AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000101.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000101.01.T01 MTR_1g023500 75.110 912 65 11 105 894 324 1195 0.0 1315
MsG0180000101.01.T01 MTR_1g023500 67.785 149 2 1 2 104 109 257 3.51e-48 186
MsG0180000101.01.T01 MTR_8g023445 38.283 734 337 14 254 878 1271 1997 3.31e-140 460
MsG0180000101.01.T01 MTR_3g105990 34.859 743 349 11 260 881 458 1186 2.00e-126 410
MsG0180000101.01.T01 MTR_4g124030 29.568 717 362 18 283 874 476 1174 3.50e-77 274
MsG0180000101.01.T01 MTR_0002s0510 23.176 699 425 20 273 874 426 1109 2.85e-36 149
MsG0180000101.01.T01 MTR_4g051130 25.522 431 243 9 525 892 641 1056 1.16e-32 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000101.01.T01 AT4G21710 70.374 908 107 11 105 890 321 1188 0.0 1224
MsG0180000101.01.T01 AT4G21710 65.772 149 5 1 2 104 106 254 5.23e-47 182
MsG0180000101.01.T01 AT5G45140 36.364 748 344 12 259 882 421 1160 1.63e-143 455
MsG0180000101.01.T01 AT5G45140 36.364 748 344 12 259 882 421 1160 1.63e-143 455
MsG0180000101.01.T01 AT3G18090 35.095 738 349 13 260 881 330 1053 9.19e-125 403
MsG0180000101.01.T01 AT3G23780 34.735 737 352 14 260 881 448 1170 7.75e-124 403
MsG0180000101.01.T01 AT3G23780 34.735 737 352 14 260 881 448 1170 7.75e-124 403
MsG0180000101.01.T01 AT1G29940 28.630 730 385 17 283 888 461 1178 5.55e-77 273
MsG0180000101.01.T01 AT3G18090 33.272 544 256 11 260 710 330 859 2.65e-74 262
MsG0180000101.01.T01 AT3G18090 33.272 544 256 11 260 710 330 859 3.86e-74 261
MsG0180000101.01.T01 AT5G45140 33.499 403 186 8 259 587 421 815 6.06e-55 205
MsG0180000101.01.T01 ATCG00190 27.701 361 198 7 525 822 656 1016 1.80e-31 133

Find 270 sgRNAs with CRISPR-Local

Find 692 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCATCCATCACTGATTT+TGG 0.116658 1:-1432549 MsG0180000101.01.T01:CDS
ATCAGGCTCCTTTCTTCTTT+TGG 0.174870 1:+1429858 None:intergenic
ACTCTTGTCAAAGAAGATTT+TGG 0.189211 1:-1431818 MsG0180000101.01.T01:intron
ACCTCTTTAGTAAGCATTCT+TGG 0.208895 1:+1429896 None:intergenic
TTCTGCTTATTTGAAGAAAA+AGG 0.217830 1:-1439029 MsG0180000101.01.T01:five_prime_UTR
CGTCTTCCTCTTCCATTTGC+TGG 0.232324 1:+1439092 None:intergenic
TGGGTTAAGAGGTATGTTTC+AGG 0.247868 1:+1429605 None:intergenic
ATGCTTCAACCTTTGGTAAT+AGG 0.250696 1:+1430374 None:intergenic
GCATGGTTCTTATGATAAAT+TGG 0.252027 1:-1431691 MsG0180000101.01.T01:CDS
TATTGTTCATTGTATTTATA+CGG 0.254638 1:+1429418 None:intergenic
GTGGCCATTTCATGTTATTC+TGG 0.256038 1:-1432037 MsG0180000101.01.T01:CDS
GTATCAGAATATGCTTCTTC+TGG 0.286298 1:+1432587 None:intergenic
AAAATACTCACTTGTCCTTC+TGG 0.287121 1:+1434140 None:intergenic
CAGGTTGCACTTGATTATAT+TGG 0.290828 1:-1435677 MsG0180000101.01.T01:CDS
GATCAAACAGTCTTTCCTTT+AGG 0.305989 1:+1430205 None:intergenic
TTCAGCAGCATATCCTATTC+TGG 0.311071 1:-1433983 MsG0180000101.01.T01:CDS
TGAACAAATGATGATGGATT+TGG 0.312337 1:-1439134 MsG0180000101.01.T01:five_prime_UTR
TCTGGTGAGGATGTTATTAT+TGG 0.320139 1:-1431546 MsG0180000101.01.T01:CDS
TGTTTATCCACAATGAATAA+AGG 0.325748 1:+1432981 None:intergenic
CTGCGCATATATACAGATTA+TGG 0.328114 1:-1433017 MsG0180000101.01.T01:CDS
TTCCTAAGCCTAGCAGCTTT+AGG 0.332431 1:+1437845 None:intergenic
CTTACAGTAACATCTGTAAA+AGG 0.337964 1:+1430933 None:intergenic
TCACAGCCCAAGCATCTTCT+TGG 0.340662 1:+1439053 None:intergenic
TGTGGATTGACAATAATATC+AGG 0.342341 1:+1431046 None:intergenic
CACCCAAACAAAACGCATTC+AGG 0.346587 1:+1429469 None:intergenic
CAATAGACCGTGGCTTCTTT+CGG 0.354605 1:-1431976 MsG0180000101.01.T01:intron
CCCACATAAGCATACTTGTT+AGG 0.355406 1:+1436821 None:intergenic
GACCTGGCAGGTCCTTTACT+TGG 0.355932 1:-1435284 MsG0180000101.01.T01:CDS
CGGCTACTTCTGTGCGCACT+TGG 0.356082 1:-1435353 MsG0180000101.01.T01:CDS
CAACCATATGCTTCAACCTT+TGG 0.356626 1:+1430367 None:intergenic
AATGTCCTAACCAACATATC+AGG 0.360678 1:+1433765 None:intergenic
ACTCACTTGCTACTGGTAAT+GGG 0.362625 1:-1434947 MsG0180000101.01.T01:CDS
TGTTTGTGCGCATGCTCTCT+CGG 0.371135 1:-1436751 MsG0180000101.01.T01:CDS
CGTGATGGAGGTCTTCGATT+TGG 0.372874 1:-1430273 MsG0180000101.01.T01:CDS
TTGCTTTGATAGCAAATTGC+AGG 0.373151 1:+1434995 None:intergenic
CTCTCTCGGGCTAGTGCAAA+AGG 0.375896 1:-1436737 MsG0180000101.01.T01:CDS
GGCAAAATAACGAGGAAAAC+TGG 0.376797 1:+1429303 None:intergenic
TACTCACTTGCTACTGGTAA+TGG 0.377836 1:-1434948 MsG0180000101.01.T01:CDS
GAAGATGATAGGGATCATTA+TGG 0.380040 1:-1435320 MsG0180000101.01.T01:CDS
CCATCAGATTCCGTCATCAT+TGG 0.381582 1:+1437885 None:intergenic
GGTGAAGAATCTGGCCTTGA+TGG 0.390834 1:-1434022 MsG0180000101.01.T01:CDS
AGTTTACGCCATAGTGAAAC+TGG 0.391101 1:-1431450 MsG0180000101.01.T01:CDS
TTGATGTTAATACTGAAGTT+GGG 0.392600 1:-1433067 MsG0180000101.01.T01:CDS
TCTAACTACCTCAGCGAAAT+CGG 0.395109 1:+1438884 None:intergenic
TTACCAAAGGTTGAAGCATA+TGG 0.395470 1:-1430370 MsG0180000101.01.T01:CDS
CTACTATTCCAGTTTCACTA+TGG 0.397112 1:+1431442 None:intergenic
GGCGGAGGGCTGAAGATGAT+AGG 0.397377 1:-1435331 MsG0180000101.01.T01:CDS
CGAAGATTGAATTCTCCTAT+AGG 0.398531 1:-1434743 MsG0180000101.01.T01:CDS
CTGTGGACTGGTGAAGAATC+TGG 0.401471 1:-1434031 MsG0180000101.01.T01:CDS
TTCTGTGCGCACTTGGGCGG+AGG 0.402357 1:-1435346 MsG0180000101.01.T01:CDS
CGAATTTGAACAAATGATGA+TGG 0.407022 1:-1439140 MsG0180000101.01.T01:five_prime_UTR
ACCTGATTGTGGTCAGGAAA+TGG 0.407698 1:+1432506 None:intergenic
CCAGGATTATGCTGAGATTC+GGG 0.408643 1:+1438915 None:intergenic
TTCAAGAGGTAGAAGGTTAT+AGG 0.415319 1:+1435052 None:intergenic
GACATGCCCTGGACTGTAGA+AGG 0.418551 1:-1431076 MsG0180000101.01.T01:CDS
GCCAGGATTATGCTGAGATT+CGG 0.418840 1:+1438914 None:intergenic
GGTTTATTCTTGAACTAGAA+AGG 0.422164 1:+1429626 None:intergenic
TACATTACCAGATGCGATAT+AGG 0.422509 1:+1429559 None:intergenic
CAATTACCTTCACGTCCTAT+AGG 0.424102 1:+1434728 None:intergenic
ATAACCAGAATAACATGAAA+TGG 0.429288 1:+1432033 None:intergenic
TCAGTAGCCTTTCAAGTGTT+GGG 0.432696 1:-1429704 MsG0180000101.01.T01:intron
CTTAAAGACATAGACATGAT+TGG 0.434546 1:+1436853 None:intergenic
CTCGCTTCCTATATCGCATC+TGG 0.435756 1:-1429566 MsG0180000101.01.T01:three_prime_UTR
GTTGATGTTAATACTGAAGT+TGG 0.437128 1:-1433068 MsG0180000101.01.T01:CDS
GAACAAAACTGACATTGTTC+AGG 0.439610 1:-1430088 MsG0180000101.01.T01:intron
CATTCATTCTTTGCAGCAAA+GGG 0.440049 1:-1432934 MsG0180000101.01.T01:intron
TTGTCTCAAAACCACGCATT+TGG 0.441327 1:+1430451 None:intergenic
TCAGTCTGCTATGGGAAAAC+AGG 0.442211 1:-1432379 MsG0180000101.01.T01:CDS
TCTAAGAGGGTCATTAAGAA+AGG 0.442549 1:-1437788 MsG0180000101.01.T01:CDS
TTCGTAAATGGTTGCTGGAT+GGG 0.443022 1:-1433801 MsG0180000101.01.T01:CDS
ATTATGCAGCTGTCTTGGTT+TGG 0.447375 1:+1434196 None:intergenic
CGAGGTAGTGATGAGGCTAC+TGG 0.448765 1:+1429585 None:intergenic
TGAACAATACCATTCGAAAC+TGG 0.450071 1:+1432331 None:intergenic
TCACGTGACCGCCCCTCAGC+AGG 0.450469 1:+1430291 None:intergenic
ATGGTGCAGTGTGTTGATAA+TGG 0.455789 1:-1435030 MsG0180000101.01.T01:CDS
GCTGCTCTTCCAAGAGCTAA+TGG 0.455955 1:-1429933 MsG0180000101.01.T01:CDS
ATCAGTAGCCTTTCAAGTGT+TGG 0.458400 1:-1429705 MsG0180000101.01.T01:intron
GATGAGGCTACTGGGTTAAG+AGG 0.459410 1:+1429594 None:intergenic
GCGAAATCGGACTGATGGCC+AGG 0.459680 1:+1438897 None:intergenic
GGTGATGCCTTCTACAGTCC+AGG 0.461573 1:+1431069 None:intergenic
ACGATTTATAAGATAAGCTT+CGG 0.462716 1:-1437927 MsG0180000101.01.T01:five_prime_UTR
TGTTGCTCTTCCTGAGATAG+AGG 0.464497 1:+1431513 None:intergenic
AGTAAGCATTCTTGGAGCTA+TGG 0.468466 1:+1429904 None:intergenic
AGCCACGGTCTATTGATGAT+TGG 0.469458 1:+1431984 None:intergenic
ATACCTTCTCGAATGACAAT+TGG 0.469660 1:-1431019 MsG0180000101.01.T01:CDS
TCCAAGAATGCTTACTAAAG+AGG 0.470301 1:-1429897 MsG0180000101.01.T01:CDS
TGGTGCAGTGTGTTGATAAT+GGG 0.471555 1:-1435029 MsG0180000101.01.T01:CDS
TGGCCATAGCCATTAGCTCT+TGG 0.472606 1:+1429924 None:intergenic
AATACAATGAACAATACATA+TGG 0.473339 1:-1429411 MsG0180000101.01.T01:three_prime_UTR
GAAAGTTGACTAGAGATGTC+AGG 0.473617 1:-1435139 MsG0180000101.01.T01:CDS
TGGAAATAAGAGGCTGGACC+TGG 0.473901 1:-1435300 MsG0180000101.01.T01:CDS
TGTCCTTCTGGTGTTTCTGC+CGG 0.475033 1:+1434152 None:intergenic
AAACAGGGCACAAGAGTGTC+TGG 0.475708 1:-1431564 MsG0180000101.01.T01:intron
ACCATTTCCTGACCACAATC+AGG 0.477185 1:-1432507 MsG0180000101.01.T01:intron
AAATCACCCAAGAAGATGCT+TGG 0.478143 1:-1439060 MsG0180000101.01.T01:five_prime_UTR
ACCTAACAAGTATGCTTATG+TGG 0.478358 1:-1436822 MsG0180000101.01.T01:CDS
CAGTCGTCCTTTATTCATTG+TGG 0.479150 1:-1432988 MsG0180000101.01.T01:CDS
TGTGAATTATGCAGCTGTCT+TGG 0.480800 1:+1434191 None:intergenic
TGCTAAGGACATCCTTCAAA+AGG 0.481337 1:-1435520 MsG0180000101.01.T01:CDS
ACAGCTGCATAATTCACAAT+GGG 0.482151 1:-1434186 MsG0180000101.01.T01:CDS
AAACGAATTCGACCAGCAAA+TGG 0.482700 1:-1439104 MsG0180000101.01.T01:five_prime_UTR
CAGGCCCTCGTCCACGAGAA+TGG 0.484101 1:+1430334 None:intergenic
TCTTCGCAAGTGTGATAAAG+TGG 0.484935 1:+1434760 None:intergenic
ATATTTACCTGATTGTGGTC+AGG 0.486379 1:+1432500 None:intergenic
GACATTCCATTTATATGTCA+AGG 0.489193 1:-1429655 MsG0180000101.01.T01:three_prime_UTR
TTCCTAAAGCTGCTAGGCTT+AGG 0.490381 1:-1437847 MsG0180000101.01.T01:CDS
CATTGAGAAAGCTGAGACGT+CGG 0.490993 1:-1433746 MsG0180000101.01.T01:CDS
TACCTTGCCAATGAAAACTT+TGG 0.492786 1:+1437727 None:intergenic
CACAGCCCAAGCATCTTCTT+GGG 0.493374 1:+1439054 None:intergenic
TAATACGTATCAGTCTGCTA+TGG 0.493398 1:-1432388 MsG0180000101.01.T01:CDS
GGCTGCCCACATGGAAAAGA+AGG 0.494669 1:-1430966 MsG0180000101.01.T01:CDS
ATGCTTCCCCATGTTGGTGT+TGG 0.495081 1:-1435495 MsG0180000101.01.T01:CDS
AATCACCCAAGAAGATGCTT+GGG 0.495727 1:-1439059 MsG0180000101.01.T01:five_prime_UTR
GTTTGTGCGCATGCTCTCTC+GGG 0.501249 1:-1436750 MsG0180000101.01.T01:CDS
TATTATTTAGGCCTGTGGAC+TGG 0.503091 1:-1434043 MsG0180000101.01.T01:intron
TGCTATGGGAAAACAGGCAA+TGG 0.504068 1:-1432373 MsG0180000101.01.T01:CDS
CTAAAGAGTCCGCCAAGTAA+AGG 0.504424 1:+1435272 None:intergenic
CAGCTTATCGAGTGTATCAT+GGG 0.504678 1:-1430995 MsG0180000101.01.T01:CDS
GCGACCCTGATATGTTGGTT+AGG 0.509462 1:-1433770 MsG0180000101.01.T01:CDS
TTTCGTAAATGGTTGCTGGA+TGG 0.509610 1:-1433802 MsG0180000101.01.T01:CDS
TCAGCTTATCGAGTGTATCA+TGG 0.509852 1:-1430996 MsG0180000101.01.T01:CDS
CATTGTTTCCTAAAGCTGCT+AGG 0.509939 1:-1437853 MsG0180000101.01.T01:CDS
TGTCAGGGGTTATGTGCAAA+AGG 0.510229 1:-1435123 MsG0180000101.01.T01:CDS
ATGCTTATGTGGGTGAAGTT+CGG 0.510668 1:-1436811 MsG0180000101.01.T01:CDS
TCTGTGCGCACTTGGGCGGA+GGG 0.511484 1:-1435345 MsG0180000101.01.T01:CDS
ACAATGTACAATGGTCATAC+AGG 0.512140 1:-1430432 MsG0180000101.01.T01:CDS
AAGATCCATTCTCGTGGACG+AGG 0.512805 1:-1430339 MsG0180000101.01.T01:CDS
CCCGAATCTCAGCATAATCC+TGG 0.513356 1:-1438915 MsG0180000101.01.T01:five_prime_UTR
TGCACCATTCAAGAGGTAGA+AGG 0.514506 1:+1435045 None:intergenic
CTTAAGTACTCACTTGCTAC+TGG 0.514903 1:-1434954 MsG0180000101.01.T01:CDS
TATGATAAATTGGATGATGA+TGG 0.515681 1:-1431681 MsG0180000101.01.T01:CDS
GGCTACTTCTGTGCGCACTT+GGG 0.516303 1:-1435352 MsG0180000101.01.T01:CDS
AAGAGCAGCTTACAAGCATA+AGG 0.518433 1:+1429947 None:intergenic
TGGGCTATTATTTAGGCCTG+TGG 0.518601 1:-1434048 MsG0180000101.01.T01:intron
GGGATCATTATGGAAATAAG+AGG 0.519050 1:-1435310 MsG0180000101.01.T01:CDS
ACTTGGCGGACTCTTTAGAA+TGG 0.520767 1:-1435267 MsG0180000101.01.T01:CDS
CTAAGAGGGTCATTAAGAAA+GGG 0.522466 1:-1437787 MsG0180000101.01.T01:CDS
ATAAAAGACCAAAAGAAGAA+AGG 0.524792 1:-1429866 MsG0180000101.01.T01:CDS
ATTGAGAAAGCTGAGACGTC+GGG 0.524806 1:-1433745 MsG0180000101.01.T01:intron
ATAACCTTCTACCTCTTGAA+TGG 0.525557 1:-1435049 MsG0180000101.01.T01:CDS
GTATGTTGATGTTTCTAAGA+GGG 0.526036 1:-1437801 MsG0180000101.01.T01:CDS
AATAAGAGGCTGGACCTGGC+AGG 0.528479 1:-1435296 MsG0180000101.01.T01:CDS
GTCATTTCCCAACACTTGAA+AGG 0.528559 1:+1429697 None:intergenic
GCTGAGGGGCGGTCACGTGA+TGG 0.528589 1:-1430288 MsG0180000101.01.T01:CDS
TCTCTCGGGCTAGTGCAAAA+GGG 0.530870 1:-1436736 MsG0180000101.01.T01:CDS
TGTGGGTGAAGTTCGGTCCA+TGG 0.531833 1:-1436804 MsG0180000101.01.T01:CDS
AGCAAAGCTTTACACAAATG+TGG 0.532243 1:-1430477 MsG0180000101.01.T01:CDS
TGTATGTTGATGTTTCTAAG+AGG 0.534291 1:-1437802 MsG0180000101.01.T01:CDS
GGGGAAGGTGGCTGCCCACA+TGG 0.534529 1:-1430975 MsG0180000101.01.T01:CDS
CTGGCAGGTCCTTTACTTGG+CGG 0.536896 1:-1435281 MsG0180000101.01.T01:CDS
CTTCCAAGAGCTAATGGCTA+TGG 0.539070 1:-1429927 MsG0180000101.01.T01:CDS
ACATTCATTCTTTGCAGCAA+AGG 0.540642 1:-1432935 MsG0180000101.01.T01:CDS
AATACGTATCAGTCTGCTAT+GGG 0.541188 1:-1432387 MsG0180000101.01.T01:CDS
AATTCGAAGTTCAAATTATG+CGG 0.541633 1:+1439157 None:intergenic
ATACTCTCCAACACCAACAT+GGG 0.542034 1:+1435488 None:intergenic
CGTGATTGCATGATTGCTCA+TGG 0.542766 1:-1430240 MsG0180000101.01.T01:CDS
GCTATGGGAAAACAGGCAAT+GGG 0.544962 1:-1432372 MsG0180000101.01.T01:CDS
CAGTAGTAGACACGGTCAGA+AGG 0.545602 1:-1431128 MsG0180000101.01.T01:CDS
CAAAGGAATCAAGCTGTTGA+CGG 0.546151 1:+1439000 None:intergenic
TCTTACAAGGCAACCTGCTG+AGG 0.547845 1:-1430304 MsG0180000101.01.T01:CDS
CAGATTCTTCACCAGTCCAC+AGG 0.550341 1:+1434032 None:intergenic
GTCATTAAGAAAGGGCATGA+TGG 0.550930 1:-1437779 MsG0180000101.01.T01:CDS
AACAGGATCTTGTACAAGCA+AGG 0.552112 1:-1432616 MsG0180000101.01.T01:intron
ATACCATATTTACCTGATTG+TGG 0.553223 1:+1432495 None:intergenic
CACCCAAAATCAGTGATGGA+TGG 0.554350 1:+1432546 None:intergenic
GTGTGATAAAGTGGAAGCAT+AGG 0.555572 1:+1434769 None:intergenic
TACCATTCGAAACTGGTAGT+TGG 0.555979 1:+1432338 None:intergenic
ATGTCTATGTCTTTAAGAAG+AGG 0.558200 1:-1436847 MsG0180000101.01.T01:CDS
AACTGTAATGTATACCATCA+AGG 0.558598 1:+1434008 None:intergenic
TTGATGGTATACATTACAGT+TGG 0.558896 1:-1434006 MsG0180000101.01.T01:CDS
GTAGCTTGGGGAATCACCGC+AGG 0.559718 1:+1433831 None:intergenic
TCATCGCGACCCTGATATGT+TGG 0.561873 1:-1433775 MsG0180000101.01.T01:CDS
TGGAGCCGCTCACTTCCTAA+AGG 0.562196 1:-1430220 MsG0180000101.01.T01:CDS
AATACTCTCCAACACCAACA+TGG 0.562396 1:+1435487 None:intergenic
CACGGTCAGAAGGGGACTGT+TGG 0.562916 1:-1431118 MsG0180000101.01.T01:CDS
TCTGTTCGAATACCACAGAT+TGG 0.563843 1:-1431160 MsG0180000101.01.T01:CDS
AAAGTTGACTAGAGATGTCA+GGG 0.564452 1:-1435138 MsG0180000101.01.T01:CDS
GTGGATTGACAATAATATCA+GGG 0.564760 1:+1431047 None:intergenic
TACTTCTGTGCGCACTTGGG+CGG 0.565950 1:-1435349 MsG0180000101.01.T01:CDS
TATTCATTGTGGATAAACAA+AGG 0.566213 1:-1432977 MsG0180000101.01.T01:CDS
TTTGAGTAAGCCAATGATGA+CGG 0.566626 1:-1437895 MsG0180000101.01.T01:five_prime_UTR
AGGTCTTCGATTTGGAGAGA+TGG 0.567077 1:-1430265 MsG0180000101.01.T01:CDS
ATTCATTCAGAACACGATGC+AGG 0.568875 1:-1438973 MsG0180000101.01.T01:five_prime_UTR
ATTCGACCAGCAAATGGAAG+AGG 0.569777 1:-1439098 MsG0180000101.01.T01:five_prime_UTR
CCTAATCTGCAGGTATGCTA+AGG 0.570029 1:-1435535 MsG0180000101.01.T01:intron
CTCTTCCTGAGATAGAGGAG+TGG 0.573182 1:+1431518 None:intergenic
ATACACAAGAAGACATGCCC+TGG 0.575210 1:-1431087 MsG0180000101.01.T01:CDS
TCATTATGGAAATAAGAGGC+TGG 0.580811 1:-1435306 MsG0180000101.01.T01:CDS
CGAGTGTATCATGGGGAAGG+TGG 0.580823 1:-1430987 MsG0180000101.01.T01:CDS
CTCTCGGGCTAGTGCAAAAG+GGG 0.581545 1:-1436735 MsG0180000101.01.T01:intron
GAGGGGCGGTCACGTGATGG+AGG 0.582017 1:-1430285 MsG0180000101.01.T01:CDS
GTTCTGAATGAATTCATCAA+AGG 0.582724 1:+1438983 None:intergenic
CGCCAAGTAAAGGACCTGCC+AGG 0.582885 1:+1435282 None:intergenic
AGTAGTAGACACGGTCAGAA+GGG 0.585599 1:-1431127 MsG0180000101.01.T01:CDS
ATGCGCACAAACATAGTGCT+AGG 0.586320 1:+1436761 None:intergenic
GAGGTAGTGATGAGGCTACT+GGG 0.588391 1:+1429586 None:intergenic
GCAAAGCTTTACACAAATGT+GGG 0.589460 1:-1430476 MsG0180000101.01.T01:CDS
GTACTTAAGTCCACTTGTGA+TGG 0.591849 1:+1434968 None:intergenic
CTCACTTGCTACTGGTAATG+GGG 0.592330 1:-1434946 MsG0180000101.01.T01:CDS
ATCCACAGCGTTCACACACG+TGG 0.592592 1:+1430163 None:intergenic
TTCAACCTTTGGTAATAGGT+AGG 0.593041 1:+1430378 None:intergenic
TTGGGCCTACCTATTACCAA+AGG 0.594097 1:-1430383 MsG0180000101.01.T01:CDS
ATATGCGCAGTTCTTTAAGA+CGG 0.594553 1:+1433030 None:intergenic
TCCACAGATATATCATTCAC+CGG 0.598759 1:-1435373 MsG0180000101.01.T01:intron
GACAGCTGCATAATTCACAA+TGG 0.600518 1:-1434187 MsG0180000101.01.T01:CDS
ACAATGGGGAATGATGTGTC+CGG 0.600917 1:-1434171 MsG0180000101.01.T01:CDS
CTTACAAGGCAACCTGCTGA+GGG 0.601495 1:-1430303 MsG0180000101.01.T01:CDS
AAGGAGATGCTTCCCCATGT+TGG 0.602787 1:-1435501 MsG0180000101.01.T01:CDS
ACTGCTTCCTCTCGTGAACG+TGG 0.603906 1:-1429794 MsG0180000101.01.T01:three_prime_UTR
TGACCAATTGTCATTCGAGA+AGG 0.604159 1:+1431016 None:intergenic
GAAAGGGCATGATGGTGAAG+AGG 0.604192 1:-1437771 MsG0180000101.01.T01:CDS
ATGTCCTAACCAACATATCA+GGG 0.604790 1:+1433766 None:intergenic
TTAGAAACATCAACATACAA+AGG 0.606950 1:+1437806 None:intergenic
CCTCAGCGAAATCGGACTGA+TGG 0.607135 1:+1438892 None:intergenic
AGTCAACATGGAATAAAGAC+TGG 0.607208 1:+1429814 None:intergenic
AACACACTGCACCATTCAAG+AGG 0.608526 1:+1435038 None:intergenic
CCAATGATGACGGAATCTGA+TGG 0.608626 1:-1437885 MsG0180000101.01.T01:exon
ACGAGAGGAAGCAGTCAACA+TGG 0.608706 1:+1429802 None:intergenic
GCGGAGGGCTGAAGATGATA+GGG 0.609839 1:-1435330 MsG0180000101.01.T01:CDS
TGATGTTAATACTGAAGTTG+GGG 0.611461 1:-1433066 MsG0180000101.01.T01:CDS
CTGAATTTGTCACCAATCTG+TGG 0.613238 1:+1431148 None:intergenic
TATCGAGTGTATCATGGGGA+AGG 0.618510 1:-1430990 MsG0180000101.01.T01:CDS
TGCCTTGTAAGAATCTGCAC+AGG 0.620516 1:+1430315 None:intergenic
GTGGTCAGGAAATGGTATGA+TGG 0.622245 1:+1432514 None:intergenic
TCTTTCCTTTAGGAAGTGAG+CGG 0.624165 1:+1430215 None:intergenic
GTAGTAGACACGGTCAGAAG+GGG 0.624190 1:-1431126 MsG0180000101.01.T01:CDS
GGGTCGAATTTCGATATCAG+CGG 0.625955 1:+1438935 None:intergenic
GGCCTGTGCAGATTCTTACA+AGG 0.626814 1:-1430317 MsG0180000101.01.T01:CDS
AATTCTCCTATAGGACGTGA+AGG 0.626912 1:-1434734 MsG0180000101.01.T01:intron
ATAACATGAAATGGCCACAA+TGG 0.627397 1:+1432042 None:intergenic
CATACACCCAAAATCAGTGA+TGG 0.628250 1:+1432542 None:intergenic
ATTCGAGAAGGTATAGCATG+TGG 0.628340 1:+1431028 None:intergenic
ATCAACTGTAGGTGTAACCA+AGG 0.629048 1:-1435645 MsG0180000101.01.T01:CDS
TACCAACTACCAGTTTCGAA+TGG 0.633775 1:-1432340 MsG0180000101.01.T01:intron
CCTAACAAGTATGCTTATGT+GGG 0.634295 1:-1436821 MsG0180000101.01.T01:CDS
GTGATGCCTTCTACAGTCCA+GGG 0.636479 1:+1431070 None:intergenic
CAAGGCAACCTGCTGAGGGG+CGG 0.636674 1:-1430299 MsG0180000101.01.T01:CDS
TATGTAGGAAATTTCTCCTG+CGG 0.653804 1:-1433847 MsG0180000101.01.T01:intron
CAGATGCGATATAGGAAGCG+AGG 0.657139 1:+1429567 None:intergenic
CTATCTCAGGAAGAGCAACA+AGG 0.657616 1:-1431510 MsG0180000101.01.T01:CDS
CAAGTGCGCACAGAAGTAGC+CGG 0.657947 1:+1435354 None:intergenic
GATGACAAGATCCATTCTCG+TGG 0.663053 1:-1430345 MsG0180000101.01.T01:CDS
ATAGAGACCGAAAGAAGCCA+CGG 0.663349 1:+1431969 None:intergenic
GTGTGATCCACGTTCACGAG+AGG 0.663833 1:+1429787 None:intergenic
TAGGAAGCGAGGTAGTGATG+AGG 0.663942 1:+1429578 None:intergenic
GACAAATTCAGTAGTAGACA+CGG 0.664921 1:-1431136 MsG0180000101.01.T01:CDS
AAATGTGGGTACCAAATGCG+TGG 0.670341 1:-1430462 MsG0180000101.01.T01:CDS
GAACGTGGATCACACACACA+TGG 0.670875 1:-1429779 MsG0180000101.01.T01:three_prime_UTR
TCACTTGCTACTGGTAATGG+GGG 0.671035 1:-1434945 MsG0180000101.01.T01:CDS
TGTACAATGGTCATACAGGA+AGG 0.673197 1:-1430428 MsG0180000101.01.T01:CDS
TGGATTGACAATAATATCAG+GGG 0.673711 1:+1431048 None:intergenic
TTTGGTAATAGGTAGGCCCA+AGG 0.674216 1:+1430385 None:intergenic
AATGGAAGAGGAAGACGATG+AGG 0.677093 1:-1439086 MsG0180000101.01.T01:five_prime_UTR
CCATCAGTCCGATTTCGCTG+AGG 0.678918 1:-1438892 MsG0180000101.01.T01:intron
GCAGACTGATACGTATTACG+AGG 0.679371 1:+1432393 None:intergenic
CAGACTGATACGTATTACGA+GGG 0.679597 1:+1432394 None:intergenic
TGTGCCATAGAATGCCATTG+TGG 0.679926 1:-1432056 MsG0180000101.01.T01:intron
AGATCCATTCTCGTGGACGA+GGG 0.680250 1:-1430338 MsG0180000101.01.T01:CDS
TACTCTCCAACACCAACATG+GGG 0.682957 1:+1435489 None:intergenic
GGGCACAAGAGTGTCTGGTG+AGG 0.687347 1:-1431559 MsG0180000101.01.T01:CDS
CGCACAAACATAGTGCTAGG+TGG 0.691615 1:+1436764 None:intergenic
GCAGTGTGTTGATAATGGGA+AGG 0.696609 1:-1435025 MsG0180000101.01.T01:CDS
AGCTTATCGAGTGTATCATG+GGG 0.704452 1:-1430994 MsG0180000101.01.T01:CDS
TGTCCGGCAGAAACACCAGA+AGG 0.711936 1:-1434155 MsG0180000101.01.T01:CDS
AACCAATCATCAATAGACCG+TGG 0.713532 1:-1431986 MsG0180000101.01.T01:CDS
TTACAAGGCAACCTGCTGAG+GGG 0.720916 1:-1430302 MsG0180000101.01.T01:CDS
CAGCTGCATAATTCACAATG+GGG 0.732440 1:-1434185 MsG0180000101.01.T01:CDS
AGACTGATACGTATTACGAG+GGG 0.743924 1:+1432395 None:intergenic
GTCCACGTGTGTGAACGCTG+TGG 0.744978 1:-1430165 MsG0180000101.01.T01:CDS
AAGTTGACTAGAGATGTCAG+GGG 0.803386 1:-1435137 MsG0180000101.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATCAATATAATAACAAA+AGG + Chr1:1436466-1436485 None:intergenic 10.0%
!! TTAAAATAGAATGTATTTAT+TGG - Chr1:1435067-1435086 MsG0180000101.01.T01:CDS 10.0%
!!! ATTATTAGATCTTATTTAAT+GGG - Chr1:1437202-1437221 MsG0180000101.01.T01:intron 10.0%
!!! TAAAACCTATTTTATTATTA+CGG - Chr1:1434152-1434171 MsG0180000101.01.T01:CDS 10.0%
!!! TATTATTAGATCTTATTTAA+TGG - Chr1:1437201-1437220 MsG0180000101.01.T01:intron 10.0%
!! AACTATTATTACAAGTTAAA+TGG - Chr1:1435255-1435274 MsG0180000101.01.T01:CDS 15.0%
!! AATAACCGTAATAATAAAAT+AGG + Chr1:1434160-1434179 None:intergenic 15.0%
!! AGTTACAGATTATAAAAAAA+GGG + Chr1:1430564-1430583 None:intergenic 15.0%
!! TAAATAATTTCAAACAATGA+TGG + Chr1:1435423-1435442 None:intergenic 15.0%
!! TAGTTACAGATTATAAAAAA+AGG + Chr1:1430565-1430584 None:intergenic 15.0%
!! TATTGTTCATTGTATTTATA+CGG + Chr1:1439152-1439171 None:intergenic 15.0%
!!! AACAATTATTACTTTTATGA+AGG + Chr1:1434658-1434677 None:intergenic 15.0%
!!! TAATGAGTTAATAGTTTTTT+TGG - Chr1:1439216-1439235 MsG0180000101.01.T01:five_prime_UTR 15.0%
!!! TATCATATTACATTTTTAAG+AGG - Chr1:1435394-1435413 MsG0180000101.01.T01:intron 15.0%
!!! TTAAGTAACTTTGATTTTAT+TGG + Chr1:1434015-1434034 None:intergenic 15.0%
!!! TTATTAGATCTTATTTAATG+GGG - Chr1:1437203-1437222 MsG0180000101.01.T01:intron 15.0%
!!! TTGTTATTATTCTACTTATT+TGG - Chr1:1433339-1433358 MsG0180000101.01.T01:intron 15.0%
!!! TTTTAAGTTATTTTATGATG+TGG - Chr1:1431473-1431492 MsG0180000101.01.T01:CDS 15.0%
!!! TTTTTATAATCTGTAACTAA+CGG - Chr1:1430566-1430585 MsG0180000101.01.T01:intron 15.0%
!! AAAAATCCTTGACATATAAA+TGG + Chr1:1438921-1438940 None:intergenic 20.0%
!! AAAACCATTTATTTACAAAC+CGG - Chr1:1433985-1434004 MsG0180000101.01.T01:CDS 20.0%
!! AACAACATACAAAATACAAT+AGG + Chr1:1437751-1437770 None:intergenic 20.0%
!! AATACAATGAACAATACATA+TGG - Chr1:1439156-1439175 MsG0180000101.01.T01:five_prime_UTR 20.0%
!! AGAATTTAAATTAGTACATG+TGG + Chr1:1432648-1432667 None:intergenic 20.0%
!! AGTATTACATTACTAGAAAT+TGG - Chr1:1434068-1434087 MsG0180000101.01.T01:intron 20.0%
!! ATTGCAATGTAAAAATAAAG+TGG + Chr1:1432673-1432692 None:intergenic 20.0%
!! CATTATACAAGTAGTAATAT+AGG + Chr1:1434466-1434485 None:intergenic 20.0%
!! GATACTTCAAAAAAATATAG+CGG - Chr1:1429880-1429899 MsG0180000101.01.T01:CDS 20.0%
!! GTAGTTTAGTATATAGTATT+TGG - Chr1:1431156-1431175 MsG0180000101.01.T01:CDS 20.0%
!! TAAACTACAACTATAACAAT+TGG + Chr1:1431144-1431163 None:intergenic 20.0%
!! TAACAACAAAACCATTATTT+AGG + Chr1:1431540-1431559 None:intergenic 20.0%
!! TACCTATTTAGAAAATATCA+TGG - Chr1:1437982-1438001 MsG0180000101.01.T01:intron 20.0%
!! TATTATTTATACTCGAATGA+AGG - Chr1:1432327-1432346 MsG0180000101.01.T01:intron 20.0%
!! TCAATGAAATAATCACTTAT+AGG + Chr1:1430386-1430405 None:intergenic 20.0%
!! TCTATTAGTATTCTATATTC+TGG - Chr1:1435131-1435150 MsG0180000101.01.T01:CDS 20.0%
!! TGATTATGAATGTATTTAAC+AGG - Chr1:1435934-1435953 MsG0180000101.01.T01:intron 20.0%
!! TGCATTTATGTACTAATAAA+GGG + Chr1:1435884-1435903 None:intergenic 20.0%
!! TTCAATTAGATGATTAAATC+TGG - Chr1:1429733-1429752 MsG0180000101.01.T01:three_prime_UTR 20.0%
!! TTGCAATGTAAAAATAAAGT+GGG + Chr1:1432672-1432691 None:intergenic 20.0%
!! TTGCATTTATGTACTAATAA+AGG + Chr1:1435885-1435904 None:intergenic 20.0%
!! TTTACAATATCAATTCAATC+TGG - Chr1:1434180-1434199 MsG0180000101.01.T01:CDS 20.0%
!!! AAAATATAGCGGTTAATTTT+TGG - Chr1:1429891-1429910 MsG0180000101.01.T01:CDS 20.0%
!!! AATTTCTAGTAATGTAATAC+TGG + Chr1:1434069-1434088 None:intergenic 20.0%
!!! ACTAAAAAAGCATACTATTT+GGG - Chr1:1433108-1433127 MsG0180000101.01.T01:intron 20.0%
!!! AGTGAATTTTCAATTAATTC+GGG + Chr1:1436652-1436671 None:intergenic 20.0%
!!! ATAATGGTTTTGTTGTTATT+AGG - Chr1:1431542-1431561 MsG0180000101.01.T01:CDS 20.0%
!!! ATGATAATTTTCTACCTTTT+TGG + Chr1:1435298-1435317 None:intergenic 20.0%
!!! CAAAAGGATTTTAATAAAGA+AGG + Chr1:1436450-1436469 None:intergenic 20.0%
!!! CAGTGAATTTTCAATTAATT+CGG + Chr1:1436653-1436672 None:intergenic 20.0%
!!! CCTTATTAAGATAATCTTTT+GGG - Chr1:1435200-1435219 MsG0180000101.01.T01:intron 20.0%
!!! TACCATGATATTTTCTAAAT+AGG + Chr1:1437987-1438006 None:intergenic 20.0%
!!! TATTAACTCATTATTTTGCA+TGG + Chr1:1439209-1439228 None:intergenic 20.0%
!!! TATTATTTTTTGAGCAATGT+GGG + Chr1:1434045-1434064 None:intergenic 20.0%
!!! TTACATATTTCCTATTTTGT+AGG - Chr1:1437332-1437351 MsG0180000101.01.T01:intron 20.0%
!!! TTATTATTTTTTGAGCAATG+TGG + Chr1:1434046-1434065 None:intergenic 20.0%
!!! TTCTTTAGAAAATCATTTTG+TGG - Chr1:1430456-1430475 MsG0180000101.01.T01:CDS 20.0%
!!! TTGTACTAAAAAAGTATATC+CGG + Chr1:1439129-1439148 None:intergenic 20.0%
!!! TTTCAATTTTCAATATAACG+TGG - Chr1:1429770-1429789 MsG0180000101.01.T01:three_prime_UTR 20.0%
!!! TTTTATAATCTGTAACTAAC+GGG - Chr1:1430567-1430586 MsG0180000101.01.T01:intron 20.0%
!!! TTTTGAAAATCTGTAACTAA+AGG - Chr1:1430352-1430371 MsG0180000101.01.T01:CDS 20.0%
!!! TTTTTAAGTGATTTTCATTC+TGG + Chr1:1429966-1429985 None:intergenic 20.0%
!!! TTTTTAGGGTTTGTTTATTA+CGG - Chr1:1429837-1429856 MsG0180000101.01.T01:three_prime_UTR 20.0%
! AAAATCAAAACCGTTCTTTA+GGG - Chr1:1432784-1432803 MsG0180000101.01.T01:intron 25.0%
! AACTGAAAAAGACTTCTTAT+AGG + Chr1:1431209-1431228 None:intergenic 25.0%
! AAGATACTAAGTGTTATGTT+AGG - Chr1:1430011-1430030 MsG0180000101.01.T01:intron 25.0%
! AATAGCACATGTTAAACTTT+GGG + Chr1:1437864-1437883 None:intergenic 25.0%
! AATTCGAAGTTCAAATTATG+CGG + Chr1:1429413-1429432 None:intergenic 25.0%
! AATTTAAACACAAGCTAGAA+AGG + Chr1:1438033-1438052 None:intergenic 25.0%
! ACGATTTATAAGATAAGCTT+CGG - Chr1:1430640-1430659 MsG0180000101.01.T01:intron 25.0%
! ACTAGAAATTGGTTATAACT+AGG - Chr1:1434079-1434098 MsG0180000101.01.T01:intron 25.0%
! AGTAAACTGAAAATGACAAA+AGG + Chr1:1431271-1431290 None:intergenic 25.0%
! ATAAAAGACCAAAAGAAGAA+AGG - Chr1:1438701-1438720 MsG0180000101.01.T01:intron 25.0%
! ATAACCAGAATAACATGAAA+TGG + Chr1:1436537-1436556 None:intergenic 25.0%
! ATAAGCTTAAGCTTCTATTT+AGG - Chr1:1431244-1431263 MsG0180000101.01.T01:intron 25.0%
! ATAATATAAAACATACGCCA+AGG + Chr1:1436349-1436368 None:intergenic 25.0%
! ATACTTGAAATTCAAGTAAC+AGG + Chr1:1433154-1433173 None:intergenic 25.0%
! ATATTGATCGAAAAATTAGC+TGG - Chr1:1439044-1439063 MsG0180000101.01.T01:five_prime_UTR 25.0%
! ATTATGAATAAATTGGCACT+AGG - Chr1:1433935-1433954 MsG0180000101.01.T01:intron 25.0%
! ATTCCTATCATTATTGTGTT+CGG - Chr1:1432026-1432045 MsG0180000101.01.T01:CDS 25.0%
! ATTTGTGATACAAAATCAAC+AGG - Chr1:1432149-1432168 MsG0180000101.01.T01:intron 25.0%
! CAAAATCATATGACACAATA+TGG + Chr1:1432726-1432745 None:intergenic 25.0%
! CAATTTATCACTATGAAACA+GGG - Chr1:1436988-1437007 MsG0180000101.01.T01:intron 25.0%
! CAGTACTATAATTCTAGATT+TGG - Chr1:1435847-1435866 MsG0180000101.01.T01:intron 25.0%
! CCCAAAAGATTATCTTAATA+AGG + Chr1:1435203-1435222 None:intergenic 25.0%
! CTAGAAATTGGTTATAACTA+GGG - Chr1:1434080-1434099 MsG0180000101.01.T01:intron 25.0%
! CTTGATTATATTGGAAAAAG+AGG - Chr1:1432899-1432918 MsG0180000101.01.T01:intron 25.0%
! GGATTGTAAAATAAGTGATT+TGG - Chr1:1429858-1429877 MsG0180000101.01.T01:exon 25.0%
! GTTACTGAATAAATGTGTTA+GGG - Chr1:1431360-1431379 MsG0180000101.01.T01:intron 25.0%
! TAAGCATGTATCTTAGAATT+CGG + Chr1:1431095-1431114 None:intergenic 25.0%
! TAGAAATTGGTTATAACTAG+GGG - Chr1:1434081-1434100 MsG0180000101.01.T01:intron 25.0%
! TATGATAAATTGGATGATGA+TGG - Chr1:1436886-1436905 MsG0180000101.01.T01:intron 25.0%
! TATTCATTGTGGATAAACAA+AGG - Chr1:1435590-1435609 MsG0180000101.01.T01:intron 25.0%
! TATTGATCGAAAAATTAGCT+GGG - Chr1:1439045-1439064 MsG0180000101.01.T01:five_prime_UTR 25.0%
! TGATGTGATGTAATATGATT+TGG - Chr1:1430605-1430624 MsG0180000101.01.T01:intron 25.0%
! TGTTACTGAATAAATGTGTT+AGG - Chr1:1431359-1431378 MsG0180000101.01.T01:intron 25.0%
! TGTTTATCCACAATGAATAA+AGG + Chr1:1435589-1435608 None:intergenic 25.0%
! TTAGAAACATCAACATACAA+AGG + Chr1:1430764-1430783 None:intergenic 25.0%
! TTATGAATAAATTGGCACTA+GGG - Chr1:1433936-1433955 MsG0180000101.01.T01:intron 25.0%
! TTATTTATCAATTTCACTCC+AGG - Chr1:1432871-1432890 MsG0180000101.01.T01:intron 25.0%
! TTCTGCTTATTTGAAGAAAA+AGG - Chr1:1429538-1429557 MsG0180000101.01.T01:three_prime_UTR 25.0%
! TTCTTATAAAAGAACGACAT+GGG - Chr1:1434996-1435015 MsG0180000101.01.T01:CDS 25.0%
! TTGAATCATCTAAGCTTATA+TGG + Chr1:1432766-1432785 None:intergenic 25.0%
! TTGATGTTAATACTGAAGTT+GGG - Chr1:1435500-1435519 MsG0180000101.01.T01:CDS 25.0%
!! AGAGAGCTTTTAAACTTATT+AGG - Chr1:1432512-1432531 MsG0180000101.01.T01:CDS 25.0%
!! ATCAGGTAAATATGGTATTT+TGG - Chr1:1436077-1436096 MsG0180000101.01.T01:intron 25.0%
!! ATGGTAGAATTTTTGCTTTA+TGG - Chr1:1438001-1438020 MsG0180000101.01.T01:intron 25.0%
!! ATGTCGTTCTTTTATAAGAA+GGG + Chr1:1434996-1435015 None:intergenic 25.0%
!! GACTAAAAAAGCATACTATT+TGG - Chr1:1433107-1433126 MsG0180000101.01.T01:intron 25.0%
!! GAGAGCTTTTAAACTTATTA+GGG - Chr1:1432513-1432532 MsG0180000101.01.T01:CDS 25.0%
!! GCTACAAAAATTTTCGTAAA+TGG - Chr1:1434754-1434773 MsG0180000101.01.T01:CDS 25.0%
!! GCTTTTATAAAAATGAGTCT+AGG + Chr1:1435371-1435390 None:intergenic 25.0%
!! GGTTTGTAAATAAATGGTTT+TGG + Chr1:1433986-1434005 None:intergenic 25.0%
!! GTGAATTTTCAATTAATTCG+GGG + Chr1:1436651-1436670 None:intergenic 25.0%
!! GTTTTGCATTTAAAAAACGT+CGG - Chr1:1437838-1437857 MsG0180000101.01.T01:CDS 25.0%
!! TAATTGTTTCTTTCTGTGTA+TGG - Chr1:1434670-1434689 MsG0180000101.01.T01:intron 25.0%
!! TACGAAAATTTTTGTAGCTT+GGG + Chr1:1434752-1434771 None:intergenic 25.0%
!! TCAGGTAAATATGGTATTTT+GGG - Chr1:1436078-1436097 MsG0180000101.01.T01:intron 25.0%
!! TCTTTCTATTTCTTAATTCC+TGG - Chr1:1433377-1433396 MsG0180000101.01.T01:intron 25.0%
!! TGAACAGTCTGAAATATATT+TGG + Chr1:1432274-1432293 None:intergenic 25.0%
!! TGAAGTATCAAGAAAATTGT+GGG + Chr1:1432827-1432846 None:intergenic 25.0%
!! TTACGAAAATTTTTGTAGCT+TGG + Chr1:1434753-1434772 None:intergenic 25.0%
!! TTGAAGTATCAAGAAAATTG+TGG + Chr1:1432828-1432847 None:intergenic 25.0%
!! TTTTACTATTTCAGGAAAGT+TGG - Chr1:1434348-1434367 MsG0180000101.01.T01:intron 25.0%
!!! AATTTTGACCCATTTAAAAG+TGG + Chr1:1430039-1430058 None:intergenic 25.0%
!!! ACTTATTTGGTCTTGTTATT+TGG - Chr1:1433352-1433371 MsG0180000101.01.T01:intron 25.0%
!!! AGGAGGTATTTCATTATTAA+TGG - Chr1:1431653-1431672 MsG0180000101.01.T01:intron 25.0%
!!! ATAAAAAGTGTTGTTTTGCA+GGG - Chr1:1436847-1436866 MsG0180000101.01.T01:CDS 25.0%
!!! ATTATTTTTTGAGCAATGTG+GGG + Chr1:1434044-1434063 None:intergenic 25.0%
!!! ATTCTAAGATACATGCTTAA+AGG - Chr1:1431096-1431115 MsG0180000101.01.T01:CDS 25.0%
!!! CTTTGATTTTATTGGTAAAC+CGG + Chr1:1434007-1434026 None:intergenic 25.0%
!!! GCCTTATTAAGATAATCTTT+TGG - Chr1:1435199-1435218 MsG0180000101.01.T01:intron 25.0%
!!! TAAACCGGTTTGTAAATAAA+TGG + Chr1:1433992-1434011 None:intergenic 25.0%
!!! TAAGTTATTTTATGATGTGG+TGG - Chr1:1431476-1431495 MsG0180000101.01.T01:CDS 25.0%
!!! TAATAGTTTTTTTGGTCGAA+TGG - Chr1:1439224-1439243 MsG0180000101.01.T01:five_prime_UTR 25.0%
!!! TACAATGAGAAGTGTTTTTA+GGG - Chr1:1429823-1429842 MsG0180000101.01.T01:three_prime_UTR 25.0%
!!! TATAAAAAGTGTTGTTTTGC+AGG - Chr1:1436846-1436865 MsG0180000101.01.T01:CDS 25.0%
!!! TGTCTAAGTTGTATTTTTGT+TGG - Chr1:1434320-1434339 MsG0180000101.01.T01:intron 25.0%
!!! TTACAATGAGAAGTGTTTTT+AGG - Chr1:1429822-1429841 MsG0180000101.01.T01:three_prime_UTR 25.0%
!!! TTCTAAGATACATGCTTAAA+GGG - Chr1:1431097-1431116 MsG0180000101.01.T01:CDS 25.0%
!!! TTTTTTGCTTACAGTCAAAA+TGG - Chr1:1432193-1432212 MsG0180000101.01.T01:intron 25.0%
AAAACAATTTCCTTGTGTAC+TGG + Chr1:1437823-1437842 None:intergenic 30.0%
AAACACCACAAACAACAAAA+AGG + Chr1:1431316-1431335 None:intergenic 30.0%
AAATACTATTGTGTGCCTTA+AGG - Chr1:1435029-1435048 MsG0180000101.01.T01:CDS 30.0%
AACAGCTCTTATAAGGTTAT+AGG - Chr1:1432419-1432438 MsG0180000101.01.T01:intron 30.0%
AACTGTAATGTATACCATCA+AGG + Chr1:1434562-1434581 None:intergenic 30.0%
AACTTTCAGACATGTTATTC+AGG + Chr1:1436948-1436967 None:intergenic 30.0%
AATACTAGAATTGAGAGGAA+GGG + Chr1:1430867-1430886 None:intergenic 30.0%
AATCTCTATCTTCTTACCTT+TGG - Chr1:1436136-1436155 MsG0180000101.01.T01:intron 30.0%
AATTCACTCTACTTGAAGTT+AGG - Chr1:1430110-1430129 MsG0180000101.01.T01:CDS 30.0%
ACAGAGATGAAGAGAAAAAA+TGG - Chr1:1436724-1436743 MsG0180000101.01.T01:intron 30.0%
ACATATATGCTATGACTTTG+CGG - Chr1:1432084-1432103 MsG0180000101.01.T01:intron 30.0%
ACGTTATTGGGCTATTATTT+AGG - Chr1:1434512-1434531 MsG0180000101.01.T01:intron 30.0%
ACTATATCAGAATTCAGAGA+AGG - Chr1:1431596-1431615 MsG0180000101.01.T01:intron 30.0%
ACTTCAATGTCTTCTGTATA+TGG - Chr1:1432841-1432860 MsG0180000101.01.T01:intron 30.0%
AGTCATAGCATATATGTTCA+AGG + Chr1:1432081-1432100 None:intergenic 30.0%
AGTGTAGTAGATACAATCAT+TGG - Chr1:1434942-1434961 MsG0180000101.01.T01:CDS 30.0%
ATAATGAACTCATCTTTCTC+TGG - Chr1:1434480-1434499 MsG0180000101.01.T01:intron 30.0%
ATACCAAAATCCTGAATTTC+TGG - Chr1:1437285-1437304 MsG0180000101.01.T01:intron 30.0%
ATACCATATTTACCTGATTG+TGG + Chr1:1436075-1436094 None:intergenic 30.0%
ATAGCAAATCAACAACATGT+AGG + Chr1:1436817-1436836 None:intergenic 30.0%
ATAGCTGCATCACAAATTAT+AGG + Chr1:1433405-1433424 None:intergenic 30.0%
ATGAACCAAACCGAATATAA+CGG + Chr1:1434213-1434232 None:intergenic 30.0%
ATTAGGTTCCTATTATGCTT+CGG - Chr1:1431559-1431578 MsG0180000101.01.T01:CDS 30.0%
ATTTGGAGAGAATTCTTGTA+TGG - Chr1:1435229-1435248 MsG0180000101.01.T01:intron 30.0%
CAAAATCAAAACCGTTCTTT+AGG - Chr1:1432783-1432802 MsG0180000101.01.T01:intron 30.0%
CAAAATTTACAATTCCAGCA+GGG + Chr1:1436426-1436445 None:intergenic 30.0%
CAGAGATGAAGAGAAAAAAT+GGG - Chr1:1436725-1436744 MsG0180000101.01.T01:intron 30.0%
CATACAAAATACAATAGGCA+CGG + Chr1:1437746-1437765 None:intergenic 30.0%
CGAATTTGAACAAATGATGA+TGG - Chr1:1429427-1429446 MsG0180000101.01.T01:three_prime_UTR 30.0%
CTGTCAAAATATATGCTTAC+AGG + Chr1:1436922-1436941 None:intergenic 30.0%
CTTAAAGACATAGACATGAT+TGG + Chr1:1431717-1431736 None:intergenic 30.0%
CTTACAGTAACATCTGTAAA+AGG + Chr1:1437637-1437656 None:intergenic 30.0%
CTTCTTATAAAAGAACGACA+TGG - Chr1:1434995-1435014 MsG0180000101.01.T01:CDS 30.0%
GAATAGCACATGTTAAACTT+TGG + Chr1:1437865-1437884 None:intergenic 30.0%
GACATTCCATTTATATGTCA+AGG - Chr1:1438912-1438931 MsG0180000101.01.T01:five_prime_UTR 30.0%
GATATATTCTATAAAGCCCT+TGG + Chr1:1435780-1435799 None:intergenic 30.0%
GCAATTTATCACTATGAAAC+AGG - Chr1:1436987-1437006 MsG0180000101.01.T01:intron 30.0%
GCATGGTTCTTATGATAAAT+TGG - Chr1:1436876-1436895 MsG0180000101.01.T01:intron 30.0%
GGTTTATTCTTGAACTAGAA+AGG + Chr1:1438944-1438963 None:intergenic 30.0%
GTAGTCTATATTTCTTAGCA+AGG - Chr1:1435177-1435196 MsG0180000101.01.T01:intron 30.0%
GTGGTGAAATATAATTGGAT+CGG - Chr1:1431495-1431514 MsG0180000101.01.T01:CDS 30.0%
GTTGATGTTAATACTGAAGT+TGG - Chr1:1435499-1435518 MsG0180000101.01.T01:CDS 30.0%
TACACTAAAAACTGCTTCAA+AGG - Chr1:1430303-1430322 MsG0180000101.01.T01:CDS 30.0%
TACAGATTCTGATTTCATTG+CGG - Chr1:1430888-1430907 MsG0180000101.01.T01:intron 30.0%
TAGAAGCTTAAGCTTATCAT+TGG + Chr1:1431241-1431260 None:intergenic 30.0%
TATGAATAAATTGGCACTAG+GGG - Chr1:1433937-1433956 MsG0180000101.01.T01:intron 30.0%
TCAAAATATATGCTTACAGG+TGG + Chr1:1436919-1436938 None:intergenic 30.0%
TCAAAATTTACAATTCCAGC+AGG + Chr1:1436427-1436446 None:intergenic 30.0%
TCATCTTTCTCTGGTATTTA+TGG - Chr1:1434489-1434508 MsG0180000101.01.T01:intron 30.0%
TGATGTTAATACTGAAGTTG+GGG - Chr1:1435501-1435520 MsG0180000101.01.T01:CDS 30.0%
TGCAATATTTCCCTAAAGAA+CGG + Chr1:1432797-1432816 None:intergenic 30.0%
TGGATTGACAATAATATCAG+GGG + Chr1:1437522-1437541 None:intergenic 30.0%
TGGTATTTATGGACGTTATT+GGG - Chr1:1434500-1434519 MsG0180000101.01.T01:intron 30.0%
TGGTTCAAAACCGTTATATT+CGG - Chr1:1434200-1434219 MsG0180000101.01.T01:CDS 30.0%
TGTAACAGTTGCTTCATAAT+GGG + Chr1:1433005-1433024 None:intergenic 30.0%
TGTAGAATACTAGAATTGAG+AGG + Chr1:1430872-1430891 None:intergenic 30.0%
TGTGGTGACAATAATTGATT+TGG + Chr1:1430274-1430293 None:intergenic 30.0%
TTAGGGAAATATTGCAACTT+TGG - Chr1:1432801-1432820 MsG0180000101.01.T01:intron 30.0%
TTCCTATCATTATTGTGTTC+GGG - Chr1:1432027-1432046 MsG0180000101.01.T01:CDS 30.0%
TTTACCCTTCCACTTAAATA+GGG - Chr1:1437771-1437790 MsG0180000101.01.T01:CDS 30.0%
! AAATGGGTCAAAATTGATTC+TGG - Chr1:1430044-1430063 MsG0180000101.01.T01:intron 30.0%
! AAATTTTCGTAAATGGTTGC+TGG - Chr1:1434761-1434780 MsG0180000101.01.T01:CDS 30.0%
! AACCATTATTTAGGTTACTC+AGG + Chr1:1431531-1431550 None:intergenic 30.0%
! AAGGTAAAGTGATTTGTGTT+TGG + Chr1:1430208-1430227 None:intergenic 30.0%
! ACGAAAATTTTTGTAGCTTG+GGG + Chr1:1434751-1434770 None:intergenic 30.0%
! ACGAGATCTTTTAACCAAAA+AGG - Chr1:1435281-1435300 MsG0180000101.01.T01:CDS 30.0%
! ACTCTTGTCAAAGAAGATTT+TGG - Chr1:1436749-1436768 MsG0180000101.01.T01:CDS 30.0%
! AGATTCTTAGTTTCTCGTTT+TGG - Chr1:1438569-1438588 MsG0180000101.01.T01:intron 30.0%
! AGTGAGTTGAACTATCAATT+TGG + Chr1:1430171-1430190 None:intergenic 30.0%
! ATACATGCTTAAAGGGTTTT+TGG - Chr1:1431104-1431123 MsG0180000101.01.T01:CDS 30.0%
! ATGTCTATGTCTTTAAGAAG+AGG - Chr1:1431720-1431739 MsG0180000101.01.T01:intron 30.0%
! ATGTGGTGGTGAAATATAAT+TGG - Chr1:1431490-1431509 MsG0180000101.01.T01:CDS 30.0%
! ATGTTATTCTGACTTGAAGA+AGG + Chr1:1431386-1431405 None:intergenic 30.0%
! ATTGTTTTCTACTGTAATCC+AGG - Chr1:1438056-1438075 MsG0180000101.01.T01:intron 30.0%
! CATGTCGTTCTTTTATAAGA+AGG + Chr1:1434997-1435016 None:intergenic 30.0%
! CTTTTGCACAAGTACTTATA+GGG + Chr1:1432591-1432610 None:intergenic 30.0%
! GAAATGACATTCCTTTTGTT+GGG - Chr1:1438885-1438904 MsG0180000101.01.T01:intron 30.0%
! GATTTCACCAAAGTTTTCAT+TGG - Chr1:1430833-1430852 MsG0180000101.01.T01:intron 30.0%
! GTATGTTGATGTTTCTAAGA+GGG - Chr1:1430766-1430785 MsG0180000101.01.T01:intron 30.0%
! GTGAGTTGAACTATCAATTT+GGG + Chr1:1430170-1430189 None:intergenic 30.0%
! GTGGATTGACAATAATATCA+GGG + Chr1:1437523-1437542 None:intergenic 30.0%
! GTGGTGACAATAATTGATTT+GGG + Chr1:1430273-1430292 None:intergenic 30.0%
! GTTCTGAATGAATTCATCAA+AGG + Chr1:1429587-1429606 None:intergenic 30.0%
! TATGCATTTTATTCCTACCA+GGG - Chr1:1431954-1431973 MsG0180000101.01.T01:intron 30.0%
! TCACTTAATTCTCTTTTCCT+TGG + Chr1:1432942-1432961 None:intergenic 30.0%
! TCCATTGATTGTATCAACTA+CGG + Chr1:1434249-1434268 None:intergenic 30.0%
! TCCTACATAGTGGAAAAAAA+AGG + Chr1:1434709-1434728 None:intergenic 30.0%
! TCTGTCTTCTAAAGATGAAA+TGG - Chr1:1433722-1433741 MsG0180000101.01.T01:intron 30.0%
! TCTTCTAAAAACTCCAGAAT+AGG + Chr1:1434600-1434619 None:intergenic 30.0%
! TCTTTTGCACAAGTACTTAT+AGG + Chr1:1432592-1432611 None:intergenic 30.0%
! TGATTTTGTCTTGAGTCTTT+TGG - Chr1:1434866-1434885 MsG0180000101.01.T01:intron 30.0%
! TGGTTCTCTTTTACTATTTC+AGG - Chr1:1434340-1434359 MsG0180000101.01.T01:intron 30.0%
! TGTATGTTGATGTTTCTAAG+AGG - Chr1:1430765-1430784 MsG0180000101.01.T01:intron 30.0%
! TGTGGATTGACAATAATATC+AGG + Chr1:1437524-1437543 None:intergenic 30.0%
! TTATGCATTTTATTCCTACC+AGG - Chr1:1431953-1431972 MsG0180000101.01.T01:intron 30.0%
! TTGATGGTATACATTACAGT+TGG - Chr1:1434561-1434580 MsG0180000101.01.T01:intron 30.0%
! TTTAGTGTATGTTGGTTATG+TGG + Chr1:1430292-1430311 None:intergenic 30.0%
! TTTTACCCTTCCACTTAAAT+AGG - Chr1:1437770-1437789 MsG0180000101.01.T01:CDS 30.0%
!! AAGAATTCTTTTGAGTGTAG+GGG - Chr1:1438450-1438469 MsG0180000101.01.T01:intron 30.0%
!! AATCTTTTGGGTGAGATATT+TGG - Chr1:1435212-1435231 MsG0180000101.01.T01:intron 30.0%
!! ACTTGTTTTTCCATTTCTTC+AGG - Chr1:1435717-1435736 MsG0180000101.01.T01:intron 30.0%
!! AGAAGAATTCTTTTGAGTGT+AGG - Chr1:1438448-1438467 MsG0180000101.01.T01:intron 30.0%
!! AGTACTGACATTAATTGTCA+TGG + Chr1:1435834-1435853 None:intergenic 30.0%
!! AGTGATTTGATTTTCGAAAG+AGG + Chr1:1429311-1429330 None:intergenic 30.0%
!! CATGTTGTTGATTTGCTATT+TGG - Chr1:1436818-1436837 MsG0180000101.01.T01:CDS 30.0%
!! CTCTATTTTTCCGTTCATAT+AGG - Chr1:1436615-1436634 MsG0180000101.01.T01:intron 30.0%
!! GAAGAATTCTTTTGAGTGTA+GGG - Chr1:1438449-1438468 MsG0180000101.01.T01:intron 30.0%
!! GTTAGGTTCCACTTTTAAAT+GGG - Chr1:1430028-1430047 MsG0180000101.01.T01:intron 30.0%
!! TCTGGAGTTTTTAGAAGAAT+GGG - Chr1:1434602-1434621 MsG0180000101.01.T01:intron 30.0%
!! TGAACAAATGATGATGGATT+TGG - Chr1:1429433-1429452 MsG0180000101.01.T01:three_prime_UTR 30.0%
!! TGTTAGGTTCCACTTTTAAA+TGG - Chr1:1430027-1430046 MsG0180000101.01.T01:intron 30.0%
!! TTGTCAAAGAAGATTTTGGT+CGG - Chr1:1436753-1436772 MsG0180000101.01.T01:CDS 30.0%
!! TTTTCATAGTTTAGTGCTGA+TGG - Chr1:1435460-1435479 MsG0180000101.01.T01:CDS 30.0%
!!! AAGCAGTTTTTAGTGTATGT+TGG + Chr1:1430300-1430319 None:intergenic 30.0%
!!! ATGGTGTCTTTGTTTTGTAT+GGG - Chr1:1439175-1439194 MsG0180000101.01.T01:five_prime_UTR 30.0%
!!! TATGGTGTCTTTGTTTTGTA+TGG - Chr1:1439174-1439193 MsG0180000101.01.T01:five_prime_UTR 30.0%
!!! TTCTGGAGTTTTTAGAAGAA+TGG - Chr1:1434601-1434620 MsG0180000101.01.T01:intron 30.0%
AAAATACTCACTTGTCCTTC+TGG + Chr1:1434430-1434449 None:intergenic 35.0%
AAACTTCCTAAACACTACAC+AGG + Chr1:1431022-1431041 None:intergenic 35.0%
AAAGTTGACTAGAGATGTCA+GGG - Chr1:1433429-1433448 MsG0180000101.01.T01:intron 35.0%
AAGAGTAAAGCCAGAAATTC+AGG + Chr1:1437298-1437317 None:intergenic 35.0%
AAGCAAAAAACCATCACAAG+TGG - Chr1:1433589-1433608 MsG0180000101.01.T01:intron 35.0%
AATACGTATCAGTCTGCTAT+GGG - Chr1:1436180-1436199 MsG0180000101.01.T01:intron 35.0%
AATGTCCTAACCAACATATC+AGG + Chr1:1434805-1434824 None:intergenic 35.0%
ACAATGTACAATGGTCATAC+AGG - Chr1:1438135-1438154 MsG0180000101.01.T01:intron 35.0%
ACAGCTGCATAATTCACAAT+GGG - Chr1:1434381-1434400 MsG0180000101.01.T01:intron 35.0%
ACATTCATTCTTTGCAGCAA+AGG - Chr1:1435632-1435651 MsG0180000101.01.T01:CDS 35.0%
ACCTAACAAGTATGCTTATG+TGG - Chr1:1431745-1431764 MsG0180000101.01.T01:intron 35.0%
ACCTCTTTAGTAAGCATTCT+TGG + Chr1:1438674-1438693 None:intergenic 35.0%
AGAATATATCGACACAGAAG+AGG - Chr1:1435790-1435809 MsG0180000101.01.T01:intron 35.0%
AGCAAACAGACCTATATGAA+CGG + Chr1:1436628-1436647 None:intergenic 35.0%
AGCAAAGCTTTACACAAATG+TGG - Chr1:1438090-1438109 MsG0180000101.01.T01:intron 35.0%
AGCTAGAAACTAATCCAAAC+TGG + Chr1:1432354-1432373 None:intergenic 35.0%
AGGAGAAATTTCCTACATAG+TGG + Chr1:1434719-1434738 None:intergenic 35.0%
AGTCAACATGGAATAAAGAC+TGG + Chr1:1438756-1438775 None:intergenic 35.0%
ATAACATGAAATGGCCACAA+TGG + Chr1:1436528-1436547 None:intergenic 35.0%
ATAACCTTCTACCTCTTGAA+TGG - Chr1:1433518-1433537 MsG0180000101.01.T01:intron 35.0%
ATACCTTCTCGAATGACAAT+TGG - Chr1:1437548-1437567 MsG0180000101.01.T01:intron 35.0%
ATACTAGAATTGAGAGGAAG+GGG + Chr1:1430866-1430885 None:intergenic 35.0%
ATAGGCGTTTGTGAAGTTAA+AGG - Chr1:1432437-1432456 MsG0180000101.01.T01:intron 35.0%
ATATTATCCTCAAAAGCCAC+TGG - Chr1:1436362-1436381 MsG0180000101.01.T01:intron 35.0%
ATATTTACCTGATTGTGGTC+AGG + Chr1:1436070-1436089 None:intergenic 35.0%
ATGTCCTAACCAACATATCA+GGG + Chr1:1434804-1434823 None:intergenic 35.0%
ATGTTCAAGGATATCCTTGT+CGG + Chr1:1432068-1432087 None:intergenic 35.0%
ATTTCAGACTGTTCAGAAGA+TGG - Chr1:1432279-1432298 MsG0180000101.01.T01:intron 35.0%
CAAAACCGTTATATTCGGTT+TGG - Chr1:1434205-1434224 MsG0180000101.01.T01:CDS 35.0%
CAATATAATCAAGTGCAACC+TGG + Chr1:1432892-1432911 None:intergenic 35.0%
CAGGTTGCACTTGATTATAT+TGG - Chr1:1432890-1432909 MsG0180000101.01.T01:intron 35.0%
CATCACAAATTATAGGAACC+AGG + Chr1:1433398-1433417 None:intergenic 35.0%
CATTATTAATGGCAGTGAGA+AGG - Chr1:1431664-1431683 MsG0180000101.01.T01:intron 35.0%
CATTCATTCTTTGCAGCAAA+GGG - Chr1:1435633-1435652 MsG0180000101.01.T01:CDS 35.0%
CCTAACAAGTATGCTTATGT+GGG - Chr1:1431746-1431765 MsG0180000101.01.T01:intron 35.0%
CGAAGATTGAATTCTCCTAT+AGG - Chr1:1433824-1433843 MsG0180000101.01.T01:CDS 35.0%
CTAAGAGGGTCATTAAGAAA+GGG - Chr1:1430780-1430799 MsG0180000101.01.T01:intron 35.0%
CTACTATTCCAGTTTCACTA+TGG + Chr1:1437128-1437147 None:intergenic 35.0%
CTGCGCATATATACAGATTA+TGG - Chr1:1435550-1435569 MsG0180000101.01.T01:intron 35.0%
CTGGTATTTATGGACGTTAT+TGG - Chr1:1434499-1434518 MsG0180000101.01.T01:intron 35.0%
GAAATACCTCCTTGATCATA+CGG + Chr1:1431645-1431664 None:intergenic 35.0%
GAACAAAACTGACATTGTTC+AGG - Chr1:1438479-1438498 MsG0180000101.01.T01:intron 35.0%
GAAGATGATAGGGATCATTA+TGG - Chr1:1433247-1433266 MsG0180000101.01.T01:intron 35.0%
GAATACTAGAATTGAGAGGA+AGG + Chr1:1430868-1430887 None:intergenic 35.0%
GACAAATTCAGTAGTAGACA+CGG - Chr1:1437431-1437450 MsG0180000101.01.T01:intron 35.0%
GATCAAACAGTCTTTCCTTT+AGG + Chr1:1438365-1438384 None:intergenic 35.0%
GCAAAGCTTTACACAAATGT+GGG - Chr1:1438091-1438110 MsG0180000101.01.T01:intron 35.0%
GCTAGAAACTAATCCAAACT+GGG + Chr1:1432353-1432372 None:intergenic 35.0%
GGAATTTCAGTTCGAATGTA+AGG + Chr1:1432011-1432030 None:intergenic 35.0%
GGGATCATTATGGAAATAAG+AGG - Chr1:1433257-1433276 MsG0180000101.01.T01:intron 35.0%
GTATCAGAATATGCTTCTTC+TGG + Chr1:1435983-1436002 None:intergenic 35.0%
GTCAACAGAACCTACAAAAT+AGG + Chr1:1437345-1437364 None:intergenic 35.0%
GTGTAACAGTTGCTTCATAA+TGG + Chr1:1433006-1433025 None:intergenic 35.0%
GTGTAGTGTTTAGGAAGTTT+GGG - Chr1:1431022-1431041 MsG0180000101.01.T01:CDS 35.0%
TAACTAGACCGAAGCATAAT+AGG + Chr1:1431570-1431589 None:intergenic 35.0%
TAATACGTATCAGTCTGCTA+TGG - Chr1:1436179-1436198 MsG0180000101.01.T01:intron 35.0%
TAATGTGCCATACTTGATTC+TGG - Chr1:1436287-1436306 MsG0180000101.01.T01:intron 35.0%
TACATCACATCATCACATTC+AGG + Chr1:1430597-1430616 None:intergenic 35.0%
TACATTACCAGATGCGATAT+AGG + Chr1:1439011-1439030 None:intergenic 35.0%
TACCTTGCCAATGAAAACTT+TGG + Chr1:1430843-1430862 None:intergenic 35.0%
TATGTAGGAAATTTCTCCTG+CGG - Chr1:1434720-1434739 MsG0180000101.01.T01:intron 35.0%
TCATTATGGAAATAAGAGGC+TGG - Chr1:1433261-1433280 MsG0180000101.01.T01:intron 35.0%
TCCAAGAATGCTTACTAAAG+AGG - Chr1:1438670-1438689 MsG0180000101.01.T01:intron 35.0%
TCCACAGATATATCATTCAC+CGG - Chr1:1433194-1433213 MsG0180000101.01.T01:intron 35.0%
TCTAAGAGGGTCATTAAGAA+AGG - Chr1:1430779-1430798 MsG0180000101.01.T01:intron 35.0%
TCTGGTGAGGATGTTATTAT+TGG - Chr1:1437021-1437040 MsG0180000101.01.T01:intron 35.0%
TGAACAATACCATTCGAAAC+TGG + Chr1:1436239-1436258 None:intergenic 35.0%
TGACCACAATCAGGTAAATA+TGG - Chr1:1436069-1436088 MsG0180000101.01.T01:intron 35.0%
TGTGATACAAAATCAACAGG+TGG - Chr1:1432152-1432171 MsG0180000101.01.T01:intron 35.0%
TGTGTAGTGTTTAGGAAGTT+TGG - Chr1:1431021-1431040 MsG0180000101.01.T01:CDS 35.0%
TGTTGCAATAACCATCTGTA+TGG + Chr1:1432552-1432571 None:intergenic 35.0%
TTACCAAAGGTTGAAGCATA+TGG - Chr1:1438197-1438216 MsG0180000101.01.T01:intron 35.0%
TTATGCAACAATGCACAAAG+AGG + Chr1:1433911-1433930 None:intergenic 35.0%
TTCAAGAGGTAGAAGGTTAT+AGG + Chr1:1433518-1433537 None:intergenic 35.0%
TTCCTTAAGCAATGTCCTTA+AGG + Chr1:1435047-1435066 None:intergenic 35.0%
TTGTCCCTATTTAAGTGGAA+GGG + Chr1:1437778-1437797 None:intergenic 35.0%
TTTGAGTAAGCCAATGATGA+CGG - Chr1:1430672-1430691 MsG0180000101.01.T01:intron 35.0%
! AAGCCAGAAATTCAGGATTT+TGG + Chr1:1437291-1437310 None:intergenic 35.0%
! ACCTTATAAGAGCTGTTTCA+TGG + Chr1:1432416-1432435 None:intergenic 35.0%
! ATATGCGCAGTTCTTTAAGA+CGG + Chr1:1435540-1435559 None:intergenic 35.0%
! ATGCTTCAACCTTTGGTAAT+AGG + Chr1:1438196-1438215 None:intergenic 35.0%
! ATGCTTTTGCTTCATTGCTT+AGG - Chr1:1436320-1436339 MsG0180000101.01.T01:intron 35.0%
! CAGTTTCAAAGACAGCTTTT+AGG + Chr1:1434895-1434914 None:intergenic 35.0%
! CCAAAATTTTCACCATGTGT+TGG + Chr1:1436789-1436808 None:intergenic 35.0%
! CCAACACATGGTGAAAATTT+TGG - Chr1:1436786-1436805 MsG0180000101.01.T01:CDS 35.0%
! CCATTGATTGTATCAACTAC+GGG + Chr1:1434248-1434267 None:intergenic 35.0%
! CCTTATAAGAGCTGTTTCAT+GGG + Chr1:1432415-1432434 None:intergenic 35.0%
! CGTTTGTGTAGAAGCTTTAT+AGG - Chr1:1432467-1432486 MsG0180000101.01.T01:intron 35.0%
! GAATGTCATTTCCCAACAAA+AGG + Chr1:1438899-1438918 None:intergenic 35.0%
! GGAAATGACATTCCTTTTGT+TGG - Chr1:1438884-1438903 MsG0180000101.01.T01:intron 35.0%
! TCAGTGCAATGATTTTCCTT+GGG - Chr1:1438166-1438185 MsG0180000101.01.T01:intron 35.0%
! TCCAACTAAAAGTGAGTTGA+AGG + Chr1:1430227-1430246 None:intergenic 35.0%
! TTCAACCTTTGGTAATAGGT+AGG + Chr1:1438192-1438211 None:intergenic 35.0%
! TTGCTTTGATAGCAAATTGC+AGG + Chr1:1433575-1433594 None:intergenic 35.0%
!! AAAGCTGTCTTTGAAACTGT+TGG - Chr1:1434896-1434915 MsG0180000101.01.T01:intron 35.0%
!! ACCTTCAACTCACTTTTAGT+TGG - Chr1:1430223-1430242 MsG0180000101.01.T01:CDS 35.0%
!! ATGGTATTTTGGGTGTATGA+GGG - Chr1:1436088-1436107 MsG0180000101.01.T01:intron 35.0%
!! CTGGAGTTTTTAGAAGAATG+GGG - Chr1:1434603-1434622 MsG0180000101.01.T01:intron 35.0%
!! TATGGTATTTTGGGTGTATG+AGG - Chr1:1436087-1436106 MsG0180000101.01.T01:intron 35.0%
!! TTTTCTCAAACTTGCTCATC+AGG + Chr1:1438729-1438748 None:intergenic 35.0%
!!! AATCACTTTTTCTCTCTGCT+AGG - Chr1:1429324-1429343 MsG0180000101.01.T01:three_prime_UTR 35.0%
!!! AATCCATCCATCACTGATTT+TGG - Chr1:1436018-1436037 MsG0180000101.01.T01:intron 35.0%
!!! ATCACTTTTTCTCTCTGCTA+GGG - Chr1:1429325-1429344 MsG0180000101.01.T01:three_prime_UTR 35.0%
!!! ATCCATCCATCACTGATTTT+GGG - Chr1:1436019-1436038 MsG0180000101.01.T01:intron 35.0%
!!! GCCTTTTTTTTCCACTATGT+AGG - Chr1:1434705-1434724 MsG0180000101.01.T01:intron 35.0%
!!! GGTTTTGAGACAATGTACAA+TGG - Chr1:1438126-1438145 MsG0180000101.01.T01:intron 35.0%
!!! TCTTTGTTTTGTATGGGTGA+AGG - Chr1:1439181-1439200 MsG0180000101.01.T01:five_prime_UTR 35.0%
AAAAACCACTCCTCTATCTC+AGG - Chr1:1437044-1437063 MsG0180000101.01.T01:intron 40.0%
AAAACCAGCTTGTAAGGTGA+GGG + Chr1:1431051-1431070 None:intergenic 40.0%
AAACGAATTCGACCAGCAAA+TGG - Chr1:1429463-1429482 MsG0180000101.01.T01:three_prime_UTR 40.0%
AAATCACCCAAGAAGATGCT+TGG - Chr1:1429507-1429526 MsG0180000101.01.T01:three_prime_UTR 40.0%
AAATCCACCCAACACAATGA+AGG + Chr1:1430971-1430990 None:intergenic 40.0%
AACAGGATCTTGTACAAGCA+AGG - Chr1:1435951-1435970 MsG0180000101.01.T01:intron 40.0%
AACCAATCATCAATAGACCG+TGG - Chr1:1436581-1436600 MsG0180000101.01.T01:intron 40.0%
AAGAGCAGCTTACAAGCATA+AGG + Chr1:1438623-1438642 None:intergenic 40.0%
AAGTTGACTAGAGATGTCAG+GGG - Chr1:1433430-1433449 MsG0180000101.01.T01:intron 40.0%
AATACTCTCCAACACCAACA+TGG + Chr1:1433083-1433102 None:intergenic 40.0%
AATCACCCAAGAAGATGCTT+GGG - Chr1:1429508-1429527 MsG0180000101.01.T01:three_prime_UTR 40.0%
AATTCTCCTATAGGACGTGA+AGG - Chr1:1433833-1433852 MsG0180000101.01.T01:CDS 40.0%
ACACAAATGCCACAATTAGG+AGG + Chr1:1430925-1430944 None:intergenic 40.0%
ACACTTGTATCCTAATCTGC+AGG - Chr1:1433022-1433041 MsG0180000101.01.T01:CDS 40.0%
ACCAAACCAAACTGATGGTT+TGG - Chr1:1434120-1434139 MsG0180000101.01.T01:intron 40.0%
ACCAAACCATCAGTTTGGTT+TGG + Chr1:1434124-1434143 None:intergenic 40.0%
ACTGAACCAAACCATCAGTT+TGG + Chr1:1434129-1434148 None:intergenic 40.0%
ACTGGTAGAGTGCATATTGT+TGG + Chr1:1437805-1437824 None:intergenic 40.0%
AGACTGATACGTATTACGAG+GGG + Chr1:1436175-1436194 None:intergenic 40.0%
AGCTTATCGAGTGTATCATG+GGG - Chr1:1437573-1437592 MsG0180000101.01.T01:intron 40.0%
AGTAAGCATTCTTGGAGCTA+TGG + Chr1:1438666-1438685 None:intergenic 40.0%
AGTTTACGCCATAGTGAAAC+TGG - Chr1:1437117-1437136 MsG0180000101.01.T01:intron 40.0%
ATAATTGGATCGGACTTCTG+AGG - Chr1:1431505-1431524 MsG0180000101.01.T01:CDS 40.0%
ATACTCTCCAACACCAACAT+GGG + Chr1:1433082-1433101 None:intergenic 40.0%
ATCAACTGTAGGTGTAACCA+AGG - Chr1:1432922-1432941 MsG0180000101.01.T01:intron 40.0%
ATCCAACACCTTCATTGTGT+TGG - Chr1:1430960-1430979 MsG0180000101.01.T01:CDS 40.0%
ATGCTTATGTGGGTGAAGTT+CGG - Chr1:1431756-1431775 MsG0180000101.01.T01:intron 40.0%
ATTATGCAGCTGTCTTGGTT+TGG + Chr1:1434374-1434393 None:intergenic 40.0%
ATTCATTCAGAACACGATGC+AGG - Chr1:1429594-1429613 MsG0180000101.01.T01:three_prime_UTR 40.0%
CAAAGGAATCAAGCTGTTGA+CGG + Chr1:1429570-1429589 None:intergenic 40.0%
CAACCATATGCTTCAACCTT+TGG + Chr1:1438203-1438222 None:intergenic 40.0%
CAATTACCTTCACGTCCTAT+AGG + Chr1:1433842-1433861 None:intergenic 40.0%
CAGACTGATACGTATTACGA+GGG + Chr1:1436176-1436195 None:intergenic 40.0%
CAGCTGCATAATTCACAATG+GGG - Chr1:1434382-1434401 MsG0180000101.01.T01:intron 40.0%
CAGCTTATCGAGTGTATCAT+GGG - Chr1:1437572-1437591 MsG0180000101.01.T01:intron 40.0%
CAGTCGTCCTTTATTCATTG+TGG - Chr1:1435579-1435598 MsG0180000101.01.T01:intron 40.0%
CATACACCCAAAATCAGTGA+TGG + Chr1:1436028-1436047 None:intergenic 40.0%
CATGAACCAAACCAAACTGA+TGG - Chr1:1434115-1434134 MsG0180000101.01.T01:intron 40.0%
CATTATTGTGTTCGGGCATT+GGG - Chr1:1432034-1432053 MsG0180000101.01.T01:CDS 40.0%
CATTGTTTCCTAAAGCTGCT+AGG - Chr1:1430714-1430733 MsG0180000101.01.T01:intron 40.0%
CCCACATAAGCATACTTGTT+AGG + Chr1:1431749-1431768 None:intergenic 40.0%
CCCATGAAACAGCTCTTATA+AGG - Chr1:1432412-1432431 MsG0180000101.01.T01:intron 40.0%
CCTTACAAAACCAGCTTGTA+AGG + Chr1:1431057-1431076 None:intergenic 40.0%
CTCTATCTTCTTACCTTTGG+TGG - Chr1:1436139-1436158 MsG0180000101.01.T01:intron 40.0%
CTGAATTTGTCACCAATCTG+TGG + Chr1:1437422-1437441 None:intergenic 40.0%
CTTCATTGCTTAGGATACCT+TGG - Chr1:1436329-1436348 MsG0180000101.01.T01:intron 40.0%
CTTTGCGGATACTCAAATGA+TGG - Chr1:1432099-1432118 MsG0180000101.01.T01:intron 40.0%
CTTTGCTGATATTATCCACC+TGG + Chr1:1438077-1438096 None:intergenic 40.0%
GAAACTAAGAATCTAGCACC+AGG + Chr1:1438563-1438582 None:intergenic 40.0%
GAAAGTTGACTAGAGATGTC+AGG - Chr1:1433428-1433447 MsG0180000101.01.T01:intron 40.0%
GAACACCATGGACTTCAATA+CGG + Chr1:1438537-1438556 None:intergenic 40.0%
GACAGCTGCATAATTCACAA+TGG - Chr1:1434380-1434399 MsG0180000101.01.T01:intron 40.0%
GCAACACAAATGCCACAATT+AGG + Chr1:1430928-1430947 None:intergenic 40.0%
GCTCTTTGTTACCATACAGA+TGG - Chr1:1432538-1432557 MsG0180000101.01.T01:CDS 40.0%
GGAAAAAGAGGATCAACTGT+AGG - Chr1:1432911-1432930 MsG0180000101.01.T01:intron 40.0%
GGCCTGAGTAACCTAAATAA+TGG - Chr1:1431526-1431545 MsG0180000101.01.T01:CDS 40.0%
GGTTGAGATTCGTGAAAGTA+AGG - Chr1:1437379-1437398 MsG0180000101.01.T01:intron 40.0%
GTACTTAAGTCCACTTGTGA+TGG + Chr1:1433602-1433621 None:intergenic 40.0%
GTATCACAAATGCTTCTTCC+AGG + Chr1:1432140-1432159 None:intergenic 40.0%
GTCATTTCCCAACACTTGAA+AGG + Chr1:1438873-1438892 None:intergenic 40.0%
GTGGAATCCAGAATCAAGTA+TGG + Chr1:1436297-1436316 None:intergenic 40.0%
GTGGCCATTTCATGTTATTC+TGG - Chr1:1436530-1436549 MsG0180000101.01.T01:intron 40.0%
GTTGTCCCTATTTAAGTGGA+AGG + Chr1:1437779-1437798 None:intergenic 40.0%
TAAGTCCGTATTGAAGTCCA+TGG - Chr1:1438529-1438548 MsG0180000101.01.T01:intron 40.0%
TACCAACTACCAGTTTCGAA+TGG - Chr1:1436227-1436246 MsG0180000101.01.T01:intron 40.0%
TACCATTCGAAACTGGTAGT+TGG + Chr1:1436232-1436251 None:intergenic 40.0%
TATTATTTAGGCCTGTGGAC+TGG - Chr1:1434524-1434543 MsG0180000101.01.T01:intron 40.0%
TCAGCTTATCGAGTGTATCA+TGG - Chr1:1437571-1437590 MsG0180000101.01.T01:intron 40.0%
TCATTATTGTGTTCGGGCAT+TGG - Chr1:1432033-1432052 MsG0180000101.01.T01:CDS 40.0%
TCCAACACCTTCATTGTGTT+GGG - Chr1:1430961-1430980 MsG0180000101.01.T01:CDS 40.0%
TCCACTTAAATAGGGACAAC+TGG - Chr1:1437779-1437798 MsG0180000101.01.T01:CDS 40.0%
TCTAACTACCTCAGCGAAAT+CGG + Chr1:1429686-1429705 None:intergenic 40.0%
TCTGTTCGAATACCACAGAT+TGG - Chr1:1437407-1437426 MsG0180000101.01.T01:intron 40.0%
TCTTCGCAAGTGTGATAAAG+TGG + Chr1:1433810-1433829 None:intergenic 40.0%
TGACCAATTGTCATTCGAGA+AGG + Chr1:1437554-1437573 None:intergenic 40.0%
TGACGAAAAATGATGCTCCA+TGG + Chr1:1436400-1436419 None:intergenic 40.0%
TGAGAAGGTTCTTATTGCTC+AGG - Chr1:1431679-1431698 MsG0180000101.01.T01:CDS 40.0%
TGCCCGAACACAATAATGAT+AGG + Chr1:1432032-1432051 None:intergenic 40.0%
TGCCTTAAGGACATTGCTTA+AGG - Chr1:1435042-1435061 MsG0180000101.01.T01:CDS 40.0%
TGCTAAGGACATCCTTCAAA+AGG - Chr1:1433047-1433066 MsG0180000101.01.T01:CDS 40.0%
TGTACAATGGTCATACAGGA+AGG - Chr1:1438139-1438158 MsG0180000101.01.T01:intron 40.0%
TGTGAATTATGCAGCTGTCT+TGG + Chr1:1434379-1434398 None:intergenic 40.0%
TGTTGACCACAAATGCTGAT+GGG - Chr1:1437358-1437377 MsG0180000101.01.T01:intron 40.0%
TTCAGCAGCATATCCTATTC+TGG - Chr1:1434584-1434603 MsG0180000101.01.T01:intron 40.0%
TTCAGTGATAAGCTCACAGT+AGG - Chr1:1431290-1431309 MsG0180000101.01.T01:intron 40.0%
TTCGTAAATGGTTGCTGGAT+GGG - Chr1:1434766-1434785 MsG0180000101.01.T01:CDS 40.0%
TTGTCTCAAAACCACGCATT+TGG + Chr1:1438119-1438138 None:intergenic 40.0%
TTTCGTAAATGGTTGCTGGA+TGG - Chr1:1434765-1434784 MsG0180000101.01.T01:CDS 40.0%
! AACAACCACATCTGACTTGT+TGG + Chr1:1435342-1435361 None:intergenic 40.0%
! ACTCACTTGCTACTGGTAAT+GGG - Chr1:1433620-1433639 MsG0180000101.01.T01:intron 40.0%
! ATAATCTGTAACTAACGGGC+TGG - Chr1:1430571-1430590 MsG0180000101.01.T01:intron 40.0%
! ATCAGGCTCCTTTCTTCTTT+TGG + Chr1:1438712-1438731 None:intergenic 40.0%
! ATCAGTAGCCTTTCAAGTGT+TGG - Chr1:1438862-1438881 MsG0180000101.01.T01:intron 40.0%
! ATGGGGCACAGAAAATTTTG+AGG - Chr1:1434620-1434639 MsG0180000101.01.T01:intron 40.0%
! ATGGTGCAGTGTGTTGATAA+TGG - Chr1:1433537-1433556 MsG0180000101.01.T01:intron 40.0%
! ATTATTGTGTTCGGGCATTG+GGG - Chr1:1432035-1432054 MsG0180000101.01.T01:CDS 40.0%
! ATTCGAGAAGGTATAGCATG+TGG + Chr1:1437542-1437561 None:intergenic 40.0%
! CACCAAAGTTTTCATTGGCA+AGG - Chr1:1430838-1430857 MsG0180000101.01.T01:intron 40.0%
! CATCTCCTTCTTTTCCATGT+GGG + Chr1:1437609-1437628 None:intergenic 40.0%
! CCCGTAGTTGATACAATCAA+TGG - Chr1:1434245-1434264 MsG0180000101.01.T01:intron 40.0%
! CTCAGTGCAATGATTTTCCT+TGG - Chr1:1438165-1438184 MsG0180000101.01.T01:intron 40.0%
! CTTAAGTACTCACTTGCTAC+TGG - Chr1:1433613-1433632 MsG0180000101.01.T01:intron 40.0%
! GGTGTTGGATGCTTTAATGA+AGG + Chr1:1430950-1430969 None:intergenic 40.0%
! GTCATTAAGAAAGGGCATGA+TGG - Chr1:1430788-1430807 MsG0180000101.01.T01:intron 40.0%
! GTGTGATAAAGTGGAAGCAT+AGG + Chr1:1433801-1433820 None:intergenic 40.0%
! GTTTTCTACTGTAATCCAGG+TGG - Chr1:1438059-1438078 MsG0180000101.01.T01:intron 40.0%
! TACTCACTTGCTACTGGTAA+TGG - Chr1:1433619-1433638 MsG0180000101.01.T01:intron 40.0%
! TCAGTAGCCTTTCAAGTGTT+GGG - Chr1:1438863-1438882 MsG0180000101.01.T01:intron 40.0%
! TCTTTCCTTTAGGAAGTGAG+CGG + Chr1:1438355-1438374 None:intergenic 40.0%
! TGGGTCAAAATTGATTCTGG+AGG - Chr1:1430047-1430066 MsG0180000101.01.T01:intron 40.0%
! TGGGTTAAGAGGTATGTTTC+AGG + Chr1:1438965-1438984 None:intergenic 40.0%
!! AATGAAGCAAAAGCATCAGG+TGG + Chr1:1436316-1436335 None:intergenic 40.0%
!! ACAACCACATCTGACTTGTT+GGG + Chr1:1435341-1435360 None:intergenic 40.0%
!! AGACCTGAATGCGTTTTGTT+TGG - Chr1:1439095-1439114 MsG0180000101.01.T01:five_prime_UTR 40.0%
!! AGCAATGAAGCAAAAGCATC+AGG + Chr1:1436319-1436338 None:intergenic 40.0%
!! CTTTGTGTAGTTTTGCTGTG+TGG - Chr1:1431883-1431902 MsG0180000101.01.T01:intron 40.0%
!! TGGCTTTTGATTGTCTTTGC+AGG - Chr1:1438589-1438608 MsG0180000101.01.T01:intron 40.0%
!! TGGTGCAGTGTGTTGATAAT+GGG - Chr1:1433538-1433557 MsG0180000101.01.T01:intron 40.0%
!! TTTTTGAGCAATGTGGGGTT+TGG + Chr1:1434039-1434058 None:intergenic 40.0%
!!! AATGGTTTTGGTTCTGAACC+AGG + Chr1:1433974-1433993 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG - Chr1:1431054-1431073 MsG0180000101.01.T01:CDS 40.0%
!!! CTGGTTTTGTAAGGTGAGTT+AGG - Chr1:1431063-1431082 MsG0180000101.01.T01:CDS 40.0%
!!! GACCTGAATGCGTTTTGTTT+GGG - Chr1:1439096-1439115 MsG0180000101.01.T01:five_prime_UTR 40.0%
!!! GCTTTACTCTTTTTTGCTGC+TGG - Chr1:1437307-1437326 MsG0180000101.01.T01:intron 40.0%
!!! GTAGGCCTTTTTGTTGTTTG+TGG - Chr1:1431308-1431327 MsG0180000101.01.T01:intron 40.0%
!!! GTTTTGTTTGGGTGAAGTAC+CGG - Chr1:1439107-1439126 MsG0180000101.01.T01:five_prime_UTR 40.0%
AAATGTGGGTACCAAATGCG+TGG - Chr1:1438105-1438124 MsG0180000101.01.T01:intron 45.0%
AACACACTGCACCATTCAAG+AGG + Chr1:1433532-1433551 None:intergenic 45.0%
AACACCTTCATTGTGTTGGG+TGG - Chr1:1430964-1430983 MsG0180000101.01.T01:CDS 45.0%
AAGTCCCAACAAGTCAGATG+TGG - Chr1:1435334-1435353 MsG0180000101.01.T01:CDS 45.0%
AATGCCACAATTAGGAGGCT+AGG + Chr1:1430920-1430939 None:intergenic 45.0%
AATGGAAGAGGAAGACGATG+AGG - Chr1:1429481-1429500 MsG0180000101.01.T01:three_prime_UTR 45.0%
ACAATGGGGAATGATGTGTC+CGG - Chr1:1434396-1434415 MsG0180000101.01.T01:intron 45.0%
ACCATTTCCTGACCACAATC+AGG - Chr1:1436060-1436079 MsG0180000101.01.T01:intron 45.0%
ACCTGATTGTGGTCAGGAAA+TGG + Chr1:1436064-1436083 None:intergenic 45.0%
AGGACGTGAAGGTAATTGCT+TGG - Chr1:1433844-1433863 MsG0180000101.01.T01:intron 45.0%
AGGAGGGAAAGATTGAAGTC+TGG + Chr1:1433891-1433910 None:intergenic 45.0%
AGTAGTAGACACGGTCAGAA+GGG - Chr1:1437440-1437459 MsG0180000101.01.T01:intron 45.0%
ATAAATTGGCACTAGGGGTG+TGG - Chr1:1433942-1433961 MsG0180000101.01.T01:intron 45.0%
ATACACAAGAAGACATGCCC+TGG - Chr1:1437480-1437499 MsG0180000101.01.T01:intron 45.0%
ATAGAGACCGAAAGAAGCCA+CGG + Chr1:1436601-1436620 None:intergenic 45.0%
ATCATGCCATCCACCATCTT+CGG + Chr1:1435750-1435769 None:intergenic 45.0%
ATGCACTCTACCAGTACACA+AGG - Chr1:1437810-1437829 MsG0180000101.01.T01:CDS 45.0%
ATGCCACAATTAGGAGGCTA+GGG + Chr1:1430919-1430938 None:intergenic 45.0%
ATGCGCACAAACATAGTGCT+AGG + Chr1:1431809-1431828 None:intergenic 45.0%
ATGGCATGATCTTGTGTCCA+AGG - Chr1:1435760-1435779 MsG0180000101.01.T01:intron 45.0%
ATGGCATTCTATGGCACAAG+AGG + Chr1:1436509-1436528 None:intergenic 45.0%
ATGGCCACAATGGCATTCTA+TGG + Chr1:1436518-1436537 None:intergenic 45.0%
ATTCCTACCAGGGTTCTTCA+GGG - Chr1:1431964-1431983 MsG0180000101.01.T01:intron 45.0%
ATTCGACCAGCAAATGGAAG+AGG - Chr1:1429469-1429488 MsG0180000101.01.T01:three_prime_UTR 45.0%
ATTGAGAAAGCTGAGACGTC+GGG - Chr1:1434822-1434841 MsG0180000101.01.T01:intron 45.0%
CAAAACCAGCTTGTAAGGTG+AGG + Chr1:1431052-1431071 None:intergenic 45.0%
CAATAGACCGTGGCTTCTTT+CGG - Chr1:1436591-1436610 MsG0180000101.01.T01:intron 45.0%
CACAAATGCTTCTTCCAGGA+AGG + Chr1:1432136-1432155 None:intergenic 45.0%
CACCCAAACAAAACGCATTC+AGG + Chr1:1439101-1439120 None:intergenic 45.0%
CATTGAGAAAGCTGAGACGT+CGG - Chr1:1434821-1434840 MsG0180000101.01.T01:intron 45.0%
CCAGGATTATGCTGAGATTC+GGG + Chr1:1429655-1429674 None:intergenic 45.0%
CCATCAGATTCCGTCATCAT+TGG + Chr1:1430685-1430704 None:intergenic 45.0%
CCTAATCTGCAGGTATGCTA+AGG - Chr1:1433032-1433051 MsG0180000101.01.T01:CDS 45.0%
CCTTAGCATACCTGCAGATT+AGG + Chr1:1433035-1433054 None:intergenic 45.0%
CGTGATTGCATGATTGCTCA+TGG - Chr1:1438327-1438346 MsG0180000101.01.T01:intron 45.0%
CTAAAGAGTCCGCCAAGTAA+AGG + Chr1:1433298-1433317 None:intergenic 45.0%
CTATCTCAGGAAGAGCAACA+AGG - Chr1:1437057-1437076 MsG0180000101.01.T01:intron 45.0%
CTGTTGACCACAAATGCTGA+TGG - Chr1:1437357-1437376 MsG0180000101.01.T01:intron 45.0%
CTTCCAAGAGCTAATGGCTA+TGG - Chr1:1438640-1438659 MsG0180000101.01.T01:intron 45.0%
CTTCCTAAACACTACACAGG+CGG + Chr1:1431019-1431038 None:intergenic 45.0%
GAAAGATTGAAGTCTGGGTC+AGG + Chr1:1433885-1433904 None:intergenic 45.0%
GAGAAGGATTTGACTGAGCT+TGG - Chr1:1431612-1431631 MsG0180000101.01.T01:intron 45.0%
GATGACAAGATCCATTCTCG+TGG - Chr1:1438222-1438241 MsG0180000101.01.T01:intron 45.0%
GCAACAATGCACAAAGAGGA+GGG + Chr1:1433907-1433926 None:intergenic 45.0%
GCAGACTGATACGTATTACG+AGG + Chr1:1436177-1436196 None:intergenic 45.0%
GCCAGGATTATGCTGAGATT+CGG + Chr1:1429656-1429675 None:intergenic 45.0%
GCCAGTTGTCCCTATTTAAG+TGG + Chr1:1437783-1437802 None:intergenic 45.0%
GCCGGTGAATGATATATCTG+TGG + Chr1:1433198-1433217 None:intergenic 45.0%
GCTATGGGAAAACAGGCAAT+GGG - Chr1:1436195-1436214 MsG0180000101.01.T01:intron 45.0%
GGAGGGAAAGATTGAAGTCT+GGG + Chr1:1433890-1433909 None:intergenic 45.0%
GGGTCGAATTTCGATATCAG+CGG + Chr1:1429635-1429654 None:intergenic 45.0%
GTGGTCAGGAAATGGTATGA+TGG + Chr1:1436056-1436075 None:intergenic 45.0%
TACTCTCCAACACCAACATG+GGG + Chr1:1433081-1433100 None:intergenic 45.0%
TATATTGCCCTGAAGAACCC+TGG + Chr1:1431974-1431993 None:intergenic 45.0%
TATCGAGTGTATCATGGGGA+AGG - Chr1:1437577-1437596 MsG0180000101.01.T01:intron 45.0%
TATTCCTACCAGGGTTCTTC+AGG - Chr1:1431963-1431982 MsG0180000101.01.T01:intron 45.0%
TCAGTCTGCTATGGGAAAAC+AGG - Chr1:1436188-1436207 MsG0180000101.01.T01:intron 45.0%
TCTCAACCCATCAGCATTTG+TGG + Chr1:1437367-1437386 None:intergenic 45.0%
TGCAACAATGCACAAAGAGG+AGG + Chr1:1433908-1433927 None:intergenic 45.0%
TGCACCATTCAAGAGGTAGA+AGG + Chr1:1433525-1433544 None:intergenic 45.0%
TGCCTTGTAAGAATCTGCAC+AGG + Chr1:1438255-1438274 None:intergenic 45.0%
TGCTATGGGAAAACAGGCAA+TGG - Chr1:1436194-1436213 MsG0180000101.01.T01:intron 45.0%
TGGCATGATCTTGTGTCCAA+GGG - Chr1:1435761-1435780 MsG0180000101.01.T01:intron 45.0%
TGGGCTATTATTTAGGCCTG+TGG - Chr1:1434519-1434538 MsG0180000101.01.T01:intron 45.0%
TGTCAGGGGTTATGTGCAAA+AGG - Chr1:1433444-1433463 MsG0180000101.01.T01:intron 45.0%
TGTGCCATAGAATGCCATTG+TGG - Chr1:1436511-1436530 MsG0180000101.01.T01:intron 45.0%
TGTTGCTCTTCCTGAGATAG+AGG + Chr1:1437057-1437076 None:intergenic 45.0%
TTCCTAAAGCTGCTAGGCTT+AGG - Chr1:1430720-1430739 MsG0180000101.01.T01:intron 45.0%
TTCCTAAGCCTAGCAGCTTT+AGG + Chr1:1430725-1430744 None:intergenic 45.0%
TTGGGCCTACCTATTACCAA+AGG - Chr1:1438184-1438203 MsG0180000101.01.T01:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG + Chr1:1430965-1430984 None:intergenic 45.0%
! ACTCGTTGTGTTTCTGCTTC+AGG - Chr1:1433760-1433779 MsG0180000101.01.T01:CDS 45.0%
! AGCCACGGTCTATTGATGAT+TGG + Chr1:1436586-1436605 None:intergenic 45.0%
! ATTTTTCGTCAACTCCCTGC+TGG - Chr1:1436409-1436428 MsG0180000101.01.T01:intron 45.0%
! CACCCAAAATCAGTGATGGA+TGG + Chr1:1436024-1436043 None:intergenic 45.0%
! CTCACTTGCTACTGGTAATG+GGG - Chr1:1433621-1433640 MsG0180000101.01.T01:intron 45.0%
! GCATCTCCTTCTTTTCCATG+TGG + Chr1:1437610-1437629 None:intergenic 45.0%
! TCTGTTTTGTGACTCTGCCA+TGG + Chr1:1431783-1431802 None:intergenic 45.0%
! TTTGGTAATAGGTAGGCCCA+AGG + Chr1:1438185-1438204 None:intergenic 45.0%
!! ACATCTGACTTGTTGGGACT+TGG + Chr1:1435335-1435354 None:intergenic 45.0%
!! ACTTGGCGGACTCTTTAGAA+TGG - Chr1:1433300-1433319 MsG0180000101.01.T01:intron 45.0%
!! AGGTCTTCGATTTGGAGAGA+TGG - Chr1:1438302-1438321 MsG0180000101.01.T01:intron 45.0%
!! CAAAGAAGATTTTGGTCGGC+CGG - Chr1:1436757-1436776 MsG0180000101.01.T01:CDS 45.0%
!! CCAATGATGACGGAATCTGA+TGG - Chr1:1430682-1430701 MsG0180000101.01.T01:intron 45.0%
!! GCAGTGTGTTGATAATGGGA+AGG - Chr1:1433542-1433561 MsG0180000101.01.T01:intron 45.0%
!! TCACTTGCTACTGGTAATGG+GGG - Chr1:1433622-1433641 MsG0180000101.01.T01:intron 45.0%
!! TAAATTAATTATGAATAAAT+TGG - Chr1:1433928-1433947 MsG0180000101.01.T01:intron 5.0%
AAGATCCATTCTCGTGGACG+AGG - Chr1:1438228-1438247 MsG0180000101.01.T01:intron 50.0%
AAGGAGATGCTTCCCCATGT+TGG - Chr1:1433066-1433085 MsG0180000101.01.T01:CDS 50.0%
AAGTCCATGGTGTTCTCTCC+TGG - Chr1:1438542-1438561 MsG0180000101.01.T01:intron 50.0%
ACGAGAGGAAGCAGTCAACA+TGG + Chr1:1438768-1438787 None:intergenic 50.0%
ACTCGAATGAAGGCCCAGTT+TGG - Chr1:1432337-1432356 MsG0180000101.01.T01:intron 50.0%
AGATCCATTCTCGTGGACGA+GGG - Chr1:1438229-1438248 MsG0180000101.01.T01:intron 50.0%
ATGCTTCCCCATGTTGGTGT+TGG - Chr1:1433072-1433091 MsG0180000101.01.T01:intron 50.0%
CACAGCCCAAGCATCTTCTT+GGG + Chr1:1429516-1429535 None:intergenic 50.0%
CAGATGCGATATAGGAAGCG+AGG + Chr1:1439003-1439022 None:intergenic 50.0%
CAGATTCTTCACCAGTCCAC+AGG + Chr1:1434538-1434557 None:intergenic 50.0%
CAGTAGTAGACACGGTCAGA+AGG - Chr1:1437439-1437458 MsG0180000101.01.T01:intron 50.0%
CCCGAATCTCAGCATAATCC+TGG - Chr1:1429652-1429671 MsG0180000101.01.T01:three_prime_UTR 50.0%
CGCACAAACATAGTGCTAGG+TGG + Chr1:1431806-1431825 None:intergenic 50.0%
CGTCTTCCTCTTCCATTTGC+TGG + Chr1:1429478-1429497 None:intergenic 50.0%
CTCGCTTCCTATATCGCATC+TGG - Chr1:1439001-1439020 MsG0180000101.01.T01:five_prime_UTR 50.0%
CTCTTCCTGAGATAGAGGAG+TGG + Chr1:1437052-1437071 None:intergenic 50.0%
CTTACAAGGCAACCTGCTGA+GGG - Chr1:1438264-1438283 MsG0180000101.01.T01:intron 50.0%
GAACGTGGATCACACACACA+TGG - Chr1:1438788-1438807 MsG0180000101.01.T01:intron 50.0%
GAGGTAGTGATGAGGCTACT+GGG + Chr1:1438984-1439003 None:intergenic 50.0%
GAGTGTCCGTATGATCAAGG+AGG - Chr1:1431636-1431655 MsG0180000101.01.T01:intron 50.0%
GATGAGGCTACTGGGTTAAG+AGG + Chr1:1438976-1438995 None:intergenic 50.0%
GCTGCTCTTCCAAGAGCTAA+TGG - Chr1:1438634-1438653 MsG0180000101.01.T01:intron 50.0%
GGCCTGTGCAGATTCTTACA+AGG - Chr1:1438250-1438269 MsG0180000101.01.T01:intron 50.0%
GTAGTAGACACGGTCAGAAG+GGG - Chr1:1437441-1437460 MsG0180000101.01.T01:intron 50.0%
GTGATGCCTTCTACAGTCCA+GGG + Chr1:1437500-1437519 None:intergenic 50.0%
TAGGAAGCGAGGTAGTGATG+AGG + Chr1:1438992-1439011 None:intergenic 50.0%
TCACAGCCCAAGCATCTTCT+TGG + Chr1:1429517-1429536 None:intergenic 50.0%
TCATCGCGACCCTGATATGT+TGG - Chr1:1434792-1434811 MsG0180000101.01.T01:intron 50.0%
TCATGCCATCCACCATCTTC+GGG + Chr1:1435749-1435768 None:intergenic 50.0%
TCTTACAAGGCAACCTGCTG+AGG - Chr1:1438263-1438282 MsG0180000101.01.T01:intron 50.0%
TGCCACAATTAGGAGGCTAG+GGG + Chr1:1430918-1430937 None:intergenic 50.0%
TGGAAATAAGAGGCTGGACC+TGG - Chr1:1433267-1433286 MsG0180000101.01.T01:intron 50.0%
TGTTTGTGCGCATGCTCTCT+CGG - Chr1:1431816-1431835 MsG0180000101.01.T01:intron 50.0%
TTACAAGGCAACCTGCTGAG+GGG - Chr1:1438265-1438284 MsG0180000101.01.T01:intron 50.0%
! CGTGATGGAGGTCTTCGATT+TGG - Chr1:1438294-1438313 MsG0180000101.01.T01:intron 50.0%
! CTAGGGGTGTGGTAAAAACC+TGG - Chr1:1433953-1433972 MsG0180000101.01.T01:CDS 50.0%
! GAAAGGGCATGATGGTGAAG+AGG - Chr1:1430796-1430815 MsG0180000101.01.T01:intron 50.0%
! GCGACCCTGATATGTTGGTT+AGG - Chr1:1434797-1434816 MsG0180000101.01.T01:intron 50.0%
! GTAGTGACCAGTGGCTTTTG+AGG + Chr1:1436372-1436391 None:intergenic 50.0%
! GTATCAACTACGGGAGTGCA+TGG + Chr1:1434239-1434258 None:intergenic 50.0%
! TACTAGAGCTGGAGTGTCAC+AGG - Chr1:1433662-1433681 MsG0180000101.01.T01:intron 50.0%
! TGGCCATAGCCATTAGCTCT+TGG + Chr1:1438646-1438665 None:intergenic 50.0%
! TGTCCTTCTGGTGTTTCTGC+CGG + Chr1:1434418-1434437 None:intergenic 50.0%
!! AAACAGGGCACAAGAGTGTC+TGG - Chr1:1437003-1437022 MsG0180000101.01.T01:intron 50.0%
!! CACCATGTGTTGGCTCTATC+CGG + Chr1:1436779-1436798 None:intergenic 50.0%
!! CTGTGGACTGGTGAAGAATC+TGG - Chr1:1434536-1434555 MsG0180000101.01.T01:intron 50.0%
!! GGAGAGTGTCCGTATGATCA+AGG - Chr1:1431633-1431652 MsG0180000101.01.T01:intron 50.0%
!! GGTGAAGAATCTGGCCTTGA+TGG - Chr1:1434545-1434564 MsG0180000101.01.T01:intron 50.0%
!! TCTCTCGGGCTAGTGCAAAA+GGG - Chr1:1431831-1431850 MsG0180000101.01.T01:CDS 50.0%
!! TCTGACTTGTTGGGACTTGG+AGG + Chr1:1435332-1435351 None:intergenic 50.0%
!! TGATGGCTTTGATGTCGTGC+AGG - Chr1:1435477-1435496 MsG0180000101.01.T01:CDS 50.0%
!!! GGGGAAGCATCTCCTTTTGA+AGG + Chr1:1433062-1433081 None:intergenic 50.0%
!!! GTGTTGTTTTGCAGGGCATG+AGG - Chr1:1436854-1436873 MsG0180000101.01.T01:CDS 50.0%
AATAAGAGGCTGGACCTGGC+AGG - Chr1:1433271-1433290 MsG0180000101.01.T01:intron 55.0%
AATGCTGCGGGTACTAGAGC+TGG - Chr1:1433651-1433670 MsG0180000101.01.T01:intron 55.0%
ACACAGGCGGCGATTTCTCT+AGG + Chr1:1431006-1431025 None:intergenic 55.0%
ACTGCTTCCTCTCGTGAACG+TGG - Chr1:1438773-1438792 MsG0180000101.01.T01:intron 55.0%
ACTGGTCACTACGAGAGCCA+TGG - Chr1:1436380-1436399 MsG0180000101.01.T01:intron 55.0%
AGCACCAGGAGAGAACACCA+TGG + Chr1:1438549-1438568 None:intergenic 55.0%
ATCCACAGCGTTCACACACG+TGG + Chr1:1438407-1438426 None:intergenic 55.0%
ATGCCATCCACCATCTTCGG+GGG + Chr1:1435747-1435766 None:intergenic 55.0%
ATGGCTCTCGTAGTGACCAG+TGG + Chr1:1436381-1436400 None:intergenic 55.0%
ATGGGGGCAAGCAAATGCTG+CGG - Chr1:1433638-1433657 MsG0180000101.01.T01:intron 55.0%
ATTGGGGTTTGTCGCCGACA+AGG - Chr1:1432051-1432070 MsG0180000101.01.T01:intron 55.0%
CAAGTGCGCACAGAAGTAGC+CGG + Chr1:1433216-1433235 None:intergenic 55.0%
CACAATTAGGAGGCTAGGGG+CGG + Chr1:1430915-1430934 None:intergenic 55.0%
CATGCCATCCACCATCTTCG+GGG + Chr1:1435748-1435767 None:intergenic 55.0%
CCATCAGTCCGATTTCGCTG+AGG - Chr1:1429675-1429694 MsG0180000101.01.T01:intron 55.0%
CCTCAGCGAAATCGGACTGA+TGG + Chr1:1429678-1429697 None:intergenic 55.0%
CGAGGTAGTGATGAGGCTAC+TGG + Chr1:1438985-1439004 None:intergenic 55.0%
CGAGTGTATCATGGGGAAGG+TGG - Chr1:1437580-1437599 MsG0180000101.01.T01:intron 55.0%
CGGGGGTGATCCTGAAGAAA+TGG + Chr1:1435730-1435749 None:intergenic 55.0%
CTGGCAGGTCCTTTACTTGG+CGG - Chr1:1433286-1433305 MsG0180000101.01.T01:intron 55.0%
GACATGCCCTGGACTGTAGA+AGG - Chr1:1437491-1437510 MsG0180000101.01.T01:intron 55.0%
GACCTGGCAGGTCCTTTACT+TGG - Chr1:1433283-1433302 MsG0180000101.01.T01:intron 55.0%
GCGGAGGGCTGAAGATGATA+GGG - Chr1:1433237-1433256 MsG0180000101.01.T01:intron 55.0%
GGCTACTTCTGTGCGCACTT+GGG - Chr1:1433215-1433234 MsG0180000101.01.T01:intron 55.0%
GGCTGCCCACATGGAAAAGA+AGG - Chr1:1437601-1437620 MsG0180000101.01.T01:intron 55.0%
GGGACTGATTGCACCACCAA+AGG + Chr1:1436155-1436174 None:intergenic 55.0%
GGTGATGCCTTCTACAGTCC+AGG + Chr1:1437501-1437520 None:intergenic 55.0%
GTGTGATCCACGTTCACGAG+AGG + Chr1:1438783-1438802 None:intergenic 55.0%
GTTTGTGCGCATGCTCTCTC+GGG - Chr1:1431817-1431836 MsG0180000101.01.T01:intron 55.0%
TACTTCTGTGCGCACTTGGG+CGG - Chr1:1433218-1433237 MsG0180000101.01.T01:intron 55.0%
TCGCCGCCTGTGTAGTGTTT+AGG - Chr1:1431013-1431032 MsG0180000101.01.T01:CDS 55.0%
TGGAGCCGCTCACTTCCTAA+AGG - Chr1:1438347-1438366 MsG0180000101.01.T01:intron 55.0%
TGGAGTTGCTTCGTCCTTCC+TGG - Chr1:1432119-1432138 MsG0180000101.01.T01:intron 55.0%
TGTCCGGCAGAAACACCAGA+AGG - Chr1:1434412-1434431 MsG0180000101.01.T01:intron 55.0%
TGTGGGTGAAGTTCGGTCCA+TGG - Chr1:1431763-1431782 MsG0180000101.01.T01:intron 55.0%
TTCAGGATCACCCCCGAAGA+TGG - Chr1:1435734-1435753 MsG0180000101.01.T01:intron 55.0%
TTGCCCTGAAGAACCCTGGT+AGG + Chr1:1431970-1431989 None:intergenic 55.0%
! GTTTTGCAGGGCATGAGGCA+TGG - Chr1:1436859-1436878 MsG0180000101.01.T01:CDS 55.0%
!! CTCTCGGGCTAGTGCAAAAG+GGG - Chr1:1431832-1431851 MsG0180000101.01.T01:CDS 55.0%
!! CTCTCTCGGGCTAGTGCAAA+AGG - Chr1:1431830-1431849 MsG0180000101.01.T01:CDS 55.0%
AGGATCACCCCCGAAGATGG+TGG - Chr1:1435737-1435756 MsG0180000101.01.T01:intron 60.0%
CACGGTCAGAAGGGGACTGT+TGG - Chr1:1437449-1437468 MsG0180000101.01.T01:intron 60.0%
CGCCAAGTAAAGGACCTGCC+AGG + Chr1:1433288-1433307 None:intergenic 60.0%
CGCCCCTAGCCTCCTAATTG+TGG - Chr1:1430913-1430932 MsG0180000101.01.T01:intron 60.0%
CGGCTACTTCTGTGCGCACT+TGG - Chr1:1433214-1433233 MsG0180000101.01.T01:intron 60.0%
GCAGCCCTCACCTTACAAGC+TGG - Chr1:1431044-1431063 MsG0180000101.01.T01:CDS 60.0%
GCGAAATCGGACTGATGGCC+AGG + Chr1:1429673-1429692 None:intergenic 60.0%
GGCCGGATAGAGCCAACACA+TGG - Chr1:1436774-1436793 MsG0180000101.01.T01:CDS 60.0%
GGCGGAGGGCTGAAGATGAT+AGG - Chr1:1433236-1433255 MsG0180000101.01.T01:intron 60.0%
GTAGCTTGGGGAATCACCGC+AGG + Chr1:1434739-1434758 None:intergenic 60.0%
GTCCACGTGTGTGAACGCTG+TGG - Chr1:1438402-1438421 MsG0180000101.01.T01:intron 60.0%
TGGGGGCAAGCAAATGCTGC+GGG - Chr1:1433639-1433658 MsG0180000101.01.T01:intron 60.0%
!! GGGCACAAGAGTGTCTGGTG+AGG - Chr1:1437008-1437027 MsG0180000101.01.T01:intron 60.0%
!! TCACCCCCGAAGATGGTGGA+TGG - Chr1:1435741-1435760 MsG0180000101.01.T01:intron 60.0%
CAAGGCAACCTGCTGAGGGG+CGG - Chr1:1438268-1438287 MsG0180000101.01.T01:intron 65.0%
CAGGCCCTCGTCCACGAGAA+TGG + Chr1:1438236-1438255 None:intergenic 65.0%
TCTGTGCGCACTTGGGCGGA+GGG - Chr1:1433222-1433241 MsG0180000101.01.T01:intron 65.0%
TTCTGTGCGCACTTGGGCGG+AGG - Chr1:1433221-1433240 MsG0180000101.01.T01:intron 65.0%
GAGGGGCGGTCACGTGATGG+AGG - Chr1:1438282-1438301 MsG0180000101.01.T01:intron 70.0%
GCTGAGGGGCGGTCACGTGA+TGG - Chr1:1438279-1438298 MsG0180000101.01.T01:intron 70.0%
GGGGAAGGTGGCTGCCCACA+TGG - Chr1:1437592-1437611 MsG0180000101.01.T01:intron 70.0%
TCACGTGACCGCCCCTCAGC+AGG + Chr1:1438279-1438298 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 1429283 1439306 1429283 ID=MsG0180000101.01;Name=MsG0180000101.01
Chr1 mRNA 1429283 1439306 1429283 ID=MsG0180000101.01.T01;Parent=MsG0180000101.01;Name=MsG0180000101.01.T01;_AED=0.48;_eAED=0.49;_QI=475|0.52|0.68|1|0.90|0.81|22|554|894
Chr1 exon 1438893 1439306 1438893 ID=MsG0180000101.01.T01:exon:7233;Parent=MsG0180000101.01.T01
Chr1 exon 1437730 1437949 1437730 ID=MsG0180000101.01.T01:exon:7234;Parent=MsG0180000101.01.T01
Chr1 exon 1436736 1436888 1436736 ID=MsG0180000101.01.T01:exon:7235;Parent=MsG0180000101.01.T01
Chr1 exon 1435632 1435696 1435632 ID=MsG0180000101.01.T01:exon:7236;Parent=MsG0180000101.01.T01
Chr1 exon 1435460 1435545 1435460 ID=MsG0180000101.01.T01:exon:7237;Parent=MsG0180000101.01.T01
Chr1 exon 1435255 1435388 1435255 ID=MsG0180000101.01.T01:exon:7238;Parent=MsG0180000101.01.T01
Chr1 exon 1434929 1435168 1434929 ID=MsG0180000101.01.T01:exon:7239;Parent=MsG0180000101.01.T01
Chr1 exon 1434735 1434807 1434735 ID=MsG0180000101.01.T01:exon:7240;Parent=MsG0180000101.01.T01
Chr1 exon 1434151 1434227 1434151 ID=MsG0180000101.01.T01:exon:7241;Parent=MsG0180000101.01.T01
Chr1 exon 1433948 1434055 1433948 ID=MsG0180000101.01.T01:exon:7242;Parent=MsG0180000101.01.T01
Chr1 exon 1433746 1433862 1433746 ID=MsG0180000101.01.T01:exon:7243;Parent=MsG0180000101.01.T01
Chr1 exon 1432935 1433090 1432935 ID=MsG0180000101.01.T01:exon:7244;Parent=MsG0180000101.01.T01
Chr1 exon 1432508 1432633 1432508 ID=MsG0180000101.01.T01:exon:7245;Parent=MsG0180000101.01.T01
Chr1 exon 1432341 1432418 1432341 ID=MsG0180000101.01.T01:exon:7246;Parent=MsG0180000101.01.T01
Chr1 exon 1431977 1432068 1431977 ID=MsG0180000101.01.T01:exon:7247;Parent=MsG0180000101.01.T01
Chr1 exon 1431819 1431861 1431819 ID=MsG0180000101.01.T01:exon:7248;Parent=MsG0180000101.01.T01
Chr1 exon 1431668 1431721 1431668 ID=MsG0180000101.01.T01:exon:7249;Parent=MsG0180000101.01.T01
Chr1 exon 1431437 1431580 1431437 ID=MsG0180000101.01.T01:exon:7250;Parent=MsG0180000101.01.T01
Chr1 exon 1430938 1431188 1430938 ID=MsG0180000101.01.T01:exon:7251;Parent=MsG0180000101.01.T01
Chr1 exon 1430089 1430497 1430089 ID=MsG0180000101.01.T01:exon:7252;Parent=MsG0180000101.01.T01
Chr1 exon 1429706 1429978 1429706 ID=MsG0180000101.01.T01:exon:7253;Parent=MsG0180000101.01.T01
Chr1 exon 1429283 1429683 1429283 ID=MsG0180000101.01.T01:exon:7254;Parent=MsG0180000101.01.T01
Chr1 five_prime_UTR 1438893 1439306 1438893 ID=MsG0180000101.01.T01:five_prime_utr;Parent=MsG0180000101.01.T01
Chr1 five_prime_UTR 1437889 1437949 1437889 ID=MsG0180000101.01.T01:five_prime_utr;Parent=MsG0180000101.01.T01
Chr1 CDS 1437730 1437888 1437730 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1436736 1436888 1436736 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1435632 1435696 1435632 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1435460 1435545 1435460 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1435255 1435388 1435255 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1434929 1435168 1434929 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1434735 1434807 1434735 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1434151 1434227 1434151 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1433948 1434055 1433948 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1433746 1433862 1433746 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1432935 1433090 1432935 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1432508 1432633 1432508 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1432341 1432418 1432341 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1431977 1432068 1431977 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1431819 1431861 1431819 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1431668 1431721 1431668 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1431437 1431580 1431437 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1430938 1431188 1430938 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1430089 1430497 1430089 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 CDS 1429859 1429978 1429859 ID=MsG0180000101.01.T01:cds;Parent=MsG0180000101.01.T01
Chr1 three_prime_UTR 1429706 1429858 1429706 ID=MsG0180000101.01.T01:three_prime_utr;Parent=MsG0180000101.01.T01
Chr1 three_prime_UTR 1429283 1429683 1429283 ID=MsG0180000101.01.T01:three_prime_utr;Parent=MsG0180000101.01.T01
Gene Sequence

>MsG0180000101.01.T01

ATGGAGAAACTGACATTGTTTCCTAAAGCTGCTAGGCTTAGGAATCTGACGTATTCAGCTCCTTTGTATGTTGATGTTTCTAAGAGGGTCATTAAGAAAGGGCATGATGGTGAAGAGGTCACTGAGACTCAAGATTTCACCAAAGTTTTCATTGGCAAGGAGAAGATGAGCACCAATCATGTCTATGTCTTTAAGAAGAGGCAACCTAACAAGTATGCTTATGTGGGTGAAGTTCGGTCCATGGCAGAGTCACAAAACAGACCACCTAGCACTATGTTTGTGCGCATGCTCTCTCGGGCTAGTGCAAAAGGGGTTGCACTTGATTATATTGGAAAAAGAGGATCAACTGTAGGTGTAACCAAGGAAAAGAGAATTAAGTATGCTAAGGACATCCTTCAAAAGGAGATGCTTCCCCATGTTGGTGTTGGAGAGTATTGCGAGACTAAAAAAGCATACTATTTGGATATATCATTCACCGGCTACTTCTGTGCGCACTTGGGCGGAGGGCTGAAGATGATAGGGATCATTATGGAAATAAGAGGCTGGACCTGGCAGGTCCTTTACTTGGCGGACTCTTTAGAATGGTTTGTATCTCAACTATTCAGAAAGTTGACTAGAGATGTCAGGGGTTATGTGCAAAAGGTTTGTTCTACTTTTAAGTTTTGTTGTGATATTTATTCTGCATTCATTGCCTATAACCTTCTACCTCTTGAATGGTGCAGTGTGTTGATAATGGGAAGGATGTTAACCTGCAATTTGCTATCAAAGCAAAAAACCATCACAAGTGGACTTAAGTACTCACTTGCTACTGGTAATGGGGGCAAGCAAATGCTGCGGGTGCTAAATCGTTTAACCTATGCTTCCACTTTATCACACTTGCGAAGATTGAATTCTCCTATAGGACGTGAAGGAAAGTTGGCCAAACCAAGACAGCTGCATAATTCACAATGGGGAATGATGTGTCCGGCAGAAACACCAGAAGGACAAGCCTGTGGACTGGTGAAGAATCTGGCCTTGATGGTATACATTACAGTTGGTTCAGCAGCATATCCTATTCTGGAGTTTTTAGAAGAATGGGGCACAGAAAATTTTGAGGAAATTTCTCCTGCGGTGATTCCCCAAGCTACAAAAATTTTCGTAAATGGTTGCTGGATGGGTATTCATCGCGACCCTGATATGTTGGTTAGGACATTGAGAAAGCTGAGACGTCGGGTTGATGTTAATACTGAAGTTGGGGTTGTTAGAGATATCCGTCTTAAAGAACTGCGCATATATACAGATTATGGTCGCTGCAGTCGTCCTTTATTCATTGTGGATAAACAAAGGCTTCTCATAAAGAAGAAAGACATTCATTCTTTGCAGCAAAGGGATCTTGTACAAGCAAGGCTGAATCCAGAAGAAGCATATTCTGATACTTACACTCACTGTGAAATCCATCCATCACTGATTTTGGGTGTATGTGCGTCCATCATACCATTTCCTGACCACAATCAGTCCCCTCGTAATACGTATCAGTCTGCTATGGGAAAACAGGCAATGGGAATTTATGTTACCAACTACCAGTTTCGAATGAATGCCATTGTGGCCATTTCATGTTATTCTGGTTATAATCAAGAAGATTCTGTCATCATGAACCAATCATCAATAGACCGTGGCTTCTTTCGAGATGAAGAGAAAAAATGGGAACTCTTGTCAAAGAAGATTTTGGGCATGAGGCATGGTTCTTATGATAAATTGGATGATGATGGTCTTGCTCCACCTGGCACAAGAGTGTCTGGTGAGGATGTTATTATTGGAAAAACCACTCCTCTATCTCAGGAAGAGCAACAAGGACAAGCTGCTCGTTACTCAAAACGTGATCACAGCATAAGTTTACGCCATAGTGAAACTGGAATAGTAGATCAAGTGAGATCTGTTCGAATACCACAGATTGGTGACAAATTCAGTAGTAGACACGGTCAGAAGGGGACTGTTGGTATGACTTATACACAAGAAGACATGCCCTGGACTGTAGAAGGCATCACCCCTGATATTATTGTCAATCCACATGCTATACCTTCTCGAATGACAATTGGTCAGCTTATCGAGTGTATCATGGGGAAGGTGGCTGCCCACATGGAAAAGAAGGAGATGCTACTCCTTTTACAGATGTTACTCAAAGCTTTACACAAATGTGGGTACCAAATGCGTGGTTTTGAGACAATGTACAATGGTCATACAGGAAGGCGTCTCAGTGCAATGATTTTCCTTGGGCCTACCTATTACCAAAGGTTGAAGCATATGGTTGATGACAAGATCCATTCTCGTGGACGAGGGCCTGTGCAGATTCTTACAAGGCAACCTGCTGAGGGGCGGTCACGTGATGGAGGTCTTCGATTTGGAGAGATGGAACGTGATTGCATGATTGCTCATGGAGCCGCTCACTTCCTAAAGGAAAGACTGTTTGATCAAAGTGATGCATATAGAGTCCACGTGTGTGAACGCTGTGGATTGATAGCTATTGCAAATCTGAAGAAGAATTCTTTTGAGTGTAGGGGCTGCAAGAACAAAACTGACATTGTTCAGGTTTATATTCCTTATGCTTGTAAGCTGCTCTTCCAAGAGCTAATGGCTATGGCCATAGCTCCAAGAATGCTTACTAAAGAGGTGAAAGCTATAAAAGACCAAAAGAAGAAAGGAGCCTGA

Protein sequence

>MsG0180000101.01.T01

MEKLTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGVALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYLDISFTGYFCAHLGGGLKMIGIIMEIRGWTWQVLYLADSLEWFVSQLFRKLTRDVRGYVQKVCSTFKFCCDIYSAFIAYNLLPLEWCSVLIMGRMLTCNLLSKQKTITSGLKYSLATGNGGKQMLRVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMNAIVAISCYSGYNQEDSVIMNQSSIDRGFFRDEEKKWELLSKKILGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQGQAARYSKRDHSISLRHSETGIVDQVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMEKKEMLLLLQMLLKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKAIKDQKKKGA*