AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011399.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011399.01.T01 MTR_2g103730 98.888 809 9 0 1 809 1 809 0.0 1666
MsG0280011399.01.T01 MTR_4g010650 86.279 809 110 1 1 809 1 808 0.0 1485
MsG0280011399.01.T01 MTR_3g107320 64.234 836 255 11 5 809 4 826 0.0 1079
MsG0280011399.01.T01 MTR_3g107360 63.164 828 273 11 5 809 4 822 0.0 1063
MsG0280011399.01.T01 MTR_7g075910 46.368 826 392 16 4 797 297 1103 0.0 734
MsG0280011399.01.T01 MTR_5g011050 45.738 833 388 17 4 797 36 843 0.0 731
MsG0280011399.01.T01 MTR_8g033080 45.933 836 392 17 1 797 224 1038 0.0 731
MsG0280011399.01.T01 MTR_5g011060 45.134 822 403 17 4 797 36 837 0.0 714
MsG0280011399.01.T01 MTR_5g023050 46.278 806 368 14 50 809 86 872 0.0 712
MsG0280011399.01.T01 MTR_8g088690 45.476 851 398 20 4 809 13 842 0.0 703
MsG0280011399.01.T01 MTR_3g114840 44.406 858 412 18 2 809 9 851 0.0 699
MsG0280011399.01.T01 MTR_2g100250 44.760 811 384 19 5 809 4 756 0.0 651
MsG0280011399.01.T01 MTR_3g114840 42.911 797 382 18 2 739 9 791 0.0 608
MsG0280011399.01.T01 MTR_8g016160 41.892 814 389 23 5 809 7 745 0.0 586
MsG0280011399.01.T01 MTR_8g033080 44.984 618 297 12 1 590 224 826 4.53e-174 523
MsG0280011399.01.T01 MTR_1g083620 33.054 239 123 9 498 726 477 688 3.78e-23 105
MsG0280011399.01.T01 MTR_1g083620 28.696 230 119 9 211 427 127 324 6.66e-15 79.3
MsG0280011399.01.T01 MTR_1g083620 33.054 239 123 9 498 726 737 948 4.49e-23 106
MsG0280011399.01.T01 MTR_1g083620 28.696 230 119 9 211 427 387 584 4.59e-15 80.1
MsG0280011399.01.T01 MTR_2g435560 30.242 248 135 8 457 693 600 820 2.41e-18 90.9
MsG0280011399.01.T01 MTR_2g435560 26.641 259 135 11 211 449 253 476 2.29e-14 77.8
MsG0280011399.01.T01 MTR_2g435560 30.924 249 132 10 457 693 735 955 2.54e-18 90.9
MsG0280011399.01.T01 MTR_2g435560 26.641 259 135 11 211 449 388 611 2.05e-14 78.2
MsG0280011399.01.T01 MTR_5g023040 51.389 72 31 1 324 395 806 873 3.73e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011399.01.T01 AT3G15730 80.812 813 149 2 1 809 1 810 0.0 1400
MsG0280011399.01.T01 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MsG0280011399.01.T01 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MsG0280011399.01.T01 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MsG0280011399.01.T01 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MsG0280011399.01.T01 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MsG0280011399.01.T01 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MsG0280011399.01.T01 AT5G25370 65.323 744 249 6 72 809 5 745 0.0 1006
MsG0280011399.01.T01 AT2G42010 45.742 822 400 16 4 797 269 1072 0.0 738
MsG0280011399.01.T01 AT2G42010 44.668 844 402 16 4 797 269 1097 0.0 730
MsG0280011399.01.T01 AT4G00240 45.910 819 403 16 4 797 113 916 0.0 726
MsG0280011399.01.T01 AT4G00240 47.416 774 373 14 44 797 122 881 0.0 723
MsG0280011399.01.T01 AT4G00240 47.416 774 373 14 44 797 5 764 0.0 723
MsG0280011399.01.T01 AT4G11830 45.048 828 405 18 5 797 33 845 0.0 713
MsG0280011399.01.T01 AT4G11830 46.410 780 377 17 44 797 49 813 0.0 707
MsG0280011399.01.T01 AT4G11840 44.565 828 409 17 5 797 43 855 0.0 706
MsG0280011399.01.T01 AT4G11850 44.782 824 409 16 5 797 39 847 0.0 704
MsG0280011399.01.T01 AT4G11840 44.256 827 383 17 5 797 43 825 0.0 691
MsG0280011399.01.T01 AT4G35790 45.330 803 379 18 46 809 76 857 0.0 672
MsG0280011399.01.T01 AT4G35790 44.963 814 377 19 46 809 76 868 0.0 667
MsG0280011399.01.T01 AT1G55180 40.465 818 408 19 6 809 10 762 0.0 587
MsG0280011399.01.T01 AT1G55180 41.505 771 391 17 50 809 19 740 0.0 586
MsG0280011399.01.T01 AT4G35790 45.219 617 290 13 46 627 76 679 8.01e-173 515
MsG0280011399.01.T01 AT4G11830 44.007 609 304 12 5 590 33 627 2.34e-168 501
MsG0280011399.01.T01 AT4G11830 43.740 599 300 12 5 580 33 617 3.20e-164 491
MsG0280011399.01.T01 AT3G05630 27.036 614 289 27 208 725 372 922 8.27e-31 130
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 9.52e-19 92.0
MsG0280011399.01.T01 AT3G16785 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 9.52e-19 92.0
MsG0280011399.01.T01 AT3G16785 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
MsG0280011399.01.T01 AT3G16785 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
MsG0280011399.01.T01 AT3G16785 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 9.93e-19 92.0
MsG0280011399.01.T01 AT3G16785 28.514 249 123 9 221 449 390 603 5.60e-15 80.1
MsG0280011399.01.T01 AT3G16785 34.483 203 99 8 497 693 756 930 1.03e-18 92.0
MsG0280011399.01.T01 AT3G16785 28.514 249 123 9 221 449 390 603 5.32e-15 80.1

Find 258 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2:-83471840 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2:-83470906 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2:+83469469 MsG0280011399.01.T01:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2:-83471083 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2:+83470158 MsG0280011399.01.T01:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2:-83470813 None:intergenic
TTGACGGTGGAGCAGCTTTC+GGG 0.225952 2:+83470580 MsG0280011399.01.T01:CDS
AACACCACAAATACTATATT+TGG 0.233491 2:-83472095 None:intergenic
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2:+83470345 MsG0280011399.01.T01:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2:+83472011 MsG0280011399.01.T01:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2:-83469758 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2:+83471937 MsG0280011399.01.T01:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2:-83469661 None:intergenic
ATGAAACTAAGTAGTAAGTA+TGG 0.272402 2:-83472057 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2:-83469574 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2:+83471871 MsG0280011399.01.T01:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2:+83469968 MsG0280011399.01.T01:CDS
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2:+83469537 MsG0280011399.01.T01:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2:+83469620 MsG0280011399.01.T01:CDS
ATTGACGGTGGAGCAGCTTT+CGG 0.298826 2:+83470579 MsG0280011399.01.T01:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2:-83471680 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2:-83470131 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2:-83471759 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2:-83471839 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2:+83469454 MsG0280011399.01.T01:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2:-83469314 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2:-83469757 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2:-83469469 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2:+83470327 MsG0280011399.01.T01:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2:-83470615 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2:-83470198 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2:+83469754 MsG0280011399.01.T01:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2:+83471733 MsG0280011399.01.T01:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2:-83470525 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2:-83471872 None:intergenic
TAATAAGCTTGAGATGATTA+AGG 0.351704 2:+83472182 MsG0280011399.01.T01:three_prime_UTR
TGAAAGATGATAATCCTATT+GGG 0.352247 2:+83469455 MsG0280011399.01.T01:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2:-83471736 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2:-83470508 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2:+83469411 MsG0280011399.01.T01:CDS
TTCACCAAATATAGTATTTG+TGG 0.363035 2:+83472091 MsG0280011399.01.T01:three_prime_UTR
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2:+83469501 MsG0280011399.01.T01:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2:+83471936 MsG0280011399.01.T01:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2:+83471759 MsG0280011399.01.T01:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2:+83469838 MsG0280011399.01.T01:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2:+83470126 MsG0280011399.01.T01:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2:-83469482 None:intergenic
TAAACTTTGTAGGTAATTGA+TGG 0.377297 2:+83467424 MsG0280011399.01.T01:intron
CCTGAACTGATGCACTTTCT+GGG 0.377490 2:-83470905 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2:+83469502 MsG0280011399.01.T01:CDS
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2:+83469969 MsG0280011399.01.T01:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2:-83471964 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2:+83470905 MsG0280011399.01.T01:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2:+83469693 MsG0280011399.01.T01:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2:+83470627 MsG0280011399.01.T01:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2:+83469652 MsG0280011399.01.T01:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2:-83469907 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2:-83472008 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2:+83470403 MsG0280011399.01.T01:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2:+83471841 MsG0280011399.01.T01:CDS
TTCCACGTCTCTTGATCATC+AGG 0.411607 2:-83470537 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 2:-83470783 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2:+83469562 MsG0280011399.01.T01:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2:+83471872 MsG0280011399.01.T01:CDS
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2:+83470615 MsG0280011399.01.T01:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2:+83467469 MsG0280011399.01.T01:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2:+83470089 MsG0280011399.01.T01:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2:-83471156 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2:-83470278 None:intergenic
GAGATGAAAATGAGAGTAGT+TGG 0.439267 2:-83467287 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2:+83469280 MsG0280011399.01.T01:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2:-83469679 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2:+83469872 MsG0280011399.01.T01:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2:-83470336 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2:-83471092 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.446591 2:-83469329 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2:+83470726 MsG0280011399.01.T01:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2:+83469881 MsG0280011399.01.T01:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2:+83470649 MsG0280011399.01.T01:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2:+83471149 MsG0280011399.01.T01:CDS
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2:+83470834 MsG0280011399.01.T01:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2:+83469274 MsG0280011399.01.T01:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2:+83469264 MsG0280011399.01.T01:intron
GATATCCACTCAAGGCTTGA+AGG 0.460473 2:+83470390 MsG0280011399.01.T01:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2:-83470607 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2:-83469505 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2:-83470606 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2:+83470404 MsG0280011399.01.T01:CDS
TGTTTATACTGAGATTTCCT+TGG 0.470042 2:+83469867 MsG0280011399.01.T01:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2:-83471670 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2:-83472015 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2:-83471098 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2:-83471930 None:intergenic
TATTTGACGTTCTTCTGCCT+TGG 0.479379 2:+83471023 MsG0280011399.01.T01:CDS
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2:+83471951 MsG0280011399.01.T01:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2:-83469742 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2:-83470518 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2:+83469873 MsG0280011399.01.T01:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2:-83470894 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2:-83469426 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2:+83471746 MsG0280011399.01.T01:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2:-83469425 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2:+83469377 MsG0280011399.01.T01:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2:+83471106 MsG0280011399.01.T01:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2:-83470994 None:intergenic
AGTAGTTGGTGAATGATGAA+TGG 0.496273 2:-83467273 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2:-83470414 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2:+83469628 MsG0280011399.01.T01:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2:-83471938 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2:+83469286 MsG0280011399.01.T01:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2:+83470433 MsG0280011399.01.T01:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2:-83470524 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2:-83470519 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2:+83469785 MsG0280011399.01.T01:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2:-83469913 None:intergenic
CAGCTATTTAGATCTATTGA+CGG 0.506424 2:+83470564 MsG0280011399.01.T01:CDS
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2:-83471952 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2:+83471745 MsG0280011399.01.T01:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2:-83471829 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2:+83471702 MsG0280011399.01.T01:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2:-83470517 None:intergenic
GATAAACTCAAGAATATTAG+TGG 0.518555 2:+83467494 MsG0280011399.01.T01:CDS
TTACCAGCCTCATAGATGTT+GGG 0.519232 2:+83469786 MsG0280011399.01.T01:CDS
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2:+83469895 MsG0280011399.01.T01:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2:-83471990 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2:-83469670 None:intergenic
ACAATGCTTCCACCATCATC+CGG 0.527676 2:-83470108 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2:+83470452 MsG0280011399.01.T01:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2:+83470986 MsG0280011399.01.T01:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2:+83467514 MsG0280011399.01.T01:CDS
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2:+83470096 MsG0280011399.01.T01:CDS
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2:-83471833 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.535661 2:+83469357 MsG0280011399.01.T01:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2:+83469473 MsG0280011399.01.T01:CDS
AACATAAATCATGAAACGCC+TGG 0.540335 2:-83471129 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2:-83469789 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2:+83472014 MsG0280011399.01.T01:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2:-83469793 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2:+83471671 MsG0280011399.01.T01:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2:+83471912 MsG0280011399.01.T01:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.545943 2:-83472053 None:intergenic
CCACCATCATCCGGATTGCG+AGG 0.547386 2:-83470099 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2:+83470628 MsG0280011399.01.T01:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2:+83471111 MsG0280011399.01.T01:CDS
GTAGTTGGTGAATGATGAAT+GGG 0.548930 2:-83467272 None:intergenic
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2:-83470068 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2:-83472007 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2:+83470879 MsG0280011399.01.T01:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2:+83470616 MsG0280011399.01.T01:CDS
TGTCTGGGATATGAGAATCT+TGG 0.552039 2:-83469726 None:intergenic
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2:-83471080 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2:+83469951 MsG0280011399.01.T01:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2:+83470919 MsG0280011399.01.T01:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2:+83467443 MsG0280011399.01.T01:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2:-83471951 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2:-83469391 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2:+83469417 MsG0280011399.01.T01:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2:+83470364 MsG0280011399.01.T01:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2:-83470279 None:intergenic
TGAAACTAAGTAGTAAGTAT+GGG 0.559004 2:-83472056 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2:-83470415 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2:+83470977 MsG0280011399.01.T01:CDS
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2:+83470841 MsG0280011399.01.T01:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2:-83471735 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2:-83470372 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2:+83469525 MsG0280011399.01.T01:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2:+83470742 MsG0280011399.01.T01:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2:-83470296 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2:+83470835 MsG0280011399.01.T01:CDS
TAGAGAAAGCACGAGTTGGA+AGG 0.569104 2:+83469338 MsG0280011399.01.T01:CDS
GATTTAGAGAAAGCACGAGT+TGG 0.572450 2:+83469334 MsG0280011399.01.T01:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2:+83470632 MsG0280011399.01.T01:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2:+83471972 MsG0280011399.01.T01:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2:+83470444 MsG0280011399.01.T01:CDS
GGTGAATGATGAATGGGAAA+AGG 0.574467 2:-83467266 None:intergenic
CACCATCATCCGGATTGCGA+GGG 0.575824 2:-83470098 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2:+83471701 MsG0280011399.01.T01:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2:+83470925 MsG0280011399.01.T01:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2:+83470928 MsG0280011399.01.T01:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2:+83471938 MsG0280011399.01.T01:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2:-83470886 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2:+83469913 MsG0280011399.01.T01:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2:-83469741 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2:+83469818 MsG0280011399.01.T01:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2:+83469474 MsG0280011399.01.T01:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2:+83470753 MsG0280011399.01.T01:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2:+83469492 MsG0280011399.01.T01:CDS
AACTATGATAAATTCTAGCT+AGG 0.596031 2:+83472251 MsG0280011399.01.T01:three_prime_UTR
GATGATGAATACATAATCGT+CGG 0.596091 2:+83471642 MsG0280011399.01.T01:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.596722 2:-83472052 None:intergenic
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2:-83471929 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2:+83469521 MsG0280011399.01.T01:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2:+83470188 MsG0280011399.01.T01:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2:-83470395 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2:+83471037 MsG0280011399.01.T01:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2:-83471935 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2:+83471845 MsG0280011399.01.T01:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2:+83470836 MsG0280011399.01.T01:CDS
ATATAGTAGAATACATGTCA+AGG 0.610154 2:-83472277 None:intergenic
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2:+83470878 MsG0280011399.01.T01:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2:+83471047 MsG0280011399.01.T01:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2:-83472049 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2:-83469756 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2:-83471809 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2:+83469456 MsG0280011399.01.T01:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2:+83469510 MsG0280011399.01.T01:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2:+83470447 MsG0280011399.01.T01:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2:+83469495 MsG0280011399.01.T01:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2:-83470743 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2:+83470243 MsG0280011399.01.T01:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2:+83471034 MsG0280011399.01.T01:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2:-83470885 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2:+83469685 MsG0280011399.01.T01:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2:+83469839 MsG0280011399.01.T01:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2:+83470038 MsG0280011399.01.T01:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2:+83471998 MsG0280011399.01.T01:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2:+83470997 MsG0280011399.01.T01:CDS
TGGAAACCCCAATGGGATAG+CGG 0.631998 2:-83471944 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2:+83470382 MsG0280011399.01.T01:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2:+83471778 MsG0280011399.01.T01:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2:+83471747 MsG0280011399.01.T01:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2:+83470189 MsG0280011399.01.T01:CDS
GGTATTAAGCCTGAAGACAT+TGG 0.635944 2:+83470774 MsG0280011399.01.T01:CDS
AAACTCAAGAATATTAGTGG+TGG 0.636100 2:+83467497 MsG0280011399.01.T01:CDS
CTATTTAGATCTATTGACGG+TGG 0.636765 2:+83470567 MsG0280011399.01.T01:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2:-83471040 None:intergenic
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2:+83470978 MsG0280011399.01.T01:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2:+83471675 MsG0280011399.01.T01:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2:+83470860 MsG0280011399.01.T01:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2:-83469633 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2:+83470099 MsG0280011399.01.T01:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2:+83469984 MsG0280011399.01.T01:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2:-83469884 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2:+83469524 MsG0280011399.01.T01:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2:-83471785 None:intergenic
TCCACGTCTCTTGATCATCA+GGG 0.654558 2:-83470536 None:intergenic
TCCCTGATGATCAAGAGACG+TGG 0.655773 2:+83470535 MsG0280011399.01.T01:CDS
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2:-83470605 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2:+83469621 MsG0280011399.01.T01:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2:+83469789 MsG0280011399.01.T01:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2:+83469884 MsG0280011399.01.T01:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2:+83470051 MsG0280011399.01.T01:CDS
CTTGAGTGGATATCATGCCA+AGG 0.664717 2:-83470381 None:intergenic
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2:+83469505 MsG0280011399.01.T01:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2:+83470436 MsG0280011399.01.T01:CDS
CAATGACTGTAATGGTACAA+TGG 0.673114 2:+83472126 MsG0280011399.01.T01:three_prime_UTR
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2:-83470523 None:intergenic
AGTGTGAGCAATGACTGTAA+TGG 0.685043 2:+83472118 MsG0280011399.01.T01:three_prime_UTR
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2:-83470486 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2:+83470935 MsG0280011399.01.T01:CDS
AAGAACGTCAAATAGTTCCG+AGG 0.694365 2:-83471014 None:intergenic
CCCAATATACAACTTGCAGG+AGG 0.700952 2:+83469757 MsG0280011399.01.T01:CDS
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2:+83469898 MsG0280011399.01.T01:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2:-83470151 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2:+83470871 MsG0280011399.01.T01:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2:+83471792 MsG0280011399.01.T01:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2:+83469842 MsG0280011399.01.T01:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2:-83470277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG - Chr2:83468147-83468166 None:intergenic 10.0%
!! ATATATTCATTTAGATTATT+AGG + Chr2:83468575-83468594 MsG0280011399.01.T01:intron 10.0%
!! TATATTCATTTAGATTATTA+GGG + Chr2:83468576-83468595 MsG0280011399.01.T01:intron 10.0%
!! AATTATTCATTTAGATAAGT+TGG + Chr2:83471448-83471467 MsG0280011399.01.T01:intron 15.0%
!! ATAAAAGCCAAAAAAAAAAA+AGG - Chr2:83467553-83467572 None:intergenic 15.0%
!! CAAATGATTAGAATTTAAAA+TGG - Chr2:83467387-83467406 None:intergenic 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG + Chr2:83468391-83468410 MsG0280011399.01.T01:intron 15.0%
!!! AAACAAAAATATTTTCATCA+GGG - Chr2:83469122-83469141 None:intergenic 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG + Chr2:83468169-83468188 MsG0280011399.01.T01:intron 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG + Chr2:83471398-83471417 MsG0280011399.01.T01:intron 15.0%
!!! TTTTCTTCCTTTTTTTTTTT+TGG + Chr2:83467543-83467562 MsG0280011399.01.T01:intron 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG + Chr2:83468170-83468189 MsG0280011399.01.T01:intron 15.0%
!! AAAAGAACATTAAATGTGAT+TGG - Chr2:83468303-83468322 None:intergenic 20.0%
!! AAAGTTATTTGTAGGATAAA+AGG + Chr2:83471406-83471425 MsG0280011399.01.T01:intron 20.0%
!! AAGGAATGTTATACAAAATA+TGG - Chr2:83471195-83471214 None:intergenic 20.0%
!! AGATTCAAATGAACAAATTA+AGG - Chr2:83468713-83468732 None:intergenic 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG + Chr2:83468201-83468220 MsG0280011399.01.T01:intron 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG - Chr2:83468987-83469006 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG + Chr2:83470726-83470745 MsG0280011399.01.T01:CDS 20.0%
!! CTTCAAAAAAAAATTGTGAA+GGG + Chr2:83468664-83468683 MsG0280011399.01.T01:intron 20.0%
!! TAAACTCATAAATGTTTGAA+TGG + Chr2:83468064-83468083 MsG0280011399.01.T01:intron 20.0%
!! TAACTATAGTTAAACTTTGT+AGG + Chr2:83467414-83467433 MsG0280011399.01.T01:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG + Chr2:83468200-83468219 MsG0280011399.01.T01:intron 20.0%
!! TCTTCAAAAAAAAATTGTGA+AGG + Chr2:83468663-83468682 MsG0280011399.01.T01:intron 20.0%
!!! ATGTTTGATTTTAATTGTGA+AGG + Chr2:83468631-83468650 MsG0280011399.01.T01:intron 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG + Chr2:83467869-83467888 MsG0280011399.01.T01:intron 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG - Chr2:83471232-83471251 None:intergenic 20.0%
!!! GAAACAAAAATATTTTCATC+AGG - Chr2:83469123-83469142 None:intergenic 20.0%
!!! GTTAGGTTAATTGTAATTTT+TGG + Chr2:83467886-83467905 MsG0280011399.01.T01:intron 20.0%
!!! TGTTTGATTTTAATTGTGAA+GGG + Chr2:83468632-83468651 MsG0280011399.01.T01:intron 20.0%
!!! TTGTAGTATTTTTTTTTCTC+TGG + Chr2:83472322-83472341 MsG0280011399.01.T01:three_prime_UTR 20.0%
! AACACCACAAATACTATATT+TGG - Chr2:83472098-83472117 None:intergenic 25.0%
! ATATAGTAGAATACATGTCA+AGG - Chr2:83472280-83472299 None:intergenic 25.0%
! ATCTTTGAATTTCCATGAAT+TGG - Chr2:83469577-83469596 None:intergenic 25.0%
! ATGAAACTAAGTAGTAAGTA+TGG - Chr2:83472060-83472079 None:intergenic 25.0%
! ATTGTCCAGAATATAGAAAT+TGG + Chr2:83470126-83470145 MsG0280011399.01.T01:CDS 25.0%
! GATAAACTCAAGAATATTAG+TGG + Chr2:83467494-83467513 MsG0280011399.01.T01:CDS 25.0%
! TAAACTTTGTAGGTAATTGA+TGG + Chr2:83467424-83467443 MsG0280011399.01.T01:intron 25.0%
! TAATAAGCTTGAGATGATTA+AGG + Chr2:83472182-83472201 MsG0280011399.01.T01:three_prime_UTR 25.0%
! TACTGTTGTAAATTTCTAAC+TGG + Chr2:83468514-83468533 MsG0280011399.01.T01:intron 25.0%
! TGAAACTAAGTAGTAAGTAT+GGG - Chr2:83472059-83472078 None:intergenic 25.0%
! TGAAAGATGATAATCCTATT+GGG + Chr2:83469455-83469474 MsG0280011399.01.T01:CDS 25.0%
! TGAGATTAATAAAAGAAAGC+TGG + Chr2:83471525-83471544 MsG0280011399.01.T01:intron 25.0%
! TTAGATAAGACAAAACTTTG+AGG + Chr2:83469264-83469283 MsG0280011399.01.T01:intron 25.0%
! TTATAATATCGCCAATTGTA+TGG + Chr2:83468456-83468475 MsG0280011399.01.T01:intron 25.0%
! TTATTTAATCCCACTTCATT+TGG - Chr2:83470201-83470220 None:intergenic 25.0%
! TTCACCAAATATAGTATTTG+TGG + Chr2:83472091-83472110 MsG0280011399.01.T01:three_prime_UTR 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG + Chr2:83470007-83470026 MsG0280011399.01.T01:CDS 25.0%
! TTTGTACCTTTATTACATGA+TGG + Chr2:83469146-83469165 MsG0280011399.01.T01:intron 25.0%
!! AACTATGATAAATTCTAGCT+AGG + Chr2:83472251-83472270 MsG0280011399.01.T01:three_prime_UTR 25.0%
!! GAAGGATAATTTTTCACTTT+TGG + Chr2:83469168-83469187 MsG0280011399.01.T01:intron 25.0%
!! TACTCATCATCAGAAAATTT+TGG + Chr2:83470158-83470177 MsG0280011399.01.T01:CDS 25.0%
!!! AGAATTTTTTTGTCCAAATG+TGG - Chr2:83471475-83471494 None:intergenic 25.0%
!!! CATATGTGTTCATGTTTTTT+GGG - Chr2:83468854-83468873 None:intergenic 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG + Chr2:83468948-83468967 MsG0280011399.01.T01:intron 25.0%
!!! TCATATGTGTTCATGTTTTT+TGG - Chr2:83468855-83468874 None:intergenic 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG + Chr2:83467629-83467648 MsG0280011399.01.T01:intron 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG + Chr2:83468947-83468966 MsG0280011399.01.T01:intron 25.0%
AAAAGAAAAAACAGTTTCGC+AGG - Chr2:83472153-83472172 None:intergenic 30.0%
AAACTCAAGAATATTAGTGG+TGG + Chr2:83467497-83467516 MsG0280011399.01.T01:CDS 30.0%
AACCCTATCATTTAGCTAAT+AGG + Chr2:83471733-83471752 MsG0280011399.01.T01:CDS 30.0%
ACCAAGAAAATATCCTTTGA+TGG + Chr2:83471575-83471594 MsG0280011399.01.T01:intron 30.0%
ACTTAATATACATTACAGGG+TGG + Chr2:83469842-83469861 MsG0280011399.01.T01:CDS 30.0%
AGGCACTTAATATACATTAC+AGG + Chr2:83469838-83469857 MsG0280011399.01.T01:CDS 30.0%
AGGTTTGAGTAAAATTCATG+TGG - Chr2:83471315-83471334 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG - Chr2:83471095-83471114 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG - Chr2:83469317-83469336 None:intergenic 30.0%
ATCCTTCCATCATGTAATAA+AGG - Chr2:83469155-83469174 None:intergenic 30.0%
ATGAACACATATGAACTCAA+AGG + Chr2:83468861-83468880 MsG0280011399.01.T01:intron 30.0%
ATTAGAAGTCCTAAATTTCC+TGG + Chr2:83469652-83469671 MsG0280011399.01.T01:CDS 30.0%
ATTTGCCCAAAAACTTCTAA+AGG - Chr2:83468417-83468436 None:intergenic 30.0%
CAGCTATTTAGATCTATTGA+CGG + Chr2:83470564-83470583 MsG0280011399.01.T01:CDS 30.0%
GAAAGATGATAATCCTATTG+GGG + Chr2:83469456-83469475 MsG0280011399.01.T01:CDS 30.0%
GATGATGAATACATAATCGT+CGG + Chr2:83471642-83471661 MsG0280011399.01.T01:CDS 30.0%
GGAAGGATAACATAATAGAT+AGG + Chr2:83470649-83470668 MsG0280011399.01.T01:CDS 30.0%
GGCACTTAATATACATTACA+GGG + Chr2:83469839-83469858 MsG0280011399.01.T01:CDS 30.0%
GGCGATATTATAAAAATCCA+AGG - Chr2:83468449-83468468 None:intergenic 30.0%
GGTTTGAGTAAAATTCATGT+GGG - Chr2:83471314-83471333 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG + Chr2:83469454-83469473 MsG0280011399.01.T01:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG + Chr2:83469562-83469581 MsG0280011399.01.T01:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG + Chr2:83470006-83470025 MsG0280011399.01.T01:CDS 30.0%
TAATGCATTCTTCACTTTCT+GGG - Chr2:83471842-83471861 None:intergenic 30.0%
TCTTAAAAATATCCCATCAG+AGG - Chr2:83468946-83468965 None:intergenic 30.0%
TGCCTATTAGCTAAATGATA+GGG - Chr2:83471738-83471757 None:intergenic 30.0%
TGTTTATACTGAGATTTCCT+TGG + Chr2:83469867-83469886 MsG0280011399.01.T01:CDS 30.0%
TTACTTACCTATCATCATCT+TGG - Chr2:83471159-83471178 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG - Chr2:83471573-83471592 None:intergenic 30.0%
! AAATGTTTGAATGGTAGTGA+AGG + Chr2:83468073-83468092 MsG0280011399.01.T01:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG - Chr2:83471579-83471598 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG + Chr2:83471579-83471598 MsG0280011399.01.T01:intron 30.0%
! ATCTTAACCTTGTTCGTTTT+AGG + Chr2:83469005-83469024 MsG0280011399.01.T01:intron 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG - Chr2:83470816-83470835 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG - Chr2:83471566-83471585 None:intergenic 30.0%
! GAGATTTGTTCTTTCAAACA+CGG + Chr2:83467968-83467987 MsG0280011399.01.T01:intron 30.0%
! TACCTTTATTACATGATGGA+AGG + Chr2:83469150-83469169 MsG0280011399.01.T01:intron 30.0%
! TAGGGTATTAATGCTTGTTT+GGG + Chr2:83469969-83469988 MsG0280011399.01.T01:CDS 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG - Chr2:83471567-83471586 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG + Chr2:83470161-83470180 MsG0280011399.01.T01:CDS 30.0%
! TCTTAACCTTGTTCGTTTTA+GGG + Chr2:83469006-83469025 MsG0280011399.01.T01:intron 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG - Chr2:83470815-83470834 None:intergenic 30.0%
! TTAGGGTATTAATGCTTGTT+TGG + Chr2:83469968-83469987 MsG0280011399.01.T01:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG - Chr2:83470154-83470173 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG - Chr2:83471214-83471233 None:intergenic 30.0%
!! CAAAAGGTCATTTTAATGTC+AGG - Chr2:83468752-83468771 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG + Chr2:83470014-83470033 MsG0280011399.01.T01:CDS 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG + Chr2:83468409-83468428 MsG0280011399.01.T01:intron 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG + Chr2:83468408-83468427 MsG0280011399.01.T01:intron 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG - Chr2:83470012-83470031 None:intergenic 30.0%
AAACAAAACATCCCAAGCAA+TGG - Chr2:83470418-83470437 None:intergenic 35.0%
AACAAAACATCCCAAGCAAT+GGG - Chr2:83470417-83470436 None:intergenic 35.0%
AACAAACCTGGATCTTTGTT+AGG + Chr2:83468885-83468904 MsG0280011399.01.T01:intron 35.0%
AACATAAATCATGAAACGCC+TGG - Chr2:83471132-83471151 None:intergenic 35.0%
AACTAAGTAGTAAGTATGGG+TGG - Chr2:83472056-83472075 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG + Chr2:83469357-83469376 MsG0280011399.01.T01:CDS 35.0%
AAGTGAAGAATGCATTAGGA+AGG + Chr2:83471845-83471864 MsG0280011399.01.T01:CDS 35.0%
AATAGAAAAAGGTGGTCCTA+GGG + Chr2:83470356-83470375 MsG0280011399.01.T01:CDS 35.0%
ACATAGCATATGCAGGATAA+AGG - Chr2:83468826-83468845 None:intergenic 35.0%
ACCAGATTGCTGACAAATAT+TGG + Chr2:83471871-83471890 MsG0280011399.01.T01:CDS 35.0%
ACTAAGTAGTAAGTATGGGT+GGG - Chr2:83472055-83472074 None:intergenic 35.0%
AGACCAGCTTAATGAACAAA+AGG - Chr2:83468768-83468787 None:intergenic 35.0%
ATACTGAGATTTCCTTGGTA+AGG + Chr2:83469872-83469891 MsG0280011399.01.T01:CDS 35.0%
ATATGATATCCGATGCCAAA+TGG - Chr2:83469429-83469448 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG - Chr2:83469745-83469764 None:intergenic 35.0%
ATCAACCAAAGATCAATGGA+TGG + Chr2:83471675-83471694 MsG0280011399.01.T01:CDS 35.0%
ATGAACTTCTGTCTTATCCA+TGG - Chr2:83468258-83468277 None:intergenic 35.0%
ATGCACTTATGCTAAAACGA+AGG - Chr2:83469052-83469071 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG + Chr2:83470834-83470853 MsG0280011399.01.T01:CDS 35.0%
CAAAAAATTGCAGCTTCACA+TGG - Chr2:83469600-83469619 None:intergenic 35.0%
CAAAATCGAAGAAGATGAAG+AGG - Chr2:83467344-83467363 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG + Chr2:83471671-83471690 MsG0280011399.01.T01:CDS 35.0%
CAATGACTGTAATGGTACAA+TGG + Chr2:83472126-83472145 MsG0280011399.01.T01:three_prime_UTR 35.0%
CAGAAAGTGAAGAATGCATT+AGG + Chr2:83471841-83471860 MsG0280011399.01.T01:CDS 35.0%
CAGTTCAAGTCTTTCTGATA+AGG - Chr2:83468043-83468062 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG + Chr2:83471872-83471891 MsG0280011399.01.T01:CDS 35.0%
CTAACGCATGTAAACATAAG+TGG - Chr2:83469097-83469116 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG - Chr2:83471843-83471862 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG + Chr2:83468097-83468116 MsG0280011399.01.T01:intron 35.0%
CTATTTAGATCTATTGACGG+TGG + Chr2:83470567-83470586 MsG0280011399.01.T01:CDS 35.0%
CTGCCTATTAGCTAAATGAT+AGG - Chr2:83471739-83471758 None:intergenic 35.0%
GAAAAGGAGACCTACTAAAT+AGG - Chr2:83471278-83471297 None:intergenic 35.0%
GAGATGAAAATGAGAGTAGT+TGG - Chr2:83467290-83467309 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG + Chr2:83468260-83468279 MsG0280011399.01.T01:intron 35.0%
GGATAAAACATAGCATATGC+AGG - Chr2:83468833-83468852 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG - Chr2:83470282-83470301 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG - Chr2:83469664-83469683 None:intergenic 35.0%
TACTCATGATCAAGAAACTG+AGG + Chr2:83470038-83470057 MsG0280011399.01.T01:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG + Chr2:83469873-83469892 MsG0280011399.01.T01:CDS 35.0%
TATGATATCCGATGCCAAAT+GGG - Chr2:83469428-83469447 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG - Chr2:83469744-83469763 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG - Chr2:83469332-83469351 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG + Chr2:83467469-83467488 MsG0280011399.01.T01:CDS 35.0%
TGAAAAGACTCATTCCATTG+AGG - Chr2:83469394-83469413 None:intergenic 35.0%
TGAATCTATTTGTCACCTGT+CGG + Chr2:83468726-83468745 MsG0280011399.01.T01:intron 35.0%
TGCACTTATGCTAAAACGAA+GGG - Chr2:83469051-83469070 None:intergenic 35.0%
TTCGGAAAAGTGAATGAAAC+GGG - Chr2:83470281-83470300 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG + Chr2:83469818-83469837 MsG0280011399.01.T01:CDS 35.0%
TTGTTAGCAAGATTGAAGCT+GGG + Chr2:83470835-83470854 MsG0280011399.01.T01:CDS 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG + Chr2:83468218-83468237 MsG0280011399.01.T01:intron 35.0%
! ACGCATTCAATCAGAAGTAT+CGG + Chr2:83467753-83467772 MsG0280011399.01.T01:intron 35.0%
! ATGCTCCTTTTCTATGATTC+TGG - Chr2:83469365-83469384 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG - Chr2:83471673-83471692 None:intergenic 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG + Chr2:83469943-83469962 MsG0280011399.01.T01:CDS 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG - Chr2:83469682-83469701 None:intergenic 35.0%
! TGACCTTTTGTTCATTAAGC+TGG + Chr2:83468762-83468781 MsG0280011399.01.T01:intron 35.0%
! TGGTGCCAATTTCTATATTC+TGG - Chr2:83470134-83470153 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG + Chr2:83470433-83470452 MsG0280011399.01.T01:CDS 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG + Chr2:83469950-83469969 MsG0280011399.01.T01:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG + Chr2:83469951-83469970 MsG0280011399.01.T01:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG + Chr2:83470225-83470244 MsG0280011399.01.T01:CDS 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG + Chr2:83471702-83471721 MsG0280011399.01.T01:CDS 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG + Chr2:83469537-83469556 MsG0280011399.01.T01:CDS 35.0%
!! AGTAGTTGGTGAATGATGAA+TGG - Chr2:83467276-83467295 None:intergenic 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG + Chr2:83470222-83470241 MsG0280011399.01.T01:CDS 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG - Chr2:83471294-83471313 None:intergenic 35.0%
!! GTAGTTGGTGAATGATGAAT+GGG - Chr2:83467275-83467294 None:intergenic 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG + Chr2:83471701-83471720 MsG0280011399.01.T01:CDS 35.0%
!! TAGATAAGTTGGTCCACATT+TGG + Chr2:83471459-83471478 MsG0280011399.01.T01:intron 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG + Chr2:83470164-83470183 MsG0280011399.01.T01:CDS 35.0%
!!! ATTGTTTTTGCTCTCTGTGT+TGG + Chr2:83468338-83468357 MsG0280011399.01.T01:intron 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG + Chr2:83469021-83469040 MsG0280011399.01.T01:intron 35.0%
AAGAACGTCAAATAGTTCCG+AGG - Chr2:83471017-83471036 None:intergenic 40.0%
AAGGTTCACTGTGTATGTTG+TGG + Chr2:83470860-83470879 MsG0280011399.01.T01:CDS 40.0%
AATCGTGAGGTGGTAAAACA+AGG + Chr2:83471047-83471066 MsG0280011399.01.T01:CDS 40.0%
AATGTACGCCCTTCCAATTA+AGG - Chr2:83469485-83469504 None:intergenic 40.0%
ACAATCAACAACGACGTACA+TGG - Chr2:83469205-83469224 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG - Chr2:83469761-83469780 None:intergenic 40.0%
ACGACGTACATGGGAAATAA+AGG - Chr2:83469195-83469214 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG + Chr2:83471106-83471125 MsG0280011399.01.T01:CDS 40.0%
AGTCTACCCTAAAACGAACA+AGG - Chr2:83469015-83469034 None:intergenic 40.0%
AGTGAGTTGCCAAATGAAGT+GGG + Chr2:83470189-83470208 MsG0280011399.01.T01:CDS 40.0%
AGTGTGAGCAATGACTGTAA+TGG + Chr2:83472118-83472137 MsG0280011399.01.T01:three_prime_UTR 40.0%
ATATCGCCAATTGTATGGCT+AGG + Chr2:83468461-83468480 MsG0280011399.01.T01:intron 40.0%
ATCATCAGGGAAAGTTACTG+GGG - Chr2:83470526-83470545 None:intergenic 40.0%
ATGTTTCAAAAGACCGCAAC+TGG + Chr2:83469620-83469639 MsG0280011399.01.T01:CDS 40.0%
ATTCTTCACTTTCTGGGTGA+AGG - Chr2:83471836-83471855 None:intergenic 40.0%
CAATAGAAAAAGGTGGTCCT+AGG + Chr2:83470355-83470374 MsG0280011399.01.T01:CDS 40.0%
CAATCAACAACGACGTACAT+GGG - Chr2:83469204-83469223 None:intergenic 40.0%
CACAAACCTAACAAAGATCC+AGG - Chr2:83468894-83468913 None:intergenic 40.0%
CACACAAAGACAAGGTTGTA+AGG + Chr2:83469693-83469712 MsG0280011399.01.T01:CDS 40.0%
CAGTTCAGGCAATATTAGAC+TGG + Chr2:83470919-83470938 MsG0280011399.01.T01:CDS 40.0%
CCCAATATTTGTCAGCAATC+TGG - Chr2:83471875-83471894 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG - Chr2:83469760-83469779 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG + Chr2:83470345-83470364 MsG0280011399.01.T01:CDS 40.0%
CTAAAGCTGGGCTTATTAGT+GGG + Chr2:83470628-83470647 MsG0280011399.01.T01:CDS 40.0%
CTATGAACTCCTACCATCAA+AGG - Chr2:83471591-83471610 None:intergenic 40.0%
CTCCTGCAAGTTGTATATTG+GGG - Chr2:83469759-83469778 None:intergenic 40.0%
GAACTCAAAGGAAACAAACC+TGG + Chr2:83468873-83468892 MsG0280011399.01.T01:intron 40.0%
GATCATCAGGGAAAGTTACT+GGG - Chr2:83470527-83470546 None:intergenic 40.0%
GCTCGCATATAATCTGAATC+AGG - Chr2:83471101-83471120 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG + Chr2:83469685-83469704 MsG0280011399.01.T01:CDS 40.0%
GGAGACCTACTAAATAGGAA+AGG - Chr2:83471273-83471292 None:intergenic 40.0%
GGTATTAAGCCTGAAGACAT+TGG + Chr2:83470774-83470793 MsG0280011399.01.T01:CDS 40.0%
GGTCTCCTTTCCTATTTAGT+AGG + Chr2:83471265-83471284 MsG0280011399.01.T01:intron 40.0%
GGTGAATGATGAATGGGAAA+AGG - Chr2:83467269-83467288 None:intergenic 40.0%
GGTGCTTCAATAGAAAAAGG+TGG + Chr2:83470348-83470367 MsG0280011399.01.T01:CDS 40.0%
GTTCATGCCAAGATGATGAT+AGG + Chr2:83471149-83471168 MsG0280011399.01.T01:CDS 40.0%
TACTATATGATGAGCGAGTG+AGG - Chr2:83471335-83471354 None:intergenic 40.0%
TAGAAGCCTAGCCATACAAT+TGG - Chr2:83468470-83468489 None:intergenic 40.0%
TAGAGATGAAGCCAAAACAG+TGG - Chr2:83467922-83467941 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG - Chr2:83471683-83471702 None:intergenic 40.0%
TATTTGACGTTCTTCTGCCT+TGG + Chr2:83471023-83471042 MsG0280011399.01.T01:CDS 40.0%
TCACATTTACTGTGCCCATT+TGG + Chr2:83469411-83469430 MsG0280011399.01.T01:CDS 40.0%
TCAGGGAAGAATTCAAATCC+TGG - Chr2:83471993-83472012 None:intergenic 40.0%
TCGGAAAAGTGAATGAAACG+GGG - Chr2:83470280-83470299 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG - Chr2:83470528-83470547 None:intergenic 40.0%
TGGTGAGGAAATAGATAGGT+GGG + Chr2:83469525-83469544 MsG0280011399.01.T01:CDS 40.0%
TGGTGGTAACATTCTTTCCA+AGG + Chr2:83467514-83467533 MsG0280011399.01.T01:CDS 40.0%
TGTTAGCAAGATTGAAGCTG+GGG + Chr2:83470836-83470855 MsG0280011399.01.T01:CDS 40.0%
TGTTTCAAAAGACCGCAACT+GGG + Chr2:83469621-83469640 MsG0280011399.01.T01:CDS 40.0%
TTAACTTTGAGCAGAGATGG+AGG + Chr2:83470436-83470455 MsG0280011399.01.T01:CDS 40.0%
TTACCAGCCTCATAGATGTT+GGG + Chr2:83469786-83469805 MsG0280011399.01.T01:CDS 40.0%
TTTCATCAGCCTAACTTTCC+TGG + Chr2:83470327-83470346 MsG0280011399.01.T01:CDS 40.0%
TTTCCTTGGTAAGGGATTCA+AGG + Chr2:83469881-83469900 MsG0280011399.01.T01:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG + Chr2:83469280-83469299 MsG0280011399.01.T01:CDS 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG + Chr2:83468225-83468244 MsG0280011399.01.T01:intron 40.0%
! AGGAGCATGTTAATCCTCAA+TGG + Chr2:83469377-83469396 MsG0280011399.01.T01:CDS 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG + Chr2:83468226-83468245 MsG0280011399.01.T01:intron 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG - Chr2:83470339-83470358 None:intergenic 40.0%
! ATTGAAGCACTCAATGCCAA+GGG + Chr2:83470978-83470997 MsG0280011399.01.T01:CDS 40.0%
! CAAAACTTTGAGGAGACAGT+TGG + Chr2:83469274-83469293 MsG0280011399.01.T01:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+TGG + Chr2:83469334-83469353 MsG0280011399.01.T01:CDS 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG + Chr2:83467908-83467927 MsG0280011399.01.T01:intron 40.0%
! TAGAAAGCATAAGGAACTCC+AGG - Chr2:83469673-83469692 None:intergenic 40.0%
! TATTGAAGCACTCAATGCCA+AGG + Chr2:83470977-83470996 MsG0280011399.01.T01:CDS 40.0%
! TGTCTGGGATATGAGAATCT+TGG - Chr2:83469729-83469748 None:intergenic 40.0%
! TGTTTGGGATGATAGAACGT+CGG + Chr2:83469984-83470003 MsG0280011399.01.T01:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG - Chr2:83467534-83467553 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG + Chr2:83469502-83469521 MsG0280011399.01.T01:CDS 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG - Chr2:83470348-83470367 None:intergenic 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG + Chr2:83468086-83468105 MsG0280011399.01.T01:intron 40.0%
!! TCATTCACTTTTCCGAACTC+TGG + Chr2:83470284-83470303 MsG0280011399.01.T01:CDS 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG + Chr2:83468090-83468109 MsG0280011399.01.T01:intron 40.0%
AAGTAGTAAGTATGGGTGGG+AGG - Chr2:83472052-83472071 None:intergenic 45.0%
ACAATGCTTCCACCATCATC+CGG - Chr2:83470111-83470130 None:intergenic 45.0%
ACATCCTCCCAACATCTATG+AGG - Chr2:83469796-83469815 None:intergenic 45.0%
ACTCAATGCCAAGGGAATTG+AGG + Chr2:83470986-83471005 MsG0280011399.01.T01:CDS 45.0%
AGGATCTTCCTCAATTCCCT+TGG - Chr2:83470997-83471016 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG + Chr2:83470925-83470944 MsG0280011399.01.T01:CDS 45.0%
AGGGAATTGAGGAAGATCCT+CGG + Chr2:83470997-83471016 MsG0280011399.01.T01:CDS 45.0%
AGGTTTCTTGAAGCATGCCA+AGG - Chr2:83471812-83471831 None:intergenic 45.0%
ATATCATGCCAAGGTTCCCT+AGG - Chr2:83470375-83470394 None:intergenic 45.0%
ATCCTTATCGAAGCCTCTGA+TGG + Chr2:83468930-83468949 MsG0280011399.01.T01:intron 45.0%
ATGGCGCAAATTCTGCTACA+TGG + Chr2:83467443-83467462 MsG0280011399.01.T01:CDS 45.0%
CAATATTAGACTGGCAGAGG+AGG + Chr2:83470928-83470947 MsG0280011399.01.T01:CDS 45.0%
CAGTGAGTTGCCAAATGAAG+TGG + Chr2:83470188-83470207 MsG0280011399.01.T01:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG - Chr2:83469472-83469491 None:intergenic 45.0%
CCCAATATACAACTTGCAGG+AGG + Chr2:83469757-83469776 MsG0280011399.01.T01:CDS 45.0%
CCTATTGGGGCAACCTTAAT+TGG + Chr2:83469469-83469488 MsG0280011399.01.T01:CDS 45.0%
CCTGAACTGATGCACTTTCT+GGG - Chr2:83470908-83470927 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG + Chr2:83470616-83470635 MsG0280011399.01.T01:CDS 45.0%
CTTACCAGCCTCATAGATGT+TGG + Chr2:83469785-83469804 MsG0280011399.01.T01:CDS 45.0%
CTTGAGTGGATATCATGCCA+AGG - Chr2:83470384-83470403 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG + Chr2:83470382-83470401 MsG0280011399.01.T01:CDS 45.0%
GAAACTGAGGAATTCTTCCG+AGG + Chr2:83470051-83470070 MsG0280011399.01.T01:CDS 45.0%
GAGACAGTTGGATTCGGAAA+AGG + Chr2:83469286-83469305 MsG0280011399.01.T01:CDS 45.0%
GATATCCACTCAAGGCTTGA+AGG + Chr2:83470390-83470409 MsG0280011399.01.T01:CDS 45.0%
GATGGTAGGAGTTCATAGTG+TGG + Chr2:83471593-83471612 MsG0280011399.01.T01:intron 45.0%
GCTAAAGCTGGGCTTATTAG+TGG + Chr2:83470627-83470646 MsG0280011399.01.T01:CDS 45.0%
GGGCAAATGATTCATCACCT+TGG + Chr2:83468429-83468448 MsG0280011399.01.T01:intron 45.0%
GTCCCCAATATACAACTTGC+AGG + Chr2:83469754-83469773 MsG0280011399.01.T01:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG + Chr2:83469524-83469543 MsG0280011399.01.T01:CDS 45.0%
TACTGGGGATGGGGTAATAA+TGG - Chr2:83470511-83470530 None:intergenic 45.0%
TCCACGTCTCTTGATCATCA+GGG - Chr2:83470539-83470558 None:intergenic 45.0%
TCCTTATCGAAGCCTCTGAT+GGG + Chr2:83468931-83468950 MsG0280011399.01.T01:intron 45.0%
TGAATTCTTCCCTGACACCA+AGG + Chr2:83471998-83472017 MsG0280011399.01.T01:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG + Chr2:83469474-83469493 MsG0280011399.01.T01:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG + Chr2:83469521-83469540 MsG0280011399.01.T01:CDS 45.0%
TGTATGTTGTGGTTCCCATG+TGG + Chr2:83470871-83470890 MsG0280011399.01.T01:CDS 45.0%
TTACTGTGCCCATTTGGCAT+CGG + Chr2:83469417-83469436 MsG0280011399.01.T01:CDS 45.0%
TTCACTTTCTGGGTGAAGGA+AGG - Chr2:83471832-83471851 None:intergenic 45.0%
TTCCACGTCTCTTGATCATC+AGG - Chr2:83470540-83470559 None:intergenic 45.0%
TTGGGGCAACCTTAATTGGA+AGG + Chr2:83469473-83469492 MsG0280011399.01.T01:CDS 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG + Chr2:83468231-83468250 MsG0280011399.01.T01:intron 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG + Chr2:83469501-83469520 MsG0280011399.01.T01:CDS 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG - Chr2:83471086-83471105 None:intergenic 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG + Chr2:83468221-83468240 MsG0280011399.01.T01:intron 45.0%
! TAGAGAAAGCACGAGTTGGA+AGG + Chr2:83469338-83469357 MsG0280011399.01.T01:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG - Chr2:83470786-83470805 None:intergenic 45.0%
!! CATTTTAATGTCAGGCCGAC+AGG - Chr2:83468744-83468763 None:intergenic 45.0%
ACCTTCTCCGCTATCCCATT+GGG + Chr2:83471937-83471956 MsG0280011399.01.T01:CDS 50.0%
ACTCTTGAGCATGATCTCCC+TGG + Chr2:83471912-83471931 MsG0280011399.01.T01:CDS 50.0%
AGCAGCATCTTCAGGAGTCT+CGG - Chr2:83470610-83470629 None:intergenic 50.0%
AGCTAATAGGCAGCCTGCAA+GGG + Chr2:83471746-83471765 MsG0280011399.01.T01:CDS 50.0%
AGCTGGGCTTATTAGTGGGA+AGG + Chr2:83470632-83470651 MsG0280011399.01.T01:CDS 50.0%
AGGGAAAGTTACTGGGGATG+GGG - Chr2:83470520-83470539 None:intergenic 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG + Chr2:83470452-83470471 MsG0280011399.01.T01:CDS 50.0%
ATGGTTTCCGCATGTCGTTG+TGG + Chr2:83471778-83471797 MsG0280011399.01.T01:CDS 50.0%
ATTGACGGTGGAGCAGCTTT+CGG + Chr2:83470579-83470598 MsG0280011399.01.T01:CDS 50.0%
CAGGGAAAGTTACTGGGGAT+GGG - Chr2:83470521-83470540 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG - Chr2:83469887-83469906 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG + Chr2:83470615-83470634 MsG0280011399.01.T01:CDS 50.0%
CCTTCACTGGAAACCCCAAT+GGG - Chr2:83471954-83471973 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG + Chr2:83469884-83469903 MsG0280011399.01.T01:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG - Chr2:83470299-83470318 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG + Chr2:83470841-83470860 MsG0280011399.01.T01:CDS 50.0%
GCATCTTCAAGCTCTCTCAG+AGG - Chr2:83470489-83470508 None:intergenic 50.0%
GCCTGAACTGATGCACTTTC+TGG - Chr2:83470909-83470928 None:intergenic 50.0%
GCTCATACCACAACGACATG+CGG - Chr2:83471788-83471807 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG + Chr2:83470404-83470423 MsG0280011399.01.T01:CDS 50.0%
TAATGCCTAGAGCCCAGTTG+CGG - Chr2:83469636-83469655 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG + Chr2:83471745-83471764 MsG0280011399.01.T01:CDS 50.0%
TCAGGGAAAGTTACTGGGGA+TGG - Chr2:83470522-83470541 None:intergenic 50.0%
TCCACGCATAGCAACTTCCA+AGG - Chr2:83470746-83470765 None:intergenic 50.0%
TCCCATCAGAGGCTTCGATA+AGG - Chr2:83468935-83468954 None:intergenic 50.0%
TCCCTGATGATCAAGAGACG+TGG + Chr2:83470535-83470554 MsG0280011399.01.T01:CDS 50.0%
TCCTTCACTGGAAACCCCAA+TGG - Chr2:83471955-83471974 None:intergenic 50.0%
TCCTTGGAAGTTGCTATGCG+TGG + Chr2:83470742-83470761 MsG0280011399.01.T01:CDS 50.0%
TCGTTGTGGTATGAGCACCT+TGG + Chr2:83471792-83471811 MsG0280011399.01.T01:CDS 50.0%
TGGAAACCCCAATGGGATAG+CGG - Chr2:83471947-83471966 None:intergenic 50.0%
TGTCTTATGCCCTCGCAATC+CGG + Chr2:83470089-83470108 MsG0280011399.01.T01:CDS 50.0%
TTACCACCTCACGATTGCCA+AGG - Chr2:83471043-83471062 None:intergenic 50.0%
! AAGGGCGTACATTCCTGTTG+AGG + Chr2:83469492-83469511 MsG0280011399.01.T01:CDS 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG - Chr2:83470618-83470637 None:intergenic 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG + Chr2:83470905-83470924 MsG0280011399.01.T01:CDS 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG - Chr2:83471083-83471102 None:intergenic 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG + Chr2:83470243-83470262 MsG0280011399.01.T01:CDS 50.0%
!! TGAAGCACTGACACAGACAC+CGG + Chr2:83467661-83467680 MsG0280011399.01.T01:intron 50.0%
AAAGACCGCAACTGGGCTCT+AGG + Chr2:83469628-83469647 MsG0280011399.01.T01:CDS 55.0%
AAGGTGGTCCTAGGGAACCT+TGG + Chr2:83470364-83470383 MsG0280011399.01.T01:CDS 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG + Chr2:83472014-83472033 MsG0280011399.01.T01:CDS 55.0%
AGACTGGCAGAGGAGGACAA+TGG + Chr2:83470935-83470954 MsG0280011399.01.T01:CDS 55.0%
ATATGCGAGCTCAAGAGGCC+AGG + Chr2:83471111-83471130 MsG0280011399.01.T01:CDS 55.0%
CACAGTGCACTTCAGAGCCT+CGG - Chr2:83470071-83470090 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG - Chr2:83470101-83470120 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG + Chr2:83471936-83471955 MsG0280011399.01.T01:CDS 55.0%
CAGAGATGGAGGAAGCAAGG+TGG + Chr2:83470447-83470466 MsG0280011399.01.T01:CDS 55.0%
CAGCATCTTCAGGAGTCTCG+GGG - Chr2:83470608-83470627 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG - Chr2:83469916-83469935 None:intergenic 55.0%
CCACCCAATACCTCCTCAAC+AGG - Chr2:83469508-83469527 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG + Chr2:83469789-83469808 MsG0280011399.01.T01:CDS 55.0%
CCAGGAGGAGACATCACACT+TGG + Chr2:83469913-83469932 MsG0280011399.01.T01:CDS 55.0%
CCATGAATCTGACCCCTTGC+AGG - Chr2:83471762-83471781 None:intergenic 55.0%
CCCATTGGGGTTTCCAGTGA+AGG + Chr2:83471951-83471970 MsG0280011399.01.T01:CDS 55.0%
CCTCCCAACATCTATGAGGC+TGG - Chr2:83469792-83469811 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG + Chr2:83471759-83471778 MsG0280011399.01.T01:CDS 55.0%
CCTTCTCCGCTATCCCATTG+GGG + Chr2:83471938-83471957 MsG0280011399.01.T01:CDS 55.0%
CTCTGTCACGCTTCCTTCAC+TGG - Chr2:83471967-83471986 None:intergenic 55.0%
CTTCTGCCTTGGCAATCGTG+AGG + Chr2:83471034-83471053 MsG0280011399.01.T01:CDS 55.0%
GACACCAAGGCTCGTGTTCT+TGG + Chr2:83472011-83472030 MsG0280011399.01.T01:CDS 55.0%
GAGCAGAGATGGAGGAAGCA+AGG + Chr2:83470444-83470463 MsG0280011399.01.T01:CDS 55.0%
GATTCAAGGAGGCCAAAGCC+AGG + Chr2:83469895-83469914 MsG0280011399.01.T01:CDS 55.0%
GCAGCATCTTCAGGAGTCTC+GGG - Chr2:83470609-83470628 None:intergenic 55.0%
GCTAATAGGCAGCCTGCAAG+GGG + Chr2:83471747-83471766 MsG0280011399.01.T01:CDS 55.0%
GGCGTACATTCCTGTTGAGG+AGG + Chr2:83469495-83469514 MsG0280011399.01.T01:CDS 55.0%
GGCTTGAAGGTCCCATTGCT+TGG + Chr2:83470403-83470422 MsG0280011399.01.T01:CDS 55.0%
GTGATGTCTCCTCCTGGCTT+TGG - Chr2:83469910-83469929 None:intergenic 55.0%
TGGGACCTTCAAGCCTTGAG+TGG - Chr2:83470398-83470417 None:intergenic 55.0%
TTGACGGTGGAGCAGCTTTC+GGG + Chr2:83470580-83470599 MsG0280011399.01.T01:CDS 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG - Chr2:83472011-83472030 None:intergenic 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG - Chr2:83471938-83471957 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG + Chr2:83469505-83469524 MsG0280011399.01.T01:CDS 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG - Chr2:83472010-83472029 None:intergenic 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG + Chr2:83469510-83469529 MsG0280011399.01.T01:CDS 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG + Chr2:83470753-83470772 MsG0280011399.01.T01:CDS 55.0%
!! TGGTGGTTGGGATTGGTCCA+TGG + Chr2:83468238-83468257 MsG0280011399.01.T01:intron 55.0%
CCACCATCATCCGGATTGCG+AGG - Chr2:83470102-83470121 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG + Chr2:83471037-83471056 MsG0280011399.01.T01:CDS 60.0%
GTGGTTCCCATGTGGCCTGA+GGG + Chr2:83470879-83470898 MsG0280011399.01.T01:CDS 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG + Chr2:83469898-83469917 MsG0280011399.01.T01:CDS 60.0%
TCCGCCAAGAACACGAGCCT+TGG - Chr2:83472018-83472037 None:intergenic 60.0%
TGACACAGACACCGGACGGA+TGG + Chr2:83467669-83467688 MsG0280011399.01.T01:intron 60.0%
TGCCCTCGCAATCCGGATGA+TGG + Chr2:83470096-83470115 MsG0280011399.01.T01:CDS 60.0%
TGCTGACGTGTCCATCCGTC+CGG - Chr2:83467683-83467702 None:intergenic 60.0%
TGTGGTTCCCATGTGGCCTG+AGG + Chr2:83470878-83470897 MsG0280011399.01.T01:CDS 60.0%
! CCTCGCAATCCGGATGATGG+TGG + Chr2:83470099-83470118 MsG0280011399.01.T01:CDS 60.0%
! GCACTGACACAGACACCGGA+CGG + Chr2:83467665-83467684 MsG0280011399.01.T01:intron 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG - Chr2:83471941-83471960 None:intergenic 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG - Chr2:83471932-83471951 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+AGG - Chr2:83470897-83470916 None:intergenic 60.0%
GGGACACCCTCAGGCCACAT+GGG - Chr2:83470888-83470907 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG - Chr2:83470889-83470908 None:intergenic 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG + Chr2:83471972-83471991 MsG0280011399.01.T01:CDS 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG - Chr2:83471933-83471952 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 83467263 83472341 83467263 ID=MsG0280011399.01;Name=MsG0280011399.01
Chr2 mRNA 83467263 83472341 83467263 ID=MsG0280011399.01.T01;Parent=MsG0280011399.01;Name=MsG0280011399.01.T01;_AED=0.48;_eAED=0.48;_QI=73|1|1|1|0.66|0.5|4|268|809
Chr2 exon 83467263 83467328 83467263 ID=MsG0280011399.01.T01:exon:12742;Parent=MsG0280011399.01.T01
Chr2 exon 83467436 83467535 83467436 ID=MsG0280011399.01.T01:exon:12743;Parent=MsG0280011399.01.T01
Chr2 exon 83469268 83471170 83469268 ID=MsG0280011399.01.T01:exon:12744;Parent=MsG0280011399.01.T01
Chr2 exon 83471640 83472341 83471640 ID=MsG0280011399.01.T01:exon:12745;Parent=MsG0280011399.01.T01
Chr2 five_prime_UTR 83467263 83467328 83467263 ID=MsG0280011399.01.T01:five_prime_utr;Parent=MsG0280011399.01.T01
Chr2 five_prime_UTR 83467436 83467442 83467436 ID=MsG0280011399.01.T01:five_prime_utr;Parent=MsG0280011399.01.T01
Chr2 CDS 83467443 83467535 83467443 ID=MsG0280011399.01.T01:cds;Parent=MsG0280011399.01.T01
Chr2 CDS 83469268 83471170 83469268 ID=MsG0280011399.01.T01:cds;Parent=MsG0280011399.01.T01
Chr2 CDS 83471640 83472073 83471640 ID=MsG0280011399.01.T01:cds;Parent=MsG0280011399.01.T01
Chr2 three_prime_UTR 83472074 83472341 83472074 ID=MsG0280011399.01.T01:three_prime_utr;Parent=MsG0280011399.01.T01
Gene Sequence

>MsG0280011399.01.T01

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGATAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTTGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACGTGGAATGTTCAGCTATTTAGATCTATTGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGACGTTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>MsG0280011399.01.T01

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLTFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT*