AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008327.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008327.01.T01 MTR_2g039960 95.592 431 1 1 9 439 1 413 0.0 838
MsG0280008327.01.T01 MTR_4g125970 89.145 433 29 1 7 439 16 430 0.0 792
MsG0280008327.01.T01 MTR_4g125970 89.327 431 28 1 9 439 1 413 0.0 791
MsG0280008327.01.T01 MTR_2g099620 88.863 431 30 1 9 439 1 413 0.0 788
MsG0280008327.01.T01 MTR_8g018400 88.631 431 31 1 9 439 1 413 0.0 784
MsG0280008327.01.T01 MTR_2g099620 93.367 392 26 0 48 439 6 397 0.0 761
MsG0280008327.01.T01 MTR_2g438110 65.952 373 127 0 67 439 34 406 0.0 523
MsG0280008327.01.T01 MTR_1g046570 60.660 394 118 5 82 439 6 398 5.23e-161 460
MsG0280008327.01.T01 MTR_8g018370 65.029 346 94 4 97 439 3 324 1.62e-150 431
MsG0280008327.01.T01 MTR_7g076820 40.872 367 215 2 66 432 149 513 3.97e-90 283
MsG0280008327.01.T01 MTR_7g076830 40.054 367 218 2 66 432 142 506 3.22e-88 278
MsG0280008327.01.T01 MTR_7g076800 40.054 367 218 2 66 432 140 504 3.82e-88 278
MsG0280008327.01.T01 MTR_3g107420 40.761 368 212 6 73 435 53 419 2.02e-79 252
MsG0280008327.01.T01 MTR_1g012420 39.674 368 216 6 73 435 53 419 4.26e-79 251
MsG0280008327.01.T01 MTR_4g010565 39.946 368 215 6 73 435 130 496 2.24e-77 249
MsG0280008327.01.T01 MTR_3g467550 35.753 372 223 4 66 422 116 486 4.16e-68 226
MsG0280008327.01.T01 MTR_1g061970 36.543 405 217 13 67 437 80 478 9.22e-68 224
MsG0280008327.01.T01 MTR_3g467550 35.616 365 219 4 73 422 92 455 3.43e-66 221
MsG0280008327.01.T01 MTR_4g049910 34.896 384 224 9 67 431 55 431 4.64e-65 216
MsG0280008327.01.T01 MTR_8g018350 63.905 169 47 5 278 439 15 176 5.50e-64 204
MsG0280008327.01.T01 MTR_3g449250 36.170 376 227 7 71 437 94 465 6.04e-64 216
MsG0280008327.01.T01 MTR_3g449250 36.170 376 227 7 71 437 94 465 1.08e-63 215
MsG0280008327.01.T01 MTR_2g100230 34.615 364 224 3 67 420 96 455 9.35e-63 211
MsG0280008327.01.T01 MTR_5g090120 34.501 371 230 6 71 432 85 451 2.26e-61 209
MsG0280008327.01.T01 MTR_6g082080 33.423 371 243 3 67 434 10 379 4.25e-61 205
MsG0280008327.01.T01 MTR_0915s0010 38.516 283 172 2 80 362 2 282 4.54e-61 200
MsG0280008327.01.T01 MTR_4g134170 35.040 371 205 6 73 413 293 657 4.58e-61 211
MsG0280008327.01.T01 MTR_7g056830 33.423 371 243 3 67 434 10 379 7.20e-61 204
MsG0280008327.01.T01 MTR_6g005320 35.230 369 205 6 73 413 255 617 1.28e-59 206
MsG0280008327.01.T01 MTR_8g018330 58.929 168 58 4 278 439 15 177 2.37e-59 192
MsG0280008327.01.T01 MTR_3g083690 33.846 390 235 8 66 433 144 532 3.11e-59 204
MsG0280008327.01.T01 MTR_7g109720 34.254 362 229 6 67 420 232 592 5.53e-59 206
MsG0280008327.01.T01 MTR_4g105100 33.333 363 236 2 67 423 202 564 1.63e-57 200
MsG0280008327.01.T01 MTR_4g114120 33.673 392 231 6 68 433 141 529 8.49e-57 199
MsG0280008327.01.T01 MTR_2g066050 34.167 360 232 3 67 421 53 412 2.11e-56 194
MsG0280008327.01.T01 MTR_4g079320 32.440 373 242 5 68 433 20 389 2.58e-56 199
MsG0280008327.01.T01 MTR_1g026830 29.612 412 267 9 44 439 128 532 1.46e-55 194
MsG0280008327.01.T01 MTR_3g467550 34.226 336 199 5 66 383 116 447 4.49e-55 189
MsG0280008327.01.T01 MTR_1g095810 30.848 389 250 8 67 439 145 530 1.86e-54 191
MsG0280008327.01.T01 MTR_1g054630 32.216 388 243 6 66 433 153 540 2.06e-54 191
MsG0280008327.01.T01 MTR_2g007000 33.590 390 231 7 67 438 504 883 7.82e-54 194
MsG0280008327.01.T01 MTR_2g032630 31.450 407 257 6 37 422 451 856 2.84e-53 192
MsG0280008327.01.T01 MTR_6g005550 31.579 380 249 5 67 438 165 541 5.13e-53 189
MsG0280008327.01.T01 MTR_3g049990 33.880 366 230 5 66 422 151 513 5.65e-53 189
MsG0280008327.01.T01 MTR_5g027840 34.341 364 222 6 62 410 96 457 5.12e-52 183
MsG0280008327.01.T01 MTR_6g033070 32.143 364 235 6 67 420 140 501 9.20e-49 174
MsG0280008327.01.T01 MTR_2g041140 32.637 383 242 7 53 422 124 503 4.22e-48 176
MsG0280008327.01.T01 MTR_2g055850 30.328 366 236 9 66 417 90 450 1.35e-43 160
MsG0280008327.01.T01 MTR_4g112340 30.447 358 227 10 76 417 106 457 1.66e-42 158
MsG0280008327.01.T01 MTR_7g100820 28.900 391 251 7 60 438 130 505 1.34e-41 156
MsG0280008327.01.T01 MTR_6g056080 30.484 351 217 6 71 406 115 453 3.57e-41 155
MsG0280008327.01.T01 MTR_2g063080 25.943 424 249 7 67 428 109 529 9.15e-41 153
MsG0280008327.01.T01 MTR_3g071620 28.919 370 233 8 73 414 22 389 3.95e-39 149
MsG0280008327.01.T01 MTR_4g105100 31.392 309 206 2 67 369 202 510 6.84e-39 147
MsG0280008327.01.T01 MTR_7g057250 25.624 441 242 9 65 425 161 595 1.64e-37 145
MsG0280008327.01.T01 MTR_8g027780 27.456 397 240 10 68 432 107 487 2.83e-37 143
MsG0280008327.01.T01 MTR_8g027775 28.278 389 247 10 68 432 103 483 4.07e-37 143
MsG0280008327.01.T01 MTR_8g097000 27.551 392 246 8 68 432 289 669 1.27e-36 143
MsG0280008327.01.T01 MTR_8g027770 27.456 397 235 10 68 432 202 577 1.44e-36 142
MsG0280008327.01.T01 MTR_1g102410 28.997 369 219 6 73 406 50 410 1.76e-36 142
MsG0280008327.01.T01 MTR_1g083130 27.139 409 243 8 67 423 26 431 1.65e-35 139
MsG0280008327.01.T01 MTR_3g107420 42.188 192 108 3 73 261 53 244 6.34e-35 132
MsG0280008327.01.T01 MTR_6g039840 28.272 382 242 10 67 422 110 485 3.58e-34 135
MsG0280008327.01.T01 MTR_4g059460 26.577 444 243 12 67 429 44 485 1.71e-33 133
MsG0280008327.01.T01 MTR_4g068990 28.198 344 224 9 94 421 102 438 1.10e-32 131
MsG0280008327.01.T01 MTR_5g092560 27.371 369 241 9 94 439 102 466 5.89e-32 129
MsG0280008327.01.T01 MTR_4g112320 30.249 281 183 8 143 417 2 275 1.51e-31 125
MsG0280008327.01.T01 MTR_2g043360 25.951 447 247 13 67 432 41 484 1.52e-30 124
MsG0280008327.01.T01 MTR_5g069330 27.151 372 251 7 62 422 2 364 6.73e-29 117
MsG0280008327.01.T01 MTR_5g069330 27.248 367 247 7 67 422 3 360 1.09e-28 117
MsG0280008327.01.T01 MTR_4g131750 26.854 391 239 12 75 427 90 471 2.74e-27 114
MsG0280008327.01.T01 MTR_8g027780 27.485 342 205 9 68 378 107 436 3.41e-27 113
MsG0280008327.01.T01 MTR_0427s0010 32.489 237 110 9 224 437 3 212 2.10e-26 106
MsG0280008327.01.T01 MTR_6g039840 29.276 304 192 8 136 422 12 309 2.57e-26 111
MsG0280008327.01.T01 MTR_4g077370 36.098 205 125 3 48 249 234 435 1.75e-25 108
MsG0280008327.01.T01 MTR_4g077370 34.197 193 95 4 67 249 2 172 4.77e-18 86.3
MsG0280008327.01.T01 MTR_3g118120 26.683 401 240 12 50 409 120 507 2.67e-25 108
MsG0280008327.01.T01 MTR_5g077690 25.661 378 212 12 105 415 71 446 5.20e-24 104
MsG0280008327.01.T01 MTR_4g459350 31.050 219 123 7 67 258 41 258 5.90e-20 89.7
MsG0280008327.01.T01 MTR_1g022305 24.779 339 185 9 89 421 26 300 7.42e-20 92.0
MsG0280008327.01.T01 MTR_4g068990 28.636 220 146 5 209 421 12 227 1.41e-19 91.7
MsG0280008327.01.T01 MTR_8g032230 38.235 136 83 1 67 201 10 145 2.19e-19 85.5
MsG0280008327.01.T01 MTR_5g092560 28.638 213 146 4 209 416 12 223 2.11e-18 87.8
MsG0280008327.01.T01 MTR_8g042690 23.861 373 250 11 79 430 30 389 5.98e-17 83.2
MsG0280008327.01.T01 MTR_2g043360 35.052 97 62 1 336 432 271 366 2.82e-14 75.1
MsG0280008327.01.T01 MTR_1g009617 31.683 101 67 1 339 439 178 276 3.55e-12 68.2
MsG0280008327.01.T01 MTR_1g023070 29.703 101 69 1 339 439 37 135 4.66e-12 64.7
MsG0280008327.01.T01 MTR_1g023070 29.703 101 69 1 339 439 37 135 2.33e-11 63.5
MsG0280008327.01.T02 MTR_2g039960 95.592 431 1 1 9 439 1 413 0.0 838
MsG0280008327.01.T02 MTR_4g125970 89.145 433 29 1 7 439 16 430 0.0 792
MsG0280008327.01.T02 MTR_4g125970 89.327 431 28 1 9 439 1 413 0.0 791
MsG0280008327.01.T02 MTR_2g099620 88.863 431 30 1 9 439 1 413 0.0 788
MsG0280008327.01.T02 MTR_8g018400 88.631 431 31 1 9 439 1 413 0.0 784
MsG0280008327.01.T02 MTR_2g099620 93.367 392 26 0 48 439 6 397 0.0 761
MsG0280008327.01.T02 MTR_2g438110 65.952 373 127 0 67 439 34 406 0.0 523
MsG0280008327.01.T02 MTR_1g046570 60.660 394 118 5 82 439 6 398 5.23e-161 460
MsG0280008327.01.T02 MTR_8g018370 65.029 346 94 4 97 439 3 324 1.62e-150 431
MsG0280008327.01.T02 MTR_7g076820 40.872 367 215 2 66 432 149 513 3.97e-90 283
MsG0280008327.01.T02 MTR_7g076830 40.054 367 218 2 66 432 142 506 3.22e-88 278
MsG0280008327.01.T02 MTR_7g076800 40.054 367 218 2 66 432 140 504 3.82e-88 278
MsG0280008327.01.T02 MTR_3g107420 40.761 368 212 6 73 435 53 419 2.02e-79 252
MsG0280008327.01.T02 MTR_1g012420 39.674 368 216 6 73 435 53 419 4.26e-79 251
MsG0280008327.01.T02 MTR_4g010565 39.946 368 215 6 73 435 130 496 2.24e-77 249
MsG0280008327.01.T02 MTR_3g467550 35.753 372 223 4 66 422 116 486 4.16e-68 226
MsG0280008327.01.T02 MTR_1g061970 36.543 405 217 13 67 437 80 478 9.22e-68 224
MsG0280008327.01.T02 MTR_3g467550 35.616 365 219 4 73 422 92 455 3.43e-66 221
MsG0280008327.01.T02 MTR_4g049910 34.896 384 224 9 67 431 55 431 4.64e-65 216
MsG0280008327.01.T02 MTR_8g018350 63.905 169 47 5 278 439 15 176 5.50e-64 204
MsG0280008327.01.T02 MTR_3g449250 36.170 376 227 7 71 437 94 465 6.04e-64 216
MsG0280008327.01.T02 MTR_3g449250 36.170 376 227 7 71 437 94 465 1.08e-63 215
MsG0280008327.01.T02 MTR_2g100230 34.615 364 224 3 67 420 96 455 9.35e-63 211
MsG0280008327.01.T02 MTR_5g090120 34.501 371 230 6 71 432 85 451 2.26e-61 209
MsG0280008327.01.T02 MTR_6g082080 33.423 371 243 3 67 434 10 379 4.25e-61 205
MsG0280008327.01.T02 MTR_0915s0010 38.516 283 172 2 80 362 2 282 4.54e-61 200
MsG0280008327.01.T02 MTR_4g134170 35.040 371 205 6 73 413 293 657 4.58e-61 211
MsG0280008327.01.T02 MTR_7g056830 33.423 371 243 3 67 434 10 379 7.20e-61 204
MsG0280008327.01.T02 MTR_6g005320 35.230 369 205 6 73 413 255 617 1.28e-59 206
MsG0280008327.01.T02 MTR_8g018330 58.929 168 58 4 278 439 15 177 2.37e-59 192
MsG0280008327.01.T02 MTR_3g083690 33.846 390 235 8 66 433 144 532 3.11e-59 204
MsG0280008327.01.T02 MTR_7g109720 34.254 362 229 6 67 420 232 592 5.53e-59 206
MsG0280008327.01.T02 MTR_4g105100 33.333 363 236 2 67 423 202 564 1.63e-57 200
MsG0280008327.01.T02 MTR_4g114120 33.673 392 231 6 68 433 141 529 8.49e-57 199
MsG0280008327.01.T02 MTR_2g066050 34.167 360 232 3 67 421 53 412 2.11e-56 194
MsG0280008327.01.T02 MTR_4g079320 32.440 373 242 5 68 433 20 389 2.58e-56 199
MsG0280008327.01.T02 MTR_1g026830 29.612 412 267 9 44 439 128 532 1.46e-55 194
MsG0280008327.01.T02 MTR_3g467550 34.226 336 199 5 66 383 116 447 4.49e-55 189
MsG0280008327.01.T02 MTR_1g095810 30.848 389 250 8 67 439 145 530 1.86e-54 191
MsG0280008327.01.T02 MTR_1g054630 32.216 388 243 6 66 433 153 540 2.06e-54 191
MsG0280008327.01.T02 MTR_2g007000 33.590 390 231 7 67 438 504 883 7.82e-54 194
MsG0280008327.01.T02 MTR_2g032630 31.450 407 257 6 37 422 451 856 2.84e-53 192
MsG0280008327.01.T02 MTR_6g005550 31.579 380 249 5 67 438 165 541 5.13e-53 189
MsG0280008327.01.T02 MTR_3g049990 33.880 366 230 5 66 422 151 513 5.65e-53 189
MsG0280008327.01.T02 MTR_5g027840 34.341 364 222 6 62 410 96 457 5.12e-52 183
MsG0280008327.01.T02 MTR_6g033070 32.143 364 235 6 67 420 140 501 9.20e-49 174
MsG0280008327.01.T02 MTR_2g041140 32.637 383 242 7 53 422 124 503 4.22e-48 176
MsG0280008327.01.T02 MTR_2g055850 30.328 366 236 9 66 417 90 450 1.35e-43 160
MsG0280008327.01.T02 MTR_4g112340 30.447 358 227 10 76 417 106 457 1.66e-42 158
MsG0280008327.01.T02 MTR_7g100820 28.900 391 251 7 60 438 130 505 1.34e-41 156
MsG0280008327.01.T02 MTR_6g056080 30.484 351 217 6 71 406 115 453 3.57e-41 155
MsG0280008327.01.T02 MTR_2g063080 25.943 424 249 7 67 428 109 529 9.15e-41 153
MsG0280008327.01.T02 MTR_3g071620 28.919 370 233 8 73 414 22 389 3.95e-39 149
MsG0280008327.01.T02 MTR_4g105100 31.392 309 206 2 67 369 202 510 6.84e-39 147
MsG0280008327.01.T02 MTR_7g057250 25.624 441 242 9 65 425 161 595 1.64e-37 145
MsG0280008327.01.T02 MTR_8g027780 27.456 397 240 10 68 432 107 487 2.83e-37 143
MsG0280008327.01.T02 MTR_8g027775 28.278 389 247 10 68 432 103 483 4.07e-37 143
MsG0280008327.01.T02 MTR_8g097000 27.551 392 246 8 68 432 289 669 1.27e-36 143
MsG0280008327.01.T02 MTR_8g027770 27.456 397 235 10 68 432 202 577 1.44e-36 142
MsG0280008327.01.T02 MTR_1g102410 28.997 369 219 6 73 406 50 410 1.76e-36 142
MsG0280008327.01.T02 MTR_1g083130 27.139 409 243 8 67 423 26 431 1.65e-35 139
MsG0280008327.01.T02 MTR_3g107420 42.188 192 108 3 73 261 53 244 6.34e-35 132
MsG0280008327.01.T02 MTR_6g039840 28.272 382 242 10 67 422 110 485 3.58e-34 135
MsG0280008327.01.T02 MTR_4g059460 26.577 444 243 12 67 429 44 485 1.71e-33 133
MsG0280008327.01.T02 MTR_4g068990 28.198 344 224 9 94 421 102 438 1.10e-32 131
MsG0280008327.01.T02 MTR_5g092560 27.371 369 241 9 94 439 102 466 5.89e-32 129
MsG0280008327.01.T02 MTR_4g112320 30.249 281 183 8 143 417 2 275 1.51e-31 125
MsG0280008327.01.T02 MTR_2g043360 25.951 447 247 13 67 432 41 484 1.52e-30 124
MsG0280008327.01.T02 MTR_5g069330 27.151 372 251 7 62 422 2 364 6.73e-29 117
MsG0280008327.01.T02 MTR_5g069330 27.248 367 247 7 67 422 3 360 1.09e-28 117
MsG0280008327.01.T02 MTR_4g131750 26.854 391 239 12 75 427 90 471 2.74e-27 114
MsG0280008327.01.T02 MTR_8g027780 27.485 342 205 9 68 378 107 436 3.41e-27 113
MsG0280008327.01.T02 MTR_0427s0010 32.489 237 110 9 224 437 3 212 2.10e-26 106
MsG0280008327.01.T02 MTR_6g039840 29.276 304 192 8 136 422 12 309 2.57e-26 111
MsG0280008327.01.T02 MTR_4g077370 36.098 205 125 3 48 249 234 435 1.75e-25 108
MsG0280008327.01.T02 MTR_4g077370 34.197 193 95 4 67 249 2 172 4.77e-18 86.3
MsG0280008327.01.T02 MTR_3g118120 26.683 401 240 12 50 409 120 507 2.67e-25 108
MsG0280008327.01.T02 MTR_5g077690 25.661 378 212 12 105 415 71 446 5.20e-24 104
MsG0280008327.01.T02 MTR_4g459350 31.050 219 123 7 67 258 41 258 5.90e-20 89.7
MsG0280008327.01.T02 MTR_1g022305 24.779 339 185 9 89 421 26 300 7.42e-20 92.0
MsG0280008327.01.T02 MTR_4g068990 28.636 220 146 5 209 421 12 227 1.41e-19 91.7
MsG0280008327.01.T02 MTR_8g032230 38.235 136 83 1 67 201 10 145 2.19e-19 85.5
MsG0280008327.01.T02 MTR_5g092560 28.638 213 146 4 209 416 12 223 2.11e-18 87.8
MsG0280008327.01.T02 MTR_8g042690 23.861 373 250 11 79 430 30 389 5.98e-17 83.2
MsG0280008327.01.T02 MTR_2g043360 35.052 97 62 1 336 432 271 366 2.82e-14 75.1
MsG0280008327.01.T02 MTR_1g009617 31.683 101 67 1 339 439 178 276 3.55e-12 68.2
MsG0280008327.01.T02 MTR_1g023070 29.703 101 69 1 339 439 37 135 4.66e-12 64.7
MsG0280008327.01.T02 MTR_1g023070 29.703 101 69 1 339 439 37 135 2.33e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008327.01.T01 AT3G13920 87.500 432 33 2 9 439 1 412 0.0 773
MsG0280008327.01.T01 AT1G54270 87.269 432 34 2 9 439 1 412 0.0 771
MsG0280008327.01.T01 AT3G13920 86.343 432 33 3 9 439 1 407 0.0 757
MsG0280008327.01.T01 AT1G54270 86.111 432 34 3 9 439 1 407 0.0 755
MsG0280008327.01.T01 AT1G72730 84.455 431 50 1 9 439 1 414 0.0 754
MsG0280008327.01.T01 AT3G13920 93.490 384 25 0 56 439 19 402 0.0 748
MsG0280008327.01.T01 AT3G13920 87.805 410 29 2 9 417 1 390 0.0 734
MsG0280008327.01.T01 AT3G13920 87.805 410 29 2 9 417 5 394 0.0 734
MsG0280008327.01.T01 AT3G19760 65.416 373 129 0 67 439 36 408 0.0 518
MsG0280008327.01.T01 AT1G51380 59.621 369 149 0 67 435 23 391 2.77e-165 471
MsG0280008327.01.T01 AT1G51380 59.524 252 102 0 67 318 23 274 1.74e-109 324
MsG0280008327.01.T01 AT3G61240 40.000 370 220 2 66 435 124 491 3.67e-91 285
MsG0280008327.01.T01 AT3G61240 40.000 370 220 2 66 435 124 491 3.67e-91 285
MsG0280008327.01.T01 AT4G00660 39.189 370 223 2 66 435 131 498 1.48e-89 281
MsG0280008327.01.T01 AT4G00660 39.189 370 223 2 66 435 131 498 1.48e-89 281
MsG0280008327.01.T01 AT2G45810 40.217 368 218 2 66 433 154 519 2.11e-89 281
MsG0280008327.01.T01 AT1G51380 56.872 211 91 0 67 277 23 233 3.74e-83 258
MsG0280008327.01.T01 AT1G51380 56.872 211 91 0 67 277 23 233 4.98e-83 258
MsG0280008327.01.T01 AT5G11170 39.946 368 215 6 73 435 53 419 1.80e-78 250
MsG0280008327.01.T01 AT5G11200 39.946 368 215 6 73 435 53 419 1.80e-78 250
MsG0280008327.01.T01 AT5G11170 39.466 337 198 6 104 435 1 336 1.81e-70 226
MsG0280008327.01.T01 AT5G11200 35.941 409 215 7 73 435 53 460 4.83e-70 229
MsG0280008327.01.T01 AT3G53110 35.338 399 232 11 59 433 81 477 2.13e-69 228
MsG0280008327.01.T01 AT5G26742 36.458 384 224 9 71 439 107 485 1.79e-65 223
MsG0280008327.01.T01 AT5G26742 36.458 384 224 9 71 439 107 485 1.82e-65 223
MsG0280008327.01.T01 AT5G26742 37.709 358 203 9 97 439 40 392 4.21e-65 221
MsG0280008327.01.T01 AT3G22310 35.372 376 230 6 71 437 121 492 7.19e-65 219
MsG0280008327.01.T01 AT3G22310 35.372 376 230 6 71 437 121 492 9.59e-65 219
MsG0280008327.01.T01 AT3G22330 35.372 376 230 6 71 437 109 480 1.35e-64 219
MsG0280008327.01.T01 AT2G33730 34.837 399 229 6 55 423 297 694 5.93e-64 219
MsG0280008327.01.T01 AT5G63120 34.656 378 241 2 68 439 167 544 2.90e-63 214
MsG0280008327.01.T01 AT1G55150 34.146 369 234 3 67 429 125 490 3.44e-63 213
MsG0280008327.01.T01 AT1G55150 34.146 369 234 3 67 429 100 465 3.85e-63 212
MsG0280008327.01.T01 AT1G77030 31.989 372 245 4 68 433 30 399 5.14e-59 207
MsG0280008327.01.T01 AT5G60990 32.225 391 251 3 62 439 5 394 6.68e-58 197
MsG0280008327.01.T01 AT3G01540 35.526 380 234 8 67 438 159 535 7.90e-58 201
MsG0280008327.01.T01 AT5G14610 33.333 378 245 4 67 438 170 546 8.11e-58 201
MsG0280008327.01.T01 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T01 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T01 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T01 AT5G14610 33.333 378 245 4 67 438 162 538 9.75e-58 201
MsG0280008327.01.T01 AT5G14610 33.333 378 245 4 67 438 162 538 1.11e-57 201
MsG0280008327.01.T01 AT1G16280 33.795 361 234 2 67 422 59 419 3.33e-57 196
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 197 571 6.94e-57 201
MsG0280008327.01.T01 AT3G58570 33.083 399 240 7 59 432 136 532 9.29e-57 198
MsG0280008327.01.T01 AT2G47330 33.594 384 238 8 67 438 229 607 1.56e-56 199
MsG0280008327.01.T01 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T01 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T01 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T01 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T01 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T01 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T01 AT3G06480 32.750 400 258 5 47 438 416 812 3.25e-56 201
MsG0280008327.01.T01 AT4G16630 34.400 375 237 4 57 422 155 529 2.32e-55 196
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T01 AT5G14610 30.266 413 259 5 32 438 18 407 1.37e-54 189
MsG0280008327.01.T01 AT5G14610 30.266 413 259 5 32 438 18 407 1.37e-54 189
MsG0280008327.01.T01 AT5G14610 30.993 413 276 5 32 438 197 606 1.76e-54 193
MsG0280008327.01.T01 AT3G02065 32.877 365 232 5 67 420 111 473 3.85e-54 188
MsG0280008327.01.T01 AT3G02065 32.877 365 232 5 67 420 111 473 3.85e-54 188
MsG0280008327.01.T01 AT4G33370 30.713 407 259 9 48 438 83 482 8.17e-54 188
MsG0280008327.01.T01 AT5G51280 30.670 388 250 7 67 438 147 531 1.77e-53 188
MsG0280008327.01.T01 AT1G28180 34.078 358 213 7 89 436 5 349 1.55e-51 178
MsG0280008327.01.T01 AT1G31970 32.713 376 235 7 67 429 117 487 2.39e-50 179
MsG0280008327.01.T01 AT3G18600 31.842 380 249 7 67 438 90 467 3.31e-50 179
MsG0280008327.01.T01 AT3G02065 33.233 331 208 5 101 420 8 336 4.97e-49 171
MsG0280008327.01.T01 AT1G12770 28.500 400 224 6 67 406 111 508 6.78e-49 175
MsG0280008327.01.T01 AT1G12770 28.500 400 224 6 67 406 111 508 6.78e-49 175
MsG0280008327.01.T01 AT3G09720 30.541 370 251 4 72 438 147 513 7.34e-48 172
MsG0280008327.01.T01 AT3G09720 30.541 370 251 4 72 438 147 513 7.34e-48 172
MsG0280008327.01.T01 AT3G09620 32.440 373 213 7 72 435 403 745 2.26e-47 175
MsG0280008327.01.T01 AT3G09620 32.440 373 213 7 72 435 402 744 2.37e-47 175
MsG0280008327.01.T01 AT5G65900 31.367 373 245 6 67 430 155 525 9.60e-46 168
MsG0280008327.01.T01 AT5G62190 31.250 368 229 8 81 431 111 471 7.81e-44 163
MsG0280008327.01.T01 AT5G63120 34.091 308 197 2 68 369 167 474 1.34e-43 159
MsG0280008327.01.T01 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T01 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T01 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T01 AT5G05450 29.973 367 230 8 73 414 23 387 5.96e-42 157
MsG0280008327.01.T01 AT5G14610 31.307 329 219 4 67 389 170 497 6.98e-41 152
MsG0280008327.01.T01 AT1G71370 30.028 353 229 8 73 409 23 373 8.04e-41 153
MsG0280008327.01.T01 AT3G06480 30.882 340 224 5 47 378 416 752 1.28e-39 152
MsG0280008327.01.T01 AT5G63630 30.027 373 242 7 68 421 56 428 1.97e-39 149
MsG0280008327.01.T01 AT5G08620 29.948 384 228 9 68 421 82 454 5.54e-38 145
MsG0280008327.01.T01 AT5G63630 30.027 373 242 7 68 421 250 622 6.01e-38 146
MsG0280008327.01.T01 AT2G07750 27.295 403 252 11 61 433 368 759 2.98e-37 145
MsG0280008327.01.T01 AT5G08610 29.765 383 230 9 68 421 384 756 3.42e-37 145
MsG0280008327.01.T01 AT5G11200 38.938 226 124 5 73 293 53 269 3.59e-35 136
MsG0280008327.01.T01 AT5G11200 38.506 174 104 3 264 435 306 478 3.27e-30 122
MsG0280008327.01.T01 AT1G63250 27.047 403 253 10 61 433 321 712 4.04e-35 139
MsG0280008327.01.T01 AT4G34910 26.034 411 247 8 67 423 47 454 9.60e-34 134
MsG0280008327.01.T01 AT5G54910 28.084 381 249 11 58 422 64 435 3.01e-33 133
MsG0280008327.01.T01 AT2G40700 25.676 444 249 12 67 429 31 474 1.87e-32 130
MsG0280008327.01.T01 AT5G19210 27.456 397 228 12 75 428 85 464 2.21e-32 128
MsG0280008327.01.T01 AT4G09730 25.515 388 253 8 63 422 109 488 1.51e-30 124
MsG0280008327.01.T01 AT1G71280 28.435 313 182 10 73 371 24 308 2.46e-27 112
MsG0280008327.01.T01 AT3G06980 28.684 380 229 14 67 409 375 749 5.29e-27 114
MsG0280008327.01.T01 AT4G15850 25.648 386 211 13 105 420 74 453 2.61e-26 111
MsG0280008327.01.T01 AT1G71280 28.435 313 182 10 73 371 24 308 3.59e-26 110
MsG0280008327.01.T01 AT3G16840 32.995 197 108 5 65 237 189 385 2.62e-20 94.4
MsG0280008327.01.T01 AT3G16840 32.995 197 108 5 65 237 190 386 2.63e-20 94.4
MsG0280008327.01.T01 AT5G19210 25.697 323 180 11 149 428 2 307 5.40e-18 84.7
MsG0280008327.01.T01 AT5G19210 25.697 323 180 11 149 428 2 307 5.40e-18 84.7
MsG0280008327.01.T01 AT1G28180 37.398 123 60 3 89 203 5 118 1.69e-13 67.4
MsG0280008327.01.T02 AT3G13920 87.500 432 33 2 9 439 1 412 0.0 773
MsG0280008327.01.T02 AT1G54270 87.269 432 34 2 9 439 1 412 0.0 771
MsG0280008327.01.T02 AT3G13920 86.343 432 33 3 9 439 1 407 0.0 757
MsG0280008327.01.T02 AT1G54270 86.111 432 34 3 9 439 1 407 0.0 755
MsG0280008327.01.T02 AT1G72730 84.455 431 50 1 9 439 1 414 0.0 754
MsG0280008327.01.T02 AT3G13920 93.490 384 25 0 56 439 19 402 0.0 748
MsG0280008327.01.T02 AT3G13920 87.805 410 29 2 9 417 1 390 0.0 734
MsG0280008327.01.T02 AT3G13920 87.805 410 29 2 9 417 5 394 0.0 734
MsG0280008327.01.T02 AT3G19760 65.416 373 129 0 67 439 36 408 0.0 518
MsG0280008327.01.T02 AT1G51380 59.621 369 149 0 67 435 23 391 2.77e-165 471
MsG0280008327.01.T02 AT1G51380 59.524 252 102 0 67 318 23 274 1.74e-109 324
MsG0280008327.01.T02 AT3G61240 40.000 370 220 2 66 435 124 491 3.67e-91 285
MsG0280008327.01.T02 AT3G61240 40.000 370 220 2 66 435 124 491 3.67e-91 285
MsG0280008327.01.T02 AT4G00660 39.189 370 223 2 66 435 131 498 1.48e-89 281
MsG0280008327.01.T02 AT4G00660 39.189 370 223 2 66 435 131 498 1.48e-89 281
MsG0280008327.01.T02 AT2G45810 40.217 368 218 2 66 433 154 519 2.11e-89 281
MsG0280008327.01.T02 AT1G51380 56.872 211 91 0 67 277 23 233 3.74e-83 258
MsG0280008327.01.T02 AT1G51380 56.872 211 91 0 67 277 23 233 4.98e-83 258
MsG0280008327.01.T02 AT5G11170 39.946 368 215 6 73 435 53 419 1.80e-78 250
MsG0280008327.01.T02 AT5G11200 39.946 368 215 6 73 435 53 419 1.80e-78 250
MsG0280008327.01.T02 AT5G11170 39.466 337 198 6 104 435 1 336 1.81e-70 226
MsG0280008327.01.T02 AT5G11200 35.941 409 215 7 73 435 53 460 4.83e-70 229
MsG0280008327.01.T02 AT3G53110 35.338 399 232 11 59 433 81 477 2.13e-69 228
MsG0280008327.01.T02 AT5G26742 36.458 384 224 9 71 439 107 485 1.79e-65 223
MsG0280008327.01.T02 AT5G26742 36.458 384 224 9 71 439 107 485 1.82e-65 223
MsG0280008327.01.T02 AT5G26742 37.709 358 203 9 97 439 40 392 4.21e-65 221
MsG0280008327.01.T02 AT3G22310 35.372 376 230 6 71 437 121 492 7.19e-65 219
MsG0280008327.01.T02 AT3G22310 35.372 376 230 6 71 437 121 492 9.59e-65 219
MsG0280008327.01.T02 AT3G22330 35.372 376 230 6 71 437 109 480 1.35e-64 219
MsG0280008327.01.T02 AT2G33730 34.837 399 229 6 55 423 297 694 5.93e-64 219
MsG0280008327.01.T02 AT5G63120 34.656 378 241 2 68 439 167 544 2.90e-63 214
MsG0280008327.01.T02 AT1G55150 34.146 369 234 3 67 429 125 490 3.44e-63 213
MsG0280008327.01.T02 AT1G55150 34.146 369 234 3 67 429 100 465 3.85e-63 212
MsG0280008327.01.T02 AT1G77030 31.989 372 245 4 68 433 30 399 5.14e-59 207
MsG0280008327.01.T02 AT5G60990 32.225 391 251 3 62 439 5 394 6.68e-58 197
MsG0280008327.01.T02 AT3G01540 35.526 380 234 8 67 438 159 535 7.90e-58 201
MsG0280008327.01.T02 AT5G14610 33.333 378 245 4 67 438 170 546 8.11e-58 201
MsG0280008327.01.T02 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T02 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T02 AT3G01540 35.526 380 234 8 67 438 159 535 8.81e-58 200
MsG0280008327.01.T02 AT5G14610 33.333 378 245 4 67 438 162 538 9.75e-58 201
MsG0280008327.01.T02 AT5G14610 33.333 378 245 4 67 438 162 538 1.11e-57 201
MsG0280008327.01.T02 AT1G16280 33.795 361 234 2 67 422 59 419 3.33e-57 196
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 197 571 6.94e-57 201
MsG0280008327.01.T02 AT3G58570 33.083 399 240 7 59 432 136 532 9.29e-57 198
MsG0280008327.01.T02 AT2G47330 33.594 384 238 8 67 438 229 607 1.56e-56 199
MsG0280008327.01.T02 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T02 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T02 AT3G58510 32.216 388 239 7 66 432 151 535 1.65e-56 197
MsG0280008327.01.T02 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T02 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T02 AT2G42520 33.167 401 237 9 59 432 149 545 1.76e-56 197
MsG0280008327.01.T02 AT3G06480 32.750 400 258 5 47 438 416 812 3.25e-56 201
MsG0280008327.01.T02 AT4G16630 34.400 375 237 4 57 422 155 529 2.32e-55 196
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT1G20920 34.127 378 235 6 72 438 535 909 7.09e-55 197
MsG0280008327.01.T02 AT5G14610 30.266 413 259 5 32 438 18 407 1.37e-54 189
MsG0280008327.01.T02 AT5G14610 30.266 413 259 5 32 438 18 407 1.37e-54 189
MsG0280008327.01.T02 AT5G14610 30.993 413 276 5 32 438 197 606 1.76e-54 193
MsG0280008327.01.T02 AT3G02065 32.877 365 232 5 67 420 111 473 3.85e-54 188
MsG0280008327.01.T02 AT3G02065 32.877 365 232 5 67 420 111 473 3.85e-54 188
MsG0280008327.01.T02 AT4G33370 30.713 407 259 9 48 438 83 482 8.17e-54 188
MsG0280008327.01.T02 AT5G51280 30.670 388 250 7 67 438 147 531 1.77e-53 188
MsG0280008327.01.T02 AT1G28180 34.078 358 213 7 89 436 5 349 1.55e-51 178
MsG0280008327.01.T02 AT1G31970 32.713 376 235 7 67 429 117 487 2.39e-50 179
MsG0280008327.01.T02 AT3G18600 31.842 380 249 7 67 438 90 467 3.31e-50 179
MsG0280008327.01.T02 AT3G02065 33.233 331 208 5 101 420 8 336 4.97e-49 171
MsG0280008327.01.T02 AT1G12770 28.500 400 224 6 67 406 111 508 6.78e-49 175
MsG0280008327.01.T02 AT1G12770 28.500 400 224 6 67 406 111 508 6.78e-49 175
MsG0280008327.01.T02 AT3G09720 30.541 370 251 4 72 438 147 513 7.34e-48 172
MsG0280008327.01.T02 AT3G09720 30.541 370 251 4 72 438 147 513 7.34e-48 172
MsG0280008327.01.T02 AT3G09620 32.440 373 213 7 72 435 403 745 2.26e-47 175
MsG0280008327.01.T02 AT3G09620 32.440 373 213 7 72 435 402 744 2.37e-47 175
MsG0280008327.01.T02 AT5G65900 31.367 373 245 6 67 430 155 525 9.60e-46 168
MsG0280008327.01.T02 AT5G62190 31.250 368 229 8 81 431 111 471 7.81e-44 163
MsG0280008327.01.T02 AT5G63120 34.091 308 197 2 68 369 167 474 1.34e-43 159
MsG0280008327.01.T02 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T02 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T02 AT5G63120 34.091 308 197 2 68 369 167 474 1.59e-43 159
MsG0280008327.01.T02 AT5G05450 29.973 367 230 8 73 414 23 387 5.96e-42 157
MsG0280008327.01.T02 AT5G14610 31.307 329 219 4 67 389 170 497 6.98e-41 152
MsG0280008327.01.T02 AT1G71370 30.028 353 229 8 73 409 23 373 8.04e-41 153
MsG0280008327.01.T02 AT3G06480 30.882 340 224 5 47 378 416 752 1.28e-39 152
MsG0280008327.01.T02 AT5G63630 30.027 373 242 7 68 421 56 428 1.97e-39 149
MsG0280008327.01.T02 AT5G08620 29.948 384 228 9 68 421 82 454 5.54e-38 145
MsG0280008327.01.T02 AT5G63630 30.027 373 242 7 68 421 250 622 6.01e-38 146
MsG0280008327.01.T02 AT2G07750 27.295 403 252 11 61 433 368 759 2.98e-37 145
MsG0280008327.01.T02 AT5G08610 29.765 383 230 9 68 421 384 756 3.42e-37 145
MsG0280008327.01.T02 AT5G11200 38.938 226 124 5 73 293 53 269 3.59e-35 136
MsG0280008327.01.T02 AT5G11200 38.506 174 104 3 264 435 306 478 3.27e-30 122
MsG0280008327.01.T02 AT1G63250 27.047 403 253 10 61 433 321 712 4.04e-35 139
MsG0280008327.01.T02 AT4G34910 26.034 411 247 8 67 423 47 454 9.60e-34 134
MsG0280008327.01.T02 AT5G54910 28.084 381 249 11 58 422 64 435 3.01e-33 133
MsG0280008327.01.T02 AT2G40700 25.676 444 249 12 67 429 31 474 1.87e-32 130
MsG0280008327.01.T02 AT5G19210 27.456 397 228 12 75 428 85 464 2.21e-32 128
MsG0280008327.01.T02 AT4G09730 25.515 388 253 8 63 422 109 488 1.51e-30 124
MsG0280008327.01.T02 AT1G71280 28.435 313 182 10 73 371 24 308 2.46e-27 112
MsG0280008327.01.T02 AT3G06980 28.684 380 229 14 67 409 375 749 5.29e-27 114
MsG0280008327.01.T02 AT4G15850 25.648 386 211 13 105 420 74 453 2.61e-26 111
MsG0280008327.01.T02 AT1G71280 28.435 313 182 10 73 371 24 308 3.59e-26 110
MsG0280008327.01.T02 AT3G16840 32.995 197 108 5 65 237 189 385 2.62e-20 94.4
MsG0280008327.01.T02 AT3G16840 32.995 197 108 5 65 237 190 386 2.63e-20 94.4
MsG0280008327.01.T02 AT5G19210 25.697 323 180 11 149 428 2 307 5.40e-18 84.7
MsG0280008327.01.T02 AT5G19210 25.697 323 180 11 149 428 2 307 5.40e-18 84.7
MsG0280008327.01.T02 AT1G28180 37.398 123 60 3 89 203 5 118 1.69e-13 67.4

Find 73 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAATGTCCCTAGTATTT+TGG 0.210988 2:+29327763 None:intergenic
GTTGGATGTGTTTGTTTATT+GGG 0.211604 2:-29327129 MsG0280008327.01.T01:three_prime_UTR
CGTTGGATGTGTTTGTTTAT+TGG 0.222272 2:-29327130 MsG0280008327.01.T01:three_prime_UTR
AATTACTACACCTATTAAAA+AGG 0.284543 2:+29327345 None:intergenic
ATACAACAAATGGGGCAAAA+AGG 0.311464 2:+29327391 None:intergenic
TTTGATAACTACCGATCTTC+TGG 0.320168 2:-29327709 MsG0280008327.01.T01:CDS
TCAACACATTGTAGAACTTC+TGG 0.325013 2:+29327523 None:intergenic
TAAAACAGAAATACAACAAA+TGG 0.332402 2:+29327381 None:intergenic
TGATGTTCAGCAAGTGTCTT+TGG 0.336264 2:-29327676 MsG0280008327.01.T01:CDS
TTTCTTCCATCATTACTTAG+AGG 0.353720 2:-29327454 MsG0280008327.01.T01:three_prime_UTR
CTGTGATCTTTATGAGACTT+TGG 0.355425 2:-29327895 MsG0280008327.01.T01:CDS
GTCAAAGGTTACATAAGTTA+TGG 0.381297 2:-29327086 MsG0280008327.01.T01:three_prime_UTR
AATAATATTGTGCAGCAATC+AGG 0.388150 2:+29327035 None:intergenic
ATCATGCGTGAATTCCGTTC+TGG 0.390799 2:-29327744 MsG0280008327.01.T01:CDS
GAATGCATTATTGTCTGAAT+TGG 0.400654 2:-29327271 MsG0280008327.01.T01:three_prime_UTR
ACTCCGACTTGAATCTTAGA+TGG 0.408502 2:+29328074 None:intergenic
AAAACAGAAATACAACAAAT+GGG 0.412064 2:+29327382 None:intergenic
ATCATTACTTAGAGGGAAGT+TGG 0.426487 2:-29327446 MsG0280008327.01.T01:three_prime_UTR
CTTGTGATCTCAAGTGCCTC+AGG 0.456300 2:+29328032 None:intergenic
ATTGGTCGTAGTGGAAGGTT+TGG 0.459303 2:-29327606 MsG0280008327.01.T01:CDS
GAGACATGGACCAAAATACT+AGG 0.463229 2:-29327773 MsG0280008327.01.T01:CDS
GATAGTTCTCAGGCTGTGTT+GGG 0.470642 2:+29327637 None:intergenic
AACTTCCCTCTAAGTAATGA+TGG 0.477500 2:+29327448 None:intergenic
GTTCTACAATGTGTTGATTG+AGG 0.485517 2:-29327517 MsG0280008327.01.T01:CDS
GCGTGATGAGCTCACCTTGG+AGG 0.488852 2:-29327973 MsG0280008327.01.T01:CDS
TCACAGAAGTTCAGCAACAT+TGG 0.492163 2:+29327485 None:intergenic
CAGCCAGTCAACCTTTCGTC+TGG 0.496367 2:+29327842 None:intergenic
ACACCAGACGAAAGGTTGAC+TGG 0.497320 2:-29327845 MsG0280008327.01.T01:CDS
TTGGATGTGTTTGTTTATTG+GGG 0.499468 2:-29327128 MsG0280008327.01.T01:three_prime_UTR
ATTGCAAGTACTTATCACTT+AGG 0.507302 2:+29327297 None:intergenic
AATAAACAAACACATCCAAC+GGG 0.514935 2:+29327132 None:intergenic
GAATCTTAGATGGCAACAGC+TGG 0.517992 2:+29328084 None:intergenic
CTCTGCTACAATGCCTCCTG+AGG 0.521626 2:-29328048 MsG0280008327.01.T01:CDS
GAGAACTATCTCCATCGTAT+TGG 0.523557 2:-29327624 MsG0280008327.01.T01:CDS
AGATAGTTCTCAGGCTGTGT+TGG 0.525373 2:+29327636 None:intergenic
TTCTTCCATCATTACTTAGA+GGG 0.526743 2:-29327453 MsG0280008327.01.T01:three_prime_UTR
ATCGTATTGGTCGTAGTGGA+AGG 0.529668 2:-29327611 MsG0280008327.01.T01:CDS
AGATGACTCGATTCGGTCAA+AGG 0.538285 2:-29327101 MsG0280008327.01.T01:three_prime_UTR
CTCCATCGTATTGGTCGTAG+TGG 0.541717 2:-29327615 MsG0280008327.01.T01:CDS
GTCGTAGTGGAAGGTTTGGA+AGG 0.547854 2:-29327602 MsG0280008327.01.T01:CDS
CGTGATGAGCTCACCTTGGA+GGG 0.552554 2:-29327972 MsG0280008327.01.T01:CDS
CAATAAACAAACACATCCAA+CGG 0.554551 2:+29327131 None:intergenic
ATACGATGGAGATAGTTCTC+AGG 0.557654 2:+29327627 None:intergenic
CTCAGCAACACACGGAGACA+TGG 0.558453 2:-29327787 MsG0280008327.01.T01:CDS
AGTGGAAGGTTTGGAAGGAA+AGG 0.560979 2:-29327597 MsG0280008327.01.T01:CDS
CTGAGGCACTTGAGATCACA+AGG 0.563772 2:-29328031 MsG0280008327.01.T01:CDS
AAGTTGGTTTCTGAGTTAAG+TGG 0.564360 2:-29327430 MsG0280008327.01.T01:three_prime_UTR
GCTGTATCGCTGGTACCCGT+TGG 0.566336 2:-29327147 MsG0280008327.01.T01:three_prime_UTR
TTATGTCAACGTTGATAAGG+AGG 0.566533 2:-29327937 MsG0280008327.01.T01:CDS
TCAACGTTGATAAGGAGGAA+TGG 0.577711 2:-29327932 MsG0280008327.01.T01:CDS
CGCTTCACAAGAATCCTCAC+AGG 0.579557 2:+29327993 None:intergenic
TTGCTGAGACAGTGTGGTCA+CGG 0.580925 2:+29327802 None:intergenic
TGTAAACAAAGCTGTATCGC+TGG 0.586590 2:-29327157 MsG0280008327.01.T01:three_prime_UTR
TGGATGTGTTTGTTTATTGG+GGG 0.589577 2:-29327127 MsG0280008327.01.T01:three_prime_UTR
AGAAGTTCAGCAACATTGGA+AGG 0.591345 2:+29327489 None:intergenic
GGATGTGTTTGTTTATTGGG+GGG 0.594918 2:-29327126 MsG0280008327.01.T01:three_prime_UTR
ATCGGTAGTTATCAAAACAC+GGG 0.610300 2:+29327716 None:intergenic
CACACTGTCTCAGCAACACA+CGG 0.611599 2:-29327795 MsG0280008327.01.T01:CDS
GATCGGTAGTTATCAAAACA+CGG 0.623883 2:+29327715 None:intergenic
AGACATGGACCAAAATACTA+GGG 0.628384 2:-29327772 MsG0280008327.01.T01:CDS
AATACCACGAGCCAGAAGAT+CGG 0.631247 2:+29327698 None:intergenic
TTCCACTACGACCAATACGA+TGG 0.638034 2:+29327613 None:intergenic
GTGATCTCAAGTGCCTCAGG+AGG 0.642550 2:+29328035 None:intergenic
ACTACCGATCTTCTGGCTCG+TGG 0.651230 2:-29327702 MsG0280008327.01.T01:CDS
AAACAGAAATACAACAAATG+GGG 0.652592 2:+29327383 None:intergenic
AAACTGCTTGATACCCTCCA+AGG 0.661421 2:+29327959 None:intergenic
TTGCCATCTAAGATTCAAGT+CGG 0.662032 2:-29328077 MsG0280008327.01.T01:CDS
AGTGATAAGTACTTGCAATG+TGG 0.663450 2:-29327293 MsG0280008327.01.T01:three_prime_UTR
TATCACTTAGGATGTTCAGA+CGG 0.669632 2:+29327309 None:intergenic
GAAGCGTGATGAGCTCACCT+TGG 0.671691 2:-29327976 MsG0280008327.01.T01:CDS
AAACACGGGAAGATCCAGAA+CGG 0.712720 2:+29327730 None:intergenic
CGTGTGTTGCTGAGACAGTG+TGG 0.721187 2:+29327796 None:intergenic
AGTTCATGAACAAACCTGTG+AGG 0.726622 2:-29328007 MsG0280008327.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAGATATTTGTATAA+TGG - Chr2:29327277-29327296 MsG0280008327.01.T01:three_prime_UTR 10.0%
!! TATTGTTAAAAAACAAATTA+AGG - Chr2:29328911-29328930 MsG0280008327.01.T01:CDS 10.0%
!!! TAATTTGATAATAATTTGAT+TGG - Chr2:29327058-29327077 MsG0280008327.01.T02:three_prime_UTR 10.0%
!!! TTCTTTATAATTTTTGAAAT+TGG - Chr2:29328006-29328025 MsG0280008327.01.T01:CDS 10.0%
!! AAGAATTAAAATGTTATTGT+TGG - Chr2:29327882-29327901 MsG0280008327.01.T01:CDS 15.0%
!! AGAATTAAAATGTTATTGTT+GGG - Chr2:29327883-29327902 MsG0280008327.01.T01:CDS 15.0%
!! CAATAATATTACTATTTACT+GGG + Chr2:29329305-29329324 None:intergenic 15.0%
!! TGGTTAAAAAAATTAAAGAT+TGG + Chr2:29327832-29327851 None:intergenic 15.0%
!! TTTCTTAATGGAAAATATTA+AGG - Chr2:29328790-29328809 MsG0280008327.01.T01:intron 15.0%
!!! AATATATTTCATTTTGAAAC+AGG + Chr2:29329106-29329125 None:intergenic 15.0%
!!! ATTTCTAAAAAATTAATCCT+CGG + Chr2:29329243-29329262 None:intergenic 15.0%
!!! TTTAATTTTTTTAACCAGAT+GGG - Chr2:29327835-29327854 MsG0280008327.01.T01:CDS 15.0%
!! AAAACAGAAATACAACAAAT+GGG + Chr2:29330207-29330226 None:intergenic 20.0%
!! AAATAAAAACAAAGCTATGA+CGG + Chr2:29327554-29327573 None:intergenic 20.0%
!! AATTACTACACCTATTAAAA+AGG + Chr2:29330244-29330263 None:intergenic 20.0%
!! ACAAATCAAACTAGTTATTA+AGG + Chr2:29328301-29328320 None:intergenic 20.0%
!! CAGATACAATACAAAATTTA+AGG + Chr2:29327919-29327938 None:intergenic 20.0%
!! CCAATAATATTACTATTTAC+TGG + Chr2:29329306-29329325 None:intergenic 20.0%
!! CCAGTAAATAGTAATATTAT+TGG - Chr2:29329303-29329322 MsG0280008327.01.T01:intron 20.0%
!! GTTAAAAAACAAATTAAGGT+GGG - Chr2:29328915-29328934 MsG0280008327.01.T01:CDS 20.0%
!! TAAAACAGAAATACAACAAA+TGG + Chr2:29330208-29330227 None:intergenic 20.0%
!! TAGATCTGAAAATAAAATGA+AGG + Chr2:29329473-29329492 None:intergenic 20.0%
!! TGTTAAAAAACAAATTAAGG+TGG - Chr2:29328914-29328933 MsG0280008327.01.T01:CDS 20.0%
!! TTATGTATCAATAAAAGACT+CGG + Chr2:29328261-29328280 None:intergenic 20.0%
!!! AAGTTTTTATAGTAAATGAG+AGG + Chr2:29328159-29328178 None:intergenic 20.0%
!!! ATATTAGTTGTTTGGTTTAT+TGG - Chr2:29327097-29327116 MsG0280008327.01.T01:three_prime_UTR 20.0%
!!! ATGCATACATTAATTCTTTT+AGG + Chr2:29329443-29329462 None:intergenic 20.0%
!!! CACTTTCTAAAATTTCTTAA+TGG - Chr2:29328778-29328797 MsG0280008327.01.T01:intron 20.0%
!!! CATCATATCTTTTATCTTTT+GGG - Chr2:29327172-29327191 MsG0280008327.01.T01:intron 20.0%
!!! CTTAAATTTTGTATTGTATC+TGG - Chr2:29327917-29327936 MsG0280008327.01.T01:CDS 20.0%
!!! CTTTAATTTTTTTAACCAGA+TGG - Chr2:29327834-29327853 MsG0280008327.01.T01:CDS 20.0%
!!! TTTAGAAATTGTTTGAAACA+TGG - Chr2:29329254-29329273 MsG0280008327.01.T01:CDS 20.0%
! AAAAGTAGAAATCGAACTTA+TGG + Chr2:29328048-29328067 None:intergenic 25.0%
! AAACAGAAATACAACAAATG+GGG + Chr2:29330206-29330225 None:intergenic 25.0%
! AAATAGGAAGCAAAACAAAA+CGG + Chr2:29327975-29327994 None:intergenic 25.0%
! AAATTAAAGATTGGTACAGA+AGG + Chr2:29327823-29327842 None:intergenic 25.0%
! AATAAAAACAAAGCTATGAC+GGG + Chr2:29327553-29327572 None:intergenic 25.0%
! ATGGGAATCTTAAATTTCTA+TGG + Chr2:29329008-29329027 None:intergenic 25.0%
! ATTTGTATAATGGTTGAAGT+TGG - Chr2:29327287-29327306 MsG0280008327.01.T01:three_prime_UTR 25.0%
! CAGGTTAAAAAATTATTCTC+TGG + Chr2:29329087-29329106 None:intergenic 25.0%
! CCAAAAGATAAAAGATATGA+TGG + Chr2:29327174-29327193 None:intergenic 25.0%
! GAAGGTAAATATTAGTTGTT+TGG - Chr2:29327089-29327108 MsG0280008327.01.T01:three_prime_UTR 25.0%
! TCAAAATCTTCAAGATTGAA+AGG + Chr2:29329205-29329224 None:intergenic 25.0%
! TTACATCAAAATGTTCGTAT+TGG - Chr2:29328695-29328714 MsG0280008327.01.T01:intron 25.0%
!! AATAATTTGATTGGTTGAGA+GGG - Chr2:29327067-29327086 MsG0280008327.01.T02:three_prime_UTR 25.0%
!! CAAAAACTTGCTTGTTAAAA+AGG + Chr2:29330360-29330379 None:intergenic 25.0%
!! CCATCATATCTTTTATCTTT+TGG - Chr2:29327171-29327190 MsG0280008327.01.T01:intron 25.0%
!! GAAAGTGTACAAAAATTAGA+AGG + Chr2:29328765-29328784 None:intergenic 25.0%
!! TAATAATTTGATTGGTTGAG+AGG - Chr2:29327066-29327085 MsG0280008327.01.T02:three_prime_UTR 25.0%
!! TATTCTTGTTTGTCTAACTT+CGG - Chr2:29327633-29327652 MsG0280008327.01.T01:CDS 25.0%
!! TTAAATCGTGTATTTTCCTT+TGG - Chr2:29327359-29327378 MsG0280008327.01.T01:three_prime_UTR 25.0%
!!! ACTAGTTTGATTTGTGTTTT+AGG - Chr2:29328306-29328325 MsG0280008327.01.T01:intron 25.0%
!!! TATGATAGTTTTGATGCTAT+GGG - Chr2:29327727-29327746 MsG0280008327.01.T01:CDS 25.0%
!!! TTCTGTTTTAAAACCTTGTT+TGG - Chr2:29330218-29330237 MsG0280008327.01.T01:intron 25.0%
!!! TTTTAGGACAATAAATCAGT+AGG + Chr2:29329427-29329446 None:intergenic 25.0%
AAAGTCATACAACATTAGCA+AGG + Chr2:29328200-29328219 None:intergenic 30.0%
AAGAAACAACCGTGATAAAT+AGG + Chr2:29327991-29328010 None:intergenic 30.0%
AAGGAAAACATGTTAACCAA+AGG + Chr2:29327378-29327397 None:intergenic 30.0%
AATAAACAAACACATCCAAC+GGG + Chr2:29330457-29330476 None:intergenic 30.0%
AATAATATTGTGCAGCAATC+AGG + Chr2:29330554-29330573 None:intergenic 30.0%
AATAGGAAGCAAAACAAAAC+GGG + Chr2:29327974-29327993 None:intergenic 30.0%
ACAGAAACAAGAACAATCTT+GGG + Chr2:29328083-29328102 None:intergenic 30.0%
AGGATATACTACGTAGAAAA+AGG + Chr2:29328139-29328158 None:intergenic 30.0%
ATAAAAACAAAGCTATGACG+GGG + Chr2:29327552-29327571 None:intergenic 30.0%
ATAGTACAAGACTGTGTTTA+AGG + Chr2:29329333-29329352 None:intergenic 30.0%
ATTGCAAGTACTTATCACTT+AGG + Chr2:29330292-29330311 None:intergenic 30.0%
CAATAAACAAACACATCCAA+CGG + Chr2:29330458-29330477 None:intergenic 30.0%
GAATGCATTATTGTCTGAAT+TGG - Chr2:29330315-29330334 MsG0280008327.01.T01:intron 30.0%
GGAATAGTTCCATTTATCAA+GGG - Chr2:29328360-29328379 MsG0280008327.01.T01:intron 30.0%
GTCAAAGGTTACATAAGTTA+TGG - Chr2:29330500-29330519 MsG0280008327.01.T01:intron 30.0%
GTTAACAAAAATGACACTCT+GGG + Chr2:29329723-29329742 None:intergenic 30.0%
GTTGGATGTGTTTGTTTATT+GGG - Chr2:29330457-29330476 MsG0280008327.01.T01:intron 30.0%
TACAGAAACAAGAACAATCT+TGG + Chr2:29328084-29328103 None:intergenic 30.0%
TAGTACAAGACTGTGTTTAA+GGG + Chr2:29329332-29329351 None:intergenic 30.0%
TGTTAACAAAAATGACACTC+TGG + Chr2:29329724-29329743 None:intergenic 30.0%
TTACTAAAGCATGCTTAGTT+TGG + Chr2:29327415-29327434 None:intergenic 30.0%
TTCTTCCATCATTACTTAGA+GGG - Chr2:29330133-29330152 MsG0280008327.01.T01:intron 30.0%
TTGGATGTGTTTGTTTATTG+GGG - Chr2:29330458-29330477 MsG0280008327.01.T01:intron 30.0%
TTGTGTAGTAAGGATAAAAG+TGG - Chr2:29328941-29328960 MsG0280008327.01.T01:CDS 30.0%
TTTCTTCCATCATTACTTAG+AGG - Chr2:29330132-29330151 MsG0280008327.01.T01:intron 30.0%
! AAACACAGTCTTGTACTATT+AGG - Chr2:29329334-29329353 MsG0280008327.01.T01:intron 30.0%
! AGTCTTGTACTATTAGGATT+AGG - Chr2:29329340-29329359 MsG0280008327.01.T01:intron 30.0%
! ATTCTTGTTTGTCTAACTTC+GGG - Chr2:29327634-29327653 MsG0280008327.01.T01:CDS 30.0%
! GTTTTATGTCAACGTTGATA+AGG - Chr2:29329646-29329665 MsG0280008327.01.T01:intron 30.0%
! GTTTTGCTTCCTATTTATCA+CGG - Chr2:29327979-29327998 MsG0280008327.01.T01:CDS 30.0%
! TAGTTGTTTGGTTTATTGGT+AGG - Chr2:29327101-29327120 MsG0280008327.01.T01:three_prime_UTR 30.0%
! TTAACATGTTTTCCTTGGAT+TGG - Chr2:29327382-29327401 MsG0280008327.01.T01:three_prime_UTR 30.0%
! TTTGGTTAACATGTTTTCCT+TGG - Chr2:29327377-29327396 MsG0280008327.01.T01:three_prime_UTR 30.0%
!! ACGAACATTTTGATGTAATC+TGG + Chr2:29328693-29328712 None:intergenic 30.0%
!! TGATAATGTCCCTAGTATTT+TGG + Chr2:29329826-29329845 None:intergenic 30.0%
!!! CTATGATAGTTTTGATGCTA+TGG - Chr2:29327726-29327745 MsG0280008327.01.T01:CDS 30.0%
!!! GATCTTTATTTTACAAACCG+AGG - Chr2:29329223-29329242 MsG0280008327.01.T01:CDS 30.0%
!!! GCTGAAGTAGTTTGATTTTT+TGG - Chr2:29330405-29330424 MsG0280008327.01.T01:intron 30.0%
AAATCTTCAAGATAGCTGAG+AGG + Chr2:29329392-29329411 None:intergenic 35.0%
AACGGGTATATTTCACAGTA+TGG + Chr2:29327957-29327976 None:intergenic 35.0%
AACTTCCCTCTAAGTAATGA+TGG + Chr2:29330141-29330160 None:intergenic 35.0%
ACATCAAGACCCTTGATAAA+TGG + Chr2:29328372-29328391 None:intergenic 35.0%
AGACATGGACCAAAATACTA+GGG - Chr2:29329814-29329833 MsG0280008327.01.T01:intron 35.0%
AGTGATAAGTACTTGCAATG+TGG - Chr2:29330293-29330312 MsG0280008327.01.T01:intron 35.0%
ATACAACAAATGGGGCAAAA+AGG + Chr2:29330198-29330217 None:intergenic 35.0%
ATCATTACTTAGAGGGAAGT+TGG - Chr2:29330140-29330159 MsG0280008327.01.T01:intron 35.0%
ATCGGTAGTTATCAAAACAC+GGG + Chr2:29329873-29329892 None:intergenic 35.0%
CCTATTAAAAAGGCCAAACA+AGG + Chr2:29330234-29330253 None:intergenic 35.0%
CGTTGGATGTGTTTGTTTAT+TGG - Chr2:29330456-29330475 MsG0280008327.01.T01:intron 35.0%
CTGTGATCTTTATGAGACTT+TGG - Chr2:29329691-29329710 MsG0280008327.01.T01:intron 35.0%
CTTCTTCACATCTTATGATG+AGG - Chr2:29327702-29327721 MsG0280008327.01.T01:CDS 35.0%
GATAAGAACAATGTTCCTAG+AGG + Chr2:29328860-29328879 None:intergenic 35.0%
GATCGGTAGTTATCAAAACA+CGG + Chr2:29329874-29329893 None:intergenic 35.0%
GGGAATAGTTCCATTTATCA+AGG - Chr2:29328359-29328378 MsG0280008327.01.T01:intron 35.0%
GGTATATTTCACAGTATGGA+AGG + Chr2:29327953-29327972 None:intergenic 35.0%
GTACTAGTAATCACATTCCT+AGG - Chr2:29328812-29328831 MsG0280008327.01.T01:intron 35.0%
TAAGTTCAAGCTCGAGAAAT+GGG + Chr2:29329026-29329045 None:intergenic 35.0%
TACAACAAATGGGGCAAAAA+GGG + Chr2:29330197-29330216 None:intergenic 35.0%
TATCACTTAGGATGTTCAGA+CGG + Chr2:29330280-29330299 None:intergenic 35.0%
TCAACACATTGTAGAACTTC+TGG + Chr2:29330066-29330085 None:intergenic 35.0%
TCGGTAGCAAAACTAAAATG+TGG - Chr2:29329170-29329189 MsG0280008327.01.T01:CDS 35.0%
TGGATGTGTTTGTTTATTGG+GGG - Chr2:29330459-29330478 MsG0280008327.01.T01:intron 35.0%
TTTGGCATTAATCCAATCCA+AGG + Chr2:29327397-29327416 None:intergenic 35.0%
! AAGTTGGTTTCTGAGTTAAG+TGG - Chr2:29330156-29330175 MsG0280008327.01.T01:intron 35.0%
! TGTTTGGTTTATTGGTAGGA+GGG - Chr2:29327105-29327124 MsG0280008327.01.T01:three_prime_UTR 35.0%
! TTATGTCAACGTTGATAAGG+AGG - Chr2:29329649-29329668 MsG0280008327.01.T01:intron 35.0%
! TTGCCATCTAAGATTCAAGT+CGG - Chr2:29329509-29329528 MsG0280008327.01.T01:intron 35.0%
! TTGTTTGGTTTATTGGTAGG+AGG - Chr2:29327104-29327123 MsG0280008327.01.T01:three_prime_UTR 35.0%
! TTTGATAACTACCGATCTTC+TGG - Chr2:29329877-29329896 MsG0280008327.01.T01:CDS 35.0%
! TTTTGTTAACACCAGACGAA+AGG - Chr2:29329733-29329752 MsG0280008327.01.T01:intron 35.0%
!! CCTTGTTTGGCCTTTTTAAT+AGG - Chr2:29330231-29330250 MsG0280008327.01.T01:intron 35.0%
!! GTTCTACAATGTGTTGATTG+AGG - Chr2:29330069-29330088 MsG0280008327.01.T01:intron 35.0%
!!! TTCTCGTGGTTTTAAAGATC+AGG - Chr2:29328737-29328756 MsG0280008327.01.T01:intron 35.0%
ACAACAAATGGGGCAAAAAG+GGG + Chr2:29330196-29330215 None:intergenic 40.0%
AGAAGTTCAGCAACATTGGA+AGG + Chr2:29330100-29330119 None:intergenic 40.0%
AGCACGAAAAAAATCCCATC+TGG + Chr2:29327852-29327871 None:intergenic 40.0%
AGGTGGGAAATTGTGTAGTA+AGG - Chr2:29328931-29328950 MsG0280008327.01.T01:CDS 40.0%
AGTTCATGAACAAACCTGTG+AGG - Chr2:29329579-29329598 MsG0280008327.01.T01:intron 40.0%
ATACGATGGAGATAGTTCTC+AGG + Chr2:29329962-29329981 None:intergenic 40.0%
ATGTTATTGTTGGGCTCTGT+TGG - Chr2:29327892-29327911 MsG0280008327.01.T01:CDS 40.0%
CAAAATGTTCGTATTGGACG+AGG - Chr2:29328701-29328720 MsG0280008327.01.T01:intron 40.0%
CTAAGTTCAAGCTCGAGAAA+TGG + Chr2:29329027-29329046 None:intergenic 40.0%
GAAACAAACCCTACTACTGT+CGG - Chr2:29329151-29329170 MsG0280008327.01.T01:CDS 40.0%
GAGAACTATCTCCATCGTAT+TGG - Chr2:29329962-29329981 MsG0280008327.01.T01:CDS 40.0%
GAGACATGGACCAAAATACT+AGG - Chr2:29329813-29329832 MsG0280008327.01.T01:intron 40.0%
GGATGTGTTTGTTTATTGGG+GGG - Chr2:29330460-29330479 MsG0280008327.01.T01:intron 40.0%
GGGTCTTGATGTTATACAAC+AGG - Chr2:29328380-29328399 MsG0280008327.01.T01:intron 40.0%
GTCATACAACATTAGCAAGG+TGG + Chr2:29328197-29328216 None:intergenic 40.0%
TCACAGAAGTTCAGCAACAT+TGG + Chr2:29330104-29330123 None:intergenic 40.0%
TCGAGCTTGAACTTAGAGTA+TGG - Chr2:29329031-29329050 MsG0280008327.01.T01:CDS 40.0%
TGAGTCTGTAGATGCATTGA+AGG + Chr2:29327666-29327685 None:intergenic 40.0%
TGATGTTCAGCAAGTGTCTT+TGG - Chr2:29329910-29329929 MsG0280008327.01.T01:CDS 40.0%
TGGAGATTATCTAGGTGTGA+AGG - Chr2:29328545-29328564 MsG0280008327.01.T01:intron 40.0%
TGTAAACAAAGCTGTATCGC+TGG - Chr2:29330429-29330448 MsG0280008327.01.T01:intron 40.0%
TTGCAAGAGAATCTTCTCAG+AGG - Chr2:29327751-29327770 MsG0280008327.01.T01:CDS 40.0%
! ACTCCGACTTGAATCTTAGA+TGG + Chr2:29329515-29329534 None:intergenic 40.0%
! ATTTGATTGGTTGAGAGGGA+AGG - Chr2:29327071-29327090 MsG0280008327.01.T01:three_prime_UTR 40.0%
! CAGTAGTAGGGTTTGTTTCA+AGG + Chr2:29329150-29329169 None:intergenic 40.0%
! GTTTGGTTTATTGGTAGGAG+GGG - Chr2:29327106-29327125 MsG0280008327.01.T01:three_prime_UTR 40.0%
! TCAACGTTGATAAGGAGGAA+TGG - Chr2:29329654-29329673 MsG0280008327.01.T01:intron 40.0%
! TTTTGCTACCGACAGTAGTA+GGG + Chr2:29329162-29329181 None:intergenic 40.0%
!! ATTCCTAGGTATGCTGTTTC+TGG - Chr2:29328826-29328845 MsG0280008327.01.T01:intron 40.0%
!! TTCCTAGGTATGCTGTTTCT+GGG - Chr2:29328827-29328846 MsG0280008327.01.T01:intron 40.0%
AAACACGGGAAGATCCAGAA+CGG + Chr2:29329859-29329878 None:intergenic 45.0%
AAACTGCTTGATACCCTCCA+AGG + Chr2:29329630-29329649 None:intergenic 45.0%
AATACCACGAGCCAGAAGAT+CGG + Chr2:29329891-29329910 None:intergenic 45.0%
AGATAGTTCTCAGGCTGTGT+TGG + Chr2:29329953-29329972 None:intergenic 45.0%
AGCATGTCAAATACACGTCC+AGG + Chr2:29328651-29328670 None:intergenic 45.0%
AGCCATCAGCTATTCAGCAA+CGG - Chr2:29328337-29328356 MsG0280008327.01.T01:intron 45.0%
AGCGGTGTTCATGTTGTTGT+TGG - Chr2:29328621-29328640 MsG0280008327.01.T01:intron 45.0%
AGTGGAAGGTTTGGAAGGAA+AGG - Chr2:29329989-29330008 MsG0280008327.01.T01:intron 45.0%
ATCATGCGTGAATTCCGTTC+TGG - Chr2:29329842-29329861 MsG0280008327.01.T01:CDS 45.0%
CATGTCAAATACACGTCCAG+GGG + Chr2:29328649-29328668 None:intergenic 45.0%
CGTGCACTTGGAGATTATCT+AGG - Chr2:29328537-29328556 MsG0280008327.01.T01:intron 45.0%
GAATCTTAGATGGCAACAGC+TGG + Chr2:29329505-29329524 None:intergenic 45.0%
GATAGTTCTCAGGCTGTGTT+GGG + Chr2:29329952-29329971 None:intergenic 45.0%
GATCAGCGCATTCTATCAAG+CGG - Chr2:29328603-29328622 MsG0280008327.01.T01:intron 45.0%
GCATGTCAAATACACGTCCA+GGG + Chr2:29328650-29328669 None:intergenic 45.0%
GTTATACAACAGGCTCAGTC+TGG - Chr2:29328390-29328409 MsG0280008327.01.T01:intron 45.0%
TCCTTTACTTCCTGCAGTCA+TGG - Chr2:29327452-29327471 MsG0280008327.01.T01:three_prime_UTR 45.0%
TTCCACTACGACCAATACGA+TGG + Chr2:29329976-29329995 None:intergenic 45.0%
TTCCCAGAAACAGCATACCT+AGG + Chr2:29328832-29328851 None:intergenic 45.0%
! ATCGTATTGGTCGTAGTGGA+AGG - Chr2:29329975-29329994 MsG0280008327.01.T01:intron 45.0%
! ATTGGTCGTAGTGGAAGGTT+TGG - Chr2:29329980-29329999 MsG0280008327.01.T01:intron 45.0%
! GTTTTGCTACCGACAGTAGT+AGG + Chr2:29329163-29329182 None:intergenic 45.0%
! TTTCTGGGAATTGCACCTCT+AGG - Chr2:29328842-29328861 MsG0280008327.01.T01:intron 45.0%
!! AGATGACTCGATTCGGTCAA+AGG - Chr2:29330485-29330504 MsG0280008327.01.T01:intron 45.0%
!! CTCAGAGGCATTTACGCATA+TGG - Chr2:29327766-29327785 MsG0280008327.01.T01:CDS 45.0%
AAGACTGCAACCTTCTGCTC+TGG - Chr2:29328420-29328439 MsG0280008327.01.T01:intron 50.0%
ACACCAGACGAAAGGTTGAC+TGG - Chr2:29329741-29329760 MsG0280008327.01.T01:intron 50.0%
AGACTGCAACCTTCTGCTCT+GGG - Chr2:29328421-29328440 MsG0280008327.01.T01:intron 50.0%
CAAGACCAAGGCTTGGCATT+CGG + Chr2:29328475-29328494 None:intergenic 50.0%
CACACTGTCTCAGCAACACA+CGG - Chr2:29329791-29329810 MsG0280008327.01.T01:intron 50.0%
CAGACTCACAACTGATGCAC+AGG - Chr2:29327678-29327697 MsG0280008327.01.T01:CDS 50.0%
CCATCAGCTATTCAGCAACG+GGG - Chr2:29328339-29328358 MsG0280008327.01.T01:intron 50.0%
CGCTTCACAAGAATCCTCAC+AGG + Chr2:29329596-29329615 None:intergenic 50.0%
CTGCAAAATCCCAGAGCAGA+AGG + Chr2:29328433-29328452 None:intergenic 50.0%
CTTGTGATCTCAAGTGCCTC+AGG + Chr2:29329557-29329576 None:intergenic 50.0%
GCATCAAACTGTGAACCCTC+TGG + Chr2:29327489-29327508 None:intergenic 50.0%
GCCATCAGCTATTCAGCAAC+GGG - Chr2:29328338-29328357 MsG0280008327.01.T01:intron 50.0%
GCCATGACTGCAGGAAGTAA+AGG + Chr2:29327456-29327475 None:intergenic 50.0%
GCTGATGAGATGCTTTCTCG+TGG - Chr2:29328723-29328742 MsG0280008327.01.T01:intron 50.0%
GCTTGCTCAGCAGATTGAGA+AGG - Chr2:29328509-29328528 MsG0280008327.01.T01:intron 50.0%
GGGGGATAGATGACTCGATT+CGG - Chr2:29330478-29330497 MsG0280008327.01.T01:intron 50.0%
TTACTTCCTGCAGTCATGGC+AGG - Chr2:29327456-29327475 MsG0280008327.01.T01:three_prime_UTR 50.0%
TTGCTGAGACAGTGTGGTCA+CGG + Chr2:29329787-29329806 None:intergenic 50.0%
! AACAGGCTCAGTCTGGAACA+GGG - Chr2:29328397-29328416 MsG0280008327.01.T01:intron 50.0%
! ATGTCTGGTTCAAAGGAGGG+TGG - Chr2:29327026-29327045 MsG0280008327.01.T02:three_prime_UTR 50.0%
! CATGTTGTTGTTGGTACCCC+TGG - Chr2:29328630-29328649 MsG0280008327.01.T01:intron 50.0%
! CTCCATCGTATTGGTCGTAG+TGG - Chr2:29329971-29329990 MsG0280008327.01.T01:intron 50.0%
! CTGAGGCACTTGAGATCACA+AGG - Chr2:29329555-29329574 MsG0280008327.01.T01:intron 50.0%
! GTCGTAGTGGAAGGTTTGGA+AGG - Chr2:29329984-29330003 MsG0280008327.01.T01:intron 50.0%
! GTGAAGGTGCATGCTTGTGT+CGG - Chr2:29328561-29328580 MsG0280008327.01.T01:intron 50.0%
AAGGTGCATGCTTGTGTCGG+AGG - Chr2:29328564-29328583 MsG0280008327.01.T01:intron 55.0%
ACGAGTAGGTGCCAAGACCA+AGG + Chr2:29328487-29328506 None:intergenic 55.0%
CAGCCAGTCAACCTTTCGTC+TGG + Chr2:29329747-29329766 None:intergenic 55.0%
CCCCGTTGCTGAATAGCTGA+TGG + Chr2:29328342-29328361 None:intergenic 55.0%
CGAATGCCAAGCCTTGGTCT+TGG - Chr2:29328473-29328492 MsG0280008327.01.T01:intron 55.0%
CGTGATGAGCTCACCTTGGA+GGG - Chr2:29329614-29329633 MsG0280008327.01.T01:intron 55.0%
CTCAGCAACACACGGAGACA+TGG - Chr2:29329799-29329818 MsG0280008327.01.T01:intron 55.0%
CTCTGCTACAATGCCTCCTG+AGG - Chr2:29329538-29329557 MsG0280008327.01.T01:intron 55.0%
GAAGCGTGATGAGCTCACCT+TGG - Chr2:29329610-29329629 MsG0280008327.01.T01:intron 55.0%
GAGAAGGTCATGCGTGCACT+TGG - Chr2:29328525-29328544 MsG0280008327.01.T01:intron 55.0%
GTGATCTCAAGTGCCTCAGG+AGG + Chr2:29329554-29329573 None:intergenic 55.0%
TAGGTGCCAAGACCAAGGCT+TGG + Chr2:29328482-29328501 None:intergenic 55.0%
TGCTGAGCAAGCTCACGAGT+AGG + Chr2:29328501-29328520 None:intergenic 55.0%
TGTGACCGAATGCCAAGCCT+TGG - Chr2:29328467-29328486 MsG0280008327.01.T01:intron 55.0%
! CAACAGGCTCAGTCTGGAAC+AGG - Chr2:29328396-29328415 MsG0280008327.01.T01:intron 55.0%
! CGTGTGTTGCTGAGACAGTG+TGG + Chr2:29329793-29329812 None:intergenic 55.0%
! GCGCTGATCTTCACGAACAC+TGG + Chr2:29328592-29328611 None:intergenic 55.0%
!! ACTACCGATCTTCTGGCTCG+TGG - Chr2:29329884-29329903 MsG0280008327.01.T01:CDS 55.0%
GCGTGATGAGCTCACCTTGG+AGG - Chr2:29329613-29329632 MsG0280008327.01.T01:intron 60.0%
GCTGTATCGCTGGTACCCGT+TGG - Chr2:29330439-29330458 MsG0280008327.01.T01:intron 60.0%
! ATGGCAGGCGTTGCACCAGA+GGG - Chr2:29327471-29327490 MsG0280008327.01.T01:exon 60.0%
GCAACGCCTGCCATGACTGC+AGG + Chr2:29327465-29327484 None:intergenic 65.0%
! CATGGCAGGCGTTGCACCAG+AGG - Chr2:29327470-29327489 MsG0280008327.01.T01:exon 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 29327026 29330582 29327026 ID=MsG0280008327.01;Name=MsG0280008327.01
Chr2 mRNA 29327068 29330582 29327068 ID=MsG0280008327.01.T01;Parent=MsG0280008327.01;Name=MsG0280008327.01.T01;_AED=0.33;_eAED=0.35;_QI=0|0.6|0.66|1|0.8|0.66|6|381|439
Chr2 exon 29327068 29327178 29327068 ID=MsG0280008327.01.T01:exon:6581;Parent=MsG0280008327.01.T01
Chr2 exon 29327215 29328120 29327215 ID=MsG0280008327.01.T01:exon:6580;Parent=MsG0280008327.01.T01
Chr2 CDS 29330561 29330582 29330561 ID=MsG0280008327.01.T01:cds;Parent=MsG0280008327.01.T01
Chr2 CDS 29330070 29330139 29330070 ID=MsG0280008327.01.T01:cds;Parent=MsG0280008327.01.T01
Chr2 CDS 29329821 29329981 29329821 ID=MsG0280008327.01.T01:cds;Parent=MsG0280008327.01.T01
Chr2 CDS 29328850 29329280 29328850 ID=MsG0280008327.01.T01:cds;Parent=MsG0280008327.01.T01
Chr2 CDS 29327485 29328120 29327485 ID=MsG0280008327.01.T01:cds;Parent=MsG0280008327.01.T01
Chr2 three_prime_UTR 29327215 29327484 29327215 ID=MsG0280008327.01.T01:three_prime_utr;Parent=MsG0280008327.01.T01
Chr2 three_prime_UTR 29327068 29327178 29327068 ID=MsG0280008327.01.T01:three_prime_utr;Parent=MsG0280008327.01.T01
Chr2 mRNA 29327026 29330582 29327026 ID=MsG0280008327.01.T02;Parent=MsG0280008327.01;Name=MsG0280008327.01.T02;_AED=0.32;_eAED=0.34;_QI=0|0.5|0.6|1|1|1|5|459|439
Chr2 exon 29327026 29328120 29327026 ID=MsG0280008327.01.T02:exon:6582;Parent=MsG0280008327.01.T02
Chr2 CDS 29330561 29330582 29330561 ID=MsG0280008327.01.T02:cds;Parent=MsG0280008327.01.T02
Chr2 CDS 29330070 29330139 29330070 ID=MsG0280008327.01.T02:cds;Parent=MsG0280008327.01.T02
Chr2 CDS 29329821 29329981 29329821 ID=MsG0280008327.01.T02:cds;Parent=MsG0280008327.01.T02
Chr2 CDS 29328850 29329280 29328850 ID=MsG0280008327.01.T02:cds;Parent=MsG0280008327.01.T02
Chr2 CDS 29327485 29328120 29327485 ID=MsG0280008327.01.T02:cds;Parent=MsG0280008327.01.T02
Chr2 three_prime_UTR 29327026 29327484 29327026 ID=MsG0280008327.01.T02:three_prime_utr;Parent=MsG0280008327.01.T02
Gene Sequence

>MsG0280008327.01.T01

ATGTCTGGTTCAAAGGAGGGTGTCATGGCAGGCGTTGCACCAGAGGGTTCACAGTTTGATGCTAAGCAGTTTGATTCAAAAATGAATGAGTTTGTTACTATTCTTGTTTGTCTAACTTCGGGTACATACCTTCAATGCATCTACAGACTCACAACTGATGCACAGGACTTCTTCACATCTTATGATGAGGTCTATGATAGTTTTGATGCTATGGGCTTGCAAGAGAATCTTCTCAGAGGCATTTACGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAACGGGGAATAGTTCCATTTATCAAGGGTCTTGATGTTATACAACAGGCTCAGTCTGGAACAGGGAAGACTGCAACCTTCTGCTCTGGGATTTTGCAGCAACTTGACTACAGTGTGACCGAATGCCAAGCCTTGGTCTTGGCACCTACTCGTGAGCTTGCTCAGCAGATTGAGAAGGTCATGCGTGCACTTGGAGATTATCTAGGTGTGAAGGTGCATGCTTGTGTCGGAGGAACCAGTGTTCGTGAAGATCAGCGCATTCTATCAAGCGGTGTTCATGTTGTTGTTGGTACCCCTGGACGTGTATTTGACATGCTGCGCAGACAGTCGCTTCGACCAGATTACATCAAAATGTTCGTATTGGACGAGGCTGATGAGATGCTTTCTCGTGGTTTTAAAGATCAGATCTATGATATATTCCAGCTGTTGCCATCTAAGATTCAAGTCGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCACTTGAGATCACAAGGAAGTTCATGAACAAACCTGTGAGGATTCTTGTGAAGCGTGATGAGCTCACCTTGGAGGGTATCAAGCAGTTTTATGTCAACGTTGATAAGGAGGAATGGAAGCTCGACACACTCTGTGATCTTTATGAGACTTTGGCTATCACCCAGAGTGTCATTTTTGTTAACACCAGACGAAAGGTTGACTGGCTGACTGACAAGATGAGAAGCCGTGACCACACTGTCTCAGCAACACACGGAGACATGGACCAAAATACTAGGGACATTATCATGCGTGAATTCCGTTCTGGATCTTCCCGTGTTTTGATAACTACCGATCTTCTGGCTCGTGGTATTGATGTTCAGCAAGTGTCTTTGGTTATAAATTATGATCTCCCAACACAGCCTGAGAACTATCTCCATCGTATTGGTCGTAGTGGAAGGTTTGGAAGGAAAGGTGTTGCTATTAACTTCGTCACAACTGATGACGAAAGAATGCTGAGTGACATCCAGAAGTTCTACAATGTGTTGATTGAGGAGCTGCCTTCCAATGTTGCTGAACTTCTGTGA

>MsG0280008327.01.T02

ATGTCTGGTTCAAAGGAGGGTGTCATGGCAGGCGTTGCACCAGAGGGTTCACAGTTTGATGCTAAGCAGTTTGATTCAAAAATGAATGAGTTTGTTACTATTCTTGTTTGTCTAACTTCGGGTACATACCTTCAATGCATCTACAGACTCACAACTGATGCACAGGACTTCTTCACATCTTATGATGAGGTCTATGATAGTTTTGATGCTATGGGCTTGCAAGAGAATCTTCTCAGAGGCATTTACGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAACGGGGAATAGTTCCATTTATCAAGGGTCTTGATGTTATACAACAGGCTCAGTCTGGAACAGGGAAGACTGCAACCTTCTGCTCTGGGATTTTGCAGCAACTTGACTACAGTGTGACCGAATGCCAAGCCTTGGTCTTGGCACCTACTCGTGAGCTTGCTCAGCAGATTGAGAAGGTCATGCGTGCACTTGGAGATTATCTAGGTGTGAAGGTGCATGCTTGTGTCGGAGGAACCAGTGTTCGTGAAGATCAGCGCATTCTATCAAGCGGTGTTCATGTTGTTGTTGGTACCCCTGGACGTGTATTTGACATGCTGCGCAGACAGTCGCTTCGACCAGATTACATCAAAATGTTCGTATTGGACGAGGCTGATGAGATGCTTTCTCGTGGTTTTAAAGATCAGATCTATGATATATTCCAGCTGTTGCCATCTAAGATTCAAGTCGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCACTTGAGATCACAAGGAAGTTCATGAACAAACCTGTGAGGATTCTTGTGAAGCGTGATGAGCTCACCTTGGAGGGTATCAAGCAGTTTTATGTCAACGTTGATAAGGAGGAATGGAAGCTCGACACACTCTGTGATCTTTATGAGACTTTGGCTATCACCCAGAGTGTCATTTTTGTTAACACCAGACGAAAGGTTGACTGGCTGACTGACAAGATGAGAAGCCGTGACCACACTGTCTCAGCAACACACGGAGACATGGACCAAAATACTAGGGACATTATCATGCGTGAATTCCGTTCTGGATCTTCCCGTGTTTTGATAACTACCGATCTTCTGGCTCGTGGTATTGATGTTCAGCAAGTGTCTTTGGTTATAAATTATGATCTCCCAACACAGCCTGAGAACTATCTCCATCGTATTGGTCGTAGTGGAAGGTTTGGAAGGAAAGGTGTTGCTATTAACTTCGTCACAACTGATGACGAAAGAATGCTGAGTGACATCCAGAAGTTCTACAATGTGTTGATTGAGGAGCTGCCTTCCAATGTTGCTGAACTTCTGTGA

Protein sequence

>MsG0280008327.01.T01

MSGSKEGVMAGVAPEGSQFDAKQFDSKMNEFVTILVCLTSGTYLQCIYRLTTDAQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDIQKFYNVLIEELPSNVAELL*

>MsG0280008327.01.T02

MSGSKEGVMAGVAPEGSQFDAKQFDSKMNEFVTILVCLTSGTYLQCIYRLTTDAQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDIQKFYNVLIEELPSNVAELL*