AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042001.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042001.01.T01 MTR_8g009170 84.192 291 46 0 18 308 1 291 0.0 512
MsG0880042001.01.T01 MTR_8g009120 84.429 289 33 1 18 306 1 277 0.0 504
MsG0880042001.01.T01 MTR_8g009170 84.752 282 43 0 18 299 1 282 5.39e-180 502
MsG0880042001.01.T01 MTR_8g009110 82.270 282 50 0 18 299 1 282 1.08e-177 496
MsG0880042001.01.T01 MTR_8g009150 83.333 282 27 1 18 299 1 262 1.48e-175 490
MsG0880042001.01.T01 MTR_8g028435 83.688 282 45 1 18 299 1 281 1.62e-174 488
MsG0880042001.01.T01 MTR_8g009160 79.787 282 56 1 18 299 1 281 1.47e-171 481
MsG0880042001.01.T01 MTR_8g008930 78.799 283 58 2 18 299 1 282 3.44e-167 470
MsG0880042001.01.T01 MTR_8g009090 78.723 282 59 1 18 299 1 281 1.54e-166 468
MsG0880042001.01.T01 MTR_4g117880 71.025 283 80 2 18 299 1 282 3.67e-147 419
MsG0880042001.01.T01 MTR_2g069210 65.845 284 91 4 19 299 4 284 1.03e-134 387
MsG0880042001.01.T01 MTR_2g069090 67.279 272 83 4 32 299 20 289 1.15e-129 375
MsG0880042001.01.T01 MTR_2g069190 65.314 271 89 3 32 299 20 288 3.68e-127 369
MsG0880042001.01.T01 MTR_2g069300 62.500 272 96 4 32 299 6 275 6.54e-123 357
MsG0880042001.01.T01 MTR_8g009080 56.314 293 116 4 33 322 47 330 1.17e-117 343
MsG0880042001.01.T01 MTR_8g009080 59.259 270 105 3 33 299 47 314 1.26e-116 343
MsG0880042001.01.T01 MTR_8g009080 58.801 267 105 3 33 296 47 311 5.18e-115 337
MsG0880042001.01.T01 MTR_1g043775 58.719 281 109 6 25 302 1 277 1.46e-110 324
MsG0880042001.01.T01 MTR_1g043810 52.751 309 125 7 32 322 7 312 4.60e-110 323
MsG0880042001.01.T01 MTR_1g043760 57.401 277 112 5 25 299 1 273 1.05e-109 323
MsG0880042001.01.T01 MTR_1g043770 58.582 268 107 4 36 302 11 275 1.05e-108 319
MsG0880042001.01.T01 MTR_1g043775 58.633 278 108 6 25 299 1 274 1.07e-108 321
MsG0880042001.01.T01 MTR_1g043810 57.565 271 109 5 32 299 7 274 1.88e-108 320
MsG0880042001.01.T01 MTR_1g043770 58.491 265 106 4 36 299 11 272 1.85e-107 318
MsG0880042001.01.T01 MTR_8g041620 53.676 272 117 4 34 299 22 290 2.47e-104 311
MsG0880042001.01.T01 MTR_8g041600 52.381 273 121 4 34 300 22 291 9.77e-104 306
MsG0880042001.01.T01 MTR_8g041600 52.574 272 120 4 34 299 22 290 1.79e-102 306
MsG0880042001.01.T01 MTR_0032s0040 51.957 281 116 5 32 299 15 289 1.17e-97 293
MsG0880042001.01.T01 MTR_7g029655 49.818 275 126 3 32 299 15 284 1.89e-97 293
MsG0880042001.01.T01 MTR_2g069010 50.554 271 128 3 33 299 21 289 7.91e-97 291
MsG0880042001.01.T01 MTR_1g093120 49.270 274 127 5 34 299 18 287 5.92e-95 286
MsG0880042001.01.T01 MTR_8g063070 44.147 299 160 5 18 311 3 299 1.48e-93 283
MsG0880042001.01.T01 MTR_1g093140 48.043 281 129 5 32 299 17 293 3.06e-93 282
MsG0880042001.01.T01 MTR_7g056347 47.212 269 138 4 33 299 21 287 4.72e-93 281
MsG0880042001.01.T01 MTR_2g069020 49.815 271 130 3 33 299 19 287 1.40e-92 280
MsG0880042001.01.T01 MTR_2g068950 47.222 288 141 5 18 299 1 283 1.57e-92 280
MsG0880042001.01.T01 MTR_2g069020 49.815 271 130 3 33 299 19 287 4.99e-92 280
MsG0880042001.01.T01 MTR_7g078010 49.265 272 134 3 34 303 22 291 1.37e-91 275
MsG0880042001.01.T01 MTR_8g006930 46.488 299 156 3 15 311 3 299 9.68e-91 276
MsG0880042001.01.T01 MTR_2g068960 46.875 288 142 5 18 299 1 283 2.67e-90 275
MsG0880042001.01.T01 MTR_7g078010 49.627 268 131 3 34 299 22 287 6.18e-90 274
MsG0880042001.01.T01 MTR_1g093110 48.175 274 132 4 34 299 19 290 7.50e-90 273
MsG0880042001.01.T01 MTR_2g069060 50.187 267 115 3 33 299 21 269 1.36e-89 272
MsG0880042001.01.T01 MTR_4g119410 50.000 268 130 4 34 299 22 287 1.31e-88 270
MsG0880042001.01.T01 MTR_2g069060 51.200 250 116 3 56 301 2 249 2.57e-88 265
MsG0880042001.01.T01 MTR_8g062600 45.353 269 143 3 33 299 21 287 6.92e-87 266
MsG0880042001.01.T01 MTR_7g056393 48.881 268 133 4 34 299 22 287 7.33e-86 263
MsG0880042001.01.T01 MTR_4g024660 45.896 268 141 4 34 299 22 287 1.09e-85 263
MsG0880042001.01.T01 MTR_8g469400 45.896 268 128 7 34 299 22 274 1.90e-78 244
MsG0880042001.01.T01 MTR_1g070185 44.238 269 145 2 33 299 22 287 3.40e-77 241
MsG0880042001.01.T01 MTR_8g009180 70.659 167 32 4 149 299 46 211 2.67e-74 231
MsG0880042001.01.T01 MTR_7g056353 42.652 279 130 5 34 311 24 273 1.02e-68 223
MsG0880042001.01.T01 MTR_1g032220 42.910 268 144 3 36 299 28 290 5.64e-66 212
MsG0880042001.01.T01 MTR_7g105070 39.245 265 159 2 36 299 15 278 1.10e-65 211
MsG0880042001.01.T01 MTR_1g032250 41.696 283 155 4 21 299 14 290 1.14e-64 209
MsG0880042001.01.T01 MTR_1g032140 43.866 269 140 4 36 299 21 283 6.63e-64 206
MsG0880042001.01.T01 MTR_1g044105 51.190 168 71 5 32 191 7 171 1.62e-49 163
MsG0880042001.01.T01 MTR_7g068650 34.276 283 171 7 31 299 1 282 3.78e-48 166
MsG0880042001.01.T01 MTR_3g092890 38.326 227 131 3 77 300 38 258 4.67e-47 162
MsG0880042001.01.T01 MTR_2g068840 37.638 271 146 11 43 299 20 281 8.82e-47 162
MsG0880042001.01.T01 MTR_2g068800 35.075 268 138 9 43 299 20 262 3.12e-43 150
MsG0880042001.01.T01 MTR_4g015790 31.849 292 175 6 32 300 1 291 4.55e-43 152
MsG0880042001.01.T01 MTR_7g056370 37.968 187 112 4 35 219 2 186 6.38e-42 145
MsG0880042001.01.T01 MTR_3g091350 32.881 295 175 7 13 300 5 283 7.86e-42 149
MsG0880042001.01.T01 MTR_1g043840 63.551 107 39 0 193 299 50 156 2.92e-41 147
MsG0880042001.01.T01 MTR_1g043840 59.459 74 29 1 88 161 256 328 8.90e-23 97.4
MsG0880042001.01.T01 MTR_8g024120 33.913 230 147 2 73 300 38 264 2.04e-40 145
MsG0880042001.01.T01 MTR_1g062110 31.818 286 164 9 44 311 26 298 2.65e-40 144
MsG0880042001.01.T01 MTR_4g099380 41.989 181 88 5 21 192 110 282 3.37e-40 142
MsG0880042001.01.T01 MTR_1g062110 32.117 274 162 8 44 299 26 293 4.48e-40 145
MsG0880042001.01.T01 MTR_3g091360 34.783 253 153 7 56 300 28 276 1.26e-38 140
MsG0880042001.01.T01 MTR_3g070860 34.061 229 144 4 77 299 50 277 4.80e-38 139
MsG0880042001.01.T01 MTR_1g070120 35.652 230 139 6 74 299 35 259 5.13e-38 138
MsG0880042001.01.T01 MTR_5g055690 33.704 270 161 9 44 303 12 273 6.40e-38 136
MsG0880042001.01.T01 MTR_3g045230 34.831 267 156 6 43 299 16 274 1.24e-37 137
MsG0880042001.01.T01 MTR_5g082750 35.043 234 145 4 73 300 45 277 1.48e-37 137
MsG0880042001.01.T01 MTR_0009s0480 33.708 267 160 8 44 301 11 269 1.06e-36 133
MsG0880042001.01.T01 MTR_8g075890 34.764 233 141 6 71 296 33 261 1.58e-36 135
MsG0880042001.01.T01 MTR_7g102820 29.195 298 177 8 32 299 7 300 1.86e-36 135
MsG0880042001.01.T01 MTR_1g070135 32.046 259 157 9 52 300 11 260 1.87e-36 133
MsG0880042001.01.T01 MTR_5g055690 34.211 266 157 9 44 299 12 269 2.01e-36 134
MsG0880042001.01.T01 MTR_1g070135 32.171 258 156 9 52 299 11 259 5.30e-36 133
MsG0880042001.01.T01 MTR_5g048850 33.708 267 158 9 44 300 12 269 6.52e-36 131
MsG0880042001.01.T01 MTR_5g055800 34.470 264 158 8 44 299 12 268 7.04e-36 133
MsG0880042001.01.T01 MTR_4g087090 30.364 247 139 5 77 300 30 266 8.31e-36 133
MsG0880042001.01.T01 MTR_8g075830 34.615 234 140 7 71 296 33 261 1.08e-35 133
MsG0880042001.01.T01 MTR_0009s0480 33.835 266 159 8 45 301 12 269 1.10e-35 132
MsG0880042001.01.T01 MTR_1g033810 33.188 229 142 5 77 299 47 270 2.82e-35 131
MsG0880042001.01.T01 MTR_5g048850 34.211 266 156 9 44 299 12 268 2.93e-35 131
MsG0880042001.01.T01 MTR_7g016090 34.524 252 148 8 56 299 18 260 3.49e-35 130
MsG0880042001.01.T01 MTR_5g065010 29.008 262 177 5 44 299 3 261 3.85e-35 130
MsG0880042001.01.T01 MTR_7g016090 34.524 252 148 8 56 299 16 258 4.48e-35 130
MsG0880042001.01.T01 MTR_5g022020 34.583 240 132 9 71 296 33 261 6.41e-35 130
MsG0880042001.01.T01 MTR_5g032870 35.498 231 140 5 77 300 38 266 6.50e-35 130
MsG0880042001.01.T01 MTR_0328s0030 32.830 265 161 8 44 299 10 266 8.37e-35 130
MsG0880042001.01.T01 MTR_6g015950 32.932 249 145 9 60 299 24 259 1.05e-34 129
MsG0880042001.01.T01 MTR_5g048740 33.712 264 159 9 45 299 11 267 2.30e-34 129
MsG0880042001.01.T01 MTR_3g043900 33.582 268 157 8 43 299 16 273 3.71e-34 128
MsG0880042001.01.T01 MTR_1g034120 31.452 248 142 6 77 300 26 269 4.96e-34 128
MsG0880042001.01.T01 MTR_5g055900 32.714 269 156 9 44 299 12 268 6.46e-34 128
MsG0880042001.01.T01 MTR_4g087140 31.734 271 157 6 53 299 1 267 9.31e-34 127
MsG0880042001.01.T01 MTR_1g034060 30.769 247 145 6 77 300 26 269 3.24e-33 126
MsG0880042001.01.T01 MTR_3g058610 33.333 234 143 7 71 296 33 261 4.40e-33 125
MsG0880042001.01.T01 MTR_1g070080 31.718 227 146 5 77 299 38 259 4.51e-33 125
MsG0880042001.01.T01 MTR_5g055820 32.090 268 160 10 44 299 12 269 6.23e-33 125
MsG0880042001.01.T01 MTR_3g063180 32.584 267 158 8 45 296 10 269 6.31e-33 125
MsG0880042001.01.T01 MTR_5g032880 33.478 230 146 5 77 300 376 604 7.08e-33 129
MsG0880042001.01.T01 MTR_5g032880 33.761 234 138 5 74 300 35 258 2.46e-32 127
MsG0880042001.01.T01 MTR_1g034140 33.195 241 134 7 77 299 27 258 7.37e-33 125
MsG0880042001.01.T01 MTR_7g102720 36.820 239 127 7 71 299 31 255 7.40e-33 124
MsG0880042001.01.T01 MTR_5g048550 31.873 251 149 7 64 299 25 268 8.70e-33 125
MsG0880042001.01.T01 MTR_4g087100 32.520 246 138 7 77 299 26 266 1.17e-32 124
MsG0880042001.01.T01 MTR_4g087110 31.020 245 143 5 77 299 26 266 1.17e-32 124
MsG0880042001.01.T01 MTR_4g093840 32.301 226 148 5 77 299 62 285 2.32e-32 124
MsG0880042001.01.T01 MTR_1g070085 30.859 256 163 6 52 299 10 259 5.22e-32 122
MsG0880042001.01.T01 MTR_1g070085 30.859 256 163 6 52 299 10 259 5.22e-32 122
MsG0880042001.01.T01 MTR_7g451860 31.602 231 143 4 77 300 41 263 7.33e-32 122
MsG0880042001.01.T01 MTR_7g047670 31.602 231 143 4 77 300 41 263 7.33e-32 122
MsG0880042001.01.T01 MTR_5g048570 31.933 238 145 8 70 299 38 266 1.24e-31 122
MsG0880042001.01.T01 MTR_0009s0050 33.884 242 135 9 71 299 39 268 1.68e-31 121
MsG0880042001.01.T01 MTR_0009s0050 33.884 242 135 9 71 299 39 268 1.76e-31 121
MsG0880042001.01.T01 MTR_8g064200 29.537 281 184 6 27 299 5 279 2.13e-31 121
MsG0880042001.01.T01 MTR_5g055680 32.283 254 144 8 64 299 25 268 2.85e-31 120
MsG0880042001.01.T01 MTR_8g064200 29.643 280 183 6 28 299 1 274 3.10e-31 120
MsG0880042001.01.T01 MTR_7g062570 30.943 265 167 7 44 299 19 276 3.83e-31 120
MsG0880042001.01.T01 MTR_7g063730 31.373 255 159 7 55 300 39 286 7.64e-31 120
MsG0880042001.01.T01 MTR_4g116010 31.878 229 142 6 77 299 50 270 9.65e-31 119
MsG0880042001.01.T01 MTR_5g048470 29.104 268 169 6 44 299 17 275 2.32e-30 118
MsG0880042001.01.T01 MTR_2g069070 38.462 169 85 4 24 192 13 162 2.41e-30 114
MsG0880042001.01.T01 MTR_2g072890 30.172 232 155 4 72 299 47 275 2.83e-30 118
MsG0880042001.01.T01 MTR_7g062580 28.269 283 175 9 55 326 30 295 2.99e-30 118
MsG0880042001.01.T01 MTR_1g102070 31.621 253 151 4 64 300 45 291 4.58e-30 118
MsG0880042001.01.T01 MTR_7g081710 28.626 262 174 7 47 300 16 272 6.53e-30 117
MsG0880042001.01.T01 MTR_2g072910 31.224 237 152 5 72 302 46 277 7.36e-30 115
MsG0880042001.01.T01 MTR_4g087120 29.796 245 146 5 77 299 26 266 7.84e-30 117
MsG0880042001.01.T01 MTR_1g081840 29.839 248 161 4 64 300 40 285 1.03e-29 117
MsG0880042001.01.T01 MTR_5g011250 32.906 234 142 6 77 299 47 276 1.07e-29 116
MsG0880042001.01.T01 MTR_2g083030 31.250 256 140 8 61 300 22 257 1.42e-29 115
MsG0880042001.01.T01 MTR_5g059140 30.901 233 143 7 77 299 42 266 1.54e-29 115
MsG0880042001.01.T01 MTR_2g072910 31.878 229 145 5 77 299 51 274 3.74e-29 115
MsG0880042001.01.T01 MTR_7g016080 31.405 242 148 7 61 292 20 253 1.13e-28 113
MsG0880042001.01.T01 MTR_2g102570 31.538 260 152 9 53 298 25 272 2.48e-28 113
MsG0880042001.01.T01 MTR_2g083000 30.357 224 152 3 77 300 33 252 4.10e-28 111
MsG0880042001.01.T01 MTR_3g088565 30.043 233 143 9 76 299 2 223 6.41e-28 110
MsG0880042001.01.T01 MTR_3g096500 31.197 234 148 3 78 300 67 298 8.77e-28 112
MsG0880042001.01.T01 MTR_4g074130 29.317 249 157 4 63 300 21 261 1.11e-27 110
MsG0880042001.01.T01 MTR_5g059130 30.303 231 145 6 77 299 44 266 1.56e-27 110
MsG0880042001.01.T01 MTR_7g045650 29.268 287 180 11 27 299 4 281 1.61e-27 110
MsG0880042001.01.T01 MTR_3g040410 28.750 240 139 7 76 300 5 227 3.73e-27 108
MsG0880042001.01.T01 MTR_3g072820 29.520 271 172 7 40 299 2 264 8.11e-27 108
MsG0880042001.01.T01 MTR_3g464530 30.802 237 139 8 74 300 31 252 1.10e-26 107
MsG0880042001.01.T01 MTR_3g464530 30.380 237 140 8 74 300 31 252 1.28e-26 106
MsG0880042001.01.T01 MTR_5g005570 31.169 231 141 5 77 300 37 256 1.56e-26 107
MsG0880042001.01.T01 MTR_6g464620 29.839 248 162 4 64 300 50 296 2.41e-26 107
MsG0880042001.01.T01 MTR_7g062560 29.762 252 153 7 56 299 38 273 2.53e-26 107
MsG0880042001.01.T01 MTR_5g085330 30.802 237 133 9 76 300 7 224 2.55e-26 106
MsG0880042001.01.T01 MTR_7g062600 29.688 256 159 10 56 299 27 273 2.73e-26 107
MsG0880042001.01.T01 MTR_2g025120 27.848 237 145 8 77 302 4 225 9.83e-26 103
MsG0880042001.01.T01 MTR_7g062550 28.063 253 166 7 56 299 36 281 1.11e-25 105
MsG0880042001.01.T01 MTR_1g048940 31.278 227 144 8 77 296 45 266 2.42e-25 104
MsG0880042001.01.T01 MTR_3g026150 29.237 236 156 7 70 300 53 282 3.91e-25 102
MsG0880042001.01.T01 MTR_3g083370 29.536 237 139 10 77 301 4 224 4.02e-25 101
MsG0880042001.01.T01 MTR_2g025120 28.085 235 143 8 77 300 4 223 4.54e-25 103
MsG0880042001.01.T01 MTR_8g074050 30.870 230 147 8 77 299 52 276 6.08e-25 103
MsG0880042001.01.T01 MTR_3g026150 29.237 236 156 7 70 300 53 282 9.64e-25 103
MsG0880042001.01.T01 MTR_2g437380 27.660 235 152 5 77 300 50 277 1.05e-24 103
MsG0880042001.01.T01 MTR_3g117420 28.821 229 153 6 77 299 52 276 1.47e-24 102
MsG0880042001.01.T01 MTR_3g083370 29.787 235 137 10 77 299 4 222 1.95e-24 101
MsG0880042001.01.T01 MTR_1g011580 29.752 242 146 8 67 299 53 279 2.48e-24 102
MsG0880042001.01.T01 MTR_3g117485 28.571 231 154 7 77 299 49 276 3.55e-24 101
MsG0880042001.01.T01 MTR_8g074070 30.131 229 150 7 77 299 52 276 5.47e-24 100
MsG0880042001.01.T01 MTR_3g088745 28.421 285 173 8 56 317 16 292 6.36e-24 100
MsG0880042001.01.T01 MTR_4g087130 30.242 248 142 6 77 300 26 266 5.24e-23 98.2
MsG0880042001.01.T01 MTR_1g032240 46.087 115 62 0 179 293 3 117 6.11e-23 94.4
MsG0880042001.01.T01 MTR_8g033380 29.614 233 154 3 77 300 54 285 1.15e-22 97.4
MsG0880042001.01.T01 MTR_8g093930 23.913 276 191 4 40 300 6 277 5.51e-22 95.5
MsG0880042001.01.T01 MTR_8g074070 29.646 226 136 7 77 299 52 257 3.35e-21 92.8
MsG0880042001.01.T01 MTR_1g070100 32.759 174 112 3 130 299 5 177 2.86e-20 89.0
MsG0880042001.01.T01 MTR_1g070085 32.759 174 112 3 130 299 9 181 3.35e-20 89.0
MsG0880042001.01.T01 MTR_3g072810 29.796 245 151 6 68 300 27 262 3.49e-20 90.1
MsG0880042001.01.T01 MTR_6g092620 26.496 234 150 8 76 299 2 223 3.56e-20 89.4
MsG0880042001.01.T01 MTR_8g093980 25.524 286 186 7 56 321 38 316 4.32e-20 90.5
MsG0880042001.01.T01 MTR_0056s0160 36.957 138 83 2 166 299 16 153 1.36e-19 86.7
MsG0880042001.01.T01 MTR_5g025090 27.542 236 137 9 76 299 4 217 1.57e-19 87.8
MsG0880042001.01.T01 MTR_5g025050 27.778 234 135 9 76 297 4 215 4.87e-19 86.3
MsG0880042001.01.T01 MTR_5g025060 26.957 230 130 8 73 300 2 195 1.48e-18 84.7
MsG0880042001.01.T01 MTR_2g019370 27.984 243 140 10 77 300 28 254 1.56e-18 85.5
MsG0880042001.01.T01 MTR_6g088665 26.141 241 149 7 85 299 24 261 6.12e-18 83.6
MsG0880042001.01.T01 MTR_6g088665 26.033 242 149 7 85 299 24 262 7.79e-18 83.6
MsG0880042001.01.T01 MTR_2g068850 30.198 202 112 10 43 221 20 215 1.57e-17 80.5
MsG0880042001.01.T01 MTR_5g027230 26.667 240 142 9 73 300 2 219 2.76e-17 81.3
MsG0880042001.01.T01 MTR_3g117485 28.283 198 131 7 110 299 10 204 4.51e-17 80.5
MsG0880042001.01.T01 MTR_0009s0050 34.286 140 84 4 166 299 33 170 1.12e-16 79.0
MsG0880042001.01.T01 MTR_0009s0050 34.286 140 84 4 166 299 33 170 1.27e-16 79.0
MsG0880042001.01.T01 MTR_4g100600 26.894 264 158 9 70 311 2 252 3.10e-16 78.6
MsG0880042001.01.T01 MTR_7g077670 30.488 246 141 10 70 300 3 233 9.96e-16 77.0
MsG0880042001.01.T01 MTR_4g123020 26.180 233 153 6 76 299 19 241 1.31e-15 76.6
MsG0880042001.01.T01 MTR_7g084360 50.575 87 42 1 190 275 7 93 1.00e-14 70.5
MsG0880042001.01.T01 MTR_3g026150 27.072 181 125 5 125 300 1 179 1.32e-14 73.2
MsG0880042001.01.T01 MTR_0009s0050 40.000 90 49 3 213 299 1 88 1.78e-14 70.9
MsG0880042001.01.T01 MTR_4g115990 27.723 202 118 7 114 305 76 259 4.61e-14 72.4
MsG0880042001.01.T01 MTR_4g100590 24.719 267 155 11 70 311 2 247 6.38e-14 71.6
MsG0880042001.01.T01 MTR_8g030880 28.151 238 154 7 74 300 2 233 8.61e-14 71.6
MsG0880042001.01.T01 MTR_0009s0410 31.788 151 90 6 45 190 12 154 9.03e-14 68.6
MsG0880042001.01.T01 MTR_2g437380 25.397 189 123 5 122 299 1 182 1.26e-13 70.5
MsG0880042001.01.T01 MTR_0009s0400 46.032 63 33 1 238 299 2 64 2.24e-12 64.3
MsG0880042001.01.T01 MTR_1g027290 24.400 250 169 7 77 314 29 270 8.27e-12 65.9
MsG0880042001.01.T01 MTR_1g032230 30.597 134 66 2 36 165 22 132 5.72e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042001.01.T01 AT5G59540 57.143 273 109 5 34 300 14 284 3.65e-113 330
MsG0880042001.01.T01 AT5G59540 57.353 272 108 5 34 299 14 283 9.36e-113 332
MsG0880042001.01.T01 AT5G43440 54.348 276 118 2 32 301 11 284 1.33e-112 328
MsG0880042001.01.T01 AT1G06640 55.137 292 119 4 26 309 8 295 5.37e-111 326
MsG0880042001.01.T01 AT1G06620 56.134 269 113 3 36 301 18 284 1.41e-110 323
MsG0880042001.01.T01 AT5G43440 54.015 274 118 2 32 299 11 282 3.54e-110 325
MsG0880042001.01.T01 AT1G06650 56.044 273 113 3 33 299 14 285 2.64e-109 321
MsG0880042001.01.T01 AT1G06620 56.180 267 112 3 36 299 18 282 8.04e-109 322
MsG0880042001.01.T01 AT1G06650 56.044 273 113 3 33 299 14 285 1.04e-108 322
MsG0880042001.01.T01 AT1G04350 54.945 273 111 5 33 299 10 276 2.14e-108 320
MsG0880042001.01.T01 AT1G06640 56.028 282 112 4 26 299 8 285 5.40e-108 320
MsG0880042001.01.T01 AT2G30840 52.837 282 127 3 33 309 9 289 4.56e-107 315
MsG0880042001.01.T01 AT1G06640 55.714 280 112 4 26 297 8 283 4.63e-107 314
MsG0880042001.01.T01 AT5G59530 56.044 273 109 7 34 299 13 281 6.82e-107 317
MsG0880042001.01.T01 AT2G30840 53.676 272 120 3 33 299 9 279 3.26e-105 312
MsG0880042001.01.T01 AT2G30840 53.676 272 120 3 33 299 9 279 3.91e-105 312
MsG0880042001.01.T01 AT1G06645 53.061 294 123 5 15 299 8 295 2.92e-104 310
MsG0880042001.01.T01 AT2G30830 53.358 268 123 2 33 299 9 275 8.72e-103 306
MsG0880042001.01.T01 AT5G43450 50.725 276 125 4 32 301 11 281 4.78e-102 301
MsG0880042001.01.T01 AT1G03410 52.206 272 124 3 33 299 8 278 5.67e-101 301
MsG0880042001.01.T01 AT1G03410 52.206 272 124 3 33 299 45 315 2.46e-100 301
MsG0880042001.01.T01 AT5G43450 50.365 274 125 4 32 299 11 279 4.27e-100 299
MsG0880042001.01.T01 AT1G04380 51.103 272 114 5 33 303 13 266 3.97e-99 293
MsG0880042001.01.T01 AT2G25450 52.416 269 124 3 33 299 9 275 1.82e-98 295
MsG0880042001.01.T01 AT1G04380 51.119 268 112 5 33 299 13 262 3.07e-97 291
MsG0880042001.01.T01 AT3G61400 48.780 287 137 5 22 299 2 287 8.70e-93 278
MsG0880042001.01.T01 AT3G61400 48.780 287 137 5 22 299 2 287 3.31e-92 280
MsG0880042001.01.T01 AT1G03400 50.185 271 121 5 33 299 8 268 5.67e-91 276
MsG0880042001.01.T01 AT1G03400 50.185 271 121 5 33 299 8 268 3.45e-90 275
MsG0880042001.01.T01 AT3G13610 34.559 272 148 10 43 299 25 281 7.02e-45 157
MsG0880042001.01.T01 AT4G10500 34.222 225 143 2 77 299 44 265 1.15e-44 156
MsG0880042001.01.T01 AT1G55290 33.948 271 152 8 43 299 24 281 1.38e-44 156
MsG0880042001.01.T01 AT3G12900 35.769 260 161 5 43 299 20 276 2.25e-44 155
MsG0880042001.01.T01 AT4G10490 31.356 236 157 2 66 299 31 263 1.91e-42 150
MsG0880042001.01.T01 AT2G36690 32.222 270 167 8 42 299 18 283 2.90e-41 147
MsG0880042001.01.T01 AT2G36690 32.222 270 167 8 42 299 18 283 2.90e-41 147
MsG0880042001.01.T01 AT5G24530 33.040 227 143 3 77 300 38 258 1.20e-40 145
MsG0880042001.01.T01 AT3G55970 32.168 286 179 7 32 303 1 285 8.10e-40 142
MsG0880042001.01.T01 AT2G38240 33.835 266 159 6 45 299 12 271 9.32e-40 143
MsG0880042001.01.T01 AT3G55970 32.270 282 176 7 32 299 1 281 1.20e-38 140
MsG0880042001.01.T01 AT5G05600 30.566 265 172 6 45 299 27 289 2.52e-37 135
MsG0880042001.01.T01 AT5G05600 30.566 265 172 6 45 299 27 289 8.20e-37 136
MsG0880042001.01.T01 AT1G17020 34.914 232 136 7 77 299 53 278 3.43e-36 134
MsG0880042001.01.T01 AT3G19000 32.000 250 140 7 74 301 29 270 2.20e-35 130
MsG0880042001.01.T01 AT3G11180 31.343 268 166 6 45 299 56 318 2.36e-35 132
MsG0880042001.01.T01 AT3G11180 31.343 268 166 6 45 299 56 318 2.46e-35 132
MsG0880042001.01.T01 AT3G51240 34.483 232 143 5 71 296 32 260 5.68e-35 130
MsG0880042001.01.T01 AT3G19000 32.258 248 138 7 74 299 29 268 7.82e-35 130
MsG0880042001.01.T01 AT4G25300 33.188 229 143 6 77 299 52 276 4.24e-34 128
MsG0880042001.01.T01 AT3G19010 31.579 247 146 5 72 300 23 264 1.53e-33 125
MsG0880042001.01.T01 AT3G19010 31.707 246 145 5 72 299 23 263 1.68e-33 127
MsG0880042001.01.T01 AT3G19010 31.707 246 145 5 72 299 23 263 1.68e-33 127
MsG0880042001.01.T01 AT4G22880 31.716 268 172 7 41 299 11 276 1.71e-32 124
MsG0880042001.01.T01 AT4G22880 31.716 268 172 7 41 299 11 276 1.71e-32 124
MsG0880042001.01.T01 AT4G22880 31.716 268 172 7 41 299 11 276 1.71e-32 124
MsG0880042001.01.T01 AT4G25310 32.864 213 124 7 97 299 70 273 3.37e-32 123
MsG0880042001.01.T01 AT2G44800 29.825 285 172 10 32 299 1 274 1.19e-31 122
MsG0880042001.01.T01 AT1G17010 31.746 252 159 7 57 299 31 278 1.64e-30 119
MsG0880042001.01.T01 AT1G78550 30.709 254 157 8 57 299 31 276 1.76e-30 119
MsG0880042001.01.T01 AT3G60290 32.174 230 144 7 77 300 52 275 1.87e-30 119
MsG0880042001.01.T01 AT1G15550 32.780 241 132 9 73 299 53 277 5.43e-30 117
MsG0880042001.01.T01 AT3G21420 31.405 242 150 4 69 300 47 282 7.34e-30 117
MsG0880042001.01.T01 AT5G08640 32.900 231 139 7 76 298 42 264 9.55e-30 116
MsG0880042001.01.T01 AT5G08640 32.900 231 139 7 76 298 42 264 9.55e-30 116
MsG0880042001.01.T01 AT4G16330 27.483 302 181 8 6 296 11 285 4.67e-29 115
MsG0880042001.01.T01 AT5G07200 28.269 283 187 6 31 300 12 291 6.07e-29 115
MsG0880042001.01.T01 AT1G60980 29.861 288 174 8 30 300 16 292 6.59e-29 115
MsG0880042001.01.T01 AT4G21200 29.258 229 147 4 77 300 42 260 7.55e-29 114
MsG0880042001.01.T01 AT4G25420 29.457 258 170 3 56 303 40 295 8.51e-29 113
MsG0880042001.01.T01 AT4G25420 29.804 255 167 3 56 300 40 292 1.58e-28 114
MsG0880042001.01.T01 AT1G77330 29.317 249 150 8 76 311 2 237 1.59e-27 109
MsG0880042001.01.T01 AT5G07480 28.794 257 169 7 50 296 18 270 9.27e-27 108
MsG0880042001.01.T01 AT5G51810 31.513 238 139 6 77 300 63 290 6.84e-26 106
MsG0880042001.01.T01 AT5G51810 31.624 234 136 6 77 296 63 286 9.03e-26 104
MsG0880042001.01.T01 AT5G12270 27.985 268 176 6 42 299 18 278 1.34e-25 105
MsG0880042001.01.T01 AT3G19010 29.487 234 136 7 72 299 23 233 1.54e-25 104
MsG0880042001.01.T01 AT1G80330 29.137 278 143 10 53 298 16 271 3.20e-25 104
MsG0880042001.01.T01 AT1G62380 28.509 228 149 7 77 299 7 225 7.78e-25 102
MsG0880042001.01.T01 AT1G50960 28.333 240 162 4 68 300 25 261 9.27e-25 102
MsG0880042001.01.T01 AT1G05010 29.362 235 140 9 77 300 4 223 1.54e-24 102
MsG0880042001.01.T01 AT1G78550 29.949 197 129 5 109 299 5 198 1.74e-24 100
MsG0880042001.01.T01 AT1G12010 29.787 235 137 10 77 299 7 225 1.78e-24 101
MsG0880042001.01.T01 AT5G63580 30.000 240 142 7 74 301 16 241 4.71e-24 99.4
MsG0880042001.01.T01 AT1G80340 28.102 274 143 9 53 299 24 270 6.97e-24 100
MsG0880042001.01.T01 AT5G63580 29.661 236 142 6 74 298 16 238 1.64e-23 97.4
MsG0880042001.01.T01 AT1G44090 30.252 238 146 6 77 300 63 294 2.41e-23 99.8
MsG0880042001.01.T01 AT5G63590 32.159 227 140 5 77 296 14 233 4.58e-23 97.8
MsG0880042001.01.T01 AT5G63600 31.004 229 138 7 77 298 33 248 7.97e-23 97.4
MsG0880042001.01.T01 AT5G63600 31.004 229 138 7 77 298 33 248 8.67e-23 97.4
MsG0880042001.01.T01 AT5G63595 29.167 240 120 8 73 298 21 224 2.55e-22 95.1
MsG0880042001.01.T01 AT5G20400 27.652 264 180 6 45 299 9 270 4.70e-22 95.5
MsG0880042001.01.T01 AT4G16330 35.075 134 84 1 166 296 46 179 1.61e-21 92.4
MsG0880042001.01.T01 AT3G51240 35.556 135 82 2 167 296 42 176 2.18e-21 92.4
MsG0880042001.01.T01 AT5G58660 27.481 262 141 10 77 305 34 279 4.12e-20 89.0
MsG0880042001.01.T01 AT4G21690 29.339 242 142 8 73 297 43 272 5.77e-20 89.7
MsG0880042001.01.T01 AT5G58660 28.016 257 136 10 77 300 34 274 6.25e-20 89.7
MsG0880042001.01.T01 AT5G20550 27.444 266 179 8 45 299 9 271 9.48e-20 89.0
MsG0880042001.01.T01 AT2G19590 28.755 233 141 9 77 299 11 228 1.24e-19 88.2
MsG0880042001.01.T01 AT1G30040 27.092 251 134 9 73 299 27 252 2.69e-19 86.7
MsG0880042001.01.T01 AT4G25310 27.358 212 109 7 97 299 70 245 4.65e-19 86.7
MsG0880042001.01.T01 AT1G30040 27.092 251 134 9 73 299 27 252 5.17e-19 87.0
MsG0880042001.01.T01 AT3G47190 24.710 259 163 7 77 318 32 275 5.27e-19 86.7
MsG0880042001.01.T01 AT5G54000 28.509 228 155 5 80 300 46 272 9.11e-19 86.3
MsG0880042001.01.T01 AT1G49390 26.136 264 184 6 45 299 9 270 1.27e-18 85.9
MsG0880042001.01.T01 AT2G34555 27.917 240 141 8 76 300 26 248 2.38e-17 82.0
MsG0880042001.01.T01 AT4G25300 37.273 110 67 2 192 299 73 182 2.74e-17 80.9
MsG0880042001.01.T01 AT1G14120 30.802 237 126 11 76 297 7 220 7.70e-17 80.1
MsG0880042001.01.T01 AT1G14120 30.802 237 126 11 76 297 7 220 7.70e-17 80.1
MsG0880042001.01.T01 AT1G14120 30.802 237 126 11 76 297 7 220 7.70e-17 80.1
MsG0880042001.01.T01 AT4G23340 30.769 208 129 6 103 300 30 232 2.46e-16 79.0
MsG0880042001.01.T01 AT1G14130 28.692 237 131 8 76 297 8 221 2.49e-16 79.0
MsG0880042001.01.T01 AT5G51310 25.210 238 155 5 77 300 5 233 7.18e-16 77.8
MsG0880042001.01.T01 AT5G54000 27.461 193 134 4 113 300 1 192 1.05e-15 76.3
MsG0880042001.01.T01 AT5G43935 25.000 236 130 8 77 298 19 221 1.52e-15 76.3
MsG0880042001.01.T01 AT1G78440 25.100 251 138 9 76 300 17 243 1.16e-14 74.3
MsG0880042001.01.T01 AT1G49390 26.562 192 135 4 113 299 1 191 8.90e-14 70.9
MsG0880042001.01.T01 AT2G19590 28.000 200 122 8 110 299 26 213 1.88e-13 70.1
MsG0880042001.01.T01 AT4G16770 25.847 236 148 7 72 288 17 244 7.78e-13 67.8
MsG0880042001.01.T01 AT3G46490 25.490 255 164 7 69 299 4 256 1.55e-12 67.8
MsG0880042001.01.T01 AT2G06960 50.000 54 22 1 240 293 33 81 1.78e-12 64.7
MsG0880042001.01.T01 AT3G46490 25.490 255 164 7 69 299 4 256 1.80e-12 67.8

Find 71 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGTTCCCACAGTCAATTC+TGG 0.216881 8:-2328588 None:intergenic
AAGTTCTTTGTAAAGATAAA+TGG 0.230276 8:+2328670 MsG0880042001.01.T01:CDS
ACATACAAGTATAAGAAATA+TGG 0.265397 8:+2327310 MsG0880042001.01.T01:CDS
TTGGCTTTCTCATATTTATC+AGG 0.298572 8:-2327467 None:intergenic
ATACTTGTATGTAGTGGTTC+TGG 0.315182 8:-2327299 None:intergenic
TCTTCTGGCTTGAGAGTATC+AGG 0.348742 8:-2327812 None:intergenic
ATAATTGCTATTGTAAATAA+AGG 0.349980 8:-2327729 None:intergenic
TCCAAATCATCTAAAAGATA+TGG 0.350321 8:+2328512 MsG0880042001.01.T01:CDS
CATACCACAGGAATCTCTTC+TGG 0.370423 8:-2327827 None:intergenic
ATTCTTGAGGATTTGAAAGA+TGG 0.382062 8:+2327638 MsG0880042001.01.T01:CDS
GGAGCTCTCATAGTTAATAT+TGG 0.382954 8:+2328714 MsG0880042001.01.T01:CDS
CCCACAGTCAATTCTGGTTC+AGG 0.384551 8:-2328582 None:intergenic
AGAGATATACTGCTAGAATA+TGG 0.387088 8:+2328426 MsG0880042001.01.T01:intron
AAGGAAGCATGTGAAACATT+AGG 0.387874 8:+2327578 MsG0880042001.01.T01:CDS
GGAAAACACATGATGAATCT+TGG 0.394624 8:+2328447 MsG0880042001.01.T01:CDS
TTGTTGATGAAGGACTTAAA+AGG 0.398535 8:+2327420 MsG0880042001.01.T01:CDS
GAATTGTTATCAGAAGCTTT+AGG 0.399343 8:+2328483 MsG0880042001.01.T01:CDS
AATAACATGGCTTGTGTTGT+TGG 0.428788 8:-2327486 None:intergenic
ATAGCCCACCAGCACTCAAT+TGG 0.433409 8:+2327759 MsG0880042001.01.T01:CDS
GAACTTGGAGGCCACCAATA+TGG 0.439098 8:-2328653 None:intergenic
CAGGACAAGAAGGATAATAA+TGG 0.443073 8:-2328563 None:intergenic
GCATTTGATGAAACAAAATC+TGG 0.443417 8:+2327386 MsG0880042001.01.T01:CDS
ATTTATCTTTACAAAGAACT+TGG 0.447148 8:-2328668 None:intergenic
CATACAAGTATAAGAAATAT+GGG 0.453807 8:+2327311 MsG0880042001.01.T01:CDS
GTTCATTCATTATAGAATCA+AGG 0.461900 8:-2327358 None:intergenic
GAAGCACTGTGAGAAAACTA+TGG 0.463994 8:-2328623 None:intergenic
TTCTTGAGGATTTGAAAGAT+GGG 0.475634 8:+2327639 MsG0880042001.01.T01:CDS
TGACTTTCTCGACTATCCCT+TGG 0.479256 8:-2327556 None:intergenic
ATTTGAAAGATGGGGTGAAA+AGG 0.482766 8:+2327648 MsG0880042001.01.T01:CDS
GTGCTTCTACAAGACCATAT+TGG 0.485099 8:+2328639 MsG0880042001.01.T01:CDS
TTCATTATAGAATCAAGGTT+AGG 0.490953 8:-2327353 None:intergenic
AAGAGATTCCTGTGGTATGC+AGG 0.491788 8:+2327831 MsG0880042001.01.T01:CDS
TCCCTCCAATTGAGTGCTGG+TGG 0.494894 8:-2327764 None:intergenic
AAAACTATGGTCTGAATGCT+TGG 0.498125 8:-2328610 None:intergenic
AAAGATATGGATTGTGCTCA+AGG 0.499338 8:+2328525 MsG0880042001.01.T01:CDS
TAATGGAAACTATACACATA+AGG 0.506418 8:-2328765 None:intergenic
GGTTGACAATGGAATATCTC+AGG 0.506900 8:-2327446 None:intergenic
TATCTTTACAAAGAACTTGG+AGG 0.511057 8:-2328665 None:intergenic
CCCTCCAATTGAGTGCTGGT+GGG 0.511202 8:-2327763 None:intergenic
TAATATTGGTGATCTTCTGC+AGG 0.515717 8:+2328728 MsG0880042001.01.T01:CDS
CATATTTATCAGGTTGACAA+TGG 0.524901 8:-2327457 None:intergenic
TTTCTTATACTTGTATGTAG+TGG 0.526228 8:-2327305 None:intergenic
ACTATGAGAGCTCCAGGTAC+AGG 0.532297 8:-2328705 None:intergenic
ATATTAACTATGAGAGCTCC+AGG 0.542016 8:-2328711 None:intergenic
GCCCACCAGCACTCAATTGG+AGG 0.544222 8:+2327762 MsG0880042001.01.T01:CDS
AATCCTCAAGAATACTCAAA+GGG 0.550101 8:-2327628 None:intergenic
GAAACAAAATCTGGTGTGAA+AGG 0.553475 8:+2327395 MsG0880042001.01.T01:CDS
GTTAGGCATGGTTGTATCAG+TGG 0.565182 8:-2327336 None:intergenic
GTATCCCTCCAATTGAGTGC+TGG 0.565810 8:-2327767 None:intergenic
AATCCCTTTGAGTATTCTTG+AGG 0.567268 8:+2327625 MsG0880042001.01.T01:CDS
ATATCTGCAAGGTCTATGAC+AGG 0.576610 8:-2327509 None:intergenic
TACTAGTACCTGCATACCAC+AGG 0.580893 8:-2327839 None:intergenic
ATTGATATAACACCTGTACC+TGG 0.585161 8:+2328693 MsG0880042001.01.T01:CDS
CATTCTGATTGCTCAACAAG+TGG 0.586231 8:-2328809 None:intergenic
GTGAAAGGAATTGTTGATGA+AGG 0.587927 8:+2327410 MsG0880042001.01.T01:CDS
AATTCTGGTTCAGGACAAGA+AGG 0.588777 8:-2328573 None:intergenic
AAATCCTCAAGAATACTCAA+AGG 0.589563 8:-2327629 None:intergenic
TATAGAATCAAGGTTAGGCA+TGG 0.592736 8:-2327348 None:intergenic
TCTTGAGGATTTGAAAGATG+GGG 0.598044 8:+2327640 MsG0880042001.01.T01:CDS
AAGATATGGATTGTGCTCAA+GGG 0.620664 8:+2328526 MsG0880042001.01.T01:CDS
CTTCTACAAGACCATATTGG+TGG 0.623893 8:+2328642 MsG0880042001.01.T01:CDS
CTTTATGATCAATATCTGCA+AGG 0.625347 8:-2327520 None:intergenic
CCCACCAGCACTCAATTGGA+GGG 0.629295 8:+2327763 MsG0880042001.01.T01:CDS
AAGATTCAAGCATTCACCAA+GGG 0.645226 8:+2327540 MsG0880042001.01.T01:CDS
TCTGGCTTGAGAGTATCAGG+TGG 0.651839 8:-2327809 None:intergenic
AGGGATAGTCGAGAAAGTCA+AGG 0.652795 8:+2327559 MsG0880042001.01.T01:CDS
TCCTGAACCAGAATTGACTG+TGG 0.682984 8:+2328581 MsG0880042001.01.T01:CDS
AAAGATTCAAGCATTCACCA+AGG 0.683271 8:+2327539 MsG0880042001.01.T01:CDS
GGTCTATGACAGGAATAACA+TGG 0.684175 8:-2327499 None:intergenic
CAAGCCAGAAGAGATTCCTG+TGG 0.691640 8:+2327823 MsG0880042001.01.T01:CDS
CCTGAACCAGAATTGACTGT+GGG 0.714206 8:+2328582 MsG0880042001.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTCTTTCATAA+TGG - Chr8:2328785-2328804 None:intergenic 10.0%
!!! ATAATTGCTATTGTAAATAA+AGG - Chr8:2327732-2327751 None:intergenic 15.0%
!! AAGTTCTTTGTAAAGATAAA+TGG + Chr8:2328670-2328689 MsG0880042001.01.T01:CDS 20.0%
!! ACATACAAGTATAAGAAATA+TGG + Chr8:2327310-2327329 MsG0880042001.01.T01:CDS 20.0%
!! ATTTATCAAAGTTTGAATCT+TGG + Chr8:2328211-2328230 MsG0880042001.01.T01:intron 20.0%
!! ATTTATCTTTACAAAGAACT+TGG - Chr8:2328671-2328690 None:intergenic 20.0%
!! CATACAAGTATAAGAAATAT+GGG + Chr8:2327311-2327330 MsG0880042001.01.T01:CDS 20.0%
!! TCTAGTAAACATCAAAATAA+CGG - Chr8:2328128-2328147 None:intergenic 20.0%
!!! ATTTTTTTCTCTCTTCTAAT+TGG + Chr8:2328389-2328408 MsG0880042001.01.T01:intron 20.0%
! ATTAATTGGTAAAACTGCTT+TGG + Chr8:2328100-2328119 MsG0880042001.01.T01:intron 25.0%
! CAACTGATAGAAATTATTGA+AGG + Chr8:2328343-2328362 MsG0880042001.01.T01:intron 25.0%
! CTTCAATAATTTCTATCAGT+TGG - Chr8:2328345-2328364 None:intergenic 25.0%
! GTTCATTCATTATAGAATCA+AGG - Chr8:2327361-2327380 None:intergenic 25.0%
! TAATGGAAACTATACACATA+AGG - Chr8:2328768-2328787 None:intergenic 25.0%
! TAGAAGAGAGAAAAAAATTG+AGG - Chr8:2328387-2328406 None:intergenic 25.0%
! TCCAAATCATCTAAAAGATA+TGG + Chr8:2328512-2328531 MsG0880042001.01.T01:CDS 25.0%
! TTCATTATAGAATCAAGGTT+AGG - Chr8:2327356-2327375 None:intergenic 25.0%
! TTTCTTATACTTGTATGTAG+TGG - Chr8:2327308-2327327 None:intergenic 25.0%
!! TCCATATCTTTTAGATGATT+TGG - Chr8:2328516-2328535 None:intergenic 25.0%
!!! TGAAACATTAGGTTTTTTTC+AGG + Chr8:2327589-2327608 MsG0880042001.01.T01:CDS 25.0%
!!! TTGGTCTTTTATAATTGCTT+TGG - Chr8:2328326-2328345 None:intergenic 25.0%
!!! TTTAAGCTGCATTGATTAAT+TGG + Chr8:2328086-2328105 MsG0880042001.01.T01:intron 25.0%
!!! TTTTTTCAGGTTGTTAATCA+TGG + Chr8:2327602-2327621 MsG0880042001.01.T01:CDS 25.0%
AAATCCTCAAGAATACTCAA+AGG - Chr8:2327632-2327651 None:intergenic 30.0%
AATCCTCAAGAATACTCAAA+GGG - Chr8:2327631-2327650 None:intergenic 30.0%
AGAGATATACTGCTAGAATA+TGG + Chr8:2328426-2328445 MsG0880042001.01.T01:intron 30.0%
ATTCTTGAGGATTTGAAAGA+TGG + Chr8:2327638-2327657 MsG0880042001.01.T01:CDS 30.0%
CTTTATGATCAATATCTGCA+AGG - Chr8:2327523-2327542 None:intergenic 30.0%
GAATTGTTATCAGAAGCTTT+AGG + Chr8:2328483-2328502 MsG0880042001.01.T01:CDS 30.0%
GCATTTGATGAAACAAAATC+TGG + Chr8:2327386-2327405 MsG0880042001.01.T01:CDS 30.0%
TACAGAATAACCAAAGTTCA+AGG - Chr8:2327898-2327917 None:intergenic 30.0%
TAGAGAATGTAATATGCAGA+AGG - Chr8:2328018-2328037 None:intergenic 30.0%
TATCTTTACAAAGAACTTGG+AGG - Chr8:2328668-2328687 None:intergenic 30.0%
TTCTTGAGGATTTGAAAGAT+GGG + Chr8:2327639-2327658 MsG0880042001.01.T01:CDS 30.0%
TTTATGTACTCCTTGAACTT+TGG + Chr8:2327885-2327904 MsG0880042001.01.T01:intron 30.0%
! ACATTTAATCTGAAGTGTGT+CGG - Chr8:2327935-2327954 None:intergenic 30.0%
! CTACCATTTTCGCTAAAAAT+CGG + Chr8:2328290-2328309 MsG0880042001.01.T01:intron 30.0%
! TTGGCTTTCTCATATTTATC+AGG - Chr8:2327470-2327489 None:intergenic 30.0%
! TTGTTGATGAAGGACTTAAA+AGG + Chr8:2327420-2327439 MsG0880042001.01.T01:CDS 30.0%
!! CATATTTATCAGGTTGACAA+TGG - Chr8:2327460-2327479 None:intergenic 30.0%
!!! ATTTTTAGCGAAAATGGTAG+TGG - Chr8:2328290-2328309 None:intergenic 30.0%
AAAACTATGGTCTGAATGCT+TGG - Chr8:2328613-2328632 None:intergenic 35.0%
AAAGATTCAAGCATTCACCA+AGG + Chr8:2327539-2327558 MsG0880042001.01.T01:CDS 35.0%
AAGATTCAAGCATTCACCAA+GGG + Chr8:2327540-2327559 MsG0880042001.01.T01:CDS 35.0%
AATCCCTTTGAGTATTCTTG+AGG + Chr8:2327625-2327644 MsG0880042001.01.T01:CDS 35.0%
ACTAGAAATGCATACTTTCG+TGG + Chr8:2328142-2328161 MsG0880042001.01.T01:intron 35.0%
ATACTTGTATGTAGTGGTTC+TGG - Chr8:2327302-2327321 None:intergenic 35.0%
ATATTAACTATGAGAGCTCC+AGG - Chr8:2328714-2328733 None:intergenic 35.0%
ATTGATATAACACCTGTACC+TGG + Chr8:2328693-2328712 MsG0880042001.01.T01:CDS 35.0%
ATTTGAAAGATGGGGTGAAA+AGG + Chr8:2327648-2327667 MsG0880042001.01.T01:CDS 35.0%
CAGGACAAGAAGGATAATAA+TGG - Chr8:2328566-2328585 None:intergenic 35.0%
GAAACAAAATCTGGTGTGAA+AGG + Chr8:2327395-2327414 MsG0880042001.01.T01:CDS 35.0%
GGAAAACACATGATGAATCT+TGG + Chr8:2328447-2328466 MsG0880042001.01.T01:CDS 35.0%
GGAGCTCTCATAGTTAATAT+TGG + Chr8:2328714-2328733 MsG0880042001.01.T01:CDS 35.0%
GTCGGAATTTACTTATCTCT+TGG + Chr8:2328249-2328268 MsG0880042001.01.T01:intron 35.0%
TATAGAATCAAGGTTAGGCA+TGG - Chr8:2327351-2327370 None:intergenic 35.0%
TCTTGAGGATTTGAAAGATG+GGG + Chr8:2327640-2327659 MsG0880042001.01.T01:CDS 35.0%
TGGCTGAAACAATCTTTAGT+CGG + Chr8:2328231-2328250 MsG0880042001.01.T01:intron 35.0%
! AAAGATATGGATTGTGCTCA+AGG + Chr8:2328525-2328544 MsG0880042001.01.T01:CDS 35.0%
! AAGATATGGATTGTGCTCAA+GGG + Chr8:2328526-2328545 MsG0880042001.01.T01:CDS 35.0%
! AAGGAAGCATGTGAAACATT+AGG + Chr8:2327578-2327597 MsG0880042001.01.T01:CDS 35.0%
! AATAACATGGCTTGTGTTGT+TGG - Chr8:2327489-2327508 None:intergenic 35.0%
! GTGAAAGGAATTGTTGATGA+AGG + Chr8:2327410-2327429 MsG0880042001.01.T01:CDS 35.0%
! TAATATTGGTGATCTTCTGC+AGG + Chr8:2328728-2328747 MsG0880042001.01.T01:CDS 35.0%
!! GGATACTTTTGCTTGTTACT+TGG + Chr8:2327784-2327803 MsG0880042001.01.T01:CDS 35.0%
!! GGTGAAAAGGTTTTATGAAC+TGG + Chr8:2327661-2327680 MsG0880042001.01.T01:CDS 35.0%
AAATGCATACTTTCGTGGAG+AGG + Chr8:2328147-2328166 MsG0880042001.01.T01:intron 40.0%
ATATCTGCAAGGTCTATGAC+AGG - Chr8:2327512-2327531 None:intergenic 40.0%
ATGCAGCACGTAAACATACA+CGG - Chr8:2327977-2327996 None:intergenic 40.0%
CATTCTGATTGCTCAACAAG+TGG - Chr8:2328812-2328831 None:intergenic 40.0%
CTTCTACAAGACCATATTGG+TGG + Chr8:2328642-2328661 MsG0880042001.01.T01:CDS 40.0%
GGTCTATGACAGGAATAACA+TGG - Chr8:2327502-2327521 None:intergenic 40.0%
GGTTGACAATGGAATATCTC+AGG - Chr8:2327449-2327468 None:intergenic 40.0%
GTGCTTCTACAAGACCATAT+TGG + Chr8:2328639-2328658 MsG0880042001.01.T01:CDS 40.0%
! CCATTTTCGCTAAAAATCGG+AGG + Chr8:2328293-2328312 MsG0880042001.01.T01:intron 40.0%
!! AATTCTGGTTCAGGACAAGA+AGG - Chr8:2328576-2328595 None:intergenic 40.0%
!! GAAGCACTGTGAGAAAACTA+TGG - Chr8:2328626-2328645 None:intergenic 40.0%
!!! CCTCCGATTTTTAGCGAAAA+TGG - Chr8:2328296-2328315 None:intergenic 40.0%
AAGAGATTCCTGTGGTATGC+AGG + Chr8:2327831-2327850 MsG0880042001.01.T01:CDS 45.0%
AGGGATAGTCGAGAAAGTCA+AGG + Chr8:2327559-2327578 MsG0880042001.01.T01:CDS 45.0%
CATACCACAGGAATCTCTTC+TGG - Chr8:2327830-2327849 None:intergenic 45.0%
CCTGAACCAGAATTGACTGT+GGG + Chr8:2328582-2328601 MsG0880042001.01.T01:CDS 45.0%
CTTATCTCTTGGACAGACTC+AGG + Chr8:2328260-2328279 MsG0880042001.01.T01:intron 45.0%
GTTAGGCATGGTTGTATCAG+TGG - Chr8:2327339-2327358 None:intergenic 45.0%
TACTAGTACCTGCATACCAC+AGG - Chr8:2327842-2327861 None:intergenic 45.0%
TCCTGAACCAGAATTGACTG+TGG + Chr8:2328581-2328600 MsG0880042001.01.T01:CDS 45.0%
TGACTTTCTCGACTATCCCT+TGG - Chr8:2327559-2327578 None:intergenic 45.0%
!! TCTTCTGGCTTGAGAGTATC+AGG - Chr8:2327815-2327834 None:intergenic 45.0%
ACTATGAGAGCTCCAGGTAC+AGG - Chr8:2328708-2328727 None:intergenic 50.0%
ATAGCCCACCAGCACTCAAT+TGG + Chr8:2327759-2327778 MsG0880042001.01.T01:CDS 50.0%
CAAGCCAGAAGAGATTCCTG+TGG + Chr8:2327823-2327842 MsG0880042001.01.T01:CDS 50.0%
GAACTTGGAGGCCACCAATA+TGG - Chr8:2328656-2328675 None:intergenic 50.0%
GCTGTTCCCACAGTCAATTC+TGG - Chr8:2328591-2328610 None:intergenic 50.0%
GTATCCCTCCAATTGAGTGC+TGG - Chr8:2327770-2327789 None:intergenic 50.0%
!! CCCACAGTCAATTCTGGTTC+AGG - Chr8:2328585-2328604 None:intergenic 50.0%
!! TCTGGCTTGAGAGTATCAGG+TGG - Chr8:2327812-2327831 None:intergenic 50.0%
CCCACCAGCACTCAATTGGA+GGG + Chr8:2327763-2327782 MsG0880042001.01.T01:CDS 55.0%
!! CCCTCCAATTGAGTGCTGGT+GGG - Chr8:2327766-2327785 None:intergenic 55.0%
!! TCCCTCCAATTGAGTGCTGG+TGG - Chr8:2327767-2327786 None:intergenic 55.0%
GCCCACCAGCACTCAATTGG+AGG + Chr8:2327762-2327781 MsG0880042001.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2327278 2328848 2327278 ID=MsG0880042001.01;Name=MsG0880042001.01
Chr8 mRNA 2327278 2328848 2327278 ID=MsG0880042001.01.T01;Parent=MsG0880042001.01;Name=MsG0880042001.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|2|0|331
Chr8 exon 2327278 2327852 2327278 ID=MsG0880042001.01.T01:exon:1795;Parent=MsG0880042001.01.T01
Chr8 exon 2328428 2328848 2328428 ID=MsG0880042001.01.T01:exon:1796;Parent=MsG0880042001.01.T01
Chr8 CDS 2327278 2327852 2327278 ID=MsG0880042001.01.T01:cds;Parent=MsG0880042001.01.T01
Chr8 CDS 2328428 2328848 2328428 ID=MsG0880042001.01.T01:cds;Parent=MsG0880042001.01.T01
Gene Sequence

>MsG0880042001.01.T01

CTGTTGCTACTTCTACTCACTCCAGAACCACTACATACAAGTATAAGAAATATGGGAACCACTGATACAACCATGCCTAACCTTGATTCTATAATGAATGAACGCAAAGCATTTGATGAAACAAAATCTGGTGTGAAAGGAATTGTTGATGAAGGACTTAAAAGGATACCTGAGATATTCCATTGTCAACCTGATAAATATGAGAAAGCCAACAACACAAGCCATGTTATTCCTGTCATAGACCTTGCAGATATTGATCATAAAGATTCAAGCATTCACCAAGGGATAGTCGAGAAAGTCAAGGAAGCATGTGAAACATTAGGTTTTTTTCAGGTTGTTAATCATGGAATCCCTTTGAGTATTCTTGAGGATTTGAAAGATGGGGTGAAAAGGTTTTATGAACTGGACACAGAAGTCAAAAAAGATTTTTATACAAGAGATATGCAGAGATCCTTTATTTACAATAGCAATTATGATATTTATAGCCCACCAGCACTCAATTGGAGGGATACTTTTGCTTGTTACTTGGCTCCACCTGATACTCTCAAGCCAGAAGAGATTCCTGTGGTATGCAGAGATATACTGCTAGAATATGGAAAACACATGATGAATCTTGGAACTTTACTGTTTGAATTGTTATCAGAAGCTTTAGGTCTGAGTCCAAATCATCTAAAAGATATGGATTGTGCTCAAGGGCTATTTGCTCTTTGCCATTATTATCCTTCTTGTCCTGAACCAGAATTGACTGTGGGAACAGCCAAGCATTCAGACCATAGTTTTCTCACAGTGCTTCTACAAGACCATATTGGTGGCCTCCAAGTTCTTTGTAAAGATAAATGGATTGATATAACACCTGTACCTGGAGCTCTCATAGTTAATATTGGTGATCTTCTGCAGGCAAGTTTTCTGTGTCCTTATGTGTATAGTTTCCATTATGAAAGAAAAAAATTAAAATGCCACTTGTTGAGCAATCAGAATGTGTCCCATACTAACTAA

Protein sequence

>MsG0880042001.01.T01

LLLLLLTPEPLHTSIRNMGTTDTTMPNLDSIMNERKAFDETKSGVKGIVDEGLKRIPEIFHCQPDKYEKANNTSHVIPVIDLADIDHKDSSIHQGIVEKVKEACETLGFFQVVNHGIPLSILEDLKDGVKRFYELDTEVKKDFYTRDMQRSFIYNSNYDIYSPPALNWRDTFACYLAPPDTLKPEEIPVVCRDILLEYGKHMMNLGTLLFELLSEALGLSPNHLKDMDCAQGLFALCHYYPSCPEPELTVGTAKHSDHSFLTVLLQDHIGGLQVLCKDKWIDITPVPGALIVNIGDLLQASFLCPYVYSFHYERKKLKCHLLSNQNVSHTN*