AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014869.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014869.01.T01 MTR_3g465430 97.730 925 21 0 1 925 1 925 0.0 1873
MsG0380014869.01.T01 MTR_4g014680 57.447 940 364 10 1 922 9 930 0.0 1079
MsG0380014869.01.T01 MTR_1g071400 47.535 852 421 6 74 920 51 881 0.0 786
MsG0380014869.01.T01 MTR_1g071400 46.556 784 393 6 74 852 51 813 0.0 704
MsG0380014869.01.T01 MTR_1g071400 32.298 161 109 0 750 910 382 542 3.87e-18 90.1
MsG0380014869.01.T01 MTR_7g069700 51.935 672 296 7 1 654 9 671 0.0 672
MsG0380014869.01.T01 MTR_7g069700 72.963 270 73 0 653 922 773 1042 3.29e-131 421
MsG0380014869.01.T01 MTR_7g069700 32.338 201 132 1 385 581 830 1030 1.94e-23 107
MsG0380014869.01.T01 MTR_7g069700 30.978 184 127 0 727 910 413 596 4.18e-20 97.1
MsG0380014869.01.T01 MTR_1g071400 42.962 682 363 6 74 750 51 711 0.0 553
MsG0380014869.01.T01 MTR_1g071400 32.298 161 109 0 750 910 382 542 1.34e-18 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014869.01.T01 AT3G51770 63.036 863 316 3 62 924 89 948 0.0 1150
MsG0380014869.01.T01 AT3G51770 63.036 863 316 3 62 924 97 956 0.0 1150
MsG0380014869.01.T01 AT5G58550 56.587 926 378 7 1 919 1 909 0.0 1033
MsG0380014869.01.T01 AT4G02680 48.531 851 416 5 74 920 51 883 0.0 783

Find 174 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAATTTACTTGTGTTTA+TGG 0.033003 3:+61720791 MsG0380014869.01.T01:three_prime_UTR
CAACACACCTTGATCCTTTA+AGG 0.060854 3:+61720090 MsG0380014869.01.T01:CDS
CTACAAGGTTGATTGGTTTA+AGG 0.146095 3:-61717419 None:intergenic
AAGGAAAAGTTGGAAAATTT+AGG 0.184841 3:+61718287 MsG0380014869.01.T01:CDS
CCAAAGATGAATTTGGAAAA+TGG 0.201041 3:+61717705 MsG0380014869.01.T01:CDS
GCAAATAAAGGAAGGGATTA+TGG 0.210325 3:+61718766 MsG0380014869.01.T01:CDS
TGAATGTCCAAAGATGAATT+TGG 0.225359 3:+61717698 MsG0380014869.01.T01:CDS
TACAATATGGGAAGAGAAAA+AGG 0.232145 3:+61718659 MsG0380014869.01.T01:CDS
TCCAATGCTCTATATTTATA+CGG 0.234438 3:-61718728 None:intergenic
CAGTGATCATTAATTGAAAA+AGG 0.250740 3:-61717735 None:intergenic
CGTTGATGATGTTGGTTCTT+TGG 0.260043 3:+61719036 MsG0380014869.01.T01:CDS
ATCTTCTTGTGATTCTCATT+TGG 0.274382 3:+61718100 MsG0380014869.01.T01:CDS
ATGGAGTTAGATAAGTTTCT+AGG 0.286460 3:+61718785 MsG0380014869.01.T01:CDS
GCATTGATACTTATTGAGTA+TGG 0.289441 3:+61718149 MsG0380014869.01.T01:CDS
ATTAACTTATAAGCCGAATA+TGG 0.292646 3:-61718578 None:intergenic
AGGAAAAGTTGGAAAATTTA+GGG 0.292799 3:+61718288 MsG0380014869.01.T01:CDS
CCTGCTGCCCTGTATCTATA+AGG 0.297319 3:-61720119 None:intergenic
TATCAGTACTTGCGAGTTAC+TGG 0.297812 3:-61721047 None:intergenic
TGTGTTTATGGTATCAAATA+TGG 0.301814 3:+61720803 MsG0380014869.01.T01:three_prime_UTR
CTATAAGGGTATGTCCTTAA+AGG 0.309106 3:-61720104 None:intergenic
AGTCTTGCATTGCATCAATT+AGG 0.317285 3:+61718434 MsG0380014869.01.T01:CDS
AGAGAGAGCATTGTACAATA+TGG 0.319911 3:+61718646 MsG0380014869.01.T01:CDS
CAAGACTAATTAGGTGAATA+TGG 0.324403 3:-61720914 None:intergenic
TAAAGAGTGCAAGACTAATT+AGG 0.326408 3:-61720923 None:intergenic
TTCGATGAAGCAGTTGAATT+AGG 0.336536 3:+61718503 MsG0380014869.01.T01:CDS
ACAACAATGCACTTGCAATT+AGG 0.349845 3:+61719895 MsG0380014869.01.T01:CDS
ACCTGATTGTTTAGAGTTGA+GGG 0.350604 3:+61718820 MsG0380014869.01.T01:CDS
CAAAGATGAATTTGGAAAAT+GGG 0.350696 3:+61717706 MsG0380014869.01.T01:CDS
GAAAATAAATTATGCATTGT+AGG 0.356131 3:-61721003 None:intergenic
TCTCATTTGGCTTCAATTGT+TGG 0.360828 3:+61718113 MsG0380014869.01.T01:CDS
AACTCTAGCAGGCTCTTTCC+AGG 0.361101 3:-61719088 None:intergenic
TTAAGGTAAGGTTCTATAGA+TGG 0.365386 3:-61717402 None:intergenic
AGTTATGTAATTAGCCTCTA+TGG 0.365662 3:-61718906 None:intergenic
AATATGAACCTTTGAGAAAA+GGG 0.369712 3:-61717073 None:intergenic
ATAACATAAGAAGAAGATTC+AGG 0.375878 3:-61719672 None:intergenic
AGCTTCTGTCATTTGCCAAT+AGG 0.381135 3:+61718057 MsG0380014869.01.T01:CDS
AAATGATTTCTGAATTTCAA+TGG 0.382753 3:-61719601 None:intergenic
GTCTTGCATTGCATCAATTA+GGG 0.383554 3:+61718435 MsG0380014869.01.T01:CDS
AGTTCTTCATCTGAAACTAA+TGG 0.389641 3:+61717234 MsG0380014869.01.T01:CDS
TTTGAATTATGAAGCGAATT+CGG 0.390936 3:-61718233 None:intergenic
TAAACAAGGTCAACCATATT+CGG 0.393755 3:+61718565 MsG0380014869.01.T01:CDS
TCTGTTAAGGTTGTGAGGTT+TGG 0.394276 3:-61717268 None:intergenic
AGAAGCTCTAAAACAGTATT+GGG 0.396365 3:-61718041 None:intergenic
CACCTGATTGTTTAGAGTTG+AGG 0.398050 3:+61718819 MsG0380014869.01.T01:CDS
AAGAAATCAAGTGTGTTAGA+AGG 0.403139 3:+61717859 MsG0380014869.01.T01:CDS
AAAGTCTCTACAAGGTTGAT+TGG 0.404114 3:-61717426 None:intergenic
TTTGAATGAAAATAAACTTA+AGG 0.408591 3:-61717101 None:intergenic
TGCAATGCGCAGTTTGCGGC+TGG 0.409116 3:+61719476 MsG0380014869.01.T01:CDS
AAATATGAACCTTTGAGAAA+AGG 0.411072 3:-61717074 None:intergenic
CAACAGTATGTATATACATT+TGG 0.411817 3:+61720859 MsG0380014869.01.T01:three_prime_UTR
AGTCGAGGAGAAGCAAATAA+AGG 0.422463 3:+61718754 MsG0380014869.01.T01:CDS
GACATCTTCTGAGTAGCTTC+TGG 0.426439 3:-61717545 None:intergenic
CAGAAGCTCTAAAACAGTAT+TGG 0.429864 3:-61718042 None:intergenic
ATATTGTTCTGTGTCTGTTA+AGG 0.430267 3:-61717281 None:intergenic
GTTCAACACTTTAGCTCAAA+GGG 0.431636 3:+61717124 MsG0380014869.01.T01:five_prime_UTR
TAGAATTCAGAAGAAGAATC+AGG 0.435527 3:+61718976 MsG0380014869.01.T01:CDS
GAGGATCAAAGGTGAATGTT+TGG 0.435726 3:+61718937 MsG0380014869.01.T01:CDS
GGACATACCCTTATAGATAC+AGG 0.436012 3:+61720111 MsG0380014869.01.T01:CDS
GGCCATGTTTATTCCATAGC+AGG 0.437661 3:+61718524 MsG0380014869.01.T01:CDS
ACTTGTTGGTGTTTGTTCAA+TGG 0.438005 3:+61717653 MsG0380014869.01.T01:CDS
CTCCTCACAACAAAACCTAT+TGG 0.438977 3:-61718072 None:intergenic
AGATGAAGCATTTGAAGATC+AGG 0.440910 3:-61720578 None:intergenic
AGGCTGCAATGCGCAGTTTG+CGG 0.457525 3:+61719472 MsG0380014869.01.T01:CDS
ATTGTTTAGAGTTGAGGGCT+TGG 0.457835 3:+61718825 MsG0380014869.01.T01:CDS
GGATGGATTCTATACGATAC+TGG 0.458073 3:+61719543 MsG0380014869.01.T01:CDS
CCACAAAGCATTGCATTCAA+TGG 0.458652 3:-61717903 None:intergenic
TATAAAGAGATTCATACCTC+TGG 0.467553 3:+61720977 MsG0380014869.01.T01:three_prime_UTR
GAAAACAACAGCGATGTTGT+TGG 0.467904 3:+61718373 MsG0380014869.01.T01:CDS
GCTAATTACATAACTTTACA+TGG 0.469791 3:+61718914 MsG0380014869.01.T01:CDS
CATGGTTGAGGTTTGAAAGA+AGG 0.469985 3:+61717622 MsG0380014869.01.T01:CDS
TAGAGCTTTGTTAACCATAG+AGG 0.473166 3:+61718892 MsG0380014869.01.T01:CDS
AGGTTGATTGGTTTAAGGTA+AGG 0.473641 3:-61717414 None:intergenic
TGTTCTAGCCACACCTGCTA+TGG 0.476036 3:-61718537 None:intergenic
GCCCTCAACTCTAAACAATC+AGG 0.478669 3:-61718821 None:intergenic
AGAAGAATCAGGCTGATTGT+TGG 0.481618 3:+61718987 MsG0380014869.01.T01:CDS
GAGAGAGCATTGTACAATAT+GGG 0.482919 3:+61718647 MsG0380014869.01.T01:CDS
TTGTGTTGTCTGCATGGTTG+AGG 0.483992 3:+61717610 MsG0380014869.01.T01:CDS
CTGCTGCCCTGTATCTATAA+GGG 0.484423 3:-61720118 None:intergenic
TGTAACTTGTATAACTGATC+AGG 0.484904 3:-61716770 None:intergenic
CACAAGAGCTCATCAAGGTC+TGG 0.485931 3:+61719920 MsG0380014869.01.T01:CDS
TGCCACTTTCTGAGCATAGC+AGG 0.489263 3:+61716743 MsG0380014869.01.T01:five_prime_UTR
TAACATGGGGAGTATTTATG+TGG 0.495928 3:+61719839 MsG0380014869.01.T01:CDS
GATACTTATTGAGTATGGAT+TGG 0.496423 3:+61718154 MsG0380014869.01.T01:CDS
AGAGGCTAATTTATGAAGGA+TGG 0.497913 3:+61719526 MsG0380014869.01.T01:CDS
TCTCCTGCATTGAGGTGGAA+TGG 0.502258 3:-61719506 None:intergenic
CCATTGAATGCAATGCTTTG+TGG 0.503790 3:+61717903 MsG0380014869.01.T01:CDS
TGGATGAATCAGAAGAAAGA+TGG 0.506866 3:+61720764 MsG0380014869.01.T01:three_prime_UTR
AGTTCAACACTTTAGCTCAA+AGG 0.506973 3:+61717123 MsG0380014869.01.T01:five_prime_UTR
CAGATGCTAGAGAATGAGCC+TGG 0.507226 3:+61719070 MsG0380014869.01.T01:CDS
GACAATGCTGATTGAGAAAG+CGG 0.508703 3:+61719992 MsG0380014869.01.T01:CDS
CATCAACGGAAGACCATTGT+TGG 0.513844 3:-61719021 None:intergenic
AGCAGTAGAAGAACTCACTA+AGG 0.514403 3:+61720541 MsG0380014869.01.T01:CDS
TCCGTATAAATATAGAGCAT+TGG 0.515494 3:+61718727 MsG0380014869.01.T01:CDS
CTAAAGATGCTTACCTCAAG+AGG 0.517512 3:-61719126 None:intergenic
TCAAAGGGTTGTTAGAAAAG+TGG 0.520316 3:+61717139 MsG0380014869.01.T01:five_prime_UTR
CAAAGGTTGTGTTGTCTGCA+TGG 0.521375 3:+61717604 MsG0380014869.01.T01:CDS
GCTCAGATTAAACTGTCAAA+AGG 0.528581 3:+61719452 MsG0380014869.01.T01:intron
AAGAGTGTGCTGCAGAGAAA+TGG 0.531402 3:+61718405 MsG0380014869.01.T01:CDS
GTCTGTCTCTACTCCTCTTG+AGG 0.531969 3:+61719113 MsG0380014869.01.T01:CDS
AACAAGATTTGCAAATTCTG+AGG 0.534851 3:-61717346 None:intergenic
GACACAGAACAATATTGTCT+TGG 0.535289 3:+61717289 MsG0380014869.01.T01:CDS
ACTTTACATGGGAGGATCAA+AGG 0.539277 3:+61718926 MsG0380014869.01.T01:CDS
TACATTTGGTATATATGATG+TGG 0.539465 3:+61720873 MsG0380014869.01.T01:three_prime_UTR
GGTAATGGATTATGTTCAGA+AGG 0.539973 3:+61717966 MsG0380014869.01.T01:CDS
AAACCATTCCACCTCAATGC+AGG 0.545159 3:+61719503 MsG0380014869.01.T01:CDS
GGTATGTCCTTAAAGGATCA+AGG 0.546574 3:-61720097 None:intergenic
CCTTATAGATACAGGGCAGC+AGG 0.549665 3:+61720119 MsG0380014869.01.T01:CDS
TTTGCAGGCATTGAATAACA+TGG 0.549951 3:+61719824 MsG0380014869.01.T01:intron
TTGCAGGCATTGAATAACAT+GGG 0.554480 3:+61719825 MsG0380014869.01.T01:intron
CAGGAGAGGCTAATTTATGA+AGG 0.554998 3:+61719522 MsG0380014869.01.T01:CDS
GGTTCAATAGTGTCAGTTGA+AGG 0.555143 3:-61717381 None:intergenic
ATCGTGACGAGGCTGTTACA+AGG 0.556551 3:+61719568 MsG0380014869.01.T01:CDS
GCATATATGACTAGTGCTGA+TGG 0.557153 3:+61720499 MsG0380014869.01.T01:intron
TCAAGTGTGGCTGCATGGGT+TGG 0.559007 3:-61720677 None:intergenic
ATGTAATGTAACTGTACAAG+AGG 0.565524 3:-61720951 None:intergenic
TAAATCAAGTGTGGCTGCAT+GGG 0.565537 3:-61720681 None:intergenic
GGTGTTTGTTCAATGGATTG+TGG 0.568555 3:+61717660 MsG0380014869.01.T01:CDS
GAGACAGACGAAACTCTAGC+AGG 0.568951 3:-61719099 None:intergenic
CTGTGTCTGTTAAGGTTGTG+AGG 0.570139 3:-61717273 None:intergenic
TGTTTATTCCATAGCAGGTG+TGG 0.573947 3:+61718529 MsG0380014869.01.T01:CDS
AAACTCAAGAAGCTATACAT+TGG 0.574044 3:+61720744 MsG0380014869.01.T01:three_prime_UTR
CCACACTTGATTTATGTCAA+AGG 0.574409 3:+61720690 MsG0380014869.01.T01:CDS
ATGGTTGAGGTTTGAAAGAA+GGG 0.578755 3:+61717623 MsG0380014869.01.T01:CDS
GGGAGTATTTATGTGGATTG+TGG 0.580648 3:+61719846 MsG0380014869.01.T01:CDS
GAGGAGAAGCAAATAAAGGA+AGG 0.581506 3:+61718758 MsG0380014869.01.T01:CDS
GAATTCGCTTCATAATTCAA+AGG 0.583357 3:+61718235 MsG0380014869.01.T01:CDS
GTGTGTTTGTTTGTCTGATG+AGG 0.586309 3:+61717806 MsG0380014869.01.T01:CDS
AGAATACTGTGATCGTGAGA+TGG 0.587940 3:+61720046 MsG0380014869.01.T01:CDS
TCTTGATACATCCAACCGAC+TGG 0.590177 3:-61718626 None:intergenic
TCGAGTATAAACCAGTCGGT+TGG 0.595194 3:+61718615 MsG0380014869.01.T01:CDS
TGGTCTTCCGTTGATGATGT+TGG 0.597719 3:+61719028 MsG0380014869.01.T01:CDS
AATGATGAATGATCTGAACT+TGG 0.598053 3:-61716943 None:intergenic
CGCGGAAGATGTGATGTCAA+AGG 0.599465 3:+61717587 MsG0380014869.01.T01:CDS
TCGTGACGAGGCTGTTACAA+GGG 0.600278 3:+61719569 MsG0380014869.01.T01:CDS
TAGCCTCTCCTGCATTGAGG+TGG 0.600521 3:-61719511 None:intergenic
TTGAATGCAATGCTTTGTGG+TGG 0.602718 3:+61717906 MsG0380014869.01.T01:CDS
AATTAGCCTCTCCTGCATTG+AGG 0.603715 3:-61719514 None:intergenic
CCTTTGCGAAGTCCGTCTGA+AGG 0.604404 3:-61719723 None:intergenic
GGTGGCAATGGAAGAAAGCA+TGG 0.605072 3:+61718346 MsG0380014869.01.T01:CDS
GGATGCAATTATACCAACAA+TGG 0.606647 3:+61719008 MsG0380014869.01.T01:CDS
ATAAATCAAGTGTGGCTGCA+TGG 0.607359 3:-61720682 None:intergenic
AACCTGCTATGCTCAGAAAG+TGG 0.607602 3:-61716745 None:intergenic
TGGTAAAATAGAACTTGCAA+AGG 0.609009 3:+61719866 MsG0380014869.01.T01:CDS
GTTTGTTCAATGGATTGTGG+TGG 0.609723 3:+61717663 MsG0380014869.01.T01:CDS
TAGAGCATTGGAGAAAGTCG+AGG 0.609855 3:+61718739 MsG0380014869.01.T01:CDS
CACCTGCTATGGAATAAACA+TGG 0.610888 3:-61718526 None:intergenic
ATTACATAACTTTACATGGG+AGG 0.612020 3:+61718918 MsG0380014869.01.T01:CDS
AGAAGGGATGATGAACTTGT+TGG 0.612740 3:+61717639 MsG0380014869.01.T01:CDS
GAAAGCGGAAAGTAATGCCT+CGG 0.613020 3:+61720007 MsG0380014869.01.T01:CDS
GATTTCTAGAATCCAAAATG+TGG 0.618681 3:+61717928 MsG0380014869.01.T01:CDS
GACATACCCTTATAGATACA+GGG 0.619740 3:+61720112 MsG0380014869.01.T01:CDS
TGCAGGCATTGAATAACATG+GGG 0.620435 3:+61719826 MsG0380014869.01.T01:intron
TGATCGTTTCTCATATGCCG+AGG 0.627833 3:-61720024 None:intergenic
CTTTAGCAGAACTCTATCAA+CGG 0.629968 3:+61717445 MsG0380014869.01.T01:CDS
AGCTTGACAATCTTTAAGAG+CGG 0.633769 3:-61720639 None:intergenic
CTAATTACATAACTTTACAT+GGG 0.634474 3:+61718915 MsG0380014869.01.T01:CDS
TTATACGGAAATGAAAGTGA+AGG 0.637799 3:-61718713 None:intergenic
CAAAGAACCAACATCATCAA+CGG 0.639146 3:-61719035 None:intergenic
AGGCACACAAGAGCTCATCA+AGG 0.640321 3:+61719915 MsG0380014869.01.T01:CDS
TAGAAATGCGCGGCAGAACG+CGG 0.641816 3:+61717569 MsG0380014869.01.T01:CDS
GTTTATGGTATCAAATATGG+AGG 0.642443 3:+61720806 MsG0380014869.01.T01:three_prime_UTR
GTTCTGCTAAAGTCTCTACA+AGG 0.642685 3:-61717434 None:intergenic
GCACTTACATGTCCTTCAGA+CGG 0.644156 3:+61719711 MsG0380014869.01.T01:CDS
GAAGATGTCTTAGAAATGCG+CGG 0.652556 3:+61717559 MsG0380014869.01.T01:CDS
CCTTCAGACGGACTTCGCAA+AGG 0.656665 3:+61719723 MsG0380014869.01.T01:CDS
CCTTTGACATAAATCAAGTG+TGG 0.657714 3:-61720690 None:intergenic
CGATACTGGCTATCGTGACG+AGG 0.657764 3:+61719557 MsG0380014869.01.T01:CDS
ATTCCACCTCAATGCAGGAG+AGG 0.663137 3:+61719508 MsG0380014869.01.T01:CDS
AGGAGAAGCAAATAAAGGAA+GGG 0.664981 3:+61718759 MsG0380014869.01.T01:CDS
CTGTGATCGTGAGATGGCGA+AGG 0.680984 3:+61720052 MsG0380014869.01.T01:CDS
TATGCATTGTAGGAAACCAG+AGG 0.694031 3:-61720993 None:intergenic
GCTAGAACAAAGCATAAACA+AGG 0.694172 3:+61718551 MsG0380014869.01.T01:CDS
TCCCATTGACTCGTAAAACG+CGG 0.712479 3:-61720606 None:intergenic
ATATTCGAGTATAAACCAGT+CGG 0.714478 3:+61718611 MsG0380014869.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGAATGAAAATAAACTTA+AGG - Chr3:61717104-61717123 None:intergenic 15.0%
!!! ATGTAATAATAGTATGTTTT+TGG - Chr3:61716873-61716892 None:intergenic 15.0%
!!! TGATAAACGATTATTTTATA+AGG - Chr3:61720189-61720208 None:intergenic 15.0%
!! AAATGATTTCTGAATTTCAA+TGG - Chr3:61719604-61719623 None:intergenic 20.0%
!! ATAATAATCGCTTATTTCAA+AGG - Chr3:61720463-61720482 None:intergenic 20.0%
!! CAAAGAATGATATGAAAAAT+TGG - Chr3:61716847-61716866 None:intergenic 20.0%
!! CTAATTACATAACTTTACAT+GGG + Chr3:61718915-61718934 MsG0380014869.01.T01:CDS 20.0%
!! CTACAACAAAATATAAAAGA+AGG + Chr3:61720223-61720242 MsG0380014869.01.T01:intron 20.0%
!! GAAAATAAATTATGCATTGT+AGG - Chr3:61721006-61721025 None:intergenic 20.0%
!! TAGAAATTTACTTGTGTTTA+TGG + Chr3:61720791-61720810 MsG0380014869.01.T01:three_prime_UTR 20.0%
!!! AAAATCAATTTTCCACATTT+TGG - Chr3:61717943-61717962 None:intergenic 20.0%
!!! AAAATTGATTTTTCAGGTAA+TGG + Chr3:61717951-61717970 MsG0380014869.01.T01:CDS 20.0%
!!! AAGCTATCTTGAAAATTTTA+TGG + Chr3:61720283-61720302 MsG0380014869.01.T01:intron 20.0%
! AAGGAAAAGTTGGAAAATTT+AGG + Chr3:61718287-61718306 MsG0380014869.01.T01:CDS 25.0%
! AGGAAAAGTTGGAAAATTTA+GGG + Chr3:61718288-61718307 MsG0380014869.01.T01:CDS 25.0%
! ATAACATAAGAAGAAGATTC+AGG - Chr3:61719675-61719694 None:intergenic 25.0%
! ATTAACTTATAAGCCGAATA+TGG - Chr3:61718581-61718600 None:intergenic 25.0%
! CAAAGATGAATTTGGAAAAT+GGG + Chr3:61717706-61717725 MsG0380014869.01.T01:CDS 25.0%
! CAACAGTATGTATATACATT+TGG + Chr3:61720859-61720878 MsG0380014869.01.T01:three_prime_UTR 25.0%
! CAGTGATCATTAATTGAAAA+AGG - Chr3:61717738-61717757 None:intergenic 25.0%
! GCTAATTACATAACTTTACA+TGG + Chr3:61718914-61718933 MsG0380014869.01.T01:CDS 25.0%
! TACATTTGGTATATATGATG+TGG + Chr3:61720873-61720892 MsG0380014869.01.T01:three_prime_UTR 25.0%
! TAGGTCAAAATTGAAAGATT+AGG - Chr3:61719177-61719196 None:intergenic 25.0%
! TCCAATGCTCTATATTTATA+CGG - Chr3:61718731-61718750 None:intergenic 25.0%
! TGTGTTTATGGTATCAAATA+TGG + Chr3:61720803-61720822 MsG0380014869.01.T01:three_prime_UTR 25.0%
! TTTGAATTATGAAGCGAATT+CGG - Chr3:61718236-61718255 None:intergenic 25.0%
!! AAATATGAACCTTTGAGAAA+AGG - Chr3:61717077-61717096 None:intergenic 25.0%
!! AATATGAACCTTTGAGAAAA+GGG - Chr3:61717076-61717095 None:intergenic 25.0%
!!! AAGAGAAAAAGGTTTTGATT+TGG + Chr3:61718670-61718689 MsG0380014869.01.T01:CDS 25.0%
!!! ATGTGGAAAATTGATTTTTC+AGG + Chr3:61717945-61717964 MsG0380014869.01.T01:CDS 25.0%
AAACTCAAGAAGCTATACAT+TGG + Chr3:61720744-61720763 MsG0380014869.01.T01:three_prime_UTR 30.0%
AACAAGATTTGCAAATTCTG+AGG - Chr3:61717349-61717368 None:intergenic 30.0%
AAGAAATCAAGTGTGTTAGA+AGG + Chr3:61717859-61717878 MsG0380014869.01.T01:CDS 30.0%
AATGATGAATGATCTGAACT+TGG - Chr3:61716946-61716965 None:intergenic 30.0%
ATATTCGAGTATAAACCAGT+CGG + Chr3:61718611-61718630 MsG0380014869.01.T01:CDS 30.0%
ATATTGTTCTGTGTCTGTTA+AGG - Chr3:61717284-61717303 None:intergenic 30.0%
ATCTTCTTGTGATTCTCATT+TGG + Chr3:61718100-61718119 MsG0380014869.01.T01:CDS 30.0%
ATGGAGTTAGATAAGTTTCT+AGG + Chr3:61718785-61718804 MsG0380014869.01.T01:CDS 30.0%
ATGTAATGTAACTGTACAAG+AGG - Chr3:61720954-61720973 None:intergenic 30.0%
ATTACATAACTTTACATGGG+AGG + Chr3:61718918-61718937 MsG0380014869.01.T01:CDS 30.0%
CAAGACTAATTAGGTGAATA+TGG - Chr3:61720917-61720936 None:intergenic 30.0%
CCAAAGATGAATTTGGAAAA+TGG + Chr3:61717705-61717724 MsG0380014869.01.T01:CDS 30.0%
GAATTCGCTTCATAATTCAA+AGG + Chr3:61718235-61718254 MsG0380014869.01.T01:CDS 30.0%
GATACTTATTGAGTATGGAT+TGG + Chr3:61718154-61718173 MsG0380014869.01.T01:CDS 30.0%
GTTTATGGTATCAAATATGG+AGG + Chr3:61720806-61720825 MsG0380014869.01.T01:three_prime_UTR 30.0%
TAAACAAGGTCAACCATATT+CGG + Chr3:61718565-61718584 MsG0380014869.01.T01:CDS 30.0%
TACAATATGGGAAGAGAAAA+AGG + Chr3:61718659-61718678 MsG0380014869.01.T01:CDS 30.0%
TAGAATTCAGAAGAAGAATC+AGG + Chr3:61718976-61718995 MsG0380014869.01.T01:CDS 30.0%
TATAAAGAGATTCATACCTC+TGG + Chr3:61720977-61720996 MsG0380014869.01.T01:three_prime_UTR 30.0%
TCATCAGAAAAATCAACGAA+AGG + Chr3:61719953-61719972 MsG0380014869.01.T01:CDS 30.0%
TCCGTATAAATATAGAGCAT+TGG + Chr3:61718727-61718746 MsG0380014869.01.T01:CDS 30.0%
TGAATGTCCAAAGATGAATT+TGG + Chr3:61717698-61717717 MsG0380014869.01.T01:CDS 30.0%
TGGTAAAATAGAACTTGCAA+AGG + Chr3:61719866-61719885 MsG0380014869.01.T01:CDS 30.0%
TTAAGGTAAGGTTCTATAGA+TGG - Chr3:61717405-61717424 None:intergenic 30.0%
TTACAGCAGAACAAAAAGAT+TGG + Chr3:61718007-61718026 MsG0380014869.01.T01:CDS 30.0%
TTATACGGAAATGAAAGTGA+AGG - Chr3:61718716-61718735 None:intergenic 30.0%
! AATGAAAACCCTTTTCTCAA+AGG + Chr3:61717065-61717084 MsG0380014869.01.T01:five_prime_UTR 30.0%
! AGTTATGTAATTAGCCTCTA+TGG - Chr3:61718909-61718928 None:intergenic 30.0%
! AGTTCTTCATCTGAAACTAA+TGG + Chr3:61717234-61717253 MsG0380014869.01.T01:CDS 30.0%
! CCATTTTCCAAATTCATCTT+TGG - Chr3:61717708-61717727 None:intergenic 30.0%
! GAACTTTTCTCTGTTTTGTA+TGG + Chr3:61717513-61717532 MsG0380014869.01.T01:CDS 30.0%
! GCATTGATACTTATTGAGTA+TGG + Chr3:61718149-61718168 MsG0380014869.01.T01:CDS 30.0%
! TAAAGAGTGCAAGACTAATT+AGG - Chr3:61720926-61720945 None:intergenic 30.0%
! TGTAACTTGTATAACTGATC+AGG - Chr3:61716773-61716792 None:intergenic 30.0%
! TTGCTTGCAAATTTTTCTCA+GGG + Chr3:61718205-61718224 MsG0380014869.01.T01:CDS 30.0%
!! AGAAGCTCTAAAACAGTATT+GGG - Chr3:61718044-61718063 None:intergenic 30.0%
!! CACATATGCTTTTAGGAAAA+AGG - Chr3:61719631-61719650 None:intergenic 30.0%
!! GATTTCTAGAATCCAAAATG+TGG + Chr3:61717928-61717947 MsG0380014869.01.T01:CDS 30.0%
!! TTTTGAGTCAAAGGAAAAGT+TGG + Chr3:61718277-61718296 MsG0380014869.01.T01:CDS 30.0%
!!! AGCAATAAAAGTGCTTTTAC+AGG - Chr3:61716972-61716991 None:intergenic 30.0%
!!! AGTGATGTTTTGTTTTGTGT+TGG + Chr3:61717831-61717850 MsG0380014869.01.T01:CDS 30.0%
!!! CTTATGTAGTTTTGAGTCAA+AGG + Chr3:61718268-61718287 MsG0380014869.01.T01:CDS 30.0%
!!! GTGATGTTTTGTTTTGTGTT+GGG + Chr3:61717832-61717851 MsG0380014869.01.T01:CDS 30.0%
AAGCAGTTGTAAGACTTTCT+GGG - Chr3:61720362-61720381 None:intergenic 35.0%
ACAACAATGCACTTGCAATT+AGG + Chr3:61719895-61719914 MsG0380014869.01.T01:CDS 35.0%
AGAGGCTAATTTATGAAGGA+TGG + Chr3:61719526-61719545 MsG0380014869.01.T01:CDS 35.0%
AGGAGAAGCAAATAAAGGAA+GGG + Chr3:61718759-61718778 MsG0380014869.01.T01:CDS 35.0%
AGTCTTGCATTGCATCAATT+AGG + Chr3:61718434-61718453 MsG0380014869.01.T01:CDS 35.0%
ATGGTTGAGGTTTGAAAGAA+GGG + Chr3:61717623-61717642 MsG0380014869.01.T01:CDS 35.0%
ATGTGAGAGACTATTTGGAT+TGG - Chr3:61720410-61720429 None:intergenic 35.0%
CAAAGAACCAACATCATCAA+CGG - Chr3:61719038-61719057 None:intergenic 35.0%
CCACACTTGATTTATGTCAA+AGG + Chr3:61720690-61720709 MsG0380014869.01.T01:CDS 35.0%
CCTTTGACATAAATCAAGTG+TGG - Chr3:61720693-61720712 None:intergenic 35.0%
CGCGTGTTAGTAAATACAAT+TGG + Chr3:61719391-61719410 MsG0380014869.01.T01:intron 35.0%
CTTTAGCAGAACTCTATCAA+CGG + Chr3:61717445-61717464 MsG0380014869.01.T01:CDS 35.0%
GACACAGAACAATATTGTCT+TGG + Chr3:61717289-61717308 MsG0380014869.01.T01:CDS 35.0%
GACATACCCTTATAGATACA+GGG + Chr3:61720112-61720131 MsG0380014869.01.T01:CDS 35.0%
GCAAATAAAGGAAGGGATTA+TGG + Chr3:61718766-61718785 MsG0380014869.01.T01:CDS 35.0%
GCTAGAACAAAGCATAAACA+AGG + Chr3:61718551-61718570 MsG0380014869.01.T01:CDS 35.0%
GCTCAGATTAAACTGTCAAA+AGG + Chr3:61719452-61719471 MsG0380014869.01.T01:intron 35.0%
GCTTATGAACATGTTGTAAG+TGG + Chr3:61720322-61720341 MsG0380014869.01.T01:intron 35.0%
GCTTTAATCAATGTGCAGAT+AGG - Chr3:61720167-61720186 None:intergenic 35.0%
GGATGCAATTATACCAACAA+TGG + Chr3:61719008-61719027 MsG0380014869.01.T01:CDS 35.0%
GTCTTGCATTGCATCAATTA+GGG + Chr3:61718435-61718454 MsG0380014869.01.T01:CDS 35.0%
TAAGCAGTTGTAAGACTTTC+TGG - Chr3:61720363-61720382 None:intergenic 35.0%
TCAAAGGGTTGTTAGAAAAG+TGG + Chr3:61717139-61717158 MsG0380014869.01.T01:five_prime_UTR 35.0%
TCATCATGTGAGAGACTATT+TGG - Chr3:61720415-61720434 None:intergenic 35.0%
TGGATGAATCAGAAGAAAGA+TGG + Chr3:61720764-61720783 MsG0380014869.01.T01:three_prime_UTR 35.0%
TTCGATGAAGCAGTTGAATT+AGG + Chr3:61718503-61718522 MsG0380014869.01.T01:CDS 35.0%
! AAAGTCTCTACAAGGTTGAT+TGG - Chr3:61717429-61717448 None:intergenic 35.0%
! ACCTGATTGTTTAGAGTTGA+GGG + Chr3:61718820-61718839 MsG0380014869.01.T01:CDS 35.0%
! ACTTGTTGGTGTTTGTTCAA+TGG + Chr3:61717653-61717672 MsG0380014869.01.T01:CDS 35.0%
! AGATGAAGCATTTGAAGATC+AGG - Chr3:61720581-61720600 None:intergenic 35.0%
! AGCTTGACAATCTTTAAGAG+CGG - Chr3:61720642-61720661 None:intergenic 35.0%
! AGTGCTACTGCTACATATAT+AGG - Chr3:61719196-61719215 None:intergenic 35.0%
! AGTTCAACACTTTAGCTCAA+AGG + Chr3:61717123-61717142 MsG0380014869.01.T01:five_prime_UTR 35.0%
! CTATAAGGGTATGTCCTTAA+AGG - Chr3:61720107-61720126 None:intergenic 35.0%
! CTGCTAACACATATGCTTTT+AGG - Chr3:61719638-61719657 None:intergenic 35.0%
! CTTGCTTGCAAATTTTTCTC+AGG + Chr3:61718204-61718223 MsG0380014869.01.T01:CDS 35.0%
! GTTCAACACTTTAGCTCAAA+GGG + Chr3:61717124-61717143 MsG0380014869.01.T01:five_prime_UTR 35.0%
! GTTGTACTATTTTCTCAGTC+AGG + Chr3:61718325-61718344 MsG0380014869.01.T01:CDS 35.0%
! TCTCATTTGGCTTCAATTGT+TGG + Chr3:61718113-61718132 MsG0380014869.01.T01:CDS 35.0%
! TGTCTTGTGCAATATTTTGC+AGG + Chr3:61719809-61719828 MsG0380014869.01.T01:intron 35.0%
! TTCTCTGTTTTGTATGGTCT+TGG + Chr3:61717519-61717538 MsG0380014869.01.T01:CDS 35.0%
!! AGAGAGAGCATTGTACAATA+TGG + Chr3:61718646-61718665 MsG0380014869.01.T01:CDS 35.0%
!! AGGTTGATTGGTTTAAGGTA+AGG - Chr3:61717417-61717436 None:intergenic 35.0%
!! CAGAAGCTCTAAAACAGTAT+TGG - Chr3:61718045-61718064 None:intergenic 35.0%
!! CTACAAGGTTGATTGGTTTA+AGG - Chr3:61717422-61717441 None:intergenic 35.0%
!! GAGAGAGCATTGTACAATAT+GGG + Chr3:61718647-61718666 MsG0380014869.01.T01:CDS 35.0%
!! GGTAATGGATTATGTTCAGA+AGG + Chr3:61717966-61717985 MsG0380014869.01.T01:CDS 35.0%
!! TAACATGGGGAGTATTTATG+TGG + Chr3:61719839-61719858 MsG0380014869.01.T01:CDS 35.0%
!! TAGAGCTTTGTTAACCATAG+AGG + Chr3:61718892-61718911 MsG0380014869.01.T01:CDS 35.0%
!! TTGCAGGCATTGAATAACAT+GGG + Chr3:61719825-61719844 MsG0380014869.01.T01:intron 35.0%
!! TTTGCAGGCATTGAATAACA+TGG + Chr3:61719824-61719843 MsG0380014869.01.T01:intron 35.0%
ACTTTACATGGGAGGATCAA+AGG + Chr3:61718926-61718945 MsG0380014869.01.T01:CDS 40.0%
AGAAGAATCAGGCTGATTGT+TGG + Chr3:61718987-61719006 MsG0380014869.01.T01:CDS 40.0%
AGAAGGGATGATGAACTTGT+TGG + Chr3:61717639-61717658 MsG0380014869.01.T01:CDS 40.0%
AGAATACTGTGATCGTGAGA+TGG + Chr3:61720046-61720065 MsG0380014869.01.T01:CDS 40.0%
AGCAGTAGAAGAACTCACTA+AGG + Chr3:61720541-61720560 MsG0380014869.01.T01:CDS 40.0%
AGTCGAGGAGAAGCAAATAA+AGG + Chr3:61718754-61718773 MsG0380014869.01.T01:CDS 40.0%
ATAAATCAAGTGTGGCTGCA+TGG - Chr3:61720685-61720704 None:intergenic 40.0%
CAACACACCTTGATCCTTTA+AGG + Chr3:61720090-61720109 MsG0380014869.01.T01:CDS 40.0%
CACCTGCTATGGAATAAACA+TGG - Chr3:61718529-61718548 None:intergenic 40.0%
CAGGAGAGGCTAATTTATGA+AGG + Chr3:61719522-61719541 MsG0380014869.01.T01:CDS 40.0%
CATGGTTGAGGTTTGAAAGA+AGG + Chr3:61717622-61717641 MsG0380014869.01.T01:CDS 40.0%
CCATTGAATGCAATGCTTTG+TGG + Chr3:61717903-61717922 MsG0380014869.01.T01:CDS 40.0%
CTAAAGATGCTTACCTCAAG+AGG - Chr3:61719129-61719148 None:intergenic 40.0%
CTATGTGTGAGTATCATGTC+TGG + Chr3:61719317-61719336 MsG0380014869.01.T01:intron 40.0%
CTCCTCACAACAAAACCTAT+TGG - Chr3:61718075-61718094 None:intergenic 40.0%
GAAAACAACAGCGATGTTGT+TGG + Chr3:61718373-61718392 MsG0380014869.01.T01:CDS 40.0%
GAAGATGTCTTAGAAATGCG+CGG + Chr3:61717559-61717578 MsG0380014869.01.T01:CDS 40.0%
GAGGAGAAGCAAATAAAGGA+AGG + Chr3:61718758-61718777 MsG0380014869.01.T01:CDS 40.0%
GAGGATCAAAGGTGAATGTT+TGG + Chr3:61718937-61718956 MsG0380014869.01.T01:CDS 40.0%
GGACATACCCTTATAGATAC+AGG + Chr3:61720111-61720130 MsG0380014869.01.T01:CDS 40.0%
GGTATGTCCTTAAAGGATCA+AGG - Chr3:61720100-61720119 None:intergenic 40.0%
GGTTCAATAGTGTCAGTTGA+AGG - Chr3:61717384-61717403 None:intergenic 40.0%
GTGTGTTTGTTTGTCTGATG+AGG + Chr3:61717806-61717825 MsG0380014869.01.T01:CDS 40.0%
GTTCTGCTAAAGTCTCTACA+AGG - Chr3:61717437-61717456 None:intergenic 40.0%
TAAATCAAGTGTGGCTGCAT+GGG - Chr3:61720684-61720703 None:intergenic 40.0%
TATCAGTACTTGCGAGTTAC+TGG - Chr3:61721050-61721069 None:intergenic 40.0%
TATGCATTGTAGGAAACCAG+AGG - Chr3:61720996-61721015 None:intergenic 40.0%
TCTGTTAAGGTTGTGAGGTT+TGG - Chr3:61717271-61717290 None:intergenic 40.0%
TGTTTATTCCATAGCAGGTG+TGG + Chr3:61718529-61718548 MsG0380014869.01.T01:CDS 40.0%
TTGAATGCAATGCTTTGTGG+TGG + Chr3:61717906-61717925 MsG0380014869.01.T01:CDS 40.0%
! AGCTTCTGTCATTTGCCAAT+AGG + Chr3:61718057-61718076 MsG0380014869.01.T01:CDS 40.0%
! ATTGTTTAGAGTTGAGGGCT+TGG + Chr3:61718825-61718844 MsG0380014869.01.T01:CDS 40.0%
! CACCTGATTGTTTAGAGTTG+AGG + Chr3:61718819-61718838 MsG0380014869.01.T01:CDS 40.0%
! GACAATGCTGATTGAGAAAG+CGG + Chr3:61719992-61720011 MsG0380014869.01.T01:CDS 40.0%
! GCATATATGACTAGTGCTGA+TGG + Chr3:61720499-61720518 MsG0380014869.01.T01:intron 40.0%
! GGATGGATTCTATACGATAC+TGG + Chr3:61719543-61719562 MsG0380014869.01.T01:CDS 40.0%
! GGTTCAACTGTTTTCGTGTA+AGG + Chr3:61720244-61720263 MsG0380014869.01.T01:intron 40.0%
! GTACTATTTTCTCAGTCAGG+TGG + Chr3:61718328-61718347 MsG0380014869.01.T01:CDS 40.0%
!! CCACAAAGCATTGCATTCAA+TGG - Chr3:61717906-61717925 None:intergenic 40.0%
!! CGTTGATGATGTTGGTTCTT+TGG + Chr3:61719036-61719055 MsG0380014869.01.T01:CDS 40.0%
!! GGGAGTATTTATGTGGATTG+TGG + Chr3:61719846-61719865 MsG0380014869.01.T01:CDS 40.0%
!! GGTGTTTGTTCAATGGATTG+TGG + Chr3:61717660-61717679 MsG0380014869.01.T01:CDS 40.0%
!! GTTTGTTCAATGGATTGTGG+TGG + Chr3:61717663-61717682 MsG0380014869.01.T01:CDS 40.0%
!! TGCAGGCATTGAATAACATG+GGG + Chr3:61719826-61719845 MsG0380014869.01.T01:intron 40.0%
!!! TGCCAATAGGTTTTGTTGTG+AGG + Chr3:61718070-61718089 MsG0380014869.01.T01:CDS 40.0%
AAACCATTCCACCTCAATGC+AGG + Chr3:61719503-61719522 MsG0380014869.01.T01:CDS 45.0%
AACCTGCTATGCTCAGAAAG+TGG - Chr3:61716748-61716767 None:intergenic 45.0%
CAAAGGTTGTGTTGTCTGCA+TGG + Chr3:61717604-61717623 MsG0380014869.01.T01:CDS 45.0%
CATCAACGGAAGACCATTGT+TGG - Chr3:61719024-61719043 None:intergenic 45.0%
CTCTCTCTCTCTCTCTCTAA+TGG + Chr3:61716711-61716730 MsG0380014869.01.T01:five_prime_UTR 45.0%
CTGCTGCCCTGTATCTATAA+GGG - Chr3:61720121-61720140 None:intergenic 45.0%
CTGTGTCTGTTAAGGTTGTG+AGG - Chr3:61717276-61717295 None:intergenic 45.0%
GAAAGCGGAAAGTAATGCCT+CGG + Chr3:61720007-61720026 MsG0380014869.01.T01:CDS 45.0%
GACATCTTCTGAGTAGCTTC+TGG - Chr3:61717548-61717567 None:intergenic 45.0%
GCACTTACATGTCCTTCAGA+CGG + Chr3:61719711-61719730 MsG0380014869.01.T01:CDS 45.0%
GCCCTCAACTCTAAACAATC+AGG - Chr3:61718824-61718843 None:intergenic 45.0%
GGCCATGTTTATTCCATAGC+AGG + Chr3:61718524-61718543 MsG0380014869.01.T01:CDS 45.0%
TCGAGTATAAACCAGTCGGT+TGG + Chr3:61718615-61718634 MsG0380014869.01.T01:CDS 45.0%
TCTTGATACATCCAACCGAC+TGG - Chr3:61718629-61718648 None:intergenic 45.0%
TGATCGTTTCTCATATGCCG+AGG - Chr3:61720027-61720046 None:intergenic 45.0%
TTGTGTTGTCTGCATGGTTG+AGG + Chr3:61717610-61717629 MsG0380014869.01.T01:CDS 45.0%
! AAGAGTGTGCTGCAGAGAAA+TGG + Chr3:61718405-61718424 MsG0380014869.01.T01:CDS 45.0%
! AATTAGCCTCTCCTGCATTG+AGG - Chr3:61719517-61719536 None:intergenic 45.0%
! GTTGTAAGACTTTCTGGGAG+AGG - Chr3:61720357-61720376 None:intergenic 45.0%
! TTTTCTCAGTCAGGTGGCAA+TGG + Chr3:61718334-61718353 MsG0380014869.01.T01:CDS 45.0%
!! TAGAGCATTGGAGAAAGTCG+AGG + Chr3:61718739-61718758 MsG0380014869.01.T01:CDS 45.0%
!! TCCCATTGACTCGTAAAACG+CGG - Chr3:61720609-61720628 None:intergenic 45.0%
!! TGGTCTTCCGTTGATGATGT+TGG + Chr3:61719028-61719047 MsG0380014869.01.T01:CDS 45.0%
AACTCTAGCAGGCTCTTTCC+AGG - Chr3:61719091-61719110 None:intergenic 50.0%
AGGCACACAAGAGCTCATCA+AGG + Chr3:61719915-61719934 MsG0380014869.01.T01:CDS 50.0%
ATCGTGACGAGGCTGTTACA+AGG + Chr3:61719568-61719587 MsG0380014869.01.T01:CDS 50.0%
ATTCCACCTCAATGCAGGAG+AGG + Chr3:61719508-61719527 MsG0380014869.01.T01:CDS 50.0%
CACAAGAGCTCATCAAGGTC+TGG + Chr3:61719920-61719939 MsG0380014869.01.T01:CDS 50.0%
CAGATGCTAGAGAATGAGCC+TGG + Chr3:61719070-61719089 MsG0380014869.01.T01:CDS 50.0%
CCTGCTGCCCTGTATCTATA+AGG - Chr3:61720122-61720141 None:intergenic 50.0%
CCTTATAGATACAGGGCAGC+AGG + Chr3:61720119-61720138 MsG0380014869.01.T01:CDS 50.0%
CGACACGATTCTGACACATG+TGG + Chr3:61719253-61719272 MsG0380014869.01.T01:intron 50.0%
CGCGGAAGATGTGATGTCAA+AGG + Chr3:61717587-61717606 MsG0380014869.01.T01:CDS 50.0%
GAGACAGACGAAACTCTAGC+AGG - Chr3:61719102-61719121 None:intergenic 50.0%
GGTGGCAATGGAAGAAAGCA+TGG + Chr3:61718346-61718365 MsG0380014869.01.T01:CDS 50.0%
GTCTGTCTCTACTCCTCTTG+AGG + Chr3:61719113-61719132 MsG0380014869.01.T01:CDS 50.0%
TCGTGACGAGGCTGTTACAA+GGG + Chr3:61719569-61719588 MsG0380014869.01.T01:CDS 50.0%
TCTCCTGCATTGAGGTGGAA+TGG - Chr3:61719509-61719528 None:intergenic 50.0%
TGTTCTAGCCACACCTGCTA+TGG - Chr3:61718540-61718559 None:intergenic 50.0%
! AGCCGCGTTTTACGAGTCAA+TGG + Chr3:61720604-61720623 MsG0380014869.01.T01:CDS 50.0%
! GCCGCGTTTTACGAGTCAAT+GGG + Chr3:61720605-61720624 MsG0380014869.01.T01:CDS 50.0%
!! TGCCACTTTCTGAGCATAGC+AGG + Chr3:61716743-61716762 MsG0380014869.01.T01:five_prime_UTR 50.0%
AGGCTGCAATGCGCAGTTTG+CGG + Chr3:61719472-61719491 MsG0380014869.01.T01:CDS 55.0%
CCTTTGCGAAGTCCGTCTGA+AGG - Chr3:61719726-61719745 None:intergenic 55.0%
CTGTGATCGTGAGATGGCGA+AGG + Chr3:61720052-61720071 MsG0380014869.01.T01:CDS 55.0%
TAGAAATGCGCGGCAGAACG+CGG + Chr3:61717569-61717588 MsG0380014869.01.T01:CDS 55.0%
TAGCCTCTCCTGCATTGAGG+TGG - Chr3:61719514-61719533 None:intergenic 55.0%
TCAAGTGTGGCTGCATGGGT+TGG - Chr3:61720680-61720699 None:intergenic 55.0%
! CCTTCAGACGGACTTCGCAA+AGG + Chr3:61719723-61719742 MsG0380014869.01.T01:CDS 55.0%
! CGATACTGGCTATCGTGACG+AGG + Chr3:61719557-61719576 MsG0380014869.01.T01:CDS 55.0%
TGCAATGCGCAGTTTGCGGC+TGG + Chr3:61719476-61719495 MsG0380014869.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 61716673 61721090 61716673 ID=MsG0380014869.01;Name=MsG0380014869.01
Chr3 mRNA 61716673 61721090 61716673 ID=MsG0380014869.01.T01;Parent=MsG0380014869.01;Name=MsG0380014869.01.T01;_AED=0.11;_eAED=0.11;_QI=507|1|1|1|1|1|4|357|925
Chr3 exon 61716673 61719134 61716673 ID=MsG0380014869.01.T01:exon:6360;Parent=MsG0380014869.01.T01
Chr3 exon 61719458 61719749 61719458 ID=MsG0380014869.01.T01:exon:6361;Parent=MsG0380014869.01.T01
Chr3 exon 61719831 61720140 61719831 ID=MsG0380014869.01.T01:exon:6362;Parent=MsG0380014869.01.T01
Chr3 exon 61720513 61721090 61720513 ID=MsG0380014869.01.T01:exon:6363;Parent=MsG0380014869.01.T01
Chr3 five_prime_UTR 61716673 61717179 61716673 ID=MsG0380014869.01.T01:five_prime_utr;Parent=MsG0380014869.01.T01
Chr3 CDS 61717180 61719134 61717180 ID=MsG0380014869.01.T01:cds;Parent=MsG0380014869.01.T01
Chr3 CDS 61719458 61719749 61719458 ID=MsG0380014869.01.T01:cds;Parent=MsG0380014869.01.T01
Chr3 CDS 61719831 61720140 61719831 ID=MsG0380014869.01.T01:cds;Parent=MsG0380014869.01.T01
Chr3 CDS 61720513 61720733 61720513 ID=MsG0380014869.01.T01:cds;Parent=MsG0380014869.01.T01
Chr3 three_prime_UTR 61720734 61721090 61720734 ID=MsG0380014869.01.T01:three_prime_utr;Parent=MsG0380014869.01.T01
Gene Sequence

>MsG0380014869.01.T01

ATGCGTAGTTTGAAGATTGTTGAACGTTTTAAGAGTATTCAAGTTCATGCTCTTAGTTCTTCATCTGAAACTAATGGTGATAGCAAAACCAAACCTCACAACCTTAACAGACACAGAACAATATTGTCTTGGTCAAAATCAAAATTCAACAACAGTAACACAAAAACCTCAGAATTTGCAAATCTTGTTTCTCTTCAGTTACCTTCAACTGACACTATTGAACCATCTATAGAACCTTACCTTAAACCAATCAACCTTGTAGAGACTTTAGCAGAACTCTATCAACGGATTGAGTTTTGCTCTTCACAGTCTGAGAAAGTGACACTTTTTGTTGAACTTTTCTCTGTTTTGTATGGTCTTGGAGACCAGAAGCTACTCAGAAGATGTCTTAGAAATGCGCGGCAGAACGCGGAAGATGTGATGTCAAAGGTTGTGTTGTCTGCATGGTTGAGGTTTGAAAGAAGGGATGATGAACTTGTTGGTGTTTGTTCAATGGATTGTGGTGGTTATAATGTTCTTGAATGTCCAAAGATGAATTTGGAAAATGGGTTTAGTCCTTTTTCAATTAATGATCACTGCAAGTGTACTCAAGAAGAGAAAAAGCATGAAAATTTTGATAATGATGAGTGTGTTTGTTTGTCTGATGAGGAAAGTGATGTTTTGTTTTGTGTTGGGAATGAAGAAATCAAGTGTGTTAGAAGGAGAATTGCTTCACTTTCAGAACCATTGAATGCAATGCTTTGTGGTGGATTTCTAGAATCCAAAATGTGGAAAATTGATTTTTCAGGTAATGGATTATGTTCAGAAGGAATGAAAGCAGTTGAAGTTTACAGCAGAACAAAAAGATTGGATCTTTTTTGTCCCAATACTGTTTTAGAGCTTCTGTCATTTGCCAATAGGTTTTGTTGTGAGGAGATGAAATCTTCTTGTGATTCTCATTTGGCTTCAATTGTTGGAAATGTTGAAGATGCATTGATACTTATTGAGTATGGATTGGAAGAAAGTGCAAAACTTCTTGTAGTTTCTTGCTTGCAAATTTTTCTCAGGGAGCTTCCGAATTCGCTTCATAATTCAAAGGTGATAAATTTCTTATGTAGTTTTGAGTCAAAGGAAAAGTTGGAAAATTTAGGGTGTGCTACTTTCTTGTTGTACTATTTTCTCAGTCAGGTGGCAATGGAAGAAAGCATGGTATCGAAAACAACAGCGATGTTGTTGGAGAGAATGAAAGAGTGTGCTGCAGAGAAATGGCAGAAGAGTCTTGCATTGCATCAATTAGGGTGTGTGTTTCTTGAAAGAAGAGAGTATAAAGAAGCTCAACATTGCTTCGATGAAGCAGTTGAATTAGGCCATGTTTATTCCATAGCAGGTGTGGCTAGAACAAAGCATAAACAAGGTCAACCATATTCGGCTTATAAGTTAATTAGTTCACTCATATTCGAGTATAAACCAGTCGGTTGGATGTATCAAGAGAGAGCATTGTACAATATGGGAAGAGAAAAAGGTTTTGATTTGGATTTTGCAACTCAACTCGATCCTTCACTTTCATTTCCGTATAAATATAGAGCATTGGAGAAAGTCGAGGAGAAGCAAATAAAGGAAGGGATTATGGAGTTAGATAAGTTTCTAGGATTTAAGCTTTCACCTGATTGTTTAGAGTTGAGGGCTTGGTTGTATATTGCATTAGATGATTATGATAGTGCTATAAGAGATATTAGAGCTTTGTTAACCATAGAGGCTAATTACATAACTTTACATGGGAGGATCAAAGGTGAATGTTTGGTTCAAATTCTTCAAAGTAGAATTCAGAAGAAGAATCAGGCTGATTGTTGGATGCAATTATACCAACAATGGTCTTCCGTTGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTAGAGAATGAGCCTGGAAAGAGCCTGCTAGAGTTTCGTCTGTCTCTACTCCTCTTGAGATTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGCGGCTGGCAAGAAACCATTCCACCTCAATGCAGGAGAGGCTAATTTATGAAGGATGGATTCTATACGATACTGGCTATCGTGACGAGGCTGTTACAAGGGCTGACAAATCCATTGAAATTCAGAAATCATTTGAAGCCTTTTTCCTAAAAGCATATGTGTTAGCAGATACAAATCTTGATCCTGAATCTTCTTCTTATGTTATTCAGCTTTTGAAAGAAGCACTTACATGTCCTTCAGACGGACTTCGCAAAGGACAAGCATTGAATAACATGGGGAGTATTTATGTGGATTGTGGTAAAATAGAACTTGCAAAGGAATGCTACAACAATGCACTTGCAATTAGGCACACAAGAGCTCATCAAGGTCTGGCGCGTGTTTATCATCAGAAAAATCAACGAAAGGCTGCATACGATGAGATGACAATGCTGATTGAGAAAGCGGAAAGTAATGCCTCGGCATATGAGAAACGATCAGAATACTGTGATCGTGAGATGGCGAAGGCTGATCTTGATGTTGCAACACACCTTGATCCTTTAAGGACATACCCTTATAGATACAGGGCAGCAGTGCTGATGGATGAACAAAAAGAAACAGAAGCAGTAGAAGAACTCACTAAGGCTATAAAATTCAAGCCTGATCTTCAAATGCTTCATCTGCGAGCCGCGTTTTACGAGTCAATGGGAGATCTATCTTCCGCTCTTAAAGATTGTCAAGCTGCTCTTTGTTTAGATCCAACCCATGCAGCCACACTTGATTTATGTCAAAGGATACAAAAGCTGAACTTTTGA
Protein sequence

>MsG0380014869.01.T01

MRSLKIVERFKSIQVHALSSSSETNGDSKTKPHNLNRHRTILSWSKSKFNNSNTKTSEFANLVSLQLPSTDTIEPSIEPYLKPINLVETLAELYQRIEFCSSQSEKVTLFVELFSVLYGLGDQKLLRRCLRNARQNAEDVMSKVVLSAWLRFERRDDELVGVCSMDCGGYNVLECPKMNLENGFSPFSINDHCKCTQEEKKHENFDNDECVCLSDEESDVLFCVGNEEIKCVRRRIASLSEPLNAMLCGGFLESKMWKIDFSGNGLCSEGMKAVEVYSRTKRLDLFCPNTVLELLSFANRFCCEEMKSSCDSHLASIVGNVEDALILIEYGLEESAKLLVVSCLQIFLRELPNSLHNSKVINFLCSFESKEKLENLGCATFLLYYFLSQVAMEESMVSKTTAMLLERMKECAAEKWQKSLALHQLGCVFLERREYKEAQHCFDEAVELGHVYSIAGVARTKHKQGQPYSAYKLISSLIFEYKPVGWMYQERALYNMGREKGFDLDFATQLDPSLSFPYKYRALEKVEEKQIKEGIMELDKFLGFKLSPDCLELRAWLYIALDDYDSAIRDIRALLTIEANYITLHGRIKGECLVQILQSRIQKKNQADCWMQLYQQWSSVDDVGSLAIIHQMLENEPGKSLLEFRLSLLLLRLNCQKAAMRSLRLARNHSTSMQERLIYEGWILYDTGYRDEAVTRADKSIEIQKSFEAFFLKAYVLADTNLDPESSSYVIQLLKEALTCPSDGLRKGQALNNMGSIYVDCGKIELAKECYNNALAIRHTRAHQGLARVYHQKNQRKAAYDEMTMLIEKAESNASAYEKRSEYCDREMAKADLDVATHLDPLRTYPYRYRAAVLMDEQKETEAVEELTKAIKFKPDLQMLHLRAAFYESMGDLSSALKDCQAALCLDPTHAATLDLCQRIQKLNF*