041999.01.T01 MTR_1g070120 33.127 323 191 9 46 354 26 337 3.42e-44 155
MsG0880041999.01.T01 MTR_3g045230 32.277 347 209 8 27 356 17 354 5.99e-44 155
MsG0880041999.01.T01 MTR_8g075890 33.935 277 164 7 41 301 19 292 7.99e-44 155
MsG0880041999.01.T01 MTR_5g055900 31.322 348 210 10 27 356 12 348 9.91e-44 154
MsG0880041999.01.T01 MTR_5g048550 29.446 343 213 10 27 351 12 343 5.42e-43 152
MsG0880041999.01.T01 MTR_4g099380 45.181 166 75 3 16 174 126 282 7.56e-43 150
MsG0880041999.01.T01 MTR_1g034120 32.372 312 171 9 60 338 26 330 8.85e-43 152
MsG0880041999.01.T01 MTR_1g034060 32.051 312 172 9 60 338 26 330 1.14e-42 152
MsG0880041999.01.T01 MTR_3g091360 31.447 318 200 8 22 325 11 324 1.43e-42 151
MsG0880041999.01.T01 MTR_4g093840 31.481 324 203 8 48 356 47 366 1.95e-42 151
MsG0880041999.01.T01 MTR_4g087110 29.799 349 209 9 40 356 6 350 2.80e-42 150
MsG0880041999.01.T01 MTR_0009s0480 31.322 348 210 12 27 356 11 347 5.05e-42 150
MsG0880041999.01.T01 MTR_7g016090 32.899 307 175 8 55 344 34 326 6.86e-42 149
MsG0880041999.01.T01 MTR_7g016090 32.899 307 175 8 55 344 36 328 7.57e-42 149
MsG0880041999.01.T01 MTR_8g064200 28.531 354 227 9 11 347 1 345 8.55e-42 149
MsG0880041999.01.T01 MTR_8g064200 28.451 355 228 9 10 347 5 350 8.76e-42 149
MsG0880041999.01.T01 MTR_0328s0030 28.531 354 212 8 27 356 10 346 9.44e-42 149
MsG0880041999.01.T01 MTR_7g102720 31.562 320 191 7 52 356 29 335 1.09e-41 149
MsG0880041999.01.T01 MTR_4g087090 29.470 302 182 6 60 336 30 325 2.20e-41 148
MsG0880041999.01.T01 MTR_1g033810 30.479 292 180 8 60 336 47 330 1.58e-40 146
MsG0880041999.01.T01 MTR_3g043900 31.034 348 211 10 27 356 17 353 2.00e-40 145
MsG0880041999.01.T01 MTR_8g075830 32.130 277 169 7 41 301 19 292 2.53e-40 145
MsG0880041999.01.T01 MTR_2g068800 31.930 285 149 7 27 291 21 280 9.18e-40 142
MsG0880041999.01.T01 MTR_1g070080 32.000 300 180 9 60 344 38 328 9.69e-40 144
MsG0880041999.01.T01 MTR_5g055800 29.310 348 216 12 27 356 12 347 1.05e-39 144
MsG0880041999.01.T01 MTR_5g048740 28.652 356 210 12 27 356 10 347 1.58e-39 143
MsG0880041999.01.T01 MTR_4g087100 31.683 303 165 11 60 329 26 319 4.56e-39 142
MsG0880041999.01.T01 MTR_5g022020 32.246 276 168 7 42 301 20 292 6.99e-39 142
MsG0880041999.01.T01 MTR_5g048470 27.381 336 223 7 27 347 17 346 1.21e-38 141
MsG0880041999.01.T01 MTR_4g087120 27.273 352 214 10 40 356 6 350 1.39e-38 141
MsG0880041999.01.T01 MTR_7g062570 27.907 344 214 11 27 349 19 349 2.62e-38 140
MsG0880041999.01.T01 MTR_3g058610 32.734 278 166 9 41 301 19 292 3.43e-38 140
MsG0880041999.01.T01 MTR_4g087140 31.532 333 185 12 60 356 26 351 3.54e-38 140
MsG0880041999.01.T01 MTR_7g062580 28.701 331 202 13 27 336 19 336 5.29e-38 139
MsG0880041999.01.T01 MTR_2g083030 29.801 302 165 9 57 336 34 310 3.23e-37 137
MsG0880041999.01.T01 MTR_2g437380 28.797 316 197 9 60 356 50 356 3.52e-37 137
MsG0880041999.01.T01 MTR_1g062110 31.449 283 169 8 27 290 26 302 6.28e-37 135
MsG0880041999.01.T01 MTR_1g102070 32.647 340 191 10 22 332 16 346 2.53e-36 135
MsG0880041999.01.T01 MTR_5g059130 30.169 295 176 8 60 336 44 326 2.86e-36 134
MsG0880041999.01.T01 MTR_2g069070 42.767 159 74 2 16 174 21 162 3.32e-36 130
MsG0880041999.01.T01 MTR_1g081840 30.503 318 186 9 47 339 40 347 3.57e-36 135
MsG0880041999.01.T01 MTR_7g063730 28.107 338 213 11 38 356 39 365 4.04e-36 135
MsG0880041999.01.T01 MTR_5g011250 30.872 298 176 9 60 335 47 336 5.33e-36 134
MsG0880041999.01.T01 MTR_3g026150 31.475 305 179 12 57 343 57 349 1.37e-35 133
MsG0880041999.01.T01 MTR_3g088565 30.249 281 170 10 59 324 2 271 2.63e-35 131
MsG0880041999.01.T01 MTR_3g083370 32.542 295 151 12 60 328 4 276 3.28e-35 131
MsG0880041999.01.T01 MTR_3g117420 29.861 288 174 8 60 329 52 329 3.50e-35 132
MsG0880041999.01.T01 MTR_6g464620 31.270 307 185 6 47 332 50 351 6.66e-35 132
MsG0880041999.01.T01 MTR_7g081710 27.607 326 215 7 30 340 16 335 7.94e-35 130
MsG0880041999.01.T01 MTR_1g048940 29.651 344 193 16 39 356 30 350 9.68e-35 130
MsG0880041999.01.T01 MTR_1g070135 32.906 234 145 6 46 274 26 252 2.41e-34 128
MsG0880041999.01.T01 MTR_7g451860 31.225 253 162 4 60 302 41 291 3.44e-34 129
MsG0880041999.01.T01 MTR_7g047670 31.225 253 162 4 60 302 41 291 3.44e-34 129
MsG0880041999.01.T01 MTR_5g085330 31.488 289 158 11 61 328 6 275 4.09e-34 128
MsG0880041999.01.T01 MTR_2g025120 30.986 284 156 10 61 323 5 269 4.49e-34 128
MsG0880041999.01.T01 MTR_7g062560 27.707 314 195 9 56 356 59 353 8.53e-34 128
MsG0880041999.01.T01 MTR_3g072820 28.378 296 182 8 60 337 42 325 1.38e-33 127
MsG0880041999.01.T01 MTR_7g062600 28.296 311 193 11 57 349 48 346 2.16e-33 127
MsG0880041999.01.T01 MTR_5g059140 29.268 287 171 9 60 326 42 316 2.74e-33 126
MsG0880041999.01.T01 MTR_8g074050 29.712 313 194 10 60 356 52 354 6.18e-33 125
MsG0880041999.01.T01 MTR_2g083000 31.010 287 174 6 60 336 33 305 6.76e-33 125
MsG0880041999.01.T01 MTR_2g102570 30.530 321 177 12 56 349 48 349 9.56e-33 125
MsG0880041999.01.T01 MTR_4g116010 29.825 285 174 9 60 329 50 323 3.41e-32 124
MsG0880041999.01.T01 MTR_1g032240 37.374 198 102 3 159 355 1 177 3.46e-32 119
MsG0880041999.01.T01 MTR_1g011580 29.739 306 183 11 60 351 63 350 3.48e-32 124
MsG0880041999.01.T01 MTR_5g055690 29.057 265 171 6 27 281 12 269 3.50e-32 122
MsG0880041999.01.T01 MTR_5g005570 32.721 272 148 7 51 302 28 284 4.37e-32 123
MsG0880041999.01.T01 MTR_0009s0480 32.443 262 159 10 27 278 11 264 1.00e-31 120
MsG0880041999.01.T01 MTR_5g048850 31.655 278 166 12 27 292 12 277 1.32e-31 120
MsG0880041999.01.T01 MTR_4g087130 28.664 307 182 7 60 336 26 325 1.52e-31 122
MsG0880041999.01.T01 MTR_1g070085 32.727 220 126 5 151 355 48 260 1.67e-31 120
MsG0880041999.01.T01 MTR_8g008960 68.919 74 23 0 283 356 29 102 2.15e-31 114
MsG0880041999.01.T01 MTR_8g033380 30.928 291 179 5 60 332 54 340 3.65e-31 121
MsG0880041999.01.T01 MTR_7g045650 29.066 289 174 11 27 295 24 301 4.41e-31 120
MsG0880041999.01.T01 MTR_8g074070 28.526 312 199 9 60 356 52 354 6.87e-31 120
MsG0880041999.01.T01 MTR_1g070100 32.727 220 126 5 151 355 44 256 1.56e-30 117
MsG0880041999.01.T01 MTR_7g062550 25.788 349 229 11 27 356 24 361 1.71e-30 119
MsG0880041999.01.T01 MTR_4g074130 29.528 254 164 5 60 302 40 289 9.86e-30 117
MsG0880041999.01.T01 MTR_2g072910 29.057 265 172 8 27 281 16 274 1.26e-29 115
MsG0880041999.01.T01 MTR_3g088745 28.846 312 171 11 61 339 37 330 1.57e-29 117
MsG0880041999.01.T01 MTR_3g096500 28.669 293 182 6 61 332 67 353 4.74e-29 115
MsG0880041999.01.T01 MTR_0009s0050 30.870 230 141 6 141 356 25 250 1.14e-28 112
MsG0880041999.01.T01 MTR_0009s0050 30.870 230 141 6 141 356 25 250 1.16e-28 112
MsG0880041999.01.T01 MTR_3g464530 27.937 315 182 11 60 355 34 322 1.86e-28 113
MsG0880041999.01.T01 MTR_3g072810 28.674 279 175 7 76 336 49 321 5.78e-28 112
MsG0880041999.01.T01 MTR_0009s0050 34.302 172 99 4 195 356 1 168 2.42e-27 106
MsG0880041999.01.T01 MTR_8g074070 27.597 308 188 9 60 356 52 335 2.46e-26 107
MsG0880041999.01.T01 MTR_3g117485 27.907 301 186 10 60 340 49 338 2.74e-26 107
MsG0880041999.01.T01 MTR_3g040410 28.525 305 155 12 59 329 5 280 3.76e-26 106
MsG0880041999.01.T01 MTR_0056s0160 34.158 202 113 6 158 349 35 226 3.78e-26 105
MsG0880041999.01.T01 MTR_8g093930 25.959 339 220 7 29 343 12 343 4.37e-26 107
MsG0880041999.01.T01 MTR_3g026150 32.000 225 137 8 57 273 57 273 4.61e-26 105
MsG0880041999.01.T01 MTR_5g025050 28.333 300 171 9 59 338 4 279 1.45e-25 105
MsG0880041999.01.T01 MTR_5g027230 27.907 301 173 10 56 336 2 278 1.76e-24 102
MsG0880041999.01.T01 MTR_2g025120 29.487 234 136 8 61 281 5 222 1.78e-24 100
MsG0880041999.01.T01 MTR_3g026150 28.906 256 157 9 108 346 1 248 3.01e-24 100
MsG0880041999.01.T01 MTR_2g070870 27.483 302 176 10 57 336 25 305 3.43e-24 101
MsG0880041999.01.T01 MTR_2g019370 26.984 315 184 10 60 346 28 324 6.94e-24 100
MsG0880041999.01.T01 MTR_2g437380 26.667 270 172 9 105 356 1 262 7.72e-24 99.4
MsG0880041999.01.T01 MTR_6g092620 28.470 281 164 11 59 315 2 269 2.44e-23 99.0
MsG0880041999.01.T01 MTR_3g083370 29.832 238 132 9 60 281 4 222 2.97e-23 97.1
MsG0880041999.01.T01 MTR_3g464530 27.706 231 145 6 60 281 34 251 3.88e-22 94.4
MsG0880041999.01.T01 MTR_5g025090 26.923 312 184 9 60 351 5 292 4.85e-22 95.1
MsG0880041999.01.T01 MTR_5g025060 27.491 291 162 10 56 336 2 253 5.58e-22 94.7
MsG0880041999.01.T01 MTR_8g461330 27.483 302 179 9 60 336 27 313 1.86e-21 94.0
MsG0880041999.01.T01 MTR_0009s0400 34.247 146 84 3 220 356 2 144 3.87e-21 89.0
MsG0880041999.01.T01 MTR_3g117485 27.985 268 162 10 93 340 10 266 1.96e-20 90.1
MsG0880041999.01.T01 MTR_4g099390 51.190 84 39 1 275 356 1 84 2.49e-20 84.7
MsG0880041999.01.T01 MTR_8g093980 24.845 322 204 9 60 353 59 370 1.01e-19 89.7
MsG0880041999.01.T01 MTR_4g115990 27.178 287 175 12 54 329 39 302 3.88e-19 87.4
MsG0880041999.01.T01 MTR_4g123020 27.365 296 184 10 59 336 19 301 6.24e-19 86.7
MsG0880041999.01.T01 MTR_1g086550 26.488 336 185 14 60 356 20 332 1.17e-18 86.3
MsG0880041999.01.T01 MTR_4g132770 41.935 93 45 2 222 305 32 124 2.69e-18 81.6
MsG0880041999.01.T01 MTR_6g088665 25.723 311 189 11 62 338 20 322 7.28e-18 84.0
MsG0880041999.01.T01 MTR_6g088665 25.879 313 187 12 62 338 20 323 2.36e-17 82.4
MsG0880041999.01.T01 MTR_1g070110 27.626 257 138 9 102 344 1 223 2.67e-17 80.5
MsG0880041999.01.T01 MTR_2g068850 29.146 199 115 6 27 203 21 215 9.15e-17 78.6
MsG0880041999.01.T01 MTR_8g030880 27.007 274 158 9 57 302 2 261 1.08e-16 80.1
MsG0880041999.01.T01 MTR_7g084360 37.037 162 60 3 172 329 7 130 4.51e-16 74.3
MsG0880041999.01.T01 MTR_1g027310 25.237 317 197 11 44 356 36 316 6.78e-16 77.8
MsG0880041999.01.T01 MTR_1g027290 25.685 292 184 11 60 328 29 310 7.42e-15 75.1
MsG0880041999.01.T01 MTR_1g032230 32.000 150 74 3 3 148 7 132 3.78e-14 72.0
MsG0880041999.01.T01 MTR_4g096840 25.397 315 186 12 56 339 22 318 4.69e-13 69.7
MsG0880041999.01.T01 MTR_7g090520 23.973 292 197 10 56 331 6 288 1.21e-12 68.2
MsG0880041999.01.T01 MTR_4g021380 22.951 305 200 11 60 339 7 301 2.82e-12 67.4
MsG0880041999.01.T01 MTR_4g011720 22.517 302 205 11 60 343 9 299 1.76e-11 64.7
MsG0880041999.01.T01 MTR_0009s0410 27.536 138 89 4 28 161 12 142 3.09e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041999.01.T01 AT1G06650 59.270 356 130 4 16 356 14 369 2.36e-157 446
MsG0880041999.01.T01 AT1G06620 58.739 349 132 3 19 356 18 365 1.89e-152 434
MsG0880041999.01.T01 AT5G59540 55.899 356 142 5 15 356 12 366 1.09e-148 424
MsG0880041999.01.T01 AT1G06640 56.474 363 142 5 9 356 8 369 9.13e-147 419
MsG0880041999.01.T01 AT1G06645 56.216 370 139 7 4 356 16 379 2.48e-146 419
MsG0880041999.01.T01 AT5G59530 55.742 357 140 7 15 356 11 364 2.33e-143 410
MsG0880041999.01.T01 AT1G04350 55.462 357 141 5 14 356 8 360 5.13e-143 409
MsG0880041999.01.T01 AT2G30840 56.338 355 140 5 16 356 9 362 1.72e-141 405
MsG0880041999.01.T01 AT2G30840 56.447 349 143 5 16 356 9 356 3.46e-139 399
MsG0880041999.01.T01 AT2G30830 54.571 350 148 4 17 356 10 358 1.05e-137 396
MsG0880041999.01.T01 AT1G04380 52.857 350 139 4 16 356 13 345 7.41e-136 390
MsG0880041999.01.T01 AT5G43440 52.381 357 153 4 15 356 11 365 1.04e-135 391
MsG0880041999.01.T01 AT1G03410 53.090 356 150 6 16 356 8 361 1.42e-134 388
MsG0880041999.01.T01 AT1G03410 53.090 356 150 6 16 356 45 398 7.91e-134 387
MsG0880041999.01.T01 AT5G43450 51.397 358 152 4 15 356 11 362 4.41e-131 379
MsG0880041999.01.T01 AT2G25450 53.824 353 149 6 16 356 9 359 1.66e-129 375
MsG0880041999.01.T01 AT3G61400 51.667 360 155 7 15 356 12 370 1.96e-129 375
MsG0880041999.01.T01 AT1G03400 51.412 354 149 6 16 356 8 351 6.80e-122 355
MsG0880041999.01.T01 AT1G03400 47.644 382 149 6 16 356 8 379 6.98e-117 343
MsG0880041999.01.T01 AT1G06620 57.678 267 109 2 19 282 18 283 7.95e-113 330
MsG0880041999.01.T01 AT1G06650 56.877 269 110 2 16 278 14 282 2.55e-111 327
MsG0880041999.01.T01 AT2G30840 55.515 272 116 2 16 282 9 280 1.01e-108 320
MsG0880041999.01.T01 AT5G59540 54.815 270 115 4 15 278 12 280 7.06e-108 317
MsG0880041999.01.T01 AT1G06640 53.684 285 125 3 4 282 3 286 1.14e-107 318
MsG0880041999.01.T01 AT1G06640 54.448 281 121 3 4 278 3 282 1.84e-107 316
MsG0880041999.01.T01 AT5G43440 51.273 275 125 3 15 282 11 283 3.76e-102 303
MsG0880041999.01.T01 AT5G43450 50.365 274 126 3 15 282 11 280 6.18e-98 292
MsG0880041999.01.T01 AT1G04380 48.936 282 123 4 1 281 1 262 6.13e-95 284
MsG0880041999.01.T01 AT3G61400 49.462 279 132 4 15 284 12 290 1.35e-94 284
MsG0880041999.01.T01 AT1G55290 32.845 341 204 8 27 351 25 356 1.11e-55 186
MsG0880041999.01.T01 AT3G13610 32.378 349 204 9 27 356 26 361 1.50e-54 183
MsG0880041999.01.T01 AT3G12900 33.333 336 208 7 27 351 21 351 1.98e-53 180
MsG0880041999.01.T01 AT4G10500 31.818 308 192 5 60 355 44 345 1.18e-51 175
MsG0880041999.01.T01 AT2G36690 31.461 356 210 9 25 356 18 363 1.82e-51 175
MsG0880041999.01.T01 AT2G36690 31.461 356 210 9 25 356 18 363 1.82e-51 175
MsG0880041999.01.T01 AT5G05600 32.581 310 188 7 56 349 58 362 1.27e-48 168
MsG0880041999.01.T01 AT4G10490 31.529 314 186 7 60 355 42 344 2.32e-48 167
MsG0880041999.01.T01 AT5G24530 30.945 307 194 4 60 354 38 338 9.05e-48 165
MsG0880041999.01.T01 AT1G17020 30.473 338 204 11 40 356 31 358 1.65e-47 164
MsG0880041999.01.T01 AT2G38240 30.347 346 208 11 21 344 5 339 2.81e-47 164
MsG0880041999.01.T01 AT3G11180 30.422 332 196 10 41 354 82 396 2.01e-44 157
MsG0880041999.01.T01 AT3G11180 30.887 327 191 10 41 349 82 391 4.13e-44 157
MsG0880041999.01.T01 AT4G25310 32.423 293 173 9 80 356 70 353 9.63e-44 154
MsG0880041999.01.T01 AT4G25300 30.303 330 204 10 40 351 30 351 5.76e-43 152
MsG0880041999.01.T01 AT3G51240 33.887 301 176 10 34 317 10 304 1.42e-42 152
MsG0880041999.01.T01 AT3G19010 33.657 309 156 9 55 329 23 316 9.07e-42 149
MsG0880041999.01.T01 AT3G19010 33.657 309 156 9 55 329 23 316 9.07e-42 149
MsG0880041999.01.T01 AT1G78550 30.462 325 203 8 48 356 39 356 1.26e-41 149
MsG0880041999.01.T01 AT3G55970 32.039 309 177 10 59 344 51 349 3.13e-40 145
MsG0880041999.01.T01 AT4G16330 29.870 308 185 9 60 351 67 359 3.81e-40 145
MsG0880041999.01.T01 AT5G08640 30.872 298 174 10 59 337 42 326 5.33e-40 144
MsG0880041999.01.T01 AT5G08640 30.872 298 174 10 59 337 42 326 5.33e-40 144
MsG0880041999.01.T01 AT1G17010 27.679 336 216 9 40 356 31 358 9.43e-40 144
MsG0880041999.01.T01 AT3G19000 31.596 307 176 8 57 336 29 328 1.70e-39 143
MsG0880041999.01.T01 AT3G21420 29.261 352 220 8 28 356 17 362 6.80e-39 142
MsG0880041999.01.T01 AT4G22880 30.872 298 174 9 60 334 47 335 6.36e-38 139
MsG0880041999.01.T01 AT4G22880 30.872 298 174 9 60 334 47 335 6.36e-38 139
MsG0880041999.01.T01 AT4G22880 30.872 298 174 9 60 334 47 335 6.36e-38 139
MsG0880041999.01.T01 AT3G19010 33.113 302 137 11 55 329 23 286 3.45e-37 136
MsG0880041999.01.T01 AT1G77330 29.739 306 180 11 59 343 2 293 7.96e-37 135
MsG0880041999.01.T01 AT4G25420 30.769 299 183 5 60 339 61 354 1.20e-36 136
MsG0880041999.01.T01 AT2G44800 28.994 338 218 8 21 342 9 340 5.75e-36 134
MsG0880041999.01.T01 AT4G21200 31.010 287 173 10 60 336 42 313 2.13e-35 132
MsG0880041999.01.T01 AT5G05600 32.189 233 150 4 56 281 58 289 2.34e-35 130
MsG0880041999.01.T01 AT1G78550 29.391 279 178 6 92 356 5 278 6.37e-35 129
MsG0880041999.01.T01 AT3G60290 29.333 300 182 7 60 341 52 339 1.90e-33 127
MsG0880041999.01.T01 AT1G62380 32.955 264 146 9 60 305 7 257 4.25e-33 125
MsG0880041999.01.T01 AT1G05010 30.556 288 172 10 60 328 4 282 6.41e-33 125
MsG0880041999.01.T01 AT5G63590 30.976 297 172 10 60 336 14 297 7.11e-33 124
MsG0880041999.01.T01 AT5G20400 31.338 284 176 7 60 329 45 323 1.41e-32 125
MsG0880041999.01.T01 AT1G12010 30.827 266 149 10 60 305 7 257 5.30e-32 122
MsG0880041999.01.T01 AT5G07480 26.349 315 187 10 55 340 39 337 9.03e-32 122
MsG0880041999.01.T01 AT1G15550 29.154 319 168 12 56 341 53 346 1.08e-31 122
MsG0880041999.01.T01 AT3G19000 30.802 237 141 6 57 274 29 261 2.87e-31 119
MsG0880041999.01.T01 AT5G12270 26.536 358 221 12 25 356 18 359 2.91e-31 121
MsG0880041999.01.T01 AT1G60980 28.571 301 187 5 60 337 57 352 3.17e-31 122
MsG0880041999.01.T01 AT5G51810 29.766 299 182 6 60 339 63 352 1.26e-30 120
MsG0880041999.01.T01 AT5G20550 29.275 345 216 11 28 352 9 345 1.77e-30 119
MsG0880041999.01.T01 AT4G16330 31.163 215 129 5 149 351 46 253 2.04e-30 117
MsG0880041999.01.T01 AT4G25420 31.897 232 145 3 60 280 61 290 5.52e-30 117
MsG0880041999.01.T01 AT3G19010 32.245 245 130 6 55 274 23 256 1.26e-29 115
MsG0880041999.01.T01 AT3G55970 32.203 236 140 7 60 281 52 281 1.57e-29 115
MsG0880041999.01.T01 AT4G25310 28.328 293 157 10 80 356 70 325 2.06e-29 115
MsG0880041999.01.T01 AT5G63600 28.956 297 171 11 60 336 33 309 2.43e-29 115
MsG0880041999.01.T01 AT5G63600 28.859 298 171 11 60 336 33 310 2.86e-29 115
MsG0880041999.01.T01 AT5G07200 29.487 312 189 7 15 301 13 318 7.15e-29 115
MsG0880041999.01.T01 AT1G80330 29.412 306 166 12 60 336 49 333 1.34e-27 111
MsG0880041999.01.T01 AT1G49390 28.483 323 208 9 28 332 9 326 3.79e-27 110
MsG0880041999.01.T01 AT5G51810 30.802 237 147 4 60 285 63 293 5.86e-27 108
MsG0880041999.01.T01 AT3G51240 33.880 183 105 4 133 301 27 207 2.07e-26 106
MsG0880041999.01.T01 AT4G25300 32.979 188 113 4 174 351 73 257 3.94e-26 105
MsG0880041999.01.T01 AT5G63595 27.985 268 128 9 56 297 21 249 6.33e-26 105
MsG0880041999.01.T01 AT5G54000 29.545 264 168 6 80 329 65 324 2.69e-25 105
MsG0880041999.01.T01 AT2G19590 29.496 278 160 10 60 315 11 274 3.06e-25 104
MsG0880041999.01.T01 AT1G30040 27.362 307 180 10 56 338 27 314 5.25e-24 101
MsG0880041999.01.T01 AT5G63580 27.311 238 158 5 57 287 16 245 1.08e-23 98.6
MsG0880041999.01.T01 AT4G21690 26.393 341 175 13 56 355 43 348 1.12e-23 100
MsG0880041999.01.T01 AT1G80340 26.724 348 180 13 40 341 21 339 1.26e-23 100
MsG0880041999.01.T01 AT1G44090 29.104 268 158 6 60 303 63 322 3.24e-23 99.8
MsG0880041999.01.T01 AT5G63580 27.706 231 152 5 57 280 16 238 4.17e-23 96.7
MsG0880041999.01.T01 AT1G50960 24.561 285 197 3 60 336 40 314 3.84e-22 96.3
MsG0880041999.01.T01 AT5G43935 26.246 301 163 13 60 337 19 283 2.04e-21 93.2
MsG0880041999.01.T01 AT1G49390 28.685 251 161 6 96 332 1 247 6.10e-21 91.7
MsG0880041999.01.T01 AT2G06960 37.500 128 71 3 216 343 27 145 1.53e-20 87.4
MsG0880041999.01.T01 AT2G34555 27.181 298 181 8 59 336 26 307 1.59e-20 91.7
MsG0880041999.01.T01 AT1G78440 26.174 298 188 8 59 336 17 302 2.73e-20 90.9
MsG0880041999.01.T01 AT5G58660 24.138 290 152 10 60 302 34 302 3.60e-20 90.9
MsG0880041999.01.T01 AT5G54000 28.226 248 160 6 96 329 1 244 8.71e-20 88.2
MsG0880041999.01.T01 AT3G47190 25.287 261 153 8 60 296 32 274 2.37e-18 85.1
MsG0880041999.01.T01 AT1G14130 28.472 288 159 10 59 316 8 278 3.03e-18 84.7
MsG0880041999.01.T01 AT4G23340 26.374 273 174 8 86 339 30 294 6.04e-18 84.0
MsG0880041999.01.T01 AT5G07480 28.947 190 115 7 166 340 44 228 6.17e-18 82.8
MsG0880041999.01.T01 AT2G19590 28.253 269 150 11 75 315 6 259 6.20e-18 83.6
MsG0880041999.01.T01 AT1G14120 28.947 266 146 10 59 302 7 251 7.10e-18 83.6
MsG0880041999.01.T01 AT1G14120 28.947 266 146 10 59 302 7 251 7.10e-18 83.6
MsG0880041999.01.T01 AT1G14120 28.947 266 146 10 59 302 7 251 7.10e-18 83.6
MsG0880041999.01.T01 AT3G49620 23.197 319 210 8 51 339 25 338 4.62e-13 70.1
MsG0880041999.01.T01 AT4G16770 26.068 234 149 7 55 270 17 244 1.02e-11 65.1
MsG0880041999.01.T01 AT4G23340 27.933 179 110 6 177 339 1 176 1.17e-11 63.9
MsG0880041999.01.T01 AT1G52820 21.753 308 223 8 60 354 12 314 1.36e-11 65.1

Find 79 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTATCAATATCTTTA+AGG 0.109801 8:-2317885 None:intergenic
GTTGTTCCCACAGTCATTTC+TGG 0.141656 8:-2319135 None:intergenic
AACTGTGGTTTCTCTGTATT+TGG 0.141866 8:-2319533 None:intergenic
TCTGATAATAGTTCCTTTAT+TGG 0.252969 8:-2319499 None:intergenic
TCCAAACCATCTAAAAGATA+TGG 0.256802 8:+2319059 MsG0880041999.01.T01:CDS
AGAGATATACTACTAGAATA+TGG 0.265186 8:+2318973 MsG0880041999.01.T01:intron
GAAACAAAAGCAGGTGTAAA+AGG 0.300249 8:+2317760 MsG0880041999.01.T01:CDS
CCCACAGTCATTTCTGGTTC+AGG 0.304695 8:-2319129 None:intergenic
CTTTATTGGTCCATAGAGTT+TGG 0.326576 8:-2319485 None:intergenic
CATACAACAGGAAAATCTTC+TGG 0.327118 8:-2318189 None:intergenic
AACAGGAAAATCTTCTGGTT+TGG 0.334664 8:-2318184 None:intergenic
CAAACTCTATGGACCAATAA+AGG 0.347608 8:+2319486 MsG0880041999.01.T01:CDS
AGGCCATCGTCCAAACTCTA+TGG 0.353617 8:+2319475 MsG0880041999.01.T01:CDS
ATTAGGCTTGGTTGTATTAG+TGG 0.360179 8:-2317701 None:intergenic
ACAGGAAAATCTTCTGGTTT+GGG 0.360417 8:-2318183 None:intergenic
AATAACATGGCTTGTGTTGT+AGG 0.361872 8:-2317851 None:intergenic
GATGGATACAGATACTAAAA+AGG 0.382797 8:+2318044 MsG0880041999.01.T01:CDS
ACTGTGGTTTCTCTGTATTT+GGG 0.383668 8:-2319532 None:intergenic
AAGCATGCAACGGATATTCT+TGG 0.388966 8:-2319436 None:intergenic
TCAAGGAAGCATGTGAAACT+TGG 0.407695 8:+2317941 MsG0880041999.01.T01:CDS
TAGGCTATCTCATATTTGTC+AGG 0.412342 8:-2317832 None:intergenic
AAGTTCTGTATGACGACAAA+TGG 0.412887 8:+2319217 MsG0880041999.01.T01:CDS
CATATTTGTCAGGTTGATGA+TGG 0.413248 8:-2317822 None:intergenic
TTTAATGCAAAAGGACTAGA+TGG 0.415229 8:+2319574 MsG0880041999.01.T01:CDS
CTGAATGTGGAATCAAGATT+AGG 0.417544 8:-2317718 None:intergenic
TCTTCTGGTTTGGGAGTGTC+AGG 0.420316 8:-2318174 None:intergenic
GGATACTTGTACTTGTTCCT+TGG 0.421196 8:+2318149 MsG0880041999.01.T01:CDS
ACTACTAGAATATGGGAAAC+AGG 0.425296 8:+2318981 MsG0880041999.01.T01:CDS
GCAGCCTACTTTAATGCAAA+AGG 0.427099 8:+2319565 MsG0880041999.01.T01:CDS
GCATTGTTGTCAGAAGCATT+AGG 0.428707 8:+2319030 MsG0880041999.01.T01:CDS
ATAGCTCACCAGCACTCAAT+TGG 0.445033 8:+2318124 MsG0880041999.01.T01:CDS
GGGAAACAGGTAATGAATCT+AGG 0.446970 8:+2318994 MsG0880041999.01.T01:CDS
ATATCTTTAAGGTCTATAAC+AGG 0.449508 8:-2317874 None:intergenic
CAGGACAAGGAGGATAATAA+TGG 0.457753 8:-2319110 None:intergenic
CCAAACCATCTAAAAGATAT+GGG 0.458558 8:+2319060 MsG0880041999.01.T01:CDS
ACAATCCCTTGATGAATACT+TGG 0.466300 8:-2317910 None:intergenic
GAGATATACTACTAGAATAT+GGG 0.479238 8:+2318974 MsG0880041999.01.T01:intron
GTGCTTCTACAAGACCATAT+TGG 0.485099 8:+2319186 MsG0880041999.01.T01:CDS
GAACTTGAAGACCACCAATA+TGG 0.485546 8:-2319200 None:intergenic
CAAGGAAGCATGTGAAACTT+GGG 0.488613 8:+2317942 MsG0880041999.01.T01:CDS
CATACATACCTGCATACAAC+AGG 0.493126 8:-2318201 None:intergenic
GTCATTTCTGGTTCAGGACA+AGG 0.500732 8:-2319123 None:intergenic
AAAGATATGGGTTGTGCTGA+AGG 0.500748 8:+2319072 MsG0880041999.01.T01:CDS
ATCTCCTCAAGAACACTCAA+AGG 0.510634 8:-2317994 None:intergenic
GAGTGTTCTTGAGGAGATGA+AGG 0.513387 8:+2317999 MsG0880041999.01.T01:CDS
GAAATCATTGTCACAATGCT+TGG 0.515295 8:-2319157 None:intergenic
AAAGATCCAAGTATTCATCA+AGG 0.518202 8:+2317904 MsG0880041999.01.T01:CDS
AGCTTTACGTTCGCTGAATG+TGG 0.520538 8:-2317731 None:intergenic
GCTCACCAGCACTCAATTGG+AGG 0.527842 8:+2318127 MsG0880041999.01.T01:CDS
TCTCCTCAAGAACACTCAAA+GGG 0.535297 8:-2317993 None:intergenic
GTGGTTTCTCTGTATTTGGG+AGG 0.538341 8:-2319529 None:intergenic
AGGGATTGTTAGCAAAATCA+AGG 0.538978 8:+2317924 MsG0880041999.01.T01:CDS
ACTACGAGAGCTCCAGGTAC+AGG 0.547426 8:-2319252 None:intergenic
AGATGAAGGATGGTGTGAAG+AGG 0.547649 8:+2318013 MsG0880041999.01.T01:CDS
ACATTAACTACGAGAGCTCC+AGG 0.550082 8:-2319258 None:intergenic
GTAAAAGGACTTGTTGATGC+AGG 0.552964 8:+2317775 MsG0880041999.01.T01:CDS
AATCCCTTTGAGTGTTCTTG+AGG 0.553310 8:+2317990 MsG0880041999.01.T01:CDS
GGTTGATGATGGAATAAGCT+TGG 0.560833 8:-2317811 None:intergenic
TTTGGGAGTGTCAGGAGCCA+AGG 0.560859 8:-2318166 None:intergenic
GTATCCCTCCAATTGAGTGC+TGG 0.565810 8:-2318132 None:intergenic
TGTGAAGAGGTTTCATGAGA+TGG 0.568486 8:+2318026 MsG0880041999.01.T01:CDS
AGAGTAGTTGCAAATCAAGT+TGG 0.579220 8:+2319412 MsG0880041999.01.T01:CDS
TGTGGAATCAAGATTAGGCT+TGG 0.581217 8:-2317713 None:intergenic
ATTGATATAACACCTGTACC+TGG 0.585161 8:+2319240 MsG0880041999.01.T01:CDS
AAGATATGGGTTGTGCTGAA+GGG 0.594313 8:+2319073 MsG0880041999.01.T01:CDS
AAGGAAGCATGTGAAACTTG+GGG 0.598891 8:+2317943 MsG0880041999.01.T01:CDS
AAGATCCAAGTATTCATCAA+GGG 0.612697 8:+2317905 MsG0880041999.01.T01:CDS
CTCACCAGCACTCAATTGGA+GGG 0.626812 8:+2318128 MsG0880041999.01.T01:CDS
GTTCTTGAGGAGATGAAGGA+TGG 0.628456 8:+2318003 MsG0880041999.01.T01:CDS
CTTCTACAAGACCATATTGG+TGG 0.634375 8:+2319189 MsG0880041999.01.T01:CDS
GGCTGCAAAATCAGCAACTG+TGG 0.639927 8:-2319548 None:intergenic
GGACGATGGCCTAAGACCTG+TGG 0.664618 8:-2319464 None:intergenic
GGTCTATAACAGGAATAACA+TGG 0.672802 8:-2317864 None:intergenic
TCCTGAACCAGAAATGACTG+TGG 0.682984 8:+2319128 MsG0880041999.01.T01:CDS
AGGAAGCATGTGAAACTTGG+GGG 0.692972 8:+2317944 MsG0880041999.01.T01:CDS
GGTCCATAGAGTTTGGACGA+TGG 0.703355 8:-2319478 None:intergenic
ATTTCTGGTTCAGGACAAGG+AGG 0.708647 8:-2319120 None:intergenic
CCTGAACCAGAAATGACTGT+GGG 0.714206 8:+2319129 MsG0880041999.01.T01:CDS
GGTCTTGTAGAAGCACTGTG+AGG 0.756387 8:-2319179 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAGTTGGTTTATATATA+TGG - Chr8:2318379-2318398 None:intergenic 15.0%
!! AAAATCATATCATATCCTAA+TGG + Chr8:2318845-2318864 MsG0880041999.01.T01:intron 20.0%
!! AGATAATTAAGAGATAAGAT+AGG + Chr8:2318428-2318447 MsG0880041999.01.T01:intron 20.0%
!! ATGAAAATAACTAAAGTTCA+AGG - Chr8:2318257-2318276 None:intergenic 20.0%
!! CTTGTAAAAAAAATATAGCA+TGG + Chr8:2318587-2318606 MsG0880041999.01.T01:intron 20.0%
!! TAAATTCAATTTCAGACATT+TGG - Chr8:2318931-2318950 None:intergenic 20.0%
!! TTTATATATATGGATATCAG+AGG - Chr8:2318369-2318388 None:intergenic 20.0%
!!! ATATAATATAAAGCACCATT+AGG - Chr8:2318863-2318882 None:intergenic 20.0%
!!! ATATGAGTTAAAGTATCTAA+AGG - Chr8:2318674-2318693 None:intergenic 20.0%
!!! CTTTGTTATCAATATCTTTA+AGG - Chr8:2317888-2317907 None:intergenic 20.0%
!!! TGAACTTTAGTTATTTTCAT+TGG + Chr8:2318257-2318276 MsG0880041999.01.T01:intron 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG + Chr8:2317967-2317986 MsG0880041999.01.T01:CDS 20.0%
! AAGTATCTAAAGGACAAAAA+AGG - Chr8:2318664-2318683 None:intergenic 25.0%
! AGAGATATACTACTAGAATA+TGG + Chr8:2318973-2318992 MsG0880041999.01.T01:intron 25.0%
! AGTATCTAAAGGACAAAAAA+GGG - Chr8:2318663-2318682 None:intergenic 25.0%
! ATCATACAATATATTTGACG+CGG - Chr8:2318779-2318798 None:intergenic 25.0%
! CCAACTTATACGAAATATAA+AGG + Chr8:2318389-2318408 MsG0880041999.01.T01:intron 25.0%
! CCTTTATATTTCGTATAAGT+TGG - Chr8:2318392-2318411 None:intergenic 25.0%
! GAGATATACTACTAGAATAT+GGG + Chr8:2318974-2318993 MsG0880041999.01.T01:intron 25.0%
! TCTGATAATAGTTCCTTTAT+TGG - Chr8:2319502-2319521 None:intergenic 25.0%
! TGAACACATCTTTATCTAAA+GGG - Chr8:2318292-2318311 None:intergenic 25.0%
! TTGAACACATCTTTATCTAA+AGG - Chr8:2318293-2318312 None:intergenic 25.0%
!! TTTTATACAAGAGATATGCA+TGG + Chr8:2318069-2318088 MsG0880041999.01.T01:CDS 25.0%
!!! ATATCTTTAAGGTCTATAAC+AGG - Chr8:2317877-2317896 None:intergenic 25.0%
!!! ATCATTTGTTATAAGCTACA+AGG - Chr8:2319371-2319390 None:intergenic 25.0%
!!! TAAGTTTTAACTACAGAGAT+AGG - Chr8:2318535-2318554 None:intergenic 25.0%
AAAGATCCAAGTATTCATCA+AGG + Chr8:2317904-2317923 MsG0880041999.01.T01:CDS 30.0%
AAGATCCAAGTATTCATCAA+GGG + Chr8:2317905-2317924 MsG0880041999.01.T01:CDS 30.0%
AAGTTTAACAATGAGTCTTG+AGG - Chr8:2318570-2318589 None:intergenic 30.0%
CCAAACCATCTAAAAGATAT+GGG + Chr8:2319060-2319079 MsG0880041999.01.T01:CDS 30.0%
GATGGATACAGATACTAAAA+AGG + Chr8:2318044-2318063 MsG0880041999.01.T01:CDS 30.0%
TCAATTTAGTGTTTGATGAG+AGG + Chr8:2318472-2318491 MsG0880041999.01.T01:intron 30.0%
TCCAAACCATCTAAAAGATA+TGG + Chr8:2319059-2319078 MsG0880041999.01.T01:CDS 30.0%
TTTAATGCAAAAGGACTAGA+TGG + Chr8:2319574-2319593 MsG0880041999.01.T01:CDS 30.0%
! TAGTCCTTTTGCATTAAAGT+AGG - Chr8:2319572-2319591 None:intergenic 30.0%
AACTGTGGTTTCTCTGTATT+TGG - Chr8:2319536-2319555 None:intergenic 35.0%
AAGTTCTGTATGACGACAAA+TGG + Chr8:2319217-2319236 MsG0880041999.01.T01:CDS 35.0%
ACAATCCCTTGATGAATACT+TGG - Chr8:2317913-2317932 None:intergenic 35.0%
ACTACTAGAATATGGGAAAC+AGG + Chr8:2318981-2319000 MsG0880041999.01.T01:CDS 35.0%
ACTGTGGTTTCTCTGTATTT+GGG - Chr8:2319535-2319554 None:intergenic 35.0%
AGAGTAGTTGCAAATCAAGT+TGG + Chr8:2319412-2319431 MsG0880041999.01.T01:CDS 35.0%
AGGGATTGTTAGCAAAATCA+AGG + Chr8:2317924-2317943 MsG0880041999.01.T01:CDS 35.0%
ATTGATATAACACCTGTACC+TGG + Chr8:2319240-2319259 MsG0880041999.01.T01:CDS 35.0%
CAAACTCTATGGACCAATAA+AGG + Chr8:2319486-2319505 MsG0880041999.01.T01:CDS 35.0%
CACATCTTTATCTAAAGGGT+CGG - Chr8:2318288-2318307 None:intergenic 35.0%
CATACAACAGGAAAATCTTC+TGG - Chr8:2318192-2318211 None:intergenic 35.0%
CATGTACATGTGTAGCAAAT+GGG + Chr8:2318904-2318923 MsG0880041999.01.T01:intron 35.0%
CGAAATATAAAGGCTGTGTT+TGG + Chr8:2318399-2318418 MsG0880041999.01.T01:intron 35.0%
CTGAATGTGGAATCAAGATT+AGG - Chr8:2317721-2317740 None:intergenic 35.0%
CTTTATTGGTCCATAGAGTT+TGG - Chr8:2319488-2319507 None:intergenic 35.0%
GAAACAAAAGCAGGTGTAAA+AGG + Chr8:2317760-2317779 MsG0880041999.01.T01:CDS 35.0%
GAAATCATTGTCACAATGCT+TGG - Chr8:2319160-2319179 None:intergenic 35.0%
GGAAATTATGCTTGAAACGA+TGG - Chr8:2318642-2318661 None:intergenic 35.0%
GGTCTATAACAGGAATAACA+TGG - Chr8:2317867-2317886 None:intergenic 35.0%
GTCACAAAGTTGTATGGTTT+GGG + Chr8:2318609-2318628 MsG0880041999.01.T01:intron 35.0%
TAGGCTATCTCATATTTGTC+AGG - Chr8:2317835-2317854 None:intergenic 35.0%
TAGTGTTTGATGAGAGGATA+TGG + Chr8:2318478-2318497 MsG0880041999.01.T01:intron 35.0%
TCATGTACATGTGTAGCAAA+TGG + Chr8:2318903-2318922 MsG0880041999.01.T01:intron 35.0%
! AACAGGAAAATCTTCTGGTT+TGG - Chr8:2318187-2318206 None:intergenic 35.0%
! AAGATTTTCCTGTTGTATGC+AGG + Chr8:2318193-2318212 MsG0880041999.01.T01:CDS 35.0%
! AATAACATGGCTTGTGTTGT+AGG - Chr8:2317854-2317873 None:intergenic 35.0%
! ATTAGGCTTGGTTGTATTAG+TGG - Chr8:2317704-2317723 None:intergenic 35.0%
! CACAACCCATATCTTTTAGA+TGG - Chr8:2319068-2319087 None:intergenic 35.0%
! CCCATATCTTTTAGATGGTT+TGG - Chr8:2319063-2319082 None:intergenic 35.0%
! GCTTTTGATGAAACAAAAGC+AGG + Chr8:2317751-2317770 MsG0880041999.01.T01:CDS 35.0%
!! ACAGGAAAATCTTCTGGTTT+GGG - Chr8:2318186-2318205 None:intergenic 35.0%
!! CATATTTGTCAGGTTGATGA+TGG - Chr8:2317825-2317844 None:intergenic 35.0%
!!! TAATGTTGGTGATCTTTTGC+AGG + Chr8:2319275-2319294 MsG0880041999.01.T01:intron 35.0%
AAGCATGCAACGGATATTCT+TGG - Chr8:2319439-2319458 None:intergenic 40.0%
AATCCCTTTGAGTGTTCTTG+AGG + Chr8:2317990-2318009 MsG0880041999.01.T01:CDS 40.0%
AGCATGGTCACAAAGTTGTA+TGG + Chr8:2318603-2318622 MsG0880041999.01.T01:intron 40.0%
ATCTCCTCAAGAACACTCAA+AGG - Chr8:2317997-2318016 None:intergenic 40.0%
CAGGACAAGGAGGATAATAA+TGG - Chr8:2319113-2319132 None:intergenic 40.0%
CATACATACCTGCATACAAC+AGG - Chr8:2318204-2318223 None:intergenic 40.0%
CTTCTACAAGACCATATTGG+TGG + Chr8:2319189-2319208 MsG0880041999.01.T01:CDS 40.0%
GAACTTGAAGACCACCAATA+TGG - Chr8:2319203-2319222 None:intergenic 40.0%
GCAGCCTACTTTAATGCAAA+AGG + Chr8:2319565-2319584 MsG0880041999.01.T01:CDS 40.0%
GGATACTTGTACTTGTTCCT+TGG + Chr8:2318149-2318168 MsG0880041999.01.T01:CDS 40.0%
GGGAAACAGGTAATGAATCT+AGG + Chr8:2318994-2319013 MsG0880041999.01.T01:CDS 40.0%
GGTCACAAAGTTGTATGGTT+TGG + Chr8:2318608-2318627 MsG0880041999.01.T01:intron 40.0%
GTGCTTCTACAAGACCATAT+TGG + Chr8:2319186-2319205 MsG0880041999.01.T01:CDS 40.0%
TCTCCTCAAGAACACTCAAA+GGG - Chr8:2317996-2318015 None:intergenic 40.0%
TGTGAAGAGGTTTCATGAGA+TGG + Chr8:2318026-2318045 MsG0880041999.01.T01:CDS 40.0%
TGTGGAATCAAGATTAGGCT+TGG - Chr8:2317716-2317735 None:intergenic 40.0%
! AAAGATATGGGTTGTGCTGA+AGG + Chr8:2319072-2319091 MsG0880041999.01.T01:CDS 40.0%
! AAGATATGGGTTGTGCTGAA+GGG + Chr8:2319073-2319092 MsG0880041999.01.T01:CDS 40.0%
! AAGGAAGCATGTGAAACTTG+GGG + Chr8:2317943-2317962 MsG0880041999.01.T01:CDS 40.0%
! ACAAAGTTGTATGGTTTGGG+TGG + Chr8:2318612-2318631 MsG0880041999.01.T01:intron 40.0%
! CAAGGAAGCATGTGAAACTT+GGG + Chr8:2317942-2317961 MsG0880041999.01.T01:CDS 40.0%
! TCAAGGAAGCATGTGAAACT+TGG + Chr8:2317941-2317960 MsG0880041999.01.T01:CDS 40.0%
! TGTGGAGAAAAAGCATGCAA+CGG - Chr8:2319449-2319468 None:intergenic 40.0%
!! GCATTGTTGTCAGAAGCATT+AGG + Chr8:2319030-2319049 MsG0880041999.01.T01:CDS 40.0%
!! GGTTGATGATGGAATAAGCT+TGG - Chr8:2317814-2317833 None:intergenic 40.0%
!! GTAAAAGGACTTGTTGATGC+AGG + Chr8:2317775-2317794 MsG0880041999.01.T01:CDS 40.0%
ACATTAACTACGAGAGCTCC+AGG - Chr8:2319261-2319280 None:intergenic 45.0%
AGATGAAGGATGGTGTGAAG+AGG + Chr8:2318013-2318032 MsG0880041999.01.T01:CDS 45.0%
AGCTTTACGTTCGCTGAATG+TGG - Chr8:2317734-2317753 None:intergenic 45.0%
ATAGCTCACCAGCACTCAAT+TGG + Chr8:2318124-2318143 MsG0880041999.01.T01:CDS 45.0%
CAATGAGTCTTGAGGCATAG+TGG - Chr8:2318562-2318581 None:intergenic 45.0%
CCTGAACCAGAAATGACTGT+GGG + Chr8:2319129-2319148 MsG0880041999.01.T01:CDS 45.0%
GAGTGTTCTTGAGGAGATGA+AGG + Chr8:2317999-2318018 MsG0880041999.01.T01:CDS 45.0%
GGAGCTCTCGTAGTTAATGT+TGG + Chr8:2319261-2319280 MsG0880041999.01.T01:intron 45.0%
GTGGTTTCTCTGTATTTGGG+AGG - Chr8:2319532-2319551 None:intergenic 45.0%
GTTCTTGAGGAGATGAAGGA+TGG + Chr8:2318003-2318022 MsG0880041999.01.T01:CDS 45.0%
GTTGTTCCCACAGTCATTTC+TGG - Chr8:2319138-2319157 None:intergenic 45.0%
TCCTGAACCAGAAATGACTG+TGG + Chr8:2319128-2319147 MsG0880041999.01.T01:CDS 45.0%
! AGGAAGCATGTGAAACTTGG+GGG + Chr8:2317944-2317963 MsG0880041999.01.T01:CDS 45.0%
!! ATTTCTGGTTCAGGACAAGG+AGG - Chr8:2319123-2319142 None:intergenic 45.0%
!! GCTTTTTCTCCACAGGTCTT+AGG + Chr8:2319455-2319474 MsG0880041999.01.T01:CDS 45.0%
!! GTCATTTCTGGTTCAGGACA+AGG - Chr8:2319126-2319145 None:intergenic 45.0%
!!! GTTGCATGCTTTTTCTCCAC+AGG + Chr8:2319448-2319467 MsG0880041999.01.T01:CDS 45.0%
AGGCCATCGTCCAAACTCTA+TGG + Chr8:2319475-2319494 MsG0880041999.01.T01:CDS 50.0%
CTCACCAGCACTCAATTGGA+GGG + Chr8:2318128-2318147 MsG0880041999.01.T01:CDS 50.0%
GGCTGCAAAATCAGCAACTG+TGG - Chr8:2319551-2319570 None:intergenic 50.0%
GGTCCATAGAGTTTGGACGA+TGG - Chr8:2319481-2319500 None:intergenic 50.0%
GTATCCCTCCAATTGAGTGC+TGG - Chr8:2318135-2318154 None:intergenic 50.0%
!! CCCACAGTCATTTCTGGTTC+AGG - Chr8:2319132-2319151 None:intergenic 50.0%
!! GGTCTTGTAGAAGCACTGTG+AGG - Chr8:2319182-2319201 None:intergenic 50.0%
!! TCTTCTGGTTTGGGAGTGTC+AGG - Chr8:2318177-2318196 None:intergenic 50.0%
ACTACGAGAGCTCCAGGTAC+AGG - Chr8:2319255-2319274 None:intergenic 55.0%
GCTCACCAGCACTCAATTGG+AGG + Chr8:2318127-2318146 MsG0880041999.01.T01:CDS 55.0%
!! TTTGGGAGTGTCAGGAGCCA+AGG - Chr8:2318169-2318188 None:intergenic 55.0%
GGACGATGGCCTAAGACCTG+TGG - Chr8:2319467-2319486 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2317694 2319627 2317694 ID=MsG0880041999.01;Name=MsG0880041999.01
Chr8 mRNA 2317694 2319627 2317694 ID=MsG0880041999.01.T01;Parent=MsG0880041999.01;Name=MsG0880041999.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|3|0|356
Chr8 exon 2317694 2318214 2317694 ID=MsG0880041999.01.T01:exon:1531;Parent=MsG0880041999.01.T01
Chr8 exon 2318975 2319272 2318975 ID=MsG0880041999.01.T01:exon:1532;Parent=MsG0880041999.01.T01
Chr8 exon 2319376 2319627 2319376 ID=MsG0880041999.01.T01:exon:1533;Parent=MsG0880041999.01.T01
Chr8 CDS 2317694 2318214 2317694 ID=MsG0880041999.01.T01:cds;Parent=MsG0880041999.01.T01
Chr8 CDS 2318975 2319272 2318975 ID=MsG0880041999.01.T01:cds;Parent=MsG0880041999.01.T01
Chr8 CDS 2319376 2319627 2319376 ID=MsG0880041999.01.T01:cds;Parent=MsG0880041999.01.T01
Gene Sequence

>MsG0880041999.01.T01

ATGGGAACCACTAATACAACCAAGCCTAATCTTGATTCCACATTCAGCGAACGTAAAGCTTTTGATGAAACAAAAGCAGGTGTAAAAGGACTTGTTGATGCAGGAGTTAAGAAGATACCAAGCTTATTCCATCATCAACCTGACAAATATGAGATAGCCTACAACACAAGCCATGTTATTCCTGTTATAGACCTTAAAGATATTGATAACAAAGATCCAAGTATTCATCAAGGGATTGTTAGCAAAATCAAGGAAGCATGTGAAACTTGGGGGTTTTTTCAAGTTGTTAATCATGGAATCCCTTTGAGTGTTCTTGAGGAGATGAAGGATGGTGTGAAGAGGTTTCATGAGATGGATACAGATACTAAAAAGGAGTTTTATACAAGAGATATGCATGGATCATTTATTTACAAAAGTAATTTTGATTTGTATAGCTCACCAGCACTCAATTGGAGGGATACTTGTACTTGTTCCTTGGCTCCTGACACTCCCAAACCAGAAGATTTTCCTGTTGTATGCAGAGATATACTACTAGAATATGGGAAACAGGTAATGAATCTAGGAACTTTACTGTTTGCATTGTTGTCAGAAGCATTAGGCTTGAATCCAAACCATCTAAAAGATATGGGTTGTGCTGAAGGGCTAATTGCTCTTTGCCATTATTATCCTCCTTGTCCTGAACCAGAAATGACTGTGGGAACAACCAAGCATTGTGACAATGATTTCCTCACAGTGCTTCTACAAGACCATATTGGTGGTCTTCAAGTTCTGTATGACGACAAATGGATTGATATAACACCTGTACCTGGAGCTCTCGTACTTATAACAAATGATAGATTCAAGAGTGTTGAACATAGAGTAGTTGCAAATCAAGTTGGTCCAAGAATATCCGTTGCATGCTTTTTCTCCACAGGTCTTAGGCCATCGTCCAAACTCTATGGACCAATAAAGGAACTATTATCAGAAAACAATCCTCCCAAATACAGAGAAACCACAGTTGCTGATTTTGCAGCCTACTTTAATGCAAAAGGACTAGATGGTACTTCTGCTCTTACACATTACAAGATTTGA

Protein sequence

>MsG0880041999.01.T01

MGTTNTTKPNLDSTFSERKAFDETKAGVKGLVDAGVKKIPSLFHHQPDKYEIAYNTSHVIPVIDLKDIDNKDPSIHQGIVSKIKEACETWGFFQVVNHGIPLSVLEEMKDGVKRFHEMDTDTKKEFYTRDMHGSFIYKSNFDLYSSPALNWRDTCTCSLAPDTPKPEDFPVVCRDILLEYGKQVMNLGTLLFALLSEALGLNPNHLKDMGCAEGLIALCHYYPPCPEPEMTVGTTKHCDNDFLTVLLQDHIGGLQVLYDDKWIDITPVPGALVLITNDRFKSVEHRVVANQVGPRISVACFFSTGLRPSSKLYGPIKELLSENNPPKYRETTVADFAAYFNAKGLDGTSALTHYKI*