AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042006.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042006.01.T01 MTR_8g009170 92.929 297 21 0 1 297 1 297 0.0 578
MsG0880042006.01.T01 MTR_8g009170 92.908 282 20 0 1 282 1 282 0.0 550
MsG0880042006.01.T01 MTR_8g009110 87.589 282 35 0 1 282 1 282 0.0 523
MsG0880042006.01.T01 MTR_8g009160 84.752 282 42 1 1 282 1 281 0.0 508
MsG0880042006.01.T01 MTR_8g028435 86.879 282 36 1 1 282 1 281 0.0 505
MsG0880042006.01.T01 MTR_8g009090 84.397 282 43 1 1 282 1 281 7.89e-180 500
MsG0880042006.01.T01 MTR_8g008930 81.272 283 51 2 1 282 1 282 1.71e-173 484
MsG0880042006.01.T01 MTR_8g009150 80.142 282 36 1 1 282 1 262 6.31e-167 467
MsG0880042006.01.T01 MTR_8g009120 80.070 286 45 1 1 286 1 274 1.19e-166 466
MsG0880042006.01.T01 MTR_4g117880 72.792 283 75 2 1 282 1 282 4.84e-152 430
MsG0880042006.01.T01 MTR_2g069210 64.789 284 94 4 2 282 4 284 4.34e-136 390
MsG0880042006.01.T01 MTR_2g069090 65.292 291 90 5 1 282 1 289 3.27e-133 382
MsG0880042006.01.T01 MTR_2g069190 66.176 272 87 3 14 282 19 288 5.59e-132 379
MsG0880042006.01.T01 MTR_2g069300 63.504 274 94 4 13 282 4 275 5.27e-126 363
MsG0880042006.01.T01 MTR_8g009080 59.786 281 107 4 6 283 38 315 6.55e-123 355
MsG0880042006.01.T01 MTR_8g009080 60.000 280 106 4 6 282 38 314 1.34e-121 354
MsG0880042006.01.T01 MTR_8g009080 59.567 277 106 4 6 279 38 311 3.09e-120 348
MsG0880042006.01.T01 MTR_1g043775 58.065 279 111 5 14 289 6 281 2.27e-114 332
MsG0880042006.01.T01 MTR_1g043760 58.672 271 107 4 14 282 6 273 1.53e-113 332
MsG0880042006.01.T01 MTR_1g043770 58.955 268 106 4 19 285 11 275 2.39e-112 327
MsG0880042006.01.T01 MTR_1g043775 58.824 272 106 5 14 282 6 274 2.75e-112 329
MsG0880042006.01.T01 MTR_1g043810 57.509 273 110 5 14 283 6 275 9.55e-112 326
MsG0880042006.01.T01 MTR_1g043770 58.868 265 105 4 19 282 11 272 5.39e-111 325
MsG0880042006.01.T01 MTR_1g043810 57.353 272 110 5 14 282 6 274 9.30e-111 325
MsG0880042006.01.T01 MTR_8g041600 52.941 289 124 5 17 296 22 307 7.91e-110 321
MsG0880042006.01.T01 MTR_8g041620 55.515 272 112 4 17 282 22 290 2.69e-108 320
MsG0880042006.01.T01 MTR_8g041600 54.412 272 115 4 17 282 22 290 2.14e-106 315
MsG0880042006.01.T01 MTR_7g056347 50.554 271 130 4 14 282 19 287 1.11e-101 302
MsG0880042006.01.T01 MTR_1g093120 52.364 275 117 6 17 282 18 287 1.80e-101 301
MsG0880042006.01.T01 MTR_0032s0040 53.191 282 115 4 13 282 13 289 2.23e-100 299
MsG0880042006.01.T01 MTR_8g063070 48.057 283 140 5 5 282 7 287 2.90e-100 299
MsG0880042006.01.T01 MTR_1g093140 49.823 283 125 5 13 282 15 293 7.85e-99 295
MsG0880042006.01.T01 MTR_7g029655 49.458 277 128 3 13 282 13 284 2.79e-98 293
MsG0880042006.01.T01 MTR_2g069060 53.818 275 104 6 10 282 16 269 3.63e-98 293
MsG0880042006.01.T01 MTR_8g006930 51.429 280 131 4 5 282 11 287 3.44e-97 291
MsG0880042006.01.T01 MTR_2g069010 50.000 278 132 5 9 282 15 289 2.20e-96 289
MsG0880042006.01.T01 MTR_1g093110 48.936 282 124 5 14 282 16 290 2.92e-96 288
MsG0880042006.01.T01 MTR_7g078010 51.460 274 125 4 17 286 22 291 7.69e-96 285
MsG0880042006.01.T01 MTR_4g119410 52.985 268 122 4 17 282 22 287 2.00e-95 286
MsG0880042006.01.T01 MTR_2g069060 56.277 231 99 2 54 284 21 249 8.05e-95 281
MsG0880042006.01.T01 MTR_7g078010 51.852 270 122 4 17 282 22 287 2.80e-94 283
MsG0880042006.01.T01 MTR_2g068950 48.264 288 138 6 1 282 1 283 6.24e-94 282
MsG0880042006.01.T01 MTR_2g069020 49.077 271 132 4 16 282 19 287 1.02e-92 279
MsG0880042006.01.T01 MTR_2g068960 48.264 288 138 6 1 282 1 283 2.27e-92 278
MsG0880042006.01.T01 MTR_2g069020 49.077 271 132 4 16 282 19 287 2.84e-92 279
MsG0880042006.01.T01 MTR_8g062600 46.840 269 139 3 16 282 21 287 5.91e-90 272
MsG0880042006.01.T01 MTR_4g024660 47.015 268 138 4 17 282 22 287 9.50e-89 269
MsG0880042006.01.T01 MTR_7g056393 48.214 280 140 5 5 282 11 287 1.11e-85 261
MsG0880042006.01.T01 MTR_1g070185 44.280 271 146 2 14 282 20 287 1.15e-82 254
MsG0880042006.01.T01 MTR_8g469400 45.230 283 135 7 5 282 7 274 1.06e-79 246
MsG0880042006.01.T01 MTR_8g009180 74.251 167 26 4 132 282 46 211 2.62e-79 243
MsG0880042006.01.T01 MTR_7g105070 41.199 267 151 3 19 282 15 278 4.31e-72 226
MsG0880042006.01.T01 MTR_7g056353 41.573 267 126 5 17 282 24 261 6.50e-67 217
MsG0880042006.01.T01 MTR_1g032220 41.418 268 148 3 19 282 28 290 8.28e-66 211
MsG0880042006.01.T01 MTR_1g032140 39.731 297 168 4 4 296 6 295 1.12e-64 207
MsG0880042006.01.T01 MTR_1g032250 40.672 268 150 3 19 282 28 290 7.48e-64 206
MsG0880042006.01.T01 MTR_1g044105 53.254 169 68 5 14 174 6 171 5.21e-53 171
MsG0880042006.01.T01 MTR_7g068650 34.247 292 175 8 19 296 6 294 6.61e-52 174
MsG0880042006.01.T01 MTR_3g092890 37.445 227 133 3 60 283 38 258 4.06e-47 161
MsG0880042006.01.T01 MTR_4g015790 33.108 296 164 8 28 296 14 302 8.73e-46 159
MsG0880042006.01.T01 MTR_7g056370 39.572 187 109 4 18 202 2 186 1.17e-45 154
MsG0880042006.01.T01 MTR_2g068840 37.269 271 145 9 27 282 21 281 1.96e-44 155
MsG0880042006.01.T01 MTR_3g091350 33.904 292 168 9 3 283 6 283 4.71e-44 154
MsG0880042006.01.T01 MTR_2g068800 34.701 268 137 7 27 282 21 262 3.55e-41 144
MsG0880042006.01.T01 MTR_1g043840 59.813 107 43 0 176 282 50 156 1.38e-40 144
MsG0880042006.01.T01 MTR_1g043840 60.811 74 28 1 71 144 256 328 1.84e-24 101
MsG0880042006.01.T01 MTR_1g062110 32.616 279 164 9 27 287 26 298 2.33e-40 143
MsG0880042006.01.T01 MTR_5g055690 32.090 268 168 6 27 286 12 273 4.68e-40 141
MsG0880042006.01.T01 MTR_1g034120 34.677 248 134 7 60 283 26 269 4.77e-40 143
MsG0880042006.01.T01 MTR_8g024120 33.043 230 149 2 56 283 38 264 8.39e-40 142
MsG0880042006.01.T01 MTR_5g082750 34.413 247 153 5 56 296 45 288 8.67e-40 142
MsG0880042006.01.T01 MTR_3g070860 31.071 280 183 5 19 289 6 284 9.43e-40 142
MsG0880042006.01.T01 MTR_1g062110 32.117 274 162 8 27 282 26 293 2.24e-39 142
MsG0880042006.01.T01 MTR_5g048850 33.569 283 161 9 27 296 12 280 3.22e-39 141
MsG0880042006.01.T01 MTR_1g034060 33.603 247 138 7 60 283 26 269 3.36e-39 140
MsG0880042006.01.T01 MTR_5g048850 33.704 270 154 8 27 283 12 269 5.04e-39 138
MsG0880042006.01.T01 MTR_4g099380 42.857 168 85 3 12 175 122 282 5.13e-39 138
MsG0880042006.01.T01 MTR_3g091360 36.564 227 139 5 60 283 52 276 6.51e-39 140
MsG0880042006.01.T01 MTR_1g070120 36.522 230 137 5 57 282 35 259 7.79e-39 139
MsG0880042006.01.T01 MTR_5g055690 32.576 264 164 6 27 282 12 269 9.70e-39 139
MsG0880042006.01.T01 MTR_1g070135 31.890 254 159 7 46 295 26 269 2.23e-38 137
MsG0880042006.01.T01 MTR_1g070080 33.766 231 144 5 56 282 34 259 7.76e-38 137
MsG0880042006.01.T01 MTR_8g075890 33.466 251 156 6 37 279 14 261 8.05e-38 137
MsG0880042006.01.T01 MTR_1g070135 31.518 257 161 7 34 282 10 259 1.53e-37 136
MsG0880042006.01.T01 MTR_0328s0030 32.384 281 167 7 27 296 10 278 2.30e-37 136
MsG0880042006.01.T01 MTR_0009s0050 32.862 283 163 10 27 296 12 280 2.55e-37 136
MsG0880042006.01.T01 MTR_0009s0480 33.333 267 161 8 27 284 11 269 3.24e-37 133
MsG0880042006.01.T01 MTR_0009s0050 32.862 283 163 10 27 296 12 280 3.46e-37 135
MsG0880042006.01.T01 MTR_7g102820 30.282 284 170 8 23 282 21 300 4.04e-37 136
MsG0880042006.01.T01 MTR_3g063180 32.075 265 162 7 28 279 10 269 8.92e-37 134
MsG0880042006.01.T01 MTR_5g055900 32.509 283 164 9 27 296 12 280 1.49e-36 134
MsG0880042006.01.T01 MTR_1g070085 31.878 229 150 3 57 282 34 259 1.65e-36 133
MsG0880042006.01.T01 MTR_1g070085 31.878 229 150 3 57 282 34 259 1.65e-36 133
MsG0880042006.01.T01 MTR_5g048740 33.333 279 168 10 27 296 10 279 2.04e-36 133
MsG0880042006.01.T01 MTR_5g032870 34.632 231 142 5 60 283 38 266 2.81e-36 133
MsG0880042006.01.T01 MTR_0009s0480 33.333 267 161 8 27 284 11 269 3.10e-36 133
MsG0880042006.01.T01 MTR_5g055800 32.246 276 174 7 27 296 12 280 3.24e-36 133
MsG0880042006.01.T01 MTR_4g087100 32.245 245 140 5 60 282 26 266 3.44e-36 133
MsG0880042006.01.T01 MTR_7g451860 32.301 226 148 3 60 283 41 263 3.52e-36 132
MsG0880042006.01.T01 MTR_7g047670 32.301 226 148 3 60 283 41 263 3.52e-36 132
MsG0880042006.01.T01 MTR_4g087090 30.000 240 149 4 60 283 30 266 4.67e-36 132
MsG0880042006.01.T01 MTR_5g048570 30.249 281 171 8 27 296 12 278 8.71e-36 132
MsG0880042006.01.T01 MTR_7g016090 33.468 248 143 7 46 282 22 258 1.10e-35 131
MsG0880042006.01.T01 MTR_7g016090 33.468 248 143 7 46 282 24 260 1.14e-35 131
MsG0880042006.01.T01 MTR_8g075830 33.761 234 142 7 54 279 33 261 1.30e-35 131
MsG0880042006.01.T01 MTR_1g033810 33.040 227 145 4 60 282 47 270 1.73e-35 131
MsG0880042006.01.T01 MTR_1g034140 33.610 241 133 7 60 282 27 258 2.63e-35 130
MsG0880042006.01.T01 MTR_5g055820 30.634 284 169 10 27 296 12 281 2.78e-35 130
MsG0880042006.01.T01 MTR_4g087110 31.429 245 142 5 60 282 26 266 3.11e-35 130
MsG0880042006.01.T01 MTR_5g048550 30.605 281 172 7 27 296 12 280 3.74e-35 130
MsG0880042006.01.T01 MTR_2g072890 30.072 276 170 8 33 296 23 287 7.12e-35 129
MsG0880042006.01.T01 MTR_2g083030 30.350 257 157 7 48 296 26 268 9.91e-35 128
MsG0880042006.01.T01 MTR_6g015950 33.333 237 142 6 53 282 32 259 1.14e-34 128
MsG0880042006.01.T01 MTR_5g065010 28.788 264 175 6 27 282 3 261 1.46e-34 128
MsG0880042006.01.T01 MTR_5g032880 32.609 230 148 5 60 283 376 604 3.52e-34 131
MsG0880042006.01.T01 MTR_5g032880 34.188 234 137 5 57 283 35 258 1.86e-33 129
MsG0880042006.01.T01 MTR_8g064200 29.492 295 192 7 10 296 5 291 6.93e-34 127
MsG0880042006.01.T01 MTR_8g064200 29.592 294 191 7 11 296 1 286 7.25e-34 127
MsG0880042006.01.T01 MTR_3g045230 34.211 266 157 7 27 282 17 274 8.62e-34 126
MsG0880042006.01.T01 MTR_4g087140 30.258 271 161 7 36 282 1 267 1.07e-33 126
MsG0880042006.01.T01 MTR_2g069070 41.420 169 80 4 7 175 13 162 1.17e-33 122
MsG0880042006.01.T01 MTR_5g048470 29.964 277 181 6 27 296 17 287 1.69e-33 125
MsG0880042006.01.T01 MTR_4g087120 31.020 245 143 5 60 282 26 266 2.03e-33 125
MsG0880042006.01.T01 MTR_5g022020 32.479 234 145 7 54 279 33 261 2.27e-33 125
MsG0880042006.01.T01 MTR_5g055680 30.970 268 155 8 47 296 25 280 2.38e-33 125
MsG0880042006.01.T01 MTR_3g058610 32.618 233 146 6 54 279 33 261 4.30e-33 124
MsG0880042006.01.T01 MTR_4g093840 32.174 230 143 6 60 282 62 285 1.39e-32 124
MsG0880042006.01.T01 MTR_7g063730 31.765 255 158 7 38 283 39 286 1.85e-32 123
MsG0880042006.01.T01 MTR_5g011250 30.147 272 170 6 28 282 8 276 1.90e-32 123
MsG0880042006.01.T01 MTR_5g005570 31.858 226 146 4 60 283 37 256 5.11e-32 121
MsG0880042006.01.T01 MTR_2g072910 31.646 237 141 6 60 285 51 277 5.22e-32 120
MsG0880042006.01.T01 MTR_7g102720 33.051 236 140 5 54 282 31 255 1.06e-31 120
MsG0880042006.01.T01 MTR_2g072910 31.452 248 147 7 60 296 51 286 1.31e-31 120
MsG0880042006.01.T01 MTR_7g062570 29.924 264 169 7 28 282 20 276 1.40e-31 120
MsG0880042006.01.T01 MTR_1g081840 31.600 250 154 5 47 283 40 285 2.08e-31 120
MsG0880042006.01.T01 MTR_7g062580 29.259 270 165 9 27 282 19 276 8.74e-31 119
MsG0880042006.01.T01 MTR_7g045650 29.889 271 162 10 27 282 24 281 2.06e-30 117
MsG0880042006.01.T01 MTR_5g059140 31.466 232 143 6 60 282 42 266 2.33e-30 117
MsG0880042006.01.T01 MTR_5g059130 30.000 230 147 5 60 282 44 266 2.43e-30 117
MsG0880042006.01.T01 MTR_2g083000 31.092 238 156 6 60 296 33 263 4.91e-30 116
MsG0880042006.01.T01 MTR_3g043900 33.088 272 151 11 27 282 17 273 5.90e-30 116
MsG0880042006.01.T01 MTR_2g102570 31.136 273 160 9 36 294 25 283 7.10e-30 116
MsG0880042006.01.T01 MTR_4g074130 29.719 249 156 6 46 283 21 261 7.71e-30 115
MsG0880042006.01.T01 MTR_7g016080 31.799 239 147 6 46 275 22 253 9.17e-30 115
MsG0880042006.01.T01 MTR_3g072820 30.568 229 147 4 60 282 42 264 2.17e-29 114
MsG0880042006.01.T01 MTR_6g464620 31.349 252 153 5 47 283 50 296 2.18e-29 115
MsG0880042006.01.T01 MTR_1g102070 31.621 253 151 4 47 283 45 291 2.37e-29 115
MsG0880042006.01.T01 MTR_3g117420 29.825 228 152 5 60 282 52 276 4.71e-29 114
MsG0880042006.01.T01 MTR_4g116010 30.568 229 145 6 60 282 50 270 4.98e-29 114
MsG0880042006.01.T01 MTR_3g088565 29.614 233 144 9 59 282 2 223 2.94e-28 110
MsG0880042006.01.T01 MTR_3g464530 28.455 246 153 7 57 293 31 262 4.18e-28 110
MsG0880042006.01.T01 MTR_2g025120 26.496 234 150 7 61 285 5 225 4.32e-28 108
MsG0880042006.01.T01 MTR_7g062560 29.600 250 156 6 39 282 38 273 5.67e-28 111
MsG0880042006.01.T01 MTR_3g464530 28.390 236 146 7 57 283 31 252 9.32e-28 108
MsG0880042006.01.T01 MTR_2g025120 26.724 232 148 7 61 283 5 223 2.16e-27 108
MsG0880042006.01.T01 MTR_3g096500 31.356 236 145 6 61 283 67 298 2.32e-27 110
MsG0880042006.01.T01 MTR_7g062600 28.947 266 170 9 28 282 16 273 6.41e-27 108
MsG0880042006.01.T01 MTR_5g085330 28.017 232 145 7 61 283 6 224 1.04e-26 107
MsG0880042006.01.T01 MTR_3g083370 27.273 231 150 8 60 283 4 223 1.11e-26 104
MsG0880042006.01.T01 MTR_3g040410 30.705 241 133 9 59 283 5 227 2.09e-26 106
MsG0880042006.01.T01 MTR_7g081710 27.273 264 175 8 30 283 16 272 2.26e-26 106
MsG0880042006.01.T01 MTR_3g083370 27.391 230 149 8 60 282 4 222 3.74e-26 105
MsG0880042006.01.T01 MTR_7g062550 27.985 268 171 7 27 282 24 281 3.80e-26 106
MsG0880042006.01.T01 MTR_8g074050 29.258 229 152 6 60 282 52 276 4.70e-26 105
MsG0880042006.01.T01 MTR_3g026150 30.000 240 149 8 53 283 53 282 5.37e-26 104
MsG0880042006.01.T01 MTR_1g048940 31.048 248 153 11 39 279 30 266 6.55e-26 105
MsG0880042006.01.T01 MTR_8g074070 28.947 228 154 5 60 282 52 276 1.10e-25 104
MsG0880042006.01.T01 MTR_3g026150 30.000 240 149 8 53 283 53 282 1.32e-25 104
MsG0880042006.01.T01 MTR_8g033380 30.901 233 151 3 60 283 54 285 2.27e-25 104
MsG0880042006.01.T01 MTR_4g087130 28.794 257 134 6 60 283 26 266 4.54e-25 103
MsG0880042006.01.T01 MTR_1g011580 26.891 238 158 6 50 282 53 279 1.54e-24 101
MsG0880042006.01.T01 MTR_1g070085 30.939 181 122 2 105 282 1 181 2.24e-24 99.8
MsG0880042006.01.T01 MTR_1g070100 31.792 173 115 2 113 282 5 177 2.50e-24 99.4
MsG0880042006.01.T01 MTR_3g088745 29.317 249 161 5 47 283 23 268 4.49e-24 100
MsG0880042006.01.T01 MTR_3g117485 28.261 230 156 6 60 282 49 276 9.41e-24 99.8
MsG0880042006.01.T01 MTR_2g437380 26.160 237 153 7 60 283 50 277 1.48e-23 99.4
MsG0880042006.01.T01 MTR_8g074070 28.000 225 141 5 60 282 52 257 1.26e-22 96.3
MsG0880042006.01.T01 MTR_8g093930 26.667 270 179 5 29 283 12 277 1.76e-22 96.3
MsG0880042006.01.T01 MTR_6g092620 27.236 246 155 9 59 294 2 233 3.21e-22 94.4
MsG0880042006.01.T01 MTR_1g032240 43.478 115 65 0 162 276 3 117 3.68e-22 91.7
MsG0880042006.01.T01 MTR_0056s0160 35.526 152 92 3 149 296 16 165 1.28e-21 91.7
MsG0880042006.01.T01 MTR_3g072810 28.731 268 168 7 28 283 6 262 1.71e-21 92.8
MsG0880042006.01.T01 MTR_0009s0050 33.750 160 96 5 143 296 27 182 2.45e-20 88.6
MsG0880042006.01.T01 MTR_0009s0050 33.750 160 96 5 143 296 27 182 2.67e-20 88.6
MsG0880042006.01.T01 MTR_5g025060 26.522 230 131 7 56 283 2 195 6.79e-20 87.8
MsG0880042006.01.T01 MTR_2g019370 28.627 255 127 10 58 283 26 254 4.93e-19 86.3
MsG0880042006.01.T01 MTR_8g030880 29.508 244 143 8 57 283 2 233 4.62e-18 83.2
MsG0880042006.01.T01 MTR_5g025090 27.313 227 149 7 59 282 4 217 5.15e-18 82.8
MsG0880042006.01.T01 MTR_3g117485 28.426 197 132 6 93 282 10 204 5.60e-18 82.4
MsG0880042006.01.T01 MTR_0009s0050 39.423 104 56 4 196 296 1 100 1.06e-17 79.3
MsG0880042006.01.T01 MTR_8g093980 24.419 258 175 7 39 283 38 288 4.81e-17 80.9
MsG0880042006.01.T01 MTR_5g027230 27.273 242 138 10 56 283 2 219 6.79e-17 79.7
MsG0880042006.01.T01 MTR_4g123020 25.106 235 157 6 57 282 17 241 1.69e-16 79.0
MsG0880042006.01.T01 MTR_2g070870 25.714 245 150 8 52 282 20 246 2.71e-16 78.2
MsG0880042006.01.T01 MTR_2g068850 29.000 200 115 8 27 204 21 215 3.33e-16 76.3
MsG0880042006.01.T01 MTR_7g077670 29.167 216 124 7 85 283 30 233 1.83e-15 75.9
MsG0880042006.01.T01 MTR_8g102600 24.583 240 158 7 65 282 12 250 1.00e-14 73.9
MsG0880042006.01.T01 MTR_6g088665 26.000 250 144 7 65 282 21 261 1.55e-14 73.2
MsG0880042006.01.T01 MTR_4g115990 26.222 225 143 8 60 282 46 249 1.79e-14 73.2
MsG0880042006.01.T01 MTR_3g026150 27.568 185 119 6 108 283 1 179 2.05e-14 72.0
MsG0880042006.01.T01 MTR_7g084360 44.595 74 40 1 173 245 7 80 2.42e-14 68.9
MsG0880042006.01.T01 MTR_6g088665 25.896 251 144 7 65 282 21 262 2.53e-14 72.8
MsG0880042006.01.T01 MTR_1g032230 32.836 134 63 2 19 148 22 132 5.34e-14 70.9
MsG0880042006.01.T01 MTR_1g070110 27.027 185 100 4 102 282 1 154 6.35e-14 70.1
MsG0880042006.01.T01 MTR_0009s0400 47.619 63 32 1 221 282 2 64 9.24e-14 67.8
MsG0880042006.01.T01 MTR_0009s0410 28.667 150 98 4 27 173 11 154 6.81e-12 63.2
MsG0880042006.01.T01 MTR_4g132770 40.323 62 36 1 223 283 32 93 1.48e-11 62.0
MsG0880042006.01.T01 MTR_1g011600 23.830 235 154 7 64 283 17 241 6.72e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042006.01.T01 AT5G59540 56.777 273 110 5 17 283 14 284 5.00e-116 336
MsG0880042006.01.T01 AT5G59540 56.985 272 109 5 17 282 14 283 1.34e-115 338
MsG0880042006.01.T01 AT1G06640 53.795 303 126 5 4 296 1 299 2.69e-114 333
MsG0880042006.01.T01 AT1G06650 56.000 275 114 2 14 282 12 285 3.15e-114 332
MsG0880042006.01.T01 AT5G43440 53.430 277 121 2 14 284 10 284 8.01e-114 330
MsG0880042006.01.T01 AT1G06650 56.000 275 114 2 14 282 12 285 1.07e-113 333
MsG0880042006.01.T01 AT1G06620 56.877 269 111 3 19 284 18 284 1.90e-113 329
MsG0880042006.01.T01 AT1G06620 56.929 267 110 3 19 282 18 282 7.85e-112 328
MsG0880042006.01.T01 AT1G04350 54.579 273 114 4 15 282 9 276 8.95e-112 328
MsG0880042006.01.T01 AT5G43440 53.091 275 121 2 14 282 10 282 1.30e-111 327
MsG0880042006.01.T01 AT5G59530 56.934 274 111 7 14 282 10 281 3.57e-111 326
MsG0880042006.01.T01 AT1G06640 55.017 289 116 5 4 282 1 285 3.56e-110 324
MsG0880042006.01.T01 AT1G06640 54.704 287 116 5 4 280 1 283 1.78e-109 319
MsG0880042006.01.T01 AT1G06645 54.448 281 115 4 9 282 21 295 1.99e-108 320
MsG0880042006.01.T01 AT2G30840 53.623 276 122 3 14 284 7 281 4.07e-108 316
MsG0880042006.01.T01 AT2G30840 53.285 274 122 3 14 282 7 279 1.29e-106 314
MsG0880042006.01.T01 AT2G30840 53.285 274 122 3 14 282 7 279 1.58e-106 314
MsG0880042006.01.T01 AT2G30830 54.074 270 122 2 14 282 7 275 2.08e-106 314
MsG0880042006.01.T01 AT5G43450 50.903 277 125 4 14 284 10 281 9.38e-104 305
MsG0880042006.01.T01 AT1G03410 51.273 275 126 4 14 282 6 278 3.61e-103 306
MsG0880042006.01.T01 AT1G03410 51.273 275 126 4 14 282 43 315 1.21e-102 306
MsG0880042006.01.T01 AT5G43450 50.545 275 125 4 14 282 10 279 9.44e-102 302
MsG0880042006.01.T01 AT1G04380 49.822 281 118 6 14 289 8 270 1.88e-100 296
MsG0880042006.01.T01 AT2G25450 52.030 271 126 3 14 282 7 275 8.28e-100 297
MsG0880042006.01.T01 AT1G04380 50.549 273 113 5 14 282 8 262 1.84e-98 293
MsG0880042006.01.T01 AT3G61400 47.917 288 140 5 4 282 1 287 1.66e-96 286
MsG0880042006.01.T01 AT3G61400 47.917 288 140 5 4 282 1 287 7.58e-96 287
MsG0880042006.01.T01 AT1G03400 49.084 273 125 3 14 282 6 268 1.40e-93 281
MsG0880042006.01.T01 AT1G03400 49.084 273 125 3 14 282 6 268 6.21e-93 280
MsG0880042006.01.T01 AT4G10500 32.618 233 152 2 52 282 36 265 2.66e-46 159
MsG0880042006.01.T01 AT2G38240 33.101 287 173 7 21 296 5 283 4.06e-44 154
MsG0880042006.01.T01 AT3G13610 34.091 264 158 7 27 282 26 281 5.74e-43 151
MsG0880042006.01.T01 AT3G12900 35.907 259 160 5 27 282 21 276 8.46e-43 150
MsG0880042006.01.T01 AT1G55290 33.333 264 161 6 27 282 25 281 3.24e-42 149
MsG0880042006.01.T01 AT4G10490 30.932 236 158 2 49 282 31 263 1.10e-41 147
MsG0880042006.01.T01 AT5G05600 30.851 282 183 6 11 282 10 289 2.81e-41 145
MsG0880042006.01.T01 AT5G24530 33.193 238 148 4 60 294 38 267 5.21e-41 145
MsG0880042006.01.T01 AT2G36690 32.601 273 162 8 25 282 18 283 7.53e-41 145
MsG0880042006.01.T01 AT2G36690 32.601 273 162 8 25 282 18 283 7.53e-41 145
MsG0880042006.01.T01 AT5G05600 30.303 297 191 8 11 296 10 301 1.06e-40 145
MsG0880042006.01.T01 AT1G17020 34.553 246 138 7 60 292 53 288 1.71e-39 142
MsG0880042006.01.T01 AT3G55970 31.560 282 178 7 21 288 7 287 1.21e-38 138
MsG0880042006.01.T01 AT3G55970 31.379 290 182 8 21 296 7 293 5.50e-38 138
MsG0880042006.01.T01 AT3G11180 29.966 297 186 8 1 282 29 318 3.49e-37 137
MsG0880042006.01.T01 AT3G11180 29.966 297 186 8 1 282 29 318 4.12e-37 136
MsG0880042006.01.T01 AT4G25300 33.469 245 145 6 58 292 50 286 3.62e-36 133
MsG0880042006.01.T01 AT4G25310 34.978 223 126 7 80 292 70 283 6.87e-36 132
MsG0880042006.01.T01 AT4G22880 30.258 271 172 6 28 282 7 276 2.11e-35 131
MsG0880042006.01.T01 AT4G22880 30.258 271 172 6 28 282 7 276 2.11e-35 131
MsG0880042006.01.T01 AT4G22880 30.258 271 172 6 28 282 7 276 2.11e-35 131
MsG0880042006.01.T01 AT3G19010 31.174 247 147 5 55 283 23 264 1.36e-34 127
MsG0880042006.01.T01 AT3G19010 31.301 246 146 5 55 282 23 263 1.80e-34 128
MsG0880042006.01.T01 AT3G19010 31.301 246 146 5 55 282 23 263 1.80e-34 128
MsG0880042006.01.T01 AT3G19000 30.072 276 165 8 30 284 2 270 2.26e-34 126
MsG0880042006.01.T01 AT4G21200 30.303 231 142 6 60 283 42 260 4.40e-34 127
MsG0880042006.01.T01 AT1G78550 33.333 252 153 8 40 282 31 276 4.43e-34 127
MsG0880042006.01.T01 AT3G19000 30.292 274 163 8 30 282 2 268 1.46e-33 126
MsG0880042006.01.T01 AT4G16330 27.368 285 179 8 4 279 20 285 1.12e-32 124
MsG0880042006.01.T01 AT3G21420 29.562 274 167 6 28 283 17 282 3.42e-32 122
MsG0880042006.01.T01 AT3G51240 31.907 257 158 7 34 279 10 260 4.56e-32 122
MsG0880042006.01.T01 AT1G17010 32.197 264 162 8 40 292 31 288 4.85e-32 122
MsG0880042006.01.T01 AT5G08640 31.579 228 142 6 59 279 42 262 1.10e-31 120
MsG0880042006.01.T01 AT5G08640 31.579 228 142 6 59 279 42 262 1.10e-31 120
MsG0880042006.01.T01 AT4G25420 30.620 258 167 3 39 286 40 295 6.75e-31 117
MsG0880042006.01.T01 AT4G25420 30.980 255 164 3 39 283 40 292 1.28e-30 118
MsG0880042006.01.T01 AT1G60980 29.478 268 160 5 42 283 28 292 1.14e-29 116
MsG0880042006.01.T01 AT1G77330 30.962 239 135 8 59 282 2 225 1.20e-29 114
MsG0880042006.01.T01 AT1G15550 29.958 237 144 7 56 282 53 277 1.23e-29 115
MsG0880042006.01.T01 AT2G44800 26.962 293 178 7 21 294 9 284 4.40e-29 114
MsG0880042006.01.T01 AT3G19010 29.915 234 135 7 55 282 23 233 9.57e-28 109
MsG0880042006.01.T01 AT1G12010 28.448 232 144 6 60 282 7 225 4.63e-27 108
MsG0880042006.01.T01 AT1G05010 28.755 233 144 7 60 283 4 223 6.17e-27 107
MsG0880042006.01.T01 AT3G60290 28.980 245 152 6 60 294 52 284 9.75e-27 107
MsG0880042006.01.T01 AT5G63580 29.289 239 145 6 57 284 16 241 1.16e-26 105
MsG0880042006.01.T01 AT5G07200 27.402 281 190 4 15 283 13 291 1.43e-26 107
MsG0880042006.01.T01 AT1G80330 28.065 310 152 12 34 296 14 299 2.34e-26 106
MsG0880042006.01.T01 AT1G50960 28.063 253 170 5 51 296 25 272 2.81e-26 106
MsG0880042006.01.T01 AT1G78550 32.828 198 122 6 92 282 5 198 3.33e-26 104
MsG0880042006.01.T01 AT1G62380 28.017 232 145 7 60 282 7 225 3.37e-26 105
MsG0880042006.01.T01 AT5G63580 29.487 234 141 6 57 279 16 236 3.91e-26 103
MsG0880042006.01.T01 AT5G20400 28.409 264 178 6 28 282 9 270 4.47e-26 105
MsG0880042006.01.T01 AT5G51810 31.513 238 139 6 60 283 63 290 6.20e-26 105
MsG0880042006.01.T01 AT5G51810 31.624 234 136 6 60 279 63 286 7.60e-26 104
MsG0880042006.01.T01 AT5G12270 28.358 268 175 7 25 282 18 278 1.17e-25 105
MsG0880042006.01.T01 AT5G63590 33.054 239 141 8 51 279 4 233 1.28e-25 103
MsG0880042006.01.T01 AT1G44090 30.453 243 139 5 60 283 63 294 1.01e-24 102
MsG0880042006.01.T01 AT1G80340 28.571 259 161 8 36 282 24 270 4.33e-24 100
MsG0880042006.01.T01 AT5G63600 28.509 228 145 5 60 281 33 248 4.76e-24 100
MsG0880042006.01.T01 AT5G63600 28.509 228 145 5 60 281 33 248 5.85e-24 99.8
MsG0880042006.01.T01 AT5G63595 28.992 238 119 8 56 279 21 222 7.30e-24 98.6
MsG0880042006.01.T01 AT5G07480 27.132 258 173 7 47 294 31 283 2.24e-23 98.6
MsG0880042006.01.T01 AT5G54000 27.715 267 179 7 28 283 9 272 6.16e-23 97.4
MsG0880042006.01.T01 AT1G49390 26.515 264 183 7 28 282 9 270 1.05e-22 96.7
MsG0880042006.01.T01 AT5G20550 28.195 266 177 9 28 282 9 271 1.89e-22 95.9
MsG0880042006.01.T01 AT4G16330 32.836 134 87 1 149 279 46 179 1.26e-21 92.0
MsG0880042006.01.T01 AT3G47190 25.000 240 150 7 60 283 32 257 5.87e-21 91.7
MsG0880042006.01.T01 AT4G25310 28.829 222 113 7 80 292 70 255 6.33e-21 91.3
MsG0880042006.01.T01 AT3G51240 40.196 102 59 1 180 279 75 176 8.00e-21 90.1
MsG0880042006.01.T01 AT5G58660 25.581 258 141 10 60 283 34 274 8.93e-21 91.3
MsG0880042006.01.T01 AT5G58660 25.292 257 141 10 60 282 34 273 1.59e-20 89.4
MsG0880042006.01.T01 AT2G19590 27.468 233 144 9 60 282 11 228 8.08e-20 88.2
MsG0880042006.01.T01 AT4G21690 29.218 243 143 10 55 280 42 272 1.25e-19 88.2
MsG0880042006.01.T01 AT1G14130 28.085 235 135 7 59 280 8 221 2.05e-18 84.0
MsG0880042006.01.T01 AT4G25300 38.333 120 72 2 175 292 73 192 2.33e-18 83.2
MsG0880042006.01.T01 AT4G23340 30.769 208 129 6 86 283 30 232 2.49e-18 84.0
MsG0880042006.01.T01 AT5G54000 28.497 193 132 4 96 283 1 192 7.45e-18 82.0
MsG0880042006.01.T01 AT1G14120 28.033 239 136 9 56 280 4 220 3.21e-17 80.9
MsG0880042006.01.T01 AT1G14120 28.033 239 136 9 56 280 4 220 3.21e-17 80.9
MsG0880042006.01.T01 AT1G14120 28.033 239 136 9 56 280 4 220 3.21e-17 80.9
MsG0880042006.01.T01 AT2G34555 26.667 240 144 8 59 283 26 248 1.05e-15 76.6
MsG0880042006.01.T01 AT1G30040 26.255 259 154 10 56 294 27 268 2.10e-15 75.1
MsG0880042006.01.T01 AT5G43935 25.641 234 131 8 60 281 19 221 2.40e-15 75.1
MsG0880042006.01.T01 AT1G49390 26.042 192 136 4 96 282 1 191 2.93e-15 74.7
MsG0880042006.01.T01 AT5G51310 27.236 246 140 8 60 283 5 233 4.80e-15 74.7
MsG0880042006.01.T01 AT1G78440 26.639 244 145 9 58 283 16 243 7.77e-15 74.3
MsG0880042006.01.T01 AT1G30040 25.926 243 147 9 56 282 27 252 8.00e-15 74.3
MsG0880042006.01.T01 AT2G06960 48.333 60 26 1 217 276 27 81 6.52e-14 68.2
MsG0880042006.01.T01 AT2G19590 26.500 200 125 8 93 282 26 213 8.34e-13 67.8
MsG0880042006.01.T01 AT4G23340 36.842 114 64 4 178 283 1 114 9.16e-12 63.5
MsG0880042006.01.T01 AT4G16770 25.941 239 144 11 55 271 17 244 6.47e-11 62.0

Find 67 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTTGCGTTCATTGAATT+TGG 0.121575 8:-2371848 None:intergenic
ACATTACTAATAATAGTTTA+TGG 0.210216 8:-2373479 None:intergenic
GTTGTTCCCACAGTCAATTC+TGG 0.240799 8:-2373286 None:intergenic
AAGTTCTTTATGAAGATAAA+TGG 0.252533 8:+2373368 MsG0880042006.01.T01:CDS
ACCAAACCATTTGAAAGATA+TGG 0.258398 8:+2373210 MsG0880042006.01.T01:CDS
TCTTCTGGTTTGAGAGTATC+AGG 0.295106 8:-2372294 None:intergenic
GGAAAACACATGATGAATCT+AGG 0.331310 8:+2373145 MsG0880042006.01.T01:CDS
CTCAATTGGAAGGATAGTTT+TGG 0.336725 8:+2372255 MsG0880042006.01.T01:CDS
TCCATATCTTTCAAATGGTT+TGG 0.339562 8:-2373211 None:intergenic
CATACTACAGGAAACTCTTC+TGG 0.350265 8:-2372309 None:intergenic
GAATTGTTGTCAGAAGCTTT+AGG 0.369658 8:+2373181 MsG0880042006.01.T01:CDS
GTTAGGTTTGGTTGTATCAA+TGG 0.379115 8:-2371818 None:intergenic
GGTTGATGATGGAATAATTC+AGG 0.384299 8:-2371928 None:intergenic
CCCACAGTCAATTCTGGTTC+AGG 0.384551 8:-2373280 None:intergenic
AATAACATTGCTTGTGTTGT+TGG 0.393117 8:-2371968 None:intergenic
TTGAATTTGGAATCAAGGTT+AGG 0.400503 8:-2371835 None:intergenic
CGTATTTGTCAGGTTGATGA+TGG 0.404579 8:-2371939 None:intergenic
CACAATCCATATCTTTCAAA+TGG 0.407796 8:-2373216 None:intergenic
TCAAGGAAGCATGTCAAACT+TGG 0.410134 8:+2372058 MsG0880042006.01.T01:CDS
TTTGGAATCAAGGTTAGGTT+TGG 0.416343 8:-2371830 None:intergenic
ATAGCTCTCCAGCACTCAAT+TGG 0.417623 8:+2372241 MsG0880042006.01.T01:CDS
AGAGATATACTGCTACAATA+TGG 0.421575 8:+2373124 MsG0880042006.01.T01:intron
TTGGCTTTCTCGTATTTGTC+AGG 0.425112 8:-2371949 None:intergenic
ATTTATCTTCATAAAGAACT+TGG 0.428540 8:-2373366 None:intergenic
GTTCATTGAATTTGGAATCA+AGG 0.429027 8:-2371840 None:intergenic
GTGCTTCTTCAAGACCATAT+TGG 0.430065 8:+2373337 MsG0880042006.01.T01:CDS
ACTATCCCTTGGTGAATACT+TGG 0.435000 8:-2372027 None:intergenic
GAACTTGGAGGCCACCAATA+TGG 0.439098 8:-2373351 None:intergenic
GTTCTTGAGGAGTTGAAAGA+TGG 0.453205 8:+2372120 MsG0880042006.01.T01:CDS
TGACTTTCTCAACTATCCCT+TGG 0.453903 8:-2372038 None:intergenic
CAGGACAAGGAGGATAATAA+TGG 0.457753 8:-2373261 None:intergenic
AGTTGAAAGATGGGGTGAAA+AGG 0.500490 8:+2372130 MsG0880042006.01.T01:CDS
GAAAACACATGATGAATCTA+GGG 0.500724 8:+2373146 MsG0880042006.01.T01:CDS
CTATCCTTCCAATTGAGTGC+TGG 0.501996 8:-2372249 None:intergenic
TATCTTCATAAAGAACTTGG+AGG 0.504240 8:-2373363 None:intergenic
AAAGATATGGATTGTGCTCA+AGG 0.508149 8:+2373223 MsG0880042006.01.T01:CDS
AACTCCTCAAGAACACTCAA+AGG 0.516232 8:-2372111 None:intergenic
CAAGGAAGCATGTCAAACTT+GGG 0.516690 8:+2372059 MsG0880042006.01.T01:CDS
ACTCCTCAAGAACACTCAAA+GGG 0.527377 8:-2372110 None:intergenic
GTCAATTCTGGTTCAGGACA+AGG 0.531294 8:-2373274 None:intergenic
CTTTATTATCAATATCATCA+AGG 0.531884 8:-2372002 None:intergenic
ACTATGAGAGCTCCAGGTAC+AGG 0.532297 8:-2373403 None:intergenic
GAAACAAAAGCAGGTGTGAA+AGG 0.532657 8:+2371877 MsG0880042006.01.T01:CDS
GGTGTGAAAGGACTTGTTGA+TGG 0.537095 8:+2371889 MsG0880042006.01.T01:CDS
ACATTAACTATGAGAGCTCC+AGG 0.542016 8:-2373409 None:intergenic
AAGAGTTTCCTGTAGTATGC+AGG 0.544361 8:+2372313 MsG0880042006.01.T01:CDS
TAAACATACCTGCATACTAC+AGG 0.544570 8:-2372321 None:intergenic
AATCCCTTTGAGTGTTCTTG+AGG 0.545874 8:+2372107 MsG0880042006.01.T01:CDS
GGAGCTCTCATAGTTAATGT+TGG 0.553848 8:+2373412 MsG0880042006.01.T01:CDS
TTCTTGAGGAGTTGAAAGAT+GGG 0.560902 8:+2372121 MsG0880042006.01.T01:CDS
CTCTCCAGCACTCAATTGGA+AGG 0.572953 8:+2372245 MsG0880042006.01.T01:CDS
CTTCTTCAAGACCATATTGG+TGG 0.579077 8:+2373340 MsG0880042006.01.T01:CDS
ATTGATATAACACCTGTACC+TGG 0.585161 8:+2373391 MsG0880042006.01.T01:CDS
ATATCATCAAGGTCTATGAC+AGG 0.589876 8:-2371991 None:intergenic
GCATTTGATGAAACAAAAGC+AGG 0.595830 8:+2371868 MsG0880042006.01.T01:CDS
AGGGATAGTTGAGAAAGTCA+AGG 0.633105 8:+2372041 MsG0880042006.01.T01:CDS
AAGGAAGCATGTCAAACTTG+GGG 0.635491 8:+2372060 MsG0880042006.01.T01:CDS
TCTGGTTTGAGAGTATCAGG+TGG 0.638557 8:-2372291 None:intergenic
AAGATCCAAGTATTCACCAA+GGG 0.638816 8:+2372022 MsG0880042006.01.T01:CDS
AAGATATGGATTGTGCTCAA+GGG 0.643268 8:+2373224 MsG0880042006.01.T01:CDS
AAAGATCCAAGTATTCACCA+AGG 0.675646 8:+2372021 MsG0880042006.01.T01:CDS
TCCTGAACCAGAATTGACTG+TGG 0.682984 8:+2373279 MsG0880042006.01.T01:CDS
TCTTGAGGAGTTGAAAGATG+GGG 0.685762 8:+2372122 MsG0880042006.01.T01:CDS
CCTGAACCAGAATTGACTGT+GGG 0.714206 8:+2373280 MsG0880042006.01.T01:CDS
GTGAAAGGACTTGTTGATGG+AGG 0.720260 8:+2371892 MsG0880042006.01.T01:CDS
AATTCTGGTTCAGGACAAGG+AGG 0.722763 8:-2373271 None:intergenic
GGTCTTGAAGAAGCACTGTG+AGG 0.730188 8:-2373330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTAGTTTATTTATAATT+CGG + Chr8:2372497-2372516 MsG0880042006.01.T01:intron 10.0%
!!! GATTAATATATTTTAACATA+AGG - Chr8:2372953-2372972 None:intergenic 10.0%
!! TCACATATAATAGTATAAAA+TGG + Chr8:2373056-2373075 MsG0880042006.01.T01:intron 15.0%
!! TCTGTTAAATAATATGTAAT+GGG + Chr8:2372448-2372467 MsG0880042006.01.T01:intron 15.0%
!! AAGTTCTTTATGAAGATAAA+TGG + Chr8:2373368-2373387 MsG0880042006.01.T01:CDS 20.0%
!! AGATTAGAGATATTAGAAAA+AGG - Chr8:2372876-2372895 None:intergenic 20.0%
!! ATTTATCTTCATAAAGAACT+TGG - Chr8:2373369-2373388 None:intergenic 20.0%
!! CTTTATTATCAATATCATCA+AGG - Chr8:2372005-2372024 None:intergenic 20.0%
!! GTCTGTTAAATAATATGTAA+TGG + Chr8:2372447-2372466 MsG0880042006.01.T01:intron 20.0%
!! TTTATTTGCTCATTGAAATT+TGG + Chr8:2372359-2372378 MsG0880042006.01.T01:intron 20.0%
!!! AAATTTAGCCACTTTTTTTT+TGG + Chr8:2372758-2372777 MsG0880042006.01.T01:intron 20.0%
! AGATTAGACCAAAAAAAAAG+TGG - Chr8:2372769-2372788 None:intergenic 25.0%
! TAAATAAACTAAACTACCCT+TGG - Chr8:2372492-2372511 None:intergenic 25.0%
! TATCTCTAGCAAATAAGAAA+TGG - Chr8:2372997-2373016 None:intergenic 25.0%
!! CTACAATTTTTCTCTCTAAT+TGG + Chr8:2373087-2373106 MsG0880042006.01.T01:intron 25.0%
!! TGTATGAAATGTGTTTTCAT+TGG + Chr8:2372910-2372929 MsG0880042006.01.T01:intron 25.0%
!!! TTTTTTCAAGTTGTCAATCA+TGG + Chr8:2372084-2372103 MsG0880042006.01.T01:CDS 25.0%
AATAACATTGCTTGTGTTGT+TGG - Chr8:2371971-2371990 None:intergenic 30.0%
ACCAAACCATTTGAAAGATA+TGG + Chr8:2373210-2373229 MsG0880042006.01.T01:CDS 30.0%
AGAAGAGAACAAAAGAACAA+AGG - Chr8:2372579-2372598 None:intergenic 30.0%
AGAGATATACTGCTACAATA+TGG + Chr8:2373124-2373143 MsG0880042006.01.T01:intron 30.0%
AGCTTGAGTATGACTTAAAT+AGG - Chr8:2372850-2372869 None:intergenic 30.0%
CACAATCCATATCTTTCAAA+TGG - Chr8:2373219-2373238 None:intergenic 30.0%
GAAAACACATGATGAATCTA+GGG + Chr8:2373146-2373165 MsG0880042006.01.T01:CDS 30.0%
TATCTTCATAAAGAACTTGG+AGG - Chr8:2373366-2373385 None:intergenic 30.0%
TCCATATCTTTCAAATGGTT+TGG - Chr8:2373214-2373233 None:intergenic 30.0%
TTGGTCTAATCTAAGTAACA+AGG + Chr8:2372777-2372796 MsG0880042006.01.T01:intron 30.0%
! ATACATCTCTTTTACAGGAA+AGG + Chr8:2373014-2373033 MsG0880042006.01.T01:intron 30.0%
! GTTCATTGAATTTGGAATCA+AGG - Chr8:2371843-2371862 None:intergenic 30.0%
! TAGAGATACATCTCTTTTAC+AGG + Chr8:2373009-2373028 MsG0880042006.01.T01:intron 30.0%
! TTGAATTTGGAATCAAGGTT+AGG - Chr8:2371838-2371857 None:intergenic 30.0%
!! ATGGGCCTTTTGTTATAATT+CGG + Chr8:2372466-2372485 MsG0880042006.01.T01:intron 30.0%
!! TTTTGTTATAATTCGGCCAA+GGG + Chr8:2372473-2372492 MsG0880042006.01.T01:intron 30.0%
AAAGATCCAAGTATTCACCA+AGG + Chr8:2372021-2372040 MsG0880042006.01.T01:CDS 35.0%
AAGATCCAAGTATTCACCAA+GGG + Chr8:2372022-2372041 MsG0880042006.01.T01:CDS 35.0%
AGTATGACTTAAATAGGCAG+CGG - Chr8:2372844-2372863 None:intergenic 35.0%
ATATCATCAAGGTCTATGAC+AGG - Chr8:2371994-2372013 None:intergenic 35.0%
ATTGATATAACACCTGTACC+TGG + Chr8:2373391-2373410 MsG0880042006.01.T01:CDS 35.0%
CACTTTACAGTATAGAGTAC+TGG - Chr8:2372602-2372621 None:intergenic 35.0%
CTTGGCCGAATTATAACAAA+AGG - Chr8:2372474-2372493 None:intergenic 35.0%
GAATTGTTGTCAGAAGCTTT+AGG + Chr8:2373181-2373200 MsG0880042006.01.T01:CDS 35.0%
GCATTTGATGAAACAAAAGC+AGG + Chr8:2371868-2371887 MsG0880042006.01.T01:CDS 35.0%
GGAAAACACATGATGAATCT+AGG + Chr8:2373145-2373164 MsG0880042006.01.T01:CDS 35.0%
GTTTCGTAGGACTTAAGTTA+AGG + Chr8:2372730-2372749 MsG0880042006.01.T01:intron 35.0%
TAAACATACCTGCATACTAC+AGG - Chr8:2372324-2372343 None:intergenic 35.0%
TGCTTTGCGTTCATTGAATT+TGG - Chr8:2371851-2371870 None:intergenic 35.0%
TTCTTGAGGAGTTGAAAGAT+GGG + Chr8:2372121-2372140 MsG0880042006.01.T01:CDS 35.0%
! AAAGATATGGATTGTGCTCA+AGG + Chr8:2373223-2373242 MsG0880042006.01.T01:CDS 35.0%
! AAGATATGGATTGTGCTCAA+GGG + Chr8:2373224-2373243 MsG0880042006.01.T01:CDS 35.0%
! CTCAATTGGAAGGATAGTTT+TGG + Chr8:2372255-2372274 MsG0880042006.01.T01:CDS 35.0%
! GTAGCACTGAAATTTCAGAT+TGG + Chr8:2372394-2372413 MsG0880042006.01.T01:intron 35.0%
! GTTAGGTTTGGTTGTATCAA+TGG - Chr8:2371821-2371840 None:intergenic 35.0%
! TAATGTTGGAGATCTTTTGC+AGG + Chr8:2373426-2373445 MsG0880042006.01.T01:CDS 35.0%
! TTTGGAATCAAGGTTAGGTT+TGG - Chr8:2371833-2371852 None:intergenic 35.0%
!! CTTTTGTTATAATTCGGCCA+AGG + Chr8:2372472-2372491 MsG0880042006.01.T01:intron 35.0%
!! GGTTGATGATGGAATAATTC+AGG - Chr8:2371931-2371950 None:intergenic 35.0%
!! TCTATACTGTAAAGTGTCGT+CGG + Chr8:2372606-2372625 MsG0880042006.01.T01:intron 35.0%
!!! GGATAGTTTTGGTTGTAACT+TGG + Chr8:2372266-2372285 MsG0880042006.01.T01:CDS 35.0%
AACTCCTCAAGAACACTCAA+AGG - Chr8:2372114-2372133 None:intergenic 40.0%
AAGAGTTTCCTGTAGTATGC+AGG + Chr8:2372313-2372332 MsG0880042006.01.T01:CDS 40.0%
AATCCCTTTGAGTGTTCTTG+AGG + Chr8:2372107-2372126 MsG0880042006.01.T01:CDS 40.0%
ACATTAACTATGAGAGCTCC+AGG - Chr8:2373412-2373431 None:intergenic 40.0%
ACTATCCCTTGGTGAATACT+TGG - Chr8:2372030-2372049 None:intergenic 40.0%
ACTCCTCAAGAACACTCAAA+GGG - Chr8:2372113-2372132 None:intergenic 40.0%
AGGGATAGTTGAGAAAGTCA+AGG + Chr8:2372041-2372060 MsG0880042006.01.T01:CDS 40.0%
AGTTGAAAGATGGGGTGAAA+AGG + Chr8:2372130-2372149 MsG0880042006.01.T01:CDS 40.0%
CAGGACAAGGAGGATAATAA+TGG - Chr8:2373264-2373283 None:intergenic 40.0%
CATACTACAGGAAACTCTTC+TGG - Chr8:2372312-2372331 None:intergenic 40.0%
CTTCTTCAAGACCATATTGG+TGG + Chr8:2373340-2373359 MsG0880042006.01.T01:CDS 40.0%
GAAACAAAAGCAGGTGTGAA+AGG + Chr8:2371877-2371896 MsG0880042006.01.T01:CDS 40.0%
GGAGCTCTCATAGTTAATGT+TGG + Chr8:2373412-2373431 MsG0880042006.01.T01:CDS 40.0%
GTGCTTCTTCAAGACCATAT+TGG + Chr8:2373337-2373356 MsG0880042006.01.T01:CDS 40.0%
GTTCTTGAGGAGTTGAAAGA+TGG + Chr8:2372120-2372139 MsG0880042006.01.T01:CDS 40.0%
TCTTGAGGAGTTGAAAGATG+GGG + Chr8:2372122-2372141 MsG0880042006.01.T01:CDS 40.0%
TGACTTTCTCAACTATCCCT+TGG - Chr8:2372041-2372060 None:intergenic 40.0%
! AAGGAAGCATGTCAAACTTG+GGG + Chr8:2372060-2372079 MsG0880042006.01.T01:CDS 40.0%
! CAAGGAAGCATGTCAAACTT+GGG + Chr8:2372059-2372078 MsG0880042006.01.T01:CDS 40.0%
! TCAAGGAAGCATGTCAAACT+TGG + Chr8:2372058-2372077 MsG0880042006.01.T01:CDS 40.0%
! TTGGCTTTCTCGTATTTGTC+AGG - Chr8:2371952-2371971 None:intergenic 40.0%
!! CGTATTTGTCAGGTTGATGA+TGG - Chr8:2371942-2371961 None:intergenic 40.0%
!! TCTTCTGGTTTGAGAGTATC+AGG - Chr8:2372297-2372316 None:intergenic 40.0%
AAGGACTGAAATTCGCAGCA+AGG + Chr8:2372796-2372815 MsG0880042006.01.T01:intron 45.0%
ACGAAACACTAACGTTGGAG+AGG - Chr8:2372717-2372736 None:intergenic 45.0%
ATAGCTCTCCAGCACTCAAT+TGG + Chr8:2372241-2372260 MsG0880042006.01.T01:CDS 45.0%
CCTGAACCAGAATTGACTGT+GGG + Chr8:2373280-2373299 MsG0880042006.01.T01:CDS 45.0%
CTATCCTTCCAATTGAGTGC+TGG - Chr8:2372252-2372271 None:intergenic 45.0%
CTCCAACGTTAGTGTTTCGT+AGG + Chr8:2372717-2372736 MsG0880042006.01.T01:intron 45.0%
GTCCTACGAAACACTAACGT+TGG - Chr8:2372722-2372741 None:intergenic 45.0%
GTTGTTCCCACAGTCAATTC+TGG - Chr8:2373289-2373308 None:intergenic 45.0%
TCCTGAACCAGAATTGACTG+TGG + Chr8:2373279-2373298 MsG0880042006.01.T01:CDS 45.0%
!! AATTCTGGTTCAGGACAAGG+AGG - Chr8:2373274-2373293 None:intergenic 45.0%
!! GGTGTGAAAGGACTTGTTGA+TGG + Chr8:2371889-2371908 MsG0880042006.01.T01:CDS 45.0%
!! GTCAATTCTGGTTCAGGACA+AGG - Chr8:2373277-2373296 None:intergenic 45.0%
!! GTGAAAGGACTTGTTGATGG+AGG + Chr8:2371892-2371911 MsG0880042006.01.T01:CDS 45.0%
!! TCTGGTTTGAGAGTATCAGG+TGG - Chr8:2372294-2372313 None:intergenic 45.0%
ACTATGAGAGCTCCAGGTAC+AGG - Chr8:2373406-2373425 None:intergenic 50.0%
CTCTCCAGCACTCAATTGGA+AGG + Chr8:2372245-2372264 MsG0880042006.01.T01:CDS 50.0%
GAACTTGGAGGCCACCAATA+TGG - Chr8:2373354-2373373 None:intergenic 50.0%
!! CCCACAGTCAATTCTGGTTC+AGG - Chr8:2373283-2373302 None:intergenic 50.0%
!! GGTCTTGAAGAAGCACTGTG+AGG - Chr8:2373333-2373352 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2371811 2373495 2371811 ID=MsG0880042006.01;Name=MsG0880042006.01
Chr8 mRNA 2371811 2373495 2371811 ID=MsG0880042006.01.T01;Parent=MsG0880042006.01;Name=MsG0880042006.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|2|0|297
Chr8 exon 2371811 2372334 2371811 ID=MsG0880042006.01.T01:exon:1811;Parent=MsG0880042006.01.T01
Chr8 exon 2373126 2373495 2373126 ID=MsG0880042006.01.T01:exon:1812;Parent=MsG0880042006.01.T01
Chr8 CDS 2371811 2372334 2371811 ID=MsG0880042006.01.T01:cds;Parent=MsG0880042006.01.T01
Chr8 CDS 2373126 2373495 2373126 ID=MsG0880042006.01.T01:cds;Parent=MsG0880042006.01.T01
Gene Sequence

>MsG0880042006.01.T01

ATGGGAACCATTGATACAACCAAACCTAACCTTGATTCCAAATTCAATGAACGCAAAGCATTTGATGAAACAAAAGCAGGTGTGAAAGGACTTGTTGATGGAGGACTTAAGAAGATACCTGAATTATTCCATCATCAACCTGACAAATACGAGAAAGCCAACAACACAAGCAATGTTATTCCTGTCATAGACCTTGATGATATTGATAATAAAGATCCAAGTATTCACCAAGGGATAGTTGAGAAAGTCAAGGAAGCATGTCAAACTTGGGGATTTTTTCAAGTTGTCAATCATGGAATCCCTTTGAGTGTTCTTGAGGAGTTGAAAGATGGGGTGAAAAGGTTTTATGAACAAGACACAGAAGTCAAAAAAGATTTTTATACAAGAGATATCAGTAGATCATTTATTTACAATAGCAATGTTGATGTTTATAGCTCTCCAGCACTCAATTGGAAGGATAGTTTTGGTTGTAACTTGGCTCCACCTGATACTCTCAAACCAGAAGAGTTTCCTGTAGTATGCAGAGATATACTGCTACAATATGGAAAACACATGATGAATCTAGGGACTTTATTCTTTGAATTGTTGTCAGAAGCTTTAGGTTTGAAACCAAACCATTTGAAAGATATGGATTGTGCTCAAGGGCTAATTGCTCTTTGCCATTATTATCCTCCTTGTCCTGAACCAGAATTGACTGTGGGAACAACAAAGCATTCTGATAATGATTTCCTCACAGTGCTTCTTCAAGACCATATTGGTGGCCTCCAAGTTCTTTATGAAGATAAATGGATTGATATAACACCTGTACCTGGAGCTCTCATAGTTAATGTTGGAGATCTTTTGCAGGCAAGTTTTTTGCATACTTATGTGTATATTTCCATAAACTATTATTAG

Protein sequence

>MsG0880042006.01.T01

MGTIDTTKPNLDSKFNERKAFDETKAGVKGLVDGGLKKIPELFHHQPDKYEKANNTSNVIPVIDLDDIDNKDPSIHQGIVEKVKEACQTWGFFQVVNHGIPLSVLEELKDGVKRFYEQDTEVKKDFYTRDISRSFIYNSNVDVYSSPALNWKDSFGCNLAPPDTLKPEEFPVVCRDILLQYGKHMMNLGTLFFELLSEALGLKPNHLKDMDCAQGLIALCHYYPPCPEPELTVGTTKHSDNDFLTVLLQDHIGGLQVLYEDKWIDITPVPGALIVNVGDLLQASFLHTYVYISINYY*