AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010196.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010196.01.T01 MTR_2g085330 92.227 669 24 1 1 641 6 674 0.0 1229
MsG0280010196.01.T01 MTR_2g085330 96.880 609 19 0 33 641 1 609 0.0 1183
MsG0280010196.01.T01 MTR_4g132200 76.325 604 133 2 48 641 3 606 0.0 856
MsG0280010196.01.T01 MTR_2g090520 30.088 339 195 4 112 413 38 371 5.63e-32 128
MsG0280010196.01.T01 MTR_2g090520 35.326 184 118 1 231 413 45 228 3.22e-27 111
MsG0280010196.01.T01 MTR_1g035040 25.719 591 344 16 115 636 712 1276 5.74e-27 117
MsG0280010196.01.T01 MTR_0370s0010 30.748 361 171 11 108 415 11 345 1.40e-25 108
MsG0280010196.01.T01 MTR_2g090525 35.366 164 106 0 252 415 47 210 2.58e-24 102
MsG0280010196.01.T01 MTR_2g090525 35.366 164 106 0 252 415 48 211 3.42e-24 101
MsG0280010196.01.T01 MTR_2g090525 35.366 164 106 0 252 415 121 284 1.66e-23 101
MsG0280010196.01.T01 MTR_2g090520 26.923 312 185 5 112 385 38 344 5.27e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010196.01.T01 AT4G27500 51.545 615 259 14 33 626 1 597 2.14e-158 469
MsG0280010196.01.T01 AT4G27500 52.183 504 205 14 33 515 1 489 6.99e-151 447
MsG0280010196.01.T01 AT3G15340 35.754 537 321 7 94 621 49 570 1.03e-61 216
MsG0280010196.01.T01 AT3G15340 35.754 537 321 7 94 621 49 570 1.03e-61 216
MsG0280010196.01.T01 AT5G36780 34.053 602 324 12 39 621 10 557 1.72e-61 215
MsG0280010196.01.T01 AT5G36690 34.053 602 324 12 39 621 10 557 1.72e-61 215
MsG0280010196.01.T01 AT3G15340 35.683 454 269 6 177 621 11 450 4.42e-47 173
MsG0280010196.01.T01 AT1G53110 36.857 350 177 6 280 622 107 419 6.57e-47 172
MsG0280010196.01.T01 AT1G20970 27.731 595 336 17 115 638 784 1355 1.60e-26 116

Find 187 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCAATTTGCTTGATTT+TGG 0.111540 2:+66041345 None:intergenic
TTCATCTCTTTCAACTTTGC+TGG 0.226290 2:+66039950 None:intergenic
CAAATCCCTCCCTTTGGATT+TGG 0.231361 2:+66040048 None:intergenic
AACTTTGCTGGATCAATTTC+AGG 0.232710 2:+66039962 None:intergenic
CATTCTTCAGCAACATCTTT+CGG 0.267373 2:+66042802 None:intergenic
CTGCAGCTTCCTGTTCCTCC+TGG 0.270073 2:+66039346 None:intergenic
AGCAACATCTTTCGGGGTAT+TGG 0.273346 2:+66042810 None:intergenic
CAGATCAATCTTAGCTTTGA+TGG 0.282733 2:+66042717 None:intergenic
TTGTTCAGATTTCATGTTAC+TGG 0.282809 2:-66038887 MsG0280010196.01.T01:three_prime_UTR
CTTGGTCCTCATTGCAGAAT+TGG 0.291841 2:+66041585 None:intergenic
TTCCGCTTCAGGATAGCTTT+TGG 0.293390 2:+66039198 None:intergenic
ATTCTTCAGCAACATCTTTC+GGG 0.294393 2:+66042803 None:intergenic
TGGTTTCACAGCCTCCTTCT+AGG 0.301267 2:+66039076 None:intergenic
TTCTGTTCTTATACATCCTT+AGG 0.306788 2:-66039009 MsG0280010196.01.T01:three_prime_UTR
GCAGCTTATAGGTGGGGATT+TGG 0.308350 2:-66041401 MsG0280010196.01.T01:intron
GGGACGGGCGCATGAGGAAC+TGG 0.314104 2:-66040201 MsG0280010196.01.T01:CDS
TAATCATGTGGTAGGTTTGA+TGG 0.332776 2:-66038721 MsG0280010196.01.T01:three_prime_UTR
AAAAGCTATATACACTAGTT+TGG 0.333433 2:-66038928 MsG0280010196.01.T01:three_prime_UTR
TCAGGCTCAGCAGCAGGTTT+CGG 0.348196 2:+66040154 None:intergenic
TAGCCATCCATTAGGAAGAT+TGG 0.350760 2:+66039056 None:intergenic
TTGCTAATCCTGATGCTGTT+GGG 0.354733 2:-66039135 MsG0280010196.01.T01:CDS
CCTCAAGCTGTTTGATTTCA+CGG 0.356491 2:+66041629 None:intergenic
AGTCCAACAATGACTTGCTT+TGG 0.356615 2:-66039173 MsG0280010196.01.T01:CDS
TGCAGCTTCCTGTTCCTCCT+GGG 0.369455 2:+66039347 None:intergenic
CCAGTCTCTGCAGGCAGAAC+TGG 0.373633 2:-66041296 MsG0280010196.01.T01:CDS
GACAGGAGCAAAAGCACAAC+AGG 0.373835 2:+66038959 None:intergenic
ATCTTACCTTAACCTGGTCT+TGG 0.385997 2:+66041530 None:intergenic
TGAGCCTCTGCAGCAGGCAC+TGG 0.386505 2:-66041906 MsG0280010196.01.T01:CDS
TCCATGTGAGCCAAACTTGA+TGG 0.386789 2:+66042873 None:intergenic
CAATCAAATTATAGTGCTAT+TGG 0.387927 2:+66038627 None:intergenic
ACCAAGTTGCATGATACTAT+TGG 0.389606 2:-66041568 MsG0280010196.01.T01:CDS
TGAAACTTTGCCAGCTCAAA+AGG 0.391668 2:-66040074 MsG0280010196.01.T01:CDS
CAAATCCAAAGGGAGGGATT+TGG 0.392397 2:-66040047 MsG0280010196.01.T01:CDS
TGCCACTCCCCAGGAGGAAC+AGG 0.395697 2:-66039355 MsG0280010196.01.T01:CDS
ACTTTACAGAATTCAATTGT+TGG 0.400332 2:-66038803 MsG0280010196.01.T01:three_prime_UTR
TGCTGCCAAATCCCTCCCTT+TGG 0.402163 2:+66040042 None:intergenic
TGTACGACTTTGGTAGAAAT+AGG 0.407755 2:+66040546 None:intergenic
TGAGCTGGCAAAGTTTCAAC+TGG 0.408310 2:+66040079 None:intergenic
GTTTGAACACCCTTGGTTGT+AGG 0.409345 2:+66045216 None:intergenic
CCAGTTCTGCCTGCAGAGAC+TGG 0.413245 2:+66041296 None:intergenic
TGGAAAGCCGGAGAAAGATC+TGG 0.414800 2:-66042908 MsG0280010196.01.T01:CDS
CTTGCTAATCCTGATGCTGT+TGG 0.420732 2:-66039136 MsG0280010196.01.T01:CDS
AAGAAAGCAAAGAAGAAGTC+TGG 0.421019 2:-66039384 MsG0280010196.01.T01:CDS
GAAGGCTTAGGCGCTTCCTT+TGG 0.421567 2:+66040103 None:intergenic
AGCTATGTCGGTTGAGGTTG+TGG 0.422235 2:-66043004 MsG0280010196.01.T01:CDS
TGGTCTTGGATGGTATCTTT+CGG 0.424912 2:+66041544 None:intergenic
TAAAGAAGTTTAGTCCTAGA+AGG 0.426550 2:-66039090 MsG0280010196.01.T01:three_prime_UTR
TTTCCCAGTGCCTGCTGCAG+AGG 0.426953 2:+66041902 None:intergenic
CCTTGGTTGTAGGGTTTATG+TGG 0.429519 2:+66045226 None:intergenic
TACAACCAAGGGTGTTCAAA+CGG 0.431359 2:-66045214 MsG0280010196.01.T01:CDS
TCTGTTCTTATACATCCTTA+GGG 0.435729 2:-66039008 MsG0280010196.01.T01:three_prime_UTR
GCTGGTGAGACCATCAAGTT+TGG 0.437796 2:-66042883 MsG0280010196.01.T01:CDS
CCAAGTTGCATGATACTATT+GGG 0.439438 2:-66041567 MsG0280010196.01.T01:CDS
CATAAACCTAGCCATCCATT+AGG 0.443866 2:+66039048 None:intergenic
TGTGAAACCAATCTTCCTAA+TGG 0.451800 2:-66039063 MsG0280010196.01.T01:three_prime_UTR
ATGCAAGCCCCAACAGCATC+AGG 0.452109 2:+66039127 None:intergenic
TTTGAACACCCTTGGTTGTA+GGG 0.453865 2:+66045217 None:intergenic
AGCAGCCAGCTCACGTGCCT+TGG 0.460860 2:+66040516 None:intergenic
TGGAGCTGCTGCCACTCCCC+AGG 0.461464 2:-66039364 MsG0280010196.01.T01:CDS
GTTACTCTTGAAAAGGAGAA+TGG 0.465649 2:-66042928 MsG0280010196.01.T01:CDS
TGGATATGAGGCAGCTGAGT+AGG 0.465768 2:-66040222 MsG0280010196.01.T01:CDS
TTTCATGTTACTGGAAGGTT+CGG 0.466275 2:-66038878 MsG0280010196.01.T01:three_prime_UTR
ACCATCAAGTTTGGCTCACA+TGG 0.470558 2:-66042874 MsG0280010196.01.T01:CDS
TGCTAATCCTGATGCTGTTG+GGG 0.471387 2:-66039134 MsG0280010196.01.T01:CDS
CAAACCTGTTACTCTTGAAA+AGG 0.471576 2:-66042935 MsG0280010196.01.T01:CDS
CCCAATAGTATCATGCAACT+TGG 0.473579 2:+66041567 None:intergenic
CAAATAATGCTGGTCGAGGC+GGG 0.474236 2:-66041868 MsG0280010196.01.T01:CDS
AGATTCTAAGAGAGGACAAC+AGG 0.475720 2:-66041967 MsG0280010196.01.T01:CDS
ACAACCAAGGGTGTTCAAAC+GGG 0.476160 2:-66045213 MsG0280010196.01.T01:intron
TGAAAATTTAATCATGTGGT+AGG 0.476281 2:-66038729 MsG0280010196.01.T01:three_prime_UTR
GTTACCCGTTTGAACACCCT+TGG 0.476624 2:+66045209 None:intergenic
TTCCTGTTCCTCCTGGGGAG+TGG 0.477279 2:+66039353 None:intergenic
TAAGATTGATCTGCTTGATA+AGG 0.478327 2:-66042707 MsG0280010196.01.T01:CDS
CGAGGCAACTGAACAAGAAA+AGG 0.479203 2:-66039319 MsG0280010196.01.T01:CDS
AGTCCAAAGCAAGTCATTGT+TGG 0.480935 2:+66039170 None:intergenic
AGCAGCTCTCAAAGCACAAA+AGG 0.480940 2:-66039852 MsG0280010196.01.T01:CDS
CCAATGGATAACGGTGTTGA+AGG 0.480966 2:-66042961 MsG0280010196.01.T01:CDS
GGAGATTGAGCCTCTGCAGC+AGG 0.481162 2:-66041912 MsG0280010196.01.T01:CDS
CGAAAGATGTTGCTGAAGAA+TGG 0.485859 2:-66042801 MsG0280010196.01.T01:CDS
TCTGACCAAGGCACGTGAGC+TGG 0.488490 2:-66040521 MsG0280010196.01.T01:CDS
AATGGATGGCTAGGTTTATG+AGG 0.490153 2:-66039045 MsG0280010196.01.T01:three_prime_UTR
TGGAGTGAAGAAAGAGAGAC+AGG 0.490509 2:-66041377 MsG0280010196.01.T01:CDS
GTGGGATTCGAGATGGTTCA+AGG 0.491500 2:-66042985 MsG0280010196.01.T01:CDS
TACCATCCAAGACCAGGTTA+AGG 0.491989 2:-66041536 MsG0280010196.01.T01:intron
TCACAAAGGAAAGCAGTGTC+AGG 0.492731 2:-66039254 MsG0280010196.01.T01:CDS
AACAATGACTTGCTTTGGAC+TGG 0.494249 2:-66039168 MsG0280010196.01.T01:CDS
GAAAGAGATGAAAAGAGAAG+AGG 0.494570 2:-66039939 MsG0280010196.01.T01:CDS
GGAAGCTGAGAAGAAACTTA+AGG 0.497358 2:-66039831 MsG0280010196.01.T01:intron
AATCTTCCTAATGGATGGCT+AGG 0.498518 2:-66039054 MsG0280010196.01.T01:three_prime_UTR
GGCAAAGTTTCAACTGGAGA+AGG 0.502305 2:+66040085 None:intergenic
CTGGGATGAAAAGCCACTGC+TGG 0.503793 2:-66040182 MsG0280010196.01.T01:CDS
TCAATCTTAGCTTTGATGGA+TGG 0.508062 2:+66042721 None:intergenic
TTGATGGATGGATCGTCATA+AGG 0.508832 2:+66042733 None:intergenic
GAGCCTCTGCAGCAGGCACT+GGG 0.509435 2:-66041905 MsG0280010196.01.T01:CDS
CTGAGGAAACAGCGTGATGA+GGG 0.509593 2:-66041226 MsG0280010196.01.T01:CDS
AGAAAGAGAGACAGGCGATT+CGG 0.510994 2:-66041369 MsG0280010196.01.T01:CDS
GTGAGAAATTCATGTCACTT+TGG 0.511048 2:-66040297 MsG0280010196.01.T01:CDS
CCCTGCCCCAGTGAAGGAAA+AGG 0.514924 2:-66039277 MsG0280010196.01.T01:CDS
CTGAAGCGCTGAAGGCAAAG+AGG 0.515275 2:-66042648 MsG0280010196.01.T01:CDS
AATGCCTCAGGCTCAGCAGC+AGG 0.515492 2:+66040148 None:intergenic
CGTGAAATCAAACAGCTTGA+GGG 0.518878 2:-66041628 MsG0280010196.01.T01:CDS
TCAAACAGCTTGAGGGGACA+AGG 0.528670 2:-66041621 MsG0280010196.01.T01:CDS
GAATGAATCTGCTTAGGTGC+AGG 0.530702 2:+66042778 None:intergenic
GGATATGAGGCAGCTGAGTA+GGG 0.531918 2:-66040221 MsG0280010196.01.T01:CDS
AAGCAAAGCTTGCTGCTGAA+AGG 0.532045 2:-66039907 MsG0280010196.01.T01:CDS
TCAGATTAAGATTCTAAGAG+AGG 0.532456 2:-66041975 MsG0280010196.01.T01:CDS
TGAGGTTGTGGGATTCGAGA+TGG 0.533216 2:-66042992 MsG0280010196.01.T01:CDS
CATCGATATCCAGTCTCTGC+AGG 0.533427 2:-66041305 MsG0280010196.01.T01:CDS
TACCTTAACCTGGTCTTGGA+TGG 0.533508 2:+66041534 None:intergenic
GCTATGTCGGTTGAGGTTGT+GGG 0.536778 2:-66043003 MsG0280010196.01.T01:CDS
TGGTCAGAAGTGTACGACTT+TGG 0.536978 2:+66040536 None:intergenic
TTCTCAACTCAATTCCCCTA+AGG 0.537951 2:+66038993 None:intergenic
GAATTCTGTAAAGTATATCA+TGG 0.538479 2:+66038812 None:intergenic
CCTTCAACACCGTTATCCAT+TGG 0.538584 2:+66042961 None:intergenic
TTTCTTGCAGCTTATAGGTG+GGG 0.542002 2:-66041407 MsG0280010196.01.T01:intron
CTTATAGGTGGGGATTTGGA+TGG 0.542716 2:-66041397 MsG0280010196.01.T01:CDS
TCAAATAATGCTGGTCGAGG+CGG 0.544937 2:-66041869 MsG0280010196.01.T01:CDS
TCAGATCACTGAAGCGCTGA+AGG 0.551190 2:-66042656 MsG0280010196.01.T01:CDS
AGTTGGAGCTATGTCGGTTG+AGG 0.551195 2:-66043010 MsG0280010196.01.T01:CDS
GGCTTGAAAATTTAATCATG+TGG 0.552485 2:-66038733 MsG0280010196.01.T01:three_prime_UTR
CCACATAAACCCTACAACCA+AGG 0.552984 2:-66045226 MsG0280010196.01.T01:CDS
AAACCAATCTTCCTAATGGA+TGG 0.553782 2:-66039059 MsG0280010196.01.T01:three_prime_UTR
CTGCGCAATTCAAATAATGC+TGG 0.554404 2:-66041878 MsG0280010196.01.T01:CDS
CCGGAGAAAGATCTGGGAGC+TGG 0.555365 2:-66042901 MsG0280010196.01.T01:CDS
GCAGCTTCCTGTTCCTCCTG+GGG 0.556632 2:+66039348 None:intergenic
TGAAAAGGAGAATGGAAAGC+CGG 0.556776 2:-66042920 MsG0280010196.01.T01:CDS
AAATATATCTTACCTTAACC+TGG 0.556878 2:+66041524 None:intergenic
GGACGGGCGCATGAGGAACT+GGG 0.558746 2:-66040200 MsG0280010196.01.T01:CDS
ATGAGGCAGCTGAGTAGGGA+CGG 0.559224 2:-66040217 MsG0280010196.01.T01:CDS
GCAGCAGGAGTGTCCTTGTG+AGG 0.562150 2:+66039992 None:intergenic
CAAATTATAGTGCTATTGGT+AGG 0.562443 2:+66038631 None:intergenic
TGAGGCAGCTGAGTAGGGAC+GGG 0.566320 2:-66040216 MsG0280010196.01.T01:CDS
TTGAGAGCATTCAGAAGCTG+AGG 0.567455 2:-66041243 MsG0280010196.01.T01:CDS
TGAGTAGGGACGGGCGCATG+AGG 0.567990 2:-66040207 MsG0280010196.01.T01:CDS
GGAAAGCCGGAGAAAGATCT+GGG 0.570246 2:-66042907 MsG0280010196.01.T01:CDS
GTTCAAGGACCAATGGATAA+CGG 0.571232 2:-66042970 MsG0280010196.01.T01:CDS
GTTTCAACTGGAGAAGGCTT+AGG 0.571402 2:+66040091 None:intergenic
TCAGATTTCATGTTACTGGA+AGG 0.571642 2:-66038883 MsG0280010196.01.T01:three_prime_UTR
ATCTGTCGCAAAACAGCCAA+AGG 0.571803 2:-66040119 MsG0280010196.01.T01:CDS
CCGTGAAATCAAACAGCTTG+AGG 0.572761 2:-66041629 MsG0280010196.01.T01:CDS
CCAGCTCCCAGATCTTTCTC+CGG 0.573247 2:+66042901 None:intergenic
TGAAGCGCTGAAGGCAAAGA+GGG 0.576662 2:-66042647 MsG0280010196.01.T01:intron
AAAAGGAAACCAAATCCAAA+GGG 0.578316 2:-66040057 MsG0280010196.01.T01:CDS
AAGCCGAGCAAAAGCACCAG+AGG 0.579229 2:-66039226 MsG0280010196.01.T01:CDS
CACATAAACCCTACAACCAA+GGG 0.579899 2:-66045225 MsG0280010196.01.T01:CDS
ACAGGAAGCTGCAGAAGTCG+AGG 0.581398 2:-66039337 MsG0280010196.01.T01:CDS
CAAAAGGAAACCAAATCCAA+AGG 0.582095 2:-66040058 MsG0280010196.01.T01:CDS
GAAACCTGCTGCTGAGCCTG+AGG 0.583413 2:-66040152 MsG0280010196.01.T01:CDS
TGAGGCCCCTGCCCCAGTGA+AGG 0.584600 2:-66039283 MsG0280010196.01.T01:CDS
AATTCAAATAATGCTGGTCG+AGG 0.585603 2:-66041872 MsG0280010196.01.T01:CDS
CTATGAGAAGTTGAATCACA+TGG 0.586920 2:-66038754 MsG0280010196.01.T01:three_prime_UTR
TGGTAGCTGTTACTCAGAAG+AGG 0.587998 2:-66041276 MsG0280010196.01.T01:CDS
CGAGATGGTTCAAGGACCAA+TGG 0.588098 2:-66042977 MsG0280010196.01.T01:CDS
TTCCAAAAGCTATCCTGAAG+CGG 0.593143 2:-66039200 MsG0280010196.01.T01:CDS
GCTGAGGAAACAGCGTGATG+AGG 0.596421 2:-66041227 MsG0280010196.01.T01:CDS
GGTTTCGGTTCTTCCAGCAG+TGG 0.599116 2:+66040169 None:intergenic
TTCTTCAGCAACATCTTTCG+GGG 0.600013 2:+66042804 None:intergenic
CTGTTCTTATACATCCTTAG+GGG 0.600362 2:-66039007 MsG0280010196.01.T01:three_prime_UTR
AGGCGGGATCTTCTCATCTG+AGG 0.600540 2:-66041852 MsG0280010196.01.T01:CDS
TGGAGATGAATCTGCGAAAG+CGG 0.602362 2:-66042854 MsG0280010196.01.T01:CDS
GGCAACTGAACAAGAAAAGG+TGG 0.602981 2:-66039316 MsG0280010196.01.T01:CDS
GATCGTCATAAGGCCTGCAT+CGG 0.604055 2:+66042743 None:intergenic
AGACTGGATATCGATGTCAA+TGG 0.604869 2:+66041312 None:intergenic
AAATTCATGTCACTTTGGAA+CGG 0.608700 2:-66040292 MsG0280010196.01.T01:CDS
CGGGATCTTCTCATCTGAGG+AGG 0.610247 2:-66041849 MsG0280010196.01.T01:CDS
TGATGAACTTTCACAGACAG+AGG 0.613362 2:-66040473 MsG0280010196.01.T01:intron
GGAAACCAAATCCAAAGGGA+GGG 0.616930 2:-66040053 MsG0280010196.01.T01:CDS
GAAAGATACCATCCAAGACC+AGG 0.617247 2:-66041542 MsG0280010196.01.T01:CDS
AACAAACGCGAAATACAGAC+GGG 0.620331 2:+66038688 None:intergenic
TGCTGAAAGGAAGAAGAAGA+TGG 0.626148 2:-66039894 MsG0280010196.01.T01:CDS
TTCATGTCACTTTGGAACGG+CGG 0.628904 2:-66040289 MsG0280010196.01.T01:CDS
AGGAAACCAAATCCAAAGGG+AGG 0.629120 2:-66040054 MsG0280010196.01.T01:CDS
AGCTGCTGCCACTCCCCAGG+AGG 0.630145 2:-66039361 MsG0280010196.01.T01:CDS
GAACAAACGCGAAATACAGA+CGG 0.631775 2:+66038687 None:intergenic
GTGAAATCAAACAGCTTGAG+GGG 0.632326 2:-66041627 MsG0280010196.01.T01:CDS
GGTAGCTGTTACTCAGAAGA+GGG 0.632685 2:-66041275 MsG0280010196.01.T01:CDS
CAAACAGCTTGAGGGGACAA+GGG 0.634784 2:-66041620 MsG0280010196.01.T01:CDS
AGAAGTTTAGTCCTAGAAGG+AGG 0.638081 2:-66039087 MsG0280010196.01.T01:three_prime_UTR
GAGGAAACAGCGTGATGAGG+GGG 0.638113 2:-66041224 MsG0280010196.01.T01:intron
TGAATTTGAAAATCCTCACA+AGG 0.649669 2:-66040005 MsG0280010196.01.T01:CDS
TGAGGAAACAGCGTGATGAG+GGG 0.650058 2:-66041225 MsG0280010196.01.T01:CDS
AAAGGTGGATGATGTTGTTG+AGG 0.661248 2:-66039301 MsG0280010196.01.T01:CDS
AAGTCGTACACTTCTGACCA+AGG 0.666972 2:-66040533 MsG0280010196.01.T01:CDS
GAATGCTCTCGTGCTGAATG+CGG 0.668048 2:+66041677 None:intergenic
AGTGAAGGAAAAGGTCACAA+AGG 0.676979 2:-66039268 MsG0280010196.01.T01:CDS
TCATTGCCAATTCTGCAATG+AGG 0.677058 2:-66041591 MsG0280010196.01.T01:CDS
CAAGCTGTTTGATTTCACGG+AGG 0.715767 2:+66041632 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTATTTATTTTTATT+TGG - Chr2:66040846-66040865 MsG0280010196.01.T01:intron 0.0%
!! AATAAAATATTAAATTGCTA+CGG + Chr2:66041417-66041436 None:intergenic 10.0%
!! ATTTATATATGAACAAAAAA+AGG + Chr2:66039783-66039802 None:intergenic 10.0%
!! CAAAATTAAAAACTTTATAA+AGG + Chr2:66040161-66040180 None:intergenic 10.0%
!!! TTTTTTTCAAATTTATGTAT+GGG - Chr2:66042896-66042915 MsG0280010196.01.T01:CDS 10.0%
!! AAACTAAAAATGTTTGTAAT+TGG - Chr2:66044349-66044368 MsG0280010196.01.T01:intron 15.0%
!! AATATTGAAAATTAATGCAA+AGG - Chr2:66041470-66041489 MsG0280010196.01.T01:intron 15.0%
!! ACAAAATAAAAAACTTCATA+AGG + Chr2:66040333-66040352 None:intergenic 15.0%
!! AGTAAAATAGTTTGATATTT+AGG + Chr2:66041334-66041353 None:intergenic 15.0%
!! ATAAATTGTTTATCCAAATA+AGG - Chr2:66044408-66044427 MsG0280010196.01.T01:intron 15.0%
!! ATATTGAAAATTAATGCAAA+GGG - Chr2:66041471-66041490 MsG0280010196.01.T01:intron 15.0%
!! CAAAATAAAAAACTTCATAA+GGG + Chr2:66040332-66040351 None:intergenic 15.0%
!! GTAAAATAGTTTGATATTTA+GGG + Chr2:66041333-66041352 None:intergenic 15.0%
!! TAAAATGAAATGAATAAATG+AGG + Chr2:66039638-66039657 None:intergenic 15.0%
!! TCTTATTATAATTGCATATT+TGG - Chr2:66041861-66041880 MsG0280010196.01.T01:CDS 15.0%
!!! AAAAGTTCCTTTTTTTTAAA+AGG + Chr2:66041810-66041829 None:intergenic 15.0%
!!! AAAATCAAACAGAAAATTTT+AGG + Chr2:66043121-66043140 None:intergenic 15.0%
!!! ATTACAAACATTTTTAGTTT+AGG + Chr2:66044349-66044368 None:intergenic 15.0%
!!! ATTTATTTTTATTTGGATTC+AGG - Chr2:66040853-66040872 MsG0280010196.01.T01:intron 15.0%
!!! ATTTGATTGTAAATTTTTTC+TGG - Chr2:66042798-66042817 MsG0280010196.01.T01:CDS 15.0%
!!! CTTTTTTTCAAATTTATGTA+TGG - Chr2:66042895-66042914 MsG0280010196.01.T01:CDS 15.0%
!!! TTACAAACATTTTTAGTTTA+GGG + Chr2:66044348-66044367 None:intergenic 15.0%
!!! TTGTGATATAGTTAAATTTT+CGG - Chr2:66045051-66045070 MsG0280010196.01.T01:intron 15.0%
!!! TTTTTCTCCTTTTAAAAAAA+AGG - Chr2:66041800-66041819 MsG0280010196.01.T01:intron 15.0%
!! AAAAACCCAAAATTGAAAAA+TGG + Chr2:66039929-66039948 None:intergenic 20.0%
!! AAAAATCTTCAAATAGTTGA+AGG + Chr2:66044317-66044336 None:intergenic 20.0%
!! AAAACCCAAAATTGAAAAAT+GGG + Chr2:66039928-66039947 None:intergenic 20.0%
!! AGATGAAAATGTAAAACTAA+GGG + Chr2:66042933-66042952 None:intergenic 20.0%
!! AGGTAATTTAATTCTTGATT+TGG - Chr2:66044090-66044109 MsG0280010196.01.T01:intron 20.0%
!! AGTTCGATTAAGTAATTATA+CGG + Chr2:66038940-66038959 None:intergenic 20.0%
!! ATTATATATCTCAATGGAAT+AGG + Chr2:66044462-66044481 None:intergenic 20.0%
!! ATTTGATATGATATTGAGAA+AGG + Chr2:66038901-66038920 None:intergenic 20.0%
!! CTAAATCCATAAAGATATTA+CGG + Chr2:66044238-66044257 None:intergenic 20.0%
!! GAAAAAAAAGGTAACAAATT+AGG - Chr2:66044290-66044309 MsG0280010196.01.T01:intron 20.0%
!! GATATATAATTTCCAAAATC+TGG - Chr2:66044472-66044491 MsG0280010196.01.T01:intron 20.0%
!! GTCATATTCAGAAATTAATT+TGG + Chr2:66043312-66043331 None:intergenic 20.0%
!! TAAAAATGAAGAAAACACAA+AGG - Chr2:66039563-66039582 MsG0280010196.01.T01:intron 20.0%
!! TTGGAAATTATATATCTCAA+TGG + Chr2:66044468-66044487 None:intergenic 20.0%
!! TTGGATAAACAATTTATTCA+AGG + Chr2:66044405-66044424 None:intergenic 20.0%
!!! AAAAGGATAATGATTTTTTC+AGG + Chr2:66039766-66039785 None:intergenic 20.0%
!!! AAATGAATAAATGAGGTTTT+GGG + Chr2:66039631-66039650 None:intergenic 20.0%
!!! AATGATTTTGTTGTTGTATT+TGG + Chr2:66039415-66039434 None:intergenic 20.0%
!!! AATTAGTGTAATTTGTAATG+AGG - Chr2:66044379-66044398 MsG0280010196.01.T01:intron 20.0%
!!! ACATTTTTAGGTGAATTTTT+AGG + Chr2:66039214-66039233 None:intergenic 20.0%
!!! ATGAATAAACTTTTGAAAGA+TGG - Chr2:66042961-66042980 MsG0280010196.01.T01:CDS 20.0%
!!! ATGTTGATTTGTTGTATATA+TGG - Chr2:66040628-66040647 MsG0280010196.01.T01:intron 20.0%
!!! ATTTTACCGTAATATCTTTA+TGG - Chr2:66044229-66044248 MsG0280010196.01.T01:intron 20.0%
!!! CATAAACTCTTTTTTTGATT+TGG - Chr2:66039950-66039969 MsG0280010196.01.T01:CDS 20.0%
!!! CTATTTGAAGATTTTTAAGT+AGG - Chr2:66044321-66044340 MsG0280010196.01.T01:intron 20.0%
!!! GAAATATTATGTGGATTTTT+TGG + Chr2:66039029-66039048 None:intergenic 20.0%
!!! GTTTTTAATTTTGCTTTGTT+TGG - Chr2:66040168-66040187 MsG0280010196.01.T01:CDS 20.0%
!!! TATTTTACTTGTTATTACTG+TGG - Chr2:66041345-66041364 MsG0280010196.01.T01:CDS 20.0%
!!! TCTGAATTGTGATTTTTTTT+TGG - Chr2:66040479-66040498 MsG0280010196.01.T01:CDS 20.0%
!!! TGTTTTTGTTAATCATTGAT+GGG - Chr2:66040104-66040123 MsG0280010196.01.T01:CDS 20.0%
!!! TTGCTTATTTATTTGAGATT+TGG - Chr2:66040358-66040377 MsG0280010196.01.T01:intron 20.0%
!!! TTGTATTTGGAAACATTTTT+AGG + Chr2:66039402-66039421 None:intergenic 20.0%
!!! TTGTTTTTGGAAACATTTTT+AGG + Chr2:66039226-66039245 None:intergenic 20.0%
!!! TTGTTTTTGTTAATCATTGA+TGG - Chr2:66040103-66040122 MsG0280010196.01.T01:CDS 20.0%
!!! TTTGTGTTTTCTTCATTTTT+AGG + Chr2:66039564-66039583 None:intergenic 20.0%
!!! TTTTTTGTAAGTTTTGCTAT+TGG - Chr2:66042398-66042417 MsG0280010196.01.T01:intron 20.0%
! AAAAGCTATATACACTAGTT+TGG - Chr2:66044973-66044992 MsG0280010196.01.T01:intron 25.0%
! AAATATATCTTACCTTAACC+TGG + Chr2:66042380-66042399 None:intergenic 25.0%
! AACCTGTAAAATTAGTTCAA+AGG - Chr2:66041606-66041625 MsG0280010196.01.T01:CDS 25.0%
! ACTATTAGTCAGATTAAATG+TGG + Chr2:66043088-66043107 None:intergenic 25.0%
! ACTTTACAGAATTCAATTGT+TGG - Chr2:66045098-66045117 MsG0280010196.01.T01:intron 25.0%
! AGATACTAAATCATGAATCA+CGG + Chr2:66040747-66040766 None:intergenic 25.0%
! AGGTTTGATTAGATAATTGT+AGG + Chr2:66039165-66039184 None:intergenic 25.0%
! AGTTTGATCGTAATTGAATA+AGG - Chr2:66040394-66040413 MsG0280010196.01.T01:intron 25.0%
! CAAGAAAATTGAACATGTAA+AGG + Chr2:66042481-66042500 None:intergenic 25.0%
! CCACATAAATATTCATTCTT+CGG - Chr2:66043460-66043479 MsG0280010196.01.T01:intron 25.0%
! CGAAGAATGAATATTTATGT+GGG + Chr2:66043462-66043481 None:intergenic 25.0%
! GAATTCTGTAAAGTATATCA+TGG + Chr2:66045092-66045111 None:intergenic 25.0%
! GAGATGAAAATGTAAAACTA+AGG + Chr2:66042934-66042953 None:intergenic 25.0%
! GGTTTGATTAGATAATTGTA+GGG + Chr2:66039164-66039183 None:intergenic 25.0%
! TAAAAAGAATGAATCTGCTT+AGG + Chr2:66041132-66041151 None:intergenic 25.0%
! TAGTAGAAATTTGCAGTTAA+TGG + Chr2:66039518-66039537 None:intergenic 25.0%
! TATATCTTTCTCTCTCTAAA+CGG - Chr2:66039847-66039866 MsG0280010196.01.T01:CDS 25.0%
! TCTGTATAATACCAGATAAT+CGG - Chr2:66039316-66039335 MsG0280010196.01.T01:CDS 25.0%
! TGAAAATTTAATCATGTGGT+AGG - Chr2:66045172-66045191 MsG0280010196.01.T01:intron 25.0%
! TTATATCTACATTAACTCGA+TGG + Chr2:66041373-66041392 None:intergenic 25.0%
! TTCACTTACTAAAATGTACA+AGG + Chr2:66039455-66039474 None:intergenic 25.0%
! TTGAACAATAAAACCCTTAA+AGG - Chr2:66041683-66041702 MsG0280010196.01.T01:CDS 25.0%
!! CTTTTATGGATACAGATATA+TGG - Chr2:66042192-66042211 MsG0280010196.01.T01:intron 25.0%
!! GAAATGAATAAATGAGGTTT+TGG + Chr2:66039632-66039651 None:intergenic 25.0%
!! GAATGAGTTTTTATTGCTTT+TGG + Chr2:66039051-66039070 None:intergenic 25.0%
!! TACAAAACAATTCCAGATTT+TGG + Chr2:66044487-66044506 None:intergenic 25.0%
!! TCTTTTTGATGAGAAAATGA+AGG - Chr2:66041968-66041987 MsG0280010196.01.T01:CDS 25.0%
!! TGATATAGTTAAATTTTCGG+CGG - Chr2:66045054-66045073 MsG0280010196.01.T01:intron 25.0%
!! TTCAGTTTTGCATTAACAAT+TGG - Chr2:66045234-66045253 MsG0280010196.01.T01:CDS 25.0%
!! TTTGCAGTTAATGGAATTTT+AGG + Chr2:66039509-66039528 None:intergenic 25.0%
!! TTTGTGGATTTTCTTCATTT+GGG + Chr2:66039669-66039688 None:intergenic 25.0%
!! TTTTCTTCATTTGGGTAAAA+AGG + Chr2:66039661-66039680 None:intergenic 25.0%
!! TTTTGTGGATTTTCTTCATT+TGG + Chr2:66039670-66039689 None:intergenic 25.0%
!!! AAAATCTGGAATTGTTTTGT+AGG - Chr2:66044486-66044505 MsG0280010196.01.T01:intron 25.0%
!!! AACCTTTTTGAGTATCAAAT+CGG - Chr2:66038970-66038989 MsG0280010196.01.T01:three_prime_UTR 25.0%
!!! ATCATCAATTTGCTTGATTT+TGG + Chr2:66042559-66042578 None:intergenic 25.0%
!!! ATTTGGAAACATTTTTAGGT+AGG + Chr2:66039398-66039417 None:intergenic 25.0%
!!! ATTTTTAGGTAGGTAGTTAT+AGG + Chr2:66039200-66039219 None:intergenic 25.0%
!!! TGGTTATTTTTTCTGAGATT+TGG - Chr2:66040188-66040207 MsG0280010196.01.T01:CDS 25.0%
!!! TTAGGTATTGTATTGACTTT+TGG + Chr2:66039491-66039510 None:intergenic 25.0%
!!! TTCTTCATTTTTAGGTTGAA+TGG + Chr2:66039556-66039575 None:intergenic 25.0%
!!! TTGCTTTTGGAAATATTATG+TGG + Chr2:66039038-66039057 None:intergenic 25.0%
!!! TTGTTACCTTTTTTTTCCTA+TGG + Chr2:66044287-66044306 None:intergenic 25.0%
!!! TTTTAGGTGAATTTTTAGGT+AGG + Chr2:66039210-66039229 None:intergenic 25.0%
!!! TTTTTAGGTAGGTAGTTATA+GGG + Chr2:66039199-66039218 None:intergenic 25.0%
!!! TTTTTTGATGTCATGTGATA+TGG - Chr2:66040542-66040561 MsG0280010196.01.T01:CDS 25.0%
!!! TTTTTTGGTAGTTAGTTATG+TGG + Chr2:66039014-66039033 None:intergenic 25.0%
AAAAGGAAACCAAATCCAAA+GGG - Chr2:66043844-66043863 MsG0280010196.01.T01:intron 30.0%
ACTAAAACACAAGTAAAGTG+AGG + Chr2:66042131-66042150 None:intergenic 30.0%
ATATCTTTCTCTCTCTAAAC+GGG - Chr2:66039848-66039867 MsG0280010196.01.T01:CDS 30.0%
ATCAAGAATTACACATTGAC+GGG + Chr2:66043199-66043218 None:intergenic 30.0%
ATCTCAATGGAATAGGAAAA+TGG + Chr2:66044455-66044474 None:intergenic 30.0%
ATCTGGTATTATACAGAGAA+AGG + Chr2:66039313-66039332 None:intergenic 30.0%
CATCAAGAATTACACATTGA+CGG + Chr2:66043200-66043219 None:intergenic 30.0%
CCGAAGAATGAATATTTATG+TGG + Chr2:66043463-66043482 None:intergenic 30.0%
CTAAAACACAAGTAAAGTGA+GGG + Chr2:66042130-66042149 None:intergenic 30.0%
CTTCTATTCATCTGAAAATG+TGG - Chr2:66043007-66043026 MsG0280010196.01.T01:CDS 30.0%
GAAAGATGGAATACAAAATG+TGG - Chr2:66042975-66042994 MsG0280010196.01.T01:CDS 30.0%
GAGATTCATAACATACGAAA+TGG + Chr2:66042085-66042104 None:intergenic 30.0%
GATATGATATTGAGAAAGGT+CGG + Chr2:66038897-66038916 None:intergenic 30.0%
GATCGTAATTGAATAAGGTT+TGG - Chr2:66040399-66040418 MsG0280010196.01.T01:intron 30.0%
GATTAAATGTGGTATGATAC+TGG + Chr2:66043077-66043096 None:intergenic 30.0%
GGAAGATTTAAAAACAGACT+GGG + Chr2:66043045-66043064 None:intergenic 30.0%
GGCTTGAAAATTTAATCATG+TGG - Chr2:66045168-66045187 MsG0280010196.01.T01:intron 30.0%
GGTTCGATTAGATAATTGTA+GGG + Chr2:66039352-66039371 None:intergenic 30.0%
GGTTTGATCACAATTGAATA+AGG - Chr2:66040224-66040243 MsG0280010196.01.T01:CDS 30.0%
GTATGATACTGGATGAAAAT+TGG + Chr2:66043066-66043085 None:intergenic 30.0%
TAAAGAAGTTTAGTCCTAGA+AGG - Chr2:66044811-66044830 MsG0280010196.01.T01:intron 30.0%
TAAGATTGATCTGCTTGATA+AGG - Chr2:66041194-66041213 MsG0280010196.01.T01:intron 30.0%
TCAAATTTATGTATGGGATG+TGG - Chr2:66042902-66042921 MsG0280010196.01.T01:CDS 30.0%
TCTGTTCTTATACATCCTTA+GGG - Chr2:66044893-66044912 MsG0280010196.01.T01:intron 30.0%
TGAATTTGAAAATCCTCACA+AGG - Chr2:66043896-66043915 MsG0280010196.01.T01:intron 30.0%
TGGAAGATTTAAAAACAGAC+TGG + Chr2:66043046-66043065 None:intergenic 30.0%
TTCGAAACAGTAAAAACGTA+AGG + Chr2:66039713-66039732 None:intergenic 30.0%
TTCTGTTCTTATACATCCTT+AGG - Chr2:66044892-66044911 MsG0280010196.01.T01:intron 30.0%
TTGTTCAGATTTCATGTTAC+TGG - Chr2:66045014-66045033 MsG0280010196.01.T01:intron 30.0%
! AGATTTGGATTTTGCATGTT+GGG - Chr2:66040203-66040222 MsG0280010196.01.T01:CDS 30.0%
! ATCCGATTTGATACTCAAAA+AGG + Chr2:66038975-66038994 None:intergenic 30.0%
! ATTTTACAGGTTACATCTCA+AGG + Chr2:66041598-66041617 None:intergenic 30.0%
! CTCCTTTGAACTAATTTTAC+AGG + Chr2:66041611-66041630 None:intergenic 30.0%
! GAAAAGAATTTTGTCATCGT+TGG - Chr2:66043659-66043678 MsG0280010196.01.T01:intron 30.0%
! TATCCATAAAAGCATATCAG+TGG + Chr2:66042184-66042203 None:intergenic 30.0%
! TCAATTTTCTTGCAGCTTAT+AGG - Chr2:66042489-66042508 MsG0280010196.01.T01:intron 30.0%
! TCAGATTAAGATTCTAAGAG+AGG - Chr2:66041926-66041945 MsG0280010196.01.T01:CDS 30.0%
! TGAAAATGAGAAGGATTTTG+TGG + Chr2:66039249-66039268 None:intergenic 30.0%
! TTGCATGTTTGAGATTAAGA+TGG - Chr2:66040503-66040522 MsG0280010196.01.T01:CDS 30.0%
!! AAATTCATGTCACTTTGGAA+CGG - Chr2:66043609-66043628 MsG0280010196.01.T01:intron 30.0%
!! AAGGATTTTGTGGTTGTTTT+TGG + Chr2:66039239-66039258 None:intergenic 30.0%
!! ATTTGCTTTTCTTCAGTCAA+TGG + Chr2:66042249-66042268 None:intergenic 30.0%
!! CATTTTATGTTGGTTATCGA+TGG + Chr2:66038734-66038753 None:intergenic 30.0%
!! CTGACCCATTTTTCAATTTT+GGG - Chr2:66039921-66039940 MsG0280010196.01.T01:CDS 30.0%
!! TCTGACCCATTTTTCAATTT+TGG - Chr2:66039920-66039939 MsG0280010196.01.T01:CDS 30.0%
!!! ATAGCTTTTTTTCCAAAGAC+AGG + Chr2:66044962-66044981 None:intergenic 30.0%
!!! ATTGTATTGACTTTTGGCAA+TGG + Chr2:66039485-66039504 None:intergenic 30.0%
!!! CAATTGTTGGTTAGTTTTGA+TGG - Chr2:66045111-66045130 MsG0280010196.01.T01:intron 30.0%
!!! GGGTCAAATACTTTATTTTC+CGG - Chr2:66041491-66041510 MsG0280010196.01.T01:intron 30.0%
!!! GTTGTTTTCTCTTGTTTTTG+TGG + Chr2:66039685-66039704 None:intergenic 30.0%
!!! GTTTTGGGTTTTGCAATTTT+GGG + Chr2:66039616-66039635 None:intergenic 30.0%
!!! TCATTTTTAGGTTGAATGGA+AGG + Chr2:66039552-66039571 None:intergenic 30.0%
AAACCAATCTTCCTAATGGA+TGG - Chr2:66044842-66044861 MsG0280010196.01.T01:intron 35.0%
AACTTTGCTGGATCAATTTC+AGG + Chr2:66043942-66043961 None:intergenic 35.0%
AAGAAAGCAAAGAAGAAGTC+TGG - Chr2:66044517-66044536 MsG0280010196.01.T01:intron 35.0%
AATTCAAATAATGCTGGTCG+AGG - Chr2:66042029-66042048 MsG0280010196.01.T01:intron 35.0%
ACCAAGTTGCATGATACTAT+TGG - Chr2:66042333-66042352 MsG0280010196.01.T01:intron 35.0%
ACTCTATTGTCTAGTCTCAA+AGG - Chr2:66042730-66042749 MsG0280010196.01.T01:CDS 35.0%
AGACAAAAACGTGCCTTTAA+GGG + Chr2:66041699-66041718 None:intergenic 35.0%
AGATATAGAGAGAGAGAATG+AGG + Chr2:66039834-66039853 None:intergenic 35.0%
AGCTATCAAATAGTCAACGA+TGG - Chr2:66043483-66043502 MsG0280010196.01.T01:intron 35.0%
AGTTATAGGATTGAAGACGA+TGG + Chr2:66039374-66039393 None:intergenic 35.0%
ATTCTTCAGCAACATCTTTC+GGG + Chr2:66041101-66041120 None:intergenic 35.0%
CAAAAGGAAACCAAATCCAA+AGG - Chr2:66043843-66043862 MsG0280010196.01.T01:intron 35.0%
CAAACCTGTTACTCTTGAAA+AGG - Chr2:66040966-66040985 MsG0280010196.01.T01:intron 35.0%
CAGAGGGGAAAATTAGAAAA+AGG + Chr2:66043576-66043595 None:intergenic 35.0%
CATTCTTCAGCAACATCTTT+CGG + Chr2:66041102-66041121 None:intergenic 35.0%
CCAAGTTGCATGATACTATT+GGG - Chr2:66042334-66042353 MsG0280010196.01.T01:intron 35.0%
CTATGAGAAGTTGAATCACA+TGG - Chr2:66045147-66045166 MsG0280010196.01.T01:intron 35.0%
CTGTTCTTATACATCCTTAG+GGG - Chr2:66044894-66044913 MsG0280010196.01.T01:intron 35.0%
GAAAGAGATGAAAAGAGAAG+AGG - Chr2:66043962-66043981 MsG0280010196.01.T01:intron 35.0%
GACTCATCATTATTTGTGTC+AGG - Chr2:66044199-66044218 MsG0280010196.01.T01:intron 35.0%
GAGAAATCAGCAAAAAGAGA+TGG + Chr2:66043522-66043541 None:intergenic 35.0%
GAGTTCAGTGAGTCTATATA+AGG + Chr2:66039279-66039298 None:intergenic 35.0%
GCTATCAAATAGTCAACGAT+GGG - Chr2:66043484-66043503 MsG0280010196.01.T01:intron 35.0%
GGGTTCGATTAGATAATTGT+AGG + Chr2:66039353-66039372 None:intergenic 35.0%
GGTTGTGTTTGAAAATGAGA+AGG + Chr2:66039258-66039277 None:intergenic 35.0%
GTATCTGTTTATTGAGCATG+TGG - Chr2:66040769-66040788 MsG0280010196.01.T01:intron 35.0%
GTCATGCCATAGGAAAAAAA+AGG - Chr2:66044278-66044297 MsG0280010196.01.T01:intron 35.0%
GTTACTCTTGAAAAGGAGAA+TGG - Chr2:66040973-66040992 MsG0280010196.01.T01:intron 35.0%
GTTATAGGATTGAAGACGAT+GGG + Chr2:66039373-66039392 None:intergenic 35.0%
GTTTGATAGATCCGATTATC+TGG + Chr2:66039330-66039349 None:intergenic 35.0%
TAATCATGTGGTAGGTTTGA+TGG - Chr2:66045180-66045199 MsG0280010196.01.T01:intron 35.0%
TAGACAAAAACGTGCCTTTA+AGG + Chr2:66041700-66041719 None:intergenic 35.0%
TCAGATTTCATGTTACTGGA+AGG - Chr2:66045018-66045037 MsG0280010196.01.T01:intron 35.0%
TCAGCAAGAAAAATCAAGCT+CGG - Chr2:66041220-66041239 MsG0280010196.01.T01:intron 35.0%
TGTACGACTTTGGTAGAAAT+AGG + Chr2:66043358-66043377 None:intergenic 35.0%
TGTGAAACCAATCTTCCTAA+TGG - Chr2:66044838-66044857 MsG0280010196.01.T01:intron 35.0%
TTACAATCAAATGCACCCTT+GGG + Chr2:66042790-66042809 None:intergenic 35.0%
TTACTGTTTCGAAGAAATCG+AGG - Chr2:66039720-66039739 MsG0280010196.01.T01:intron 35.0%
TTCAACCACAACCAATATCA+CGG + Chr2:66043548-66043567 None:intergenic 35.0%
TTCATCTCTTTCAACTTTGC+TGG + Chr2:66043954-66043973 None:intergenic 35.0%
TTTACAATCAAATGCACCCT+TGG + Chr2:66042791-66042810 None:intergenic 35.0%
TTTCATGTTACTGGAAGGTT+CGG - Chr2:66045023-66045042 MsG0280010196.01.T01:intron 35.0%
! AATGTGCCTTTTACAGTTTG+CGG + Chr2:66041564-66041583 None:intergenic 35.0%
! AATTTTCCCCTCTGATTGTA+GGG - Chr2:66043582-66043601 MsG0280010196.01.T01:intron 35.0%
! ATAGTTAAATTTTCGGCGGA+GGG - Chr2:66045058-66045077 MsG0280010196.01.T01:intron 35.0%
! ATGTCAAGACATCCATGTTT+TGG - Chr2:66041650-66041669 MsG0280010196.01.T01:CDS 35.0%
! ATTTTCTTGCAGCTTATAGG+TGG - Chr2:66042492-66042511 MsG0280010196.01.T01:intron 35.0%
! GAGATTTGGATTTTGCATGT+TGG - Chr2:66040202-66040221 MsG0280010196.01.T01:CDS 35.0%
! GGTATCTTCGATTTTGTAGT+TGG - Chr2:66040874-66040893 MsG0280010196.01.T01:intron 35.0%
! GTGAGAAATTCATGTCACTT+TGG - Chr2:66043604-66043623 MsG0280010196.01.T01:intron 35.0%
! TAATTTTCCCCTCTGATTGT+AGG - Chr2:66043581-66043600 MsG0280010196.01.T01:intron 35.0%
! TATAGTTAAATTTTCGGCGG+AGG - Chr2:66045057-66045076 MsG0280010196.01.T01:intron 35.0%
! TCACCACTGATATGCTTTTA+TGG - Chr2:66042178-66042197 MsG0280010196.01.T01:intron 35.0%
! TCTTCTTTGCTTTCTTTTCG+AGG + Chr2:66044513-66044532 None:intergenic 35.0%
! TGTCGTTGCTCATTTTATGT+TGG + Chr2:66038744-66038763 None:intergenic 35.0%
! TTTTCTTGCAGCTTATAGGT+GGG - Chr2:66042493-66042512 MsG0280010196.01.T01:intron 35.0%
! TTTTGTAGTTGGAGCTATGT+CGG - Chr2:66040885-66040904 MsG0280010196.01.T01:intron 35.0%
! TTTTGTCATCGTTGGATATG+AGG - Chr2:66043667-66043686 MsG0280010196.01.T01:intron 35.0%
!! AGAAGACCCCTTTTGAAAAA+GGG + Chr2:66039979-66039998 None:intergenic 35.0%
!! ATCTTCTTAGCTCTATACAC+TGG - Chr2:66040007-66040026 MsG0280010196.01.T01:CDS 35.0%
!! CAGATCAATCTTAGCTTTGA+TGG + Chr2:66041187-66041206 None:intergenic 35.0%
!! TCAATCTTAGCTTTGATGGA+TGG + Chr2:66041183-66041202 None:intergenic 35.0%
!! TTCTCCTTTTCAAGAGTAAC+AGG + Chr2:66040973-66040992 None:intergenic 35.0%
!!! ACTTTATTTTCCGGTCTTGA+AGG - Chr2:66041500-66041519 MsG0280010196.01.T01:intron 35.0%
!!! CTTTATTTTCCGGTCTTGAA+GGG - Chr2:66041501-66041520 MsG0280010196.01.T01:intron 35.0%
!!! GGTTTTGGGTTTTGCAATTT+TGG + Chr2:66039617-66039636 None:intergenic 35.0%
!!! TTGGAGACCCTTTTTCAAAA+GGG - Chr2:66039969-66039988 MsG0280010196.01.T01:CDS 35.0%
!!! TTTGGAGACCCTTTTTCAAA+AGG - Chr2:66039968-66039987 MsG0280010196.01.T01:CDS 35.0%
AAAGGTGGATGATGTTGTTG+AGG - Chr2:66044600-66044619 MsG0280010196.01.T01:intron 40.0%
AACAAACGCGAAATACAGAC+GGG + Chr2:66045216-66045235 None:intergenic 40.0%
AATGGATGGCTAGGTTTATG+AGG - Chr2:66044856-66044875 MsG0280010196.01.T01:intron 40.0%
AGAAGTTTAGTCCTAGAAGG+AGG - Chr2:66044814-66044833 MsG0280010196.01.T01:intron 40.0%
AGACTGGATATCGATGTCAA+TGG + Chr2:66042592-66042611 None:intergenic 40.0%
AGTCCAAAGCAAGTCATTGT+TGG + Chr2:66044734-66044753 None:intergenic 40.0%
AGTGAAGGAAAAGGTCACAA+AGG - Chr2:66044633-66044652 MsG0280010196.01.T01:intron 40.0%
ATCTTACCTTAACCTGGTCT+TGG + Chr2:66042374-66042393 None:intergenic 40.0%
ATTTCTCACCCTACAATCAG+AGG + Chr2:66043593-66043612 None:intergenic 40.0%
CACATAAACCCTACAACCAA+GGG - Chr2:66038676-66038695 MsG0280010196.01.T01:three_prime_UTR 40.0%
CATAAACCTAGCCATCCATT+AGG + Chr2:66044856-66044875 None:intergenic 40.0%
CCAAATAAGGCCTTACTAGT+GGG - Chr2:66044421-66044440 MsG0280010196.01.T01:intron 40.0%
CCCAATAGTATCATGCAACT+TGG + Chr2:66042337-66042356 None:intergenic 40.0%
CGAAAGATGTTGCTGAAGAA+TGG - Chr2:66041100-66041119 MsG0280010196.01.T01:intron 40.0%
CGTGAAATCAAACAGCTTGA+GGG - Chr2:66042273-66042292 MsG0280010196.01.T01:intron 40.0%
CTGCGCAATTCAAATAATGC+TGG - Chr2:66042023-66042042 MsG0280010196.01.T01:intron 40.0%
GAACAAACGCGAAATACAGA+CGG + Chr2:66045217-66045236 None:intergenic 40.0%
GAGAGTTAGATCATGACACT+AGG + Chr2:66043290-66043309 None:intergenic 40.0%
GATTTCTCTGACCGTGATAT+TGG - Chr2:66043534-66043553 MsG0280010196.01.T01:intron 40.0%
GGAAGCTGAGAAGAAACTTA+AGG - Chr2:66044070-66044089 MsG0280010196.01.T01:intron 40.0%
GGATTTAGATCCCACTAGTA+AGG + Chr2:66044434-66044453 None:intergenic 40.0%
GTGAAATCAAACAGCTTGAG+GGG - Chr2:66042274-66042293 MsG0280010196.01.T01:intron 40.0%
GTTATAGGGTTGAAGACGAT+AGG + Chr2:66039185-66039204 None:intergenic 40.0%
GTTCAAGGACCAATGGATAA+CGG - Chr2:66040931-66040950 MsG0280010196.01.T01:intron 40.0%
TAGCCATCCATTAGGAAGAT+TGG + Chr2:66044848-66044867 None:intergenic 40.0%
TCATTGCCAATTCTGCAATG+AGG - Chr2:66042310-66042329 MsG0280010196.01.T01:intron 40.0%
TCCAAATAAGGCCTTACTAG+TGG - Chr2:66044420-66044439 MsG0280010196.01.T01:intron 40.0%
TCTTAGTGTCTCTTGACTCA+AGG - Chr2:66041531-66041550 MsG0280010196.01.T01:intron 40.0%
TGAAAAGGAGAATGGAAAGC+CGG - Chr2:66040981-66041000 MsG0280010196.01.T01:intron 40.0%
TGAAACTTTGCCAGCTCAAA+AGG - Chr2:66043827-66043846 MsG0280010196.01.T01:intron 40.0%
TGACTTTGTTGAGTCTATGC+AGG + Chr2:66038781-66038800 None:intergenic 40.0%
TGATGAACTTTCACAGACAG+AGG - Chr2:66043428-66043447 MsG0280010196.01.T01:intron 40.0%
TGCTGAAAGGAAGAAGAAGA+TGG - Chr2:66044007-66044026 MsG0280010196.01.T01:intron 40.0%
TGTTGCACATGACTTGACAA+CGG - Chr2:66041772-66041791 MsG0280010196.01.T01:intron 40.0%
TTCCAAAAGCTATCCTGAAG+CGG - Chr2:66044701-66044720 MsG0280010196.01.T01:intron 40.0%
TTCTCAACTCAATTCCCCTA+AGG + Chr2:66044911-66044930 None:intergenic 40.0%
TTCTTCAGCAACATCTTTCG+GGG + Chr2:66041100-66041119 None:intergenic 40.0%
TTGATGTCATGTGATATGGC+TGG - Chr2:66040546-66040565 MsG0280010196.01.T01:CDS 40.0%
TTGCTAATCCTGATGCTGTT+GGG - Chr2:66044766-66044785 MsG0280010196.01.T01:intron 40.0%
TTTCTCACCCTACAATCAGA+GGG + Chr2:66043592-66043611 None:intergenic 40.0%
TTTCTTGCAGCTTATAGGTG+GGG - Chr2:66042494-66042513 MsG0280010196.01.T01:intron 40.0%
TTTGAACACCCTTGGTTGTA+GGG + Chr2:66038687-66038706 None:intergenic 40.0%
! AATCTTCCTAATGGATGGCT+AGG - Chr2:66044847-66044866 MsG0280010196.01.T01:intron 40.0%
! AGATTCTAAGAGAGGACAAC+AGG - Chr2:66041934-66041953 MsG0280010196.01.T01:CDS 40.0%
! CCTCAAGCTGTTTGATTTCA+CGG + Chr2:66042275-66042294 None:intergenic 40.0%
! CTTTTTACTTTGTCCGATGC+AGG - Chr2:66041145-66041164 MsG0280010196.01.T01:intron 40.0%
! TGGTCTTGGATGGTATCTTT+CGG + Chr2:66042360-66042379 None:intergenic 40.0%
! TTGATGGATGGATCGTCATA+AGG + Chr2:66041171-66041190 None:intergenic 40.0%
! TTGGGTTTTGCAATTTTGGG+TGG + Chr2:66039613-66039632 None:intergenic 40.0%
! TTGTGACCTTTTCCTTCACT+GGG + Chr2:66044633-66044652 None:intergenic 40.0%
! TTTGTGACCTTTTCCTTCAC+TGG + Chr2:66044634-66044653 None:intergenic 40.0%
!! AAAGGCACGTTTTTGTCTAC+TGG - Chr2:66041701-66041720 MsG0280010196.01.T01:intron 40.0%
!! AACAATGACTTGCTTTGGAC+TGG - Chr2:66044733-66044752 MsG0280010196.01.T01:intron 40.0%
!! AGTCCAACAATGACTTGCTT+TGG - Chr2:66044728-66044747 MsG0280010196.01.T01:intron 40.0%
!! GAGAAGACCCCTTTTGAAAA+AGG + Chr2:66039980-66039999 None:intergenic 40.0%
!! GATTTGGTTTCCTTTTGAGC+TGG + Chr2:66043840-66043859 None:intergenic 40.0%
!! TACAACCAAGGGTGTTCAAA+CGG - Chr2:66038687-66038706 MsG0280010196.01.T01:three_prime_UTR 40.0%
!!! AACGGTTTTGTTTGAACCCA+AGG - Chr2:66042771-66042790 MsG0280010196.01.T01:CDS 40.0%
!!! ACAGATTTTGGTAATGCCTC+AGG + Chr2:66043768-66043787 None:intergenic 40.0%
!!! ACGGTTTTGTTTGAACCCAA+GGG - Chr2:66042772-66042791 MsG0280010196.01.T01:CDS 40.0%
!!! ATAGCTTTTGGAATTGCCTC+TGG + Chr2:66044694-66044713 None:intergenic 40.0%
!!! GATTTTTTCAGGTTCGACAG+TGG + Chr2:66039755-66039774 None:intergenic 40.0%
!!! GCTAGTTTTTGTCATGCCAT+AGG - Chr2:66044268-66044287 MsG0280010196.01.T01:intron 40.0%
!!! GGTTTTATTGTTCAATGCCG+AGG + Chr2:66041678-66041697 None:intergenic 40.0%
!!! TGGAGACCCTTTTTCAAAAG+GGG - Chr2:66039970-66039989 MsG0280010196.01.T01:CDS 40.0%
AAGTCGTACACTTCTGACCA+AGG - Chr2:66043368-66043387 MsG0280010196.01.T01:intron 45.0%
AGAAAGAGAGACAGGCGATT+CGG - Chr2:66042532-66042551 MsG0280010196.01.T01:intron 45.0%
AGCAACATCTTTCGGGGTAT+TGG + Chr2:66041094-66041113 None:intergenic 45.0%
AGCAGCTCTCAAAGCACAAA+AGG - Chr2:66044049-66044068 MsG0280010196.01.T01:intron 45.0%
AGGAAACCAAATCCAAAGGG+AGG - Chr2:66043847-66043866 MsG0280010196.01.T01:intron 45.0%
ATCTGTCGCAAAACAGCCAA+AGG - Chr2:66043782-66043801 MsG0280010196.01.T01:intron 45.0%
CAAATCCAAAGGGAGGGATT+TGG - Chr2:66043854-66043873 MsG0280010196.01.T01:intron 45.0%
CAAATCCCTCCCTTTGGATT+TGG + Chr2:66043856-66043875 None:intergenic 45.0%
CACAAGTAAAGTGAGGGCTT+TGG + Chr2:66042124-66042143 None:intergenic 45.0%
CCACATAAACCCTACAACCA+AGG - Chr2:66038675-66038694 MsG0280010196.01.T01:three_prime_UTR 45.0%
CCGTGAAATCAAACAGCTTG+AGG - Chr2:66042272-66042291 MsG0280010196.01.T01:intron 45.0%
CCTTCAACACCGTTATCCAT+TGG + Chr2:66040943-66040962 None:intergenic 45.0%
CCTTGGTTGTAGGGTTTATG+TGG + Chr2:66038678-66038697 None:intergenic 45.0%
CGAGGCAACTGAACAAGAAA+AGG - Chr2:66044582-66044601 MsG0280010196.01.T01:intron 45.0%
CTATGCAGGTTGCTATGTGT+TGG + Chr2:66038767-66038786 None:intergenic 45.0%
CTTATAGGTGGGGATTTGGA+TGG - Chr2:66042504-66042523 MsG0280010196.01.T01:intron 45.0%
CTTGCTAATCCTGATGCTGT+TGG - Chr2:66044765-66044784 MsG0280010196.01.T01:intron 45.0%
CTTGGTCCTCATTGCAGAAT+TGG + Chr2:66042319-66042338 None:intergenic 45.0%
GAAAGATACCATCCAAGACC+AGG - Chr2:66042359-66042378 MsG0280010196.01.T01:intron 45.0%
GAATGAATCTGCTTAGGTGC+AGG + Chr2:66041126-66041145 None:intergenic 45.0%
GAGTTCAGTGGATCTGTACA+AGG + Chr2:66039089-66039108 None:intergenic 45.0%
GGAAACCAAATCCAAAGGGA+GGG - Chr2:66043848-66043867 MsG0280010196.01.T01:intron 45.0%
GGCAAAGTTTCAACTGGAGA+AGG + Chr2:66043819-66043838 None:intergenic 45.0%
GGCAACTGAACAAGAAAAGG+TGG - Chr2:66044585-66044604 MsG0280010196.01.T01:intron 45.0%
GTCATGTGATATGGCTGGAT+TGG - Chr2:66040551-66040570 MsG0280010196.01.T01:CDS 45.0%
GTTGAGCCGCAAACTGTAAA+AGG - Chr2:66041555-66041574 MsG0280010196.01.T01:CDS 45.0%
GTTGCACATGACTTGACAAC+GGG - Chr2:66041773-66041792 MsG0280010196.01.T01:intron 45.0%
GTTTCAACTGGAGAAGGCTT+AGG + Chr2:66043813-66043832 None:intergenic 45.0%
GTTTGAACACCCTTGGTTGT+AGG + Chr2:66038688-66038707 None:intergenic 45.0%
TACCATCCAAGACCAGGTTA+AGG - Chr2:66042365-66042384 MsG0280010196.01.T01:intron 45.0%
TCAAATAATGCTGGTCGAGG+CGG - Chr2:66042032-66042051 MsG0280010196.01.T01:intron 45.0%
TCACAAAGGAAAGCAGTGTC+AGG - Chr2:66044647-66044666 MsG0280010196.01.T01:intron 45.0%
TCCATGTGAGCCAAACTTGA+TGG + Chr2:66041031-66041050 None:intergenic 45.0%
TCTTTACTCTTCCCTGCAGT+CGG - Chr2:66041884-66041903 MsG0280010196.01.T01:CDS 45.0%
TGAGCTGGCAAAGTTTCAAC+TGG + Chr2:66043825-66043844 None:intergenic 45.0%
TGCTAATCCTGATGCTGTTG+GGG - Chr2:66044767-66044786 MsG0280010196.01.T01:intron 45.0%
TGGAGATGAATCTGCGAAAG+CGG - Chr2:66041047-66041066 MsG0280010196.01.T01:intron 45.0%
TGGAGTGAAGAAAGAGAGAC+AGG - Chr2:66042524-66042543 MsG0280010196.01.T01:intron 45.0%
TTCTCACCCTACAATCAGAG+GGG + Chr2:66043591-66043610 None:intergenic 45.0%
TTCTTGAGTAAACCTGCACG+TGG - Chr2:66039871-66039890 MsG0280010196.01.T01:CDS 45.0%
! ACCATCAAGTTTGGCTCACA+TGG - Chr2:66041027-66041046 MsG0280010196.01.T01:intron 45.0%
! ACTCAGATTTTTCCGACTGC+AGG + Chr2:66041899-66041918 None:intergenic 45.0%
! ATTTCAGGCTCTTTTGCAGC+AGG + Chr2:66043927-66043946 None:intergenic 45.0%
! CAAGCTGTTTGATTTCACGG+AGG + Chr2:66042272-66042291 None:intergenic 45.0%
! CCAATGGATAACGGTGTTGA+AGG - Chr2:66040940-66040959 MsG0280010196.01.T01:intron 45.0%
! CTCAGATTTTTCCGACTGCA+GGG + Chr2:66041898-66041917 None:intergenic 45.0%
! TCTGACCGTGATATTGGTTG+TGG - Chr2:66043540-66043559 MsG0280010196.01.T01:intron 45.0%
! TGGTCAGAAGTGTACGACTT+TGG + Chr2:66043368-66043387 None:intergenic 45.0%
! TGTGACCTTTTCCTTCACTG+GGG + Chr2:66044632-66044651 None:intergenic 45.0%
! TGTGCTTTTGCTCCTGTCTT+TGG - Chr2:66044947-66044966 MsG0280010196.01.T01:intron 45.0%
! TTCCGCTTCAGGATAGCTTT+TGG + Chr2:66044706-66044725 None:intergenic 45.0%
!! AAGCAAAGCTTGCTGCTGAA+AGG - Chr2:66043994-66044013 MsG0280010196.01.T01:intron 45.0%
!! ACAACCAAGGGTGTTCAAAC+GGG - Chr2:66038688-66038707 MsG0280010196.01.T01:three_prime_UTR 45.0%
!! CCCACTAGTAAGGCCTTATT+TGG + Chr2:66044424-66044443 None:intergenic 45.0%
!! GGCTGTTTTGCGACAGATTT+TGG + Chr2:66043780-66043799 None:intergenic 45.0%
!! TACCTTAACCTGGTCTTGGA+TGG + Chr2:66042370-66042389 None:intergenic 45.0%
!! TGTTGGACTTTTTCCGCTTC+AGG + Chr2:66044717-66044736 None:intergenic 45.0%
!! TTCATGTCACTTTGGAACGG+CGG - Chr2:66043612-66043631 MsG0280010196.01.T01:intron 45.0%
!! TTGAGAGCATTCAGAAGCTG+AGG - Chr2:66042658-66042677 MsG0280010196.01.T01:CDS 45.0%
!!! ACATCCATGTTTTGGTGCCT+CGG - Chr2:66041658-66041677 MsG0280010196.01.T01:CDS 45.0%
!! AAAATTAAAAACTTTATAAA+GGG + Chr2:66040160-66040179 None:intergenic 5.0%
!! AATATTGTTAAAATTAAAAA+CGG - Chr2:66042753-66042772 MsG0280010196.01.T01:CDS 5.0%
!!! TAAATAAAAATCAAATTTTT+AGG + Chr2:66040440-66040459 None:intergenic 5.0%
AAGGTCGGAGACGATGAGTT+CGG + Chr2:66038882-66038901 None:intergenic 50.0%
CAAACAGCTTGAGGGGACAA+GGG - Chr2:66042281-66042300 MsG0280010196.01.T01:intron 50.0%
CAAATAATGCTGGTCGAGGC+GGG - Chr2:66042033-66042052 MsG0280010196.01.T01:intron 50.0%
CATCGATATCCAGTCTCTGC+AGG - Chr2:66042596-66042615 MsG0280010196.01.T01:intron 50.0%
CGAGATGGTTCAAGGACCAA+TGG - Chr2:66040924-66040943 MsG0280010196.01.T01:intron 50.0%
CTGAGGAAACAGCGTGATGA+GGG - Chr2:66042675-66042694 MsG0280010196.01.T01:CDS 50.0%
GAATGCTCTCGTGCTGAATG+CGG + Chr2:66042227-66042246 None:intergenic 50.0%
GACACGAATCCCTTCAAGAC+CGG + Chr2:66041513-66041532 None:intergenic 50.0%
GATCGTCATAAGGCCTGCAT+CGG + Chr2:66041161-66041180 None:intergenic 50.0%
GCAGCTTATAGGTGGGGATT+TGG - Chr2:66042500-66042519 MsG0280010196.01.T01:intron 50.0%
GCTGGTGAGACCATCAAGTT+TGG - Chr2:66041018-66041037 MsG0280010196.01.T01:intron 50.0%
GGAAAGCCGGAGAAAGATCT+GGG - Chr2:66040994-66041013 MsG0280010196.01.T01:intron 50.0%
GGATATGAGGCAGCTGAGTA+GGG - Chr2:66043680-66043699 MsG0280010196.01.T01:intron 50.0%
GGGTGTTCAAACGGGTAACA+AGG - Chr2:66038696-66038715 MsG0280010196.01.T01:three_prime_UTR 50.0%
GTCAGAGACGATGAGTTCAG+TGG + Chr2:66039101-66039120 None:intergenic 50.0%
GTGGGATTCGAGATGGTTCA+AGG - Chr2:66040916-66040935 MsG0280010196.01.T01:intron 50.0%
GTTACCCGTTTGAACACCCT+TGG + Chr2:66038695-66038714 None:intergenic 50.0%
TCAAACAGCTTGAGGGGACA+AGG - Chr2:66042280-66042299 MsG0280010196.01.T01:intron 50.0%
TGAAGGCAAAGAGGGTGAGT+TGG - Chr2:66041262-66041281 MsG0280010196.01.T01:CDS 50.0%
TGAGGAAACAGCGTGATGAG+GGG - Chr2:66042676-66042695 MsG0280010196.01.T01:CDS 50.0%
TGAGGTTGTGGGATTCGAGA+TGG - Chr2:66040909-66040928 MsG0280010196.01.T01:intron 50.0%
TGGAAAGCCGGAGAAAGATC+TGG - Chr2:66040993-66041012 MsG0280010196.01.T01:intron 50.0%
TGGATATGAGGCAGCTGAGT+AGG - Chr2:66043679-66043698 MsG0280010196.01.T01:intron 50.0%
TGGTTTCACAGCCTCCTTCT+AGG + Chr2:66044828-66044847 None:intergenic 50.0%
TTGAGTAAACCTGCACGTGG+AGG - Chr2:66039874-66039893 MsG0280010196.01.T01:CDS 50.0%
! AATGCCGAGGCACCAAAACA+TGG + Chr2:66041665-66041684 None:intergenic 50.0%
! AGCTATGTCGGTTGAGGTTG+TGG - Chr2:66040897-66040916 MsG0280010196.01.T01:intron 50.0%
! AGTTGGAGCTATGTCGGTTG+AGG - Chr2:66040891-66040910 MsG0280010196.01.T01:intron 50.0%
! GAACGGCGGCAAAGCTTTTA+GGG - Chr2:66043626-66043645 MsG0280010196.01.T01:intron 50.0%
! GACAGGAGCAAAAGCACAAC+AGG + Chr2:66044945-66044964 None:intergenic 50.0%
! GCTATGTCGGTTGAGGTTGT+GGG - Chr2:66040898-66040917 MsG0280010196.01.T01:intron 50.0%
! TTGCCTCTGGTGCTTTTGCT+CGG + Chr2:66044681-66044700 None:intergenic 50.0%
!! TCAGATCACTGAAGCGCTGA+AGG - Chr2:66041245-66041264 MsG0280010196.01.T01:CDS 50.0%
!! TGAAGCGCTGAAGGCAAAGA+GGG - Chr2:66041254-66041273 MsG0280010196.01.T01:CDS 50.0%
ACAGGAAGCTGCAGAAGTCG+AGG - Chr2:66044564-66044583 MsG0280010196.01.T01:intron 55.0%
AGGCGGGATCTTCTCATCTG+AGG - Chr2:66042049-66042068 MsG0280010196.01.T01:intron 55.0%
ATGAGGCAGCTGAGTAGGGA+CGG - Chr2:66043684-66043703 MsG0280010196.01.T01:intron 55.0%
ATGCAAGCCCCAACAGCATC+AGG + Chr2:66044777-66044796 None:intergenic 55.0%
CCAGCTCCCAGATCTTTCTC+CGG + Chr2:66041003-66041022 None:intergenic 55.0%
CGGAGACGATGAGTTCGGTT+AGG + Chr2:66038877-66038896 None:intergenic 55.0%
CGGGATCTTCTCATCTGAGG+AGG - Chr2:66042052-66042071 MsG0280010196.01.T01:intron 55.0%
CTGGGATGAAAAGCCACTGC+TGG - Chr2:66043719-66043738 MsG0280010196.01.T01:intron 55.0%
CTTCTTCTTCCTCCACGTGC+AGG + Chr2:66039886-66039905 None:intergenic 55.0%
GAAGGCTTAGGCGCTTCCTT+TGG + Chr2:66043801-66043820 None:intergenic 55.0%
GAGGAAACAGCGTGATGAGG+GGG - Chr2:66042677-66042696 MsG0280010196.01.T01:CDS 55.0%
GCTGAGGAAACAGCGTGATG+AGG - Chr2:66042674-66042693 MsG0280010196.01.T01:CDS 55.0%
GGTTTCGGTTCTTCCAGCAG+TGG + Chr2:66043735-66043754 None:intergenic 55.0%
TCAGGCTCAGCAGCAGGTTT+CGG + Chr2:66043750-66043769 None:intergenic 55.0%
TGCAGCTTCCTGTTCCTCCT+GGG + Chr2:66044557-66044576 None:intergenic 55.0%
TGCTGCCAAATCCCTCCCTT+TGG + Chr2:66043862-66043881 None:intergenic 55.0%
! ACCTTTTCCTTCACTGGGGC+AGG + Chr2:66044628-66044647 None:intergenic 55.0%
! CCTTTTCCTTCACTGGGGCA+GGG + Chr2:66044627-66044646 None:intergenic 55.0%
! CTTTTCCTTCACTGGGGCAG+GGG + Chr2:66044626-66044645 None:intergenic 55.0%
! GGAACGGCGGCAAAGCTTTT+AGG - Chr2:66043625-66043644 MsG0280010196.01.T01:intron 55.0%
! TGGTGCTTTTGCTCGGCTTC+TGG + Chr2:66044674-66044693 None:intergenic 55.0%
!! AAGCCGAGCAAAAGCACCAG+AGG - Chr2:66044675-66044694 MsG0280010196.01.T01:intron 55.0%
!! CTGAAGCGCTGAAGGCAAAG+AGG - Chr2:66041253-66041272 MsG0280010196.01.T01:CDS 55.0%
AATGCCTCAGGCTCAGCAGC+AGG + Chr2:66043756-66043775 None:intergenic 60.0%
CCAGTCTCTGCAGGCAGAAC+TGG - Chr2:66042605-66042624 MsG0280010196.01.T01:intron 60.0%
CCAGTTCTGCCTGCAGAGAC+TGG + Chr2:66042608-66042627 None:intergenic 60.0%
CCCTGCCCCAGTGAAGGAAA+AGG - Chr2:66044624-66044643 MsG0280010196.01.T01:intron 60.0%
CCGGAGAAAGATCTGGGAGC+TGG - Chr2:66041000-66041019 MsG0280010196.01.T01:intron 60.0%
CTGCAGCTTCCTGTTCCTCC+TGG + Chr2:66044558-66044577 None:intergenic 60.0%
GAAACCTGCTGCTGAGCCTG+AGG - Chr2:66043749-66043768 MsG0280010196.01.T01:intron 60.0%
GCAGCTTCCTGTTCCTCCTG+GGG + Chr2:66044556-66044575 None:intergenic 60.0%
GGAGATTGAGCCTCTGCAGC+AGG - Chr2:66041989-66042008 MsG0280010196.01.T01:CDS 60.0%
TCTGACCAAGGCACGTGAGC+TGG - Chr2:66043380-66043399 MsG0280010196.01.T01:intron 60.0%
TGAGGCAGCTGAGTAGGGAC+GGG - Chr2:66043685-66043704 MsG0280010196.01.T01:intron 60.0%
TTCCTGTTCCTCCTGGGGAG+TGG + Chr2:66044551-66044570 None:intergenic 60.0%
TTTCCCAGTGCCTGCTGCAG+AGG + Chr2:66042002-66042021 None:intergenic 60.0%
!! GCAGCAGGAGTGTCCTTGTG+AGG + Chr2:66043912-66043931 None:intergenic 60.0%
AGCAGCCAGCTCACGTGCCT+TGG + Chr2:66043388-66043407 None:intergenic 65.0%
GAGCCTCTGCAGCAGGCACT+GGG - Chr2:66041996-66042015 MsG0280010196.01.T01:CDS 65.0%
GGACGGGCGCATGAGGAACT+GGG - Chr2:66043701-66043720 MsG0280010196.01.T01:intron 65.0%
TGAGCCTCTGCAGCAGGCAC+TGG - Chr2:66041995-66042014 MsG0280010196.01.T01:CDS 65.0%
TGAGTAGGGACGGGCGCATG+AGG - Chr2:66043694-66043713 MsG0280010196.01.T01:intron 65.0%
TGCCACTCCCCAGGAGGAAC+AGG - Chr2:66044546-66044565 MsG0280010196.01.T01:intron 65.0%
AGCTGCTGCCACTCCCCAGG+AGG - Chr2:66044540-66044559 MsG0280010196.01.T01:intron 70.0%
GGGACGGGCGCATGAGGAAC+TGG - Chr2:66043700-66043719 MsG0280010196.01.T01:intron 70.0%
TGAGGCCCCTGCCCCAGTGA+AGG - Chr2:66044618-66044637 MsG0280010196.01.T01:intron 70.0%
TGGAGCTGCTGCCACTCCCC+AGG - Chr2:66044537-66044556 MsG0280010196.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 66038640 66045283 66038640 ID=MsG0280010196.01;Name=MsG0280010196.01
Chr2 mRNA 66038640 66045283 66038640 ID=MsG0280010196.01.T01;Parent=MsG0280010196.01;Name=MsG0280010196.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0.85|0.87|0.87|1|1|8|470|641
Chr2 exon 66038640 66039415 66038640 ID=MsG0280010196.01.T01:exon:5217;Parent=MsG0280010196.01.T01
Chr2 exon 66039832 66040320 66039832 ID=MsG0280010196.01.T01:exon:5216;Parent=MsG0280010196.01.T01
Chr2 exon 66040474 66040572 66040474 ID=MsG0280010196.01.T01:exon:5215;Parent=MsG0280010196.01.T01
Chr2 exon 66041225 66041419 66041225 ID=MsG0280010196.01.T01:exon:5214;Parent=MsG0280010196.01.T01
Chr2 exon 66041537 66041716 66041537 ID=MsG0280010196.01.T01:exon:5213;Parent=MsG0280010196.01.T01
Chr2 exon 66041835 66042020 66041835 ID=MsG0280010196.01.T01:exon:5212;Parent=MsG0280010196.01.T01
Chr2 exon 66042648 66043048 66042648 ID=MsG0280010196.01.T01:exon:5211;Parent=MsG0280010196.01.T01
Chr2 exon 66045214 66045283 66045214 ID=MsG0280010196.01.T01:exon:5210;Parent=MsG0280010196.01.T01
Chr2 CDS 66045214 66045283 66045214 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66042648 66043048 66042648 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66041835 66042020 66041835 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66041537 66041716 66041537 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66041225 66041419 66041225 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66040474 66040572 66040474 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66039832 66040320 66039832 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 CDS 66039110 66039415 66039110 ID=MsG0280010196.01.T01:cds;Parent=MsG0280010196.01.T01
Chr2 three_prime_UTR 66038640 66039109 66038640 ID=MsG0280010196.01.T01:three_prime_utr;Parent=MsG0280010196.01.T01
Gene Sequence

>MsG0280010196.01.T01

ATGTACAATTTAACACGCGTCAGTCTTCATCTTATCCACATAAACCCTACAACCAAGGGTGTTCAAACGGGTATCTTCGATTTTGTAGTTGGAGCTATGTCGGTTGAGGTTGTGGGATTCGAGATGGTTCAAGGACCAATGGATAACGGTGTTGAAGGAGACAAACCTGTTACTCTTGAAAAGGAGAATGGAAAGCCGGAGAAAGATCTGGGAGCTGGTGAGACCATCAAGTTTGGCTCACATGGAGATGAATCTGCGAAAGCGGAAGTCAACGATGTTGCTGATTCCAATACCCCGAAAGATGTTGCTGAAGAATGGCCTGCACCTAAGCAGATTCATTCTTTTTACTTTGTCCGATGCAGGCCTTATGACGATCCATCCATCAAAGCTAAGATTGATCTGCTTGATAAGGAGATCAGCAAGAAAAATCAAGCTCGGTTTCAGATCACTGAAGCGCTGAAGGCAAAGAGGTCGGAAAAATCTGAGTTGATTTCTCAGATTAAGATTCTAAGAGAGGACAACAGGCAATATCAGAGTCTTTTTGATGAGAAAATGAAGGAGATTGAGCCTCTGCAGCAGGCACTGGGAAAGCTGCGCAATTCAAATAATGCTGGTCGAGGCGGGATCTTCTCATCTGAGGAGGAACTTGACCATTTCATATATGGCTTACAGTACCGCATTCAGCACGAGAGCATTCCATTGACTGAAGAAAAGCAAATCCTCCGTGAAATCAAACAGCTTGAGGGGACAAGGGAGAAAGTCATTGCCAATTCTGCAATGAGGACCAAGTTGCATGATACTATTGGGCCGAAAGATACCATCCAAGACCAGGTTAAGCTTATAGGTGGGGATTTGGATGGAGTGAAGAAAGAGAGACAGGCGATTCGGTCCAAAATCAAGCAAATTGATGATGTGCTGAAAGCCATTGACATCGATATCCAGTCTCTGCAGGCAGAACTGGTAGCTGTTACTCAGAAGAGGGAACAAGCTTTTGAGAGCATTCAGAAGCTGAGGAAACAGCGTGATGAGGGGAACTCCTATTTCTACCAAAGTCGTACACTTCTGACCAAGGCACGTGAGCTGGCTGCTAAGAAAGATGTTGCTGCTATTGATGAACTTTCACAGACAGAGGGTGAGAAATTCATGTCACTTTGGAACGGCGGCAAAGCTTTTAGGGCTGATTATGAGAAAAGAATTTTGTCATCGTTGGATATGAGGCAGCTGAGTAGGGACGGGCGCATGAGGAACTGGGATGAAAAGCCACTGCTGGAAGAACCGAAACCTGCTGCTGAGCCTGAGGCATTACCAAAATCTGTCGCAAAACAGCCAAAGGAAGCGCCTAAGCCTTCTCCAGTTGAAACTTTGCCAGCTCAAAAGGAAACCAAATCCAAAGGGAGGGATTTGGCAGCAGTTGATGATGATTATGAATTTGAAAATCCTCACAAGGACACTCCTGCTGCAAAAGAGCCTGAAATTGATCCAGCAAAGTTGAAAGAGATGAAAAGAGAAGAGGAAATTGCAAAAGCAAAGCTTGCTGCTGAAAGGAAGAAGAAGATGGCAGAGAAAGCTGCAGCAAAAGCAGCTCTCAAAGCACAAAAGGAAGCTGAGAAGAAACTTAAGGTCCTCGAAAAGAAAGCAAAGAAGAAGTCTGGAGCTGCTGCCACTCCCCAGGAGGAACAGGAAGCTGCAGAAGTCGAGGCAACTGAACAAGAAAAGGTGGATGATGTTGTTGAGGCCCCTGCCCCAGTGAAGGAAAAGGTCACAAAGGAAAGCAGTGTCAGGTCCAGAAGCCGAGCAAAAGCACCAGAGGCAATTCCAAAAGCTATCCTGAAGCGGAAAAAGTCCAACAATGACTTGCTTTGGACTGGTATTGCTGTCTTGCTAATCCTGATGCTGTTGGGGCTTGCATACATCTATTTTGTCTAA

Protein sequence

>MsG0280010196.01.T01

MYNLTRVSLHLIHINPTTKGVQTGIFDFVVGAMSVEVVGFEMVQGPMDNGVEGDKPVTLEKENGKPEKDLGAGETIKFGSHGDESAKAEVNDVADSNTPKDVAEEWPAPKQIHSFYFVRCRPYDDPSIKAKIDLLDKEISKKNQARFQITEALKAKRSEKSELISQIKILREDNRQYQSLFDEKMKEIEPLQQALGKLRNSNNAGRGGIFSSEEELDHFIYGLQYRIQHESIPLTEEKQILREIKQLEGTREKVIANSAMRTKLHDTIGPKDTIQDQVKLIGGDLDGVKKERQAIRSKIKQIDDVLKAIDIDIQSLQAELVAVTQKREQAFESIQKLRKQRDEGNSYFYQSRTLLTKARELAAKKDVAAIDELSQTEGEKFMSLWNGGKAFRADYEKRILSSLDMRQLSRDGRMRNWDEKPLLEEPKPAAEPEALPKSVAKQPKEAPKPSPVETLPAQKETKSKGRDLAAVDDDYEFENPHKDTPAAKEPEIDPAKLKEMKREEEIAKAKLAAERKKKMAEKAAAKAALKAQKEAEKKLKVLEKKAKKKSGAAATPQEEQEAAEVEATEQEKVDDVVEAPAPVKEKVTKESSVRSRSRAKAPEAIPKAILKRKKSNNDLLWTGIAVLLILMLLGLAYIYFV*