AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380018060.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380018060.01.T02 MTR_3g118110 90.260 154 13 1 6 157 54 207 4.98e-98 283
MsG0380018060.01.T02 MTR_3g109260 75.000 132 30 1 16 147 1 129 7.75e-71 211
MsG0380018060.01.T02 MTR_3g118110 81.250 96 18 0 6 101 54 149 2.02e-50 160
MsG0380018060.01.T01 MTR_3g118100 85.470 117 7 3 1 117 1 107 1.28e-55 170
MsG0380018060.01.T01 MTR_3g118100 85.470 117 7 3 1 117 1 107 4.01e-55 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380018060.01.T02 AT1G02140 83.099 142 22 1 18 157 2 143 1.46e-85 249

Find 98 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGTCACAGCTTGACTTTC+TGG 0.027355 3:+103881693 MsG0380018060.01.T01:three_prime_UTR
TACATTAGGACTTATATTTA+AGG 0.159684 3:+103881966 MsG0380018060.01.T01:three_prime_UTR
CTTTCTCTTTCTGCTTCTGC+TGG 0.246256 3:+103879070 MsG0380018060.01.T01:five_prime_UTR
CAATGAATCTTCTTGAATAA+TGG 0.279902 3:-103880209 None:intergenic
CCACTAACCAGATGAATCTT+TGG 0.290343 3:-103880729 None:intergenic
TATCTGTGCTTAAGCAGTTT+TGG 0.314323 3:-103883803 None:intergenic
AGAAGATTCATTGCTTTAGA+AGG 0.326176 3:+103880219 MsG0380018060.01.T01:CDS
TGAATCTTTGGGATTGTTGT+AGG 0.326660 3:-103880717 None:intergenic
GGAACCGTTCTATCAATAAT+AGG 0.344648 3:+103879262 MsG0380018060.01.T01:CDS
TCCTTTACTACTTCCAAGAT+TGG 0.348725 3:+103883623 MsG0380018060.01.T02:CDS
TAAAAGATGCGAAGGCCTTC+AGG 0.353524 3:-103883677 None:intergenic
GATAGAACGGTTCCTTTGAT+TGG 0.354075 3:-103879253 None:intergenic
CAGGAACTTGAGATTGTTAT+GGG 0.355218 3:+103883587 MsG0380018060.01.T02:CDS
GTGTCACAGCTTGACTTTCT+GGG 0.362844 3:+103881694 MsG0380018060.01.T01:three_prime_UTR
TAGGATTGGCACTGTGCATT+TGG 0.363887 3:-103881729 None:intergenic
ATTCTGGTGGGACCTCAGTT+TGG 0.371991 3:+103881490 MsG0380018060.01.T01:three_prime_UTR
TCAGGAACTTGAGATTGTTA+TGG 0.374992 3:+103883586 MsG0380018060.01.T02:CDS
CAAGCTCAGCCACCGGAATC+TGG 0.379086 3:+103879198 MsG0380018060.01.T01:CDS
GAATTGCAATATCTTACATT+AGG 0.381475 3:+103881952 MsG0380018060.01.T01:three_prime_UTR
CGAAGTTACAAAATCACAAA+TGG 0.387457 3:-103881865 None:intergenic
CACTAACCAGATGAATCTTT+GGG 0.397232 3:-103880728 None:intergenic
CGACCAACACGGTCTGGTTC+AGG 0.414314 3:-103883563 None:intergenic
GAGATACTACGTTGGTCATA+AGG 0.416637 3:+103883258 MsG0380018060.01.T02:CDS
ATCAACAAGAGAACCAATCT+TGG 0.427300 3:-103883636 None:intergenic
ATAGAACGGTTCCTTTGATT+GGG 0.430840 3:-103879252 None:intergenic
ACCAGACCGTGTTGGTCGTC+AGG 0.432239 3:+103883568 MsG0380018060.01.T02:CDS
GTTGGTCATAAGGGTAAATT+CGG 0.435065 3:+103883268 MsG0380018060.01.T02:CDS
TTTCTCTTTCTGCTTCTGCT+GGG 0.448802 3:+103879071 MsG0380018060.01.T01:five_prime_UTR
TTTGGTATGCTTAAATTTGA+AGG 0.452213 3:-103883785 None:intergenic
CACTCATTGTTACAATTACA+AGG 0.452235 3:+103883746 MsG0380018060.01.T02:CDS
AAGAAGAGACTGAGAGTCAG+AGG 0.454007 3:+103879132 MsG0380018060.01.T01:five_prime_UTR
GTCCCACCAGAATACATAAC+TGG 0.456812 3:-103881480 None:intergenic
TCCTGACGACCAACACGGTC+TGG 0.460919 3:-103883569 None:intergenic
GAAAATAAGGACAAAATAGT+TGG 0.469040 3:-103882108 None:intergenic
TCAGTTCAGACTCCCTCATC+AGG 0.470456 3:+103881515 MsG0380018060.01.T01:three_prime_UTR
AACAATCCCAAAGATTCATC+TGG 0.471111 3:+103880722 MsG0380018060.01.T01:three_prime_UTR
ATAAACCTCCTTACGAATGA+TGG 0.480860 3:-103883368 None:intergenic
ACCAATCTTGGAAGTAGTAA+AGG 0.483775 3:-103883624 None:intergenic
ACAAATGGGTAGTCAAGTAA+AGG 0.483918 3:-103881850 None:intergenic
TAAATAAAGCTTACCTGATG+AGG 0.484449 3:-103881528 None:intergenic
GAAGAGGAAGCACTCGCAGC+TGG 0.484647 3:-103881670 None:intergenic
TACAAGTTCTCACAAACAAA+AGG 0.487305 3:-103880294 None:intergenic
CAAATGGGTAGTCAAGTAAA+GGG 0.492979 3:-103881849 None:intergenic
ACCACCACAGGACCAGATTC+CGG 0.497624 3:-103879210 None:intergenic
AGATACTACGTTGGTCATAA+GGG 0.498454 3:+103883259 MsG0380018060.01.T02:CDS
TGAAGGAGGATGATAACAAC+TGG 0.499238 3:+103883540 MsG0380018060.01.T02:CDS
AATAGGCGGAAATCATCATC+TGG 0.506410 3:+103879279 MsG0380018060.01.T01:CDS
ACTCACGATCACTAAGAAGC+TGG 0.511171 3:-103880263 None:intergenic
GCATAACGAAGCTTACCATC+TGG 0.517649 3:-103883319 None:intergenic
TCCGCCTATTATTGATAGAA+CGG 0.520342 3:-103879266 None:intergenic
ATCCATCATGTGCTGAAACT+AGG 0.524448 3:-103881748 None:intergenic
GAAGTTACAAAATCACAAAT+GGG 0.528232 3:-103881864 None:intergenic
TGAGCTTGAGCTTGAGCGTG+AGG 0.528242 3:-103879171 None:intergenic
TGTTGATCATCAGGATCAGT+AGG 0.531236 3:+103883200 MsG0380018060.01.T02:intron
ACAAAATAGTTGGTTCATGT+AGG 0.539542 3:-103882098 None:intergenic
AACATTCAAGTTACAGATCA+CGG 0.540516 3:+103880153 MsG0380018060.01.T01:CDS
GATCATCAGGATCAGTAGGA+TGG 0.543475 3:+103883204 MsG0380018060.01.T02:intron
TAGCGCTTCACCACCACCAC+AGG 0.546744 3:-103879222 None:intergenic
ATCCTAGTTTCAGCACATGA+TGG 0.552536 3:+103881746 MsG0380018060.01.T01:three_prime_UTR
AGTTCTCACAAACAAAAGGC+AGG 0.555510 3:-103880290 None:intergenic
AAATAAAGCTTACCTGATGA+GGG 0.555627 3:-103881527 None:intergenic
CGACACTCACGAAGAACAGC+AGG 0.558457 3:-103883397 None:intergenic
TCAACAACAACAGATTATGA+AGG 0.558662 3:+103883523 MsG0380018060.01.T02:intron
TTCTGAAATTCGAAAGAGGT+AGG 0.561245 3:-103881454 None:intergenic
GAGTTTGAGTTCCGTCCAGA+TGG 0.565284 3:+103883304 MsG0380018060.01.T02:CDS
CAAGATAGTAAAAGATGCGA+AGG 0.565769 3:-103883685 None:intergenic
ATCATCAGGATCAGTAGGAT+GGG 0.566097 3:+103883205 MsG0380018060.01.T02:intron
CGATACCATCATTCGTAAGG+AGG 0.567991 3:+103883363 MsG0380018060.01.T02:CDS
TCATGTGCTGAAACTAGGAT+TGG 0.568680 3:-103881743 None:intergenic
GTCAAGCTGTGACACAGAAG+AGG 0.569534 3:-103881686 None:intergenic
TCAAGCTCAAGCTCAGCCAC+CGG 0.571954 3:+103879191 MsG0380018060.01.T01:CDS
GGAATCTGGTCCTGTGGTGG+TGG 0.575807 3:+103879212 MsG0380018060.01.T01:CDS
AAACGATACCATCATTCGTA+AGG 0.579284 3:+103883360 MsG0380018060.01.T02:CDS
CTTGATCGATCAAACAGTGT+TGG 0.579556 3:+103880093 MsG0380018060.01.T01:CDS
TAGTTTCAGCACATGATGGA+TGG 0.583477 3:+103881750 MsG0380018060.01.T01:three_prime_UTR
GCTATGCTCCGCCCAATCAA+AGG 0.584395 3:+103879241 MsG0380018060.01.T01:CDS
CTCACGATCACTAAGAAGCT+GGG 0.587411 3:-103880262 None:intergenic
CAAAGCAGTGCTGATCCTGA+AGG 0.593679 3:+103883662 MsG0380018060.01.T02:CDS
GAACGGTTCCTTTGATTGGG+CGG 0.595000 3:-103879249 None:intergenic
GCCACCGGAATCTGGTCCTG+TGG 0.595031 3:+103879206 MsG0380018060.01.T01:CDS
AAACCAGTTATGTATTCTGG+TGG 0.598244 3:+103881477 MsG0380018060.01.T01:three_prime_UTR
GAGCTTGAGCTTGAGCGTGA+GGG 0.601515 3:-103879170 None:intergenic
TCAGCACATGATGGATGGCA+TGG 0.602398 3:+103881755 MsG0380018060.01.T01:three_prime_UTR
ACCGGAATCTGGTCCTGTGG+TGG 0.616133 3:+103879209 MsG0380018060.01.T01:CDS
ATTGCAATTCACACCTACAC+AGG 0.627927 3:-103881939 None:intergenic
AGAAGAGACTGAGAGTCAGA+GGG 0.632966 3:+103879133 MsG0380018060.01.T01:five_prime_UTR
AACGAAGCTTACCATCTGGA+CGG 0.634567 3:-103883315 None:intergenic
AACCAGTTATGTATTCTGGT+GGG 0.640003 3:+103881478 MsG0380018060.01.T01:three_prime_UTR
ACAACAACAGATTATGAAGG+AGG 0.642882 3:+103883526 MsG0380018060.01.T02:intron
GTTCTCACAAACAAAAGGCA+GGG 0.642966 3:-103880289 None:intergenic
AATATGTGTGACGCCTGTGT+AGG 0.649218 3:+103881926 MsG0380018060.01.T01:three_prime_UTR
CAAGTTCCTGACGACCAACA+CGG 0.649649 3:-103883574 None:intergenic
ACCGTTCTATCAATAATAGG+CGG 0.659459 3:+103879265 MsG0380018060.01.T01:CDS
TGGCCTGAACCAGACCGTGT+TGG 0.677826 3:+103883560 MsG0380018060.01.T02:CDS
ACCACAGGACCAGATTCCGG+TGG 0.684814 3:-103879207 None:intergenic
TCGTATTATTTCTGACAGCG+AGG 0.703758 3:+103883420 MsG0380018060.01.T02:CDS
AGGAACTTGAGATTGTTATG+GGG 0.708397 3:+103883588 MsG0380018060.01.T02:CDS
TCTGAACTGAGTCCAAACTG+AGG 0.739116 3:-103881502 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAGG+AGG - Chr3:103879925-103879944 None:intergenic 10.0%
!! AAAAAAAAGCAAAAAAAAAA+AGG - Chr3:103882136-103882155 None:intergenic 10.0%
!! AAATAAATTGTGATTTAAAA+TGG + Chr3:103882983-103883002 MsG0380018060.01.T02:intron 10.0%
!! ACAAAAAACAAAAAAAAAAA+AGG - Chr3:103880928-103880947 None:intergenic 10.0%
!! ATAAATAATAAATAAAGCAT+CGG - Chr3:103879414-103879433 None:intergenic 10.0%
!! CAACAAAAAAATAAAAATTA+AGG - Chr3:103883030-103883049 None:intergenic 10.0%
!! TAAAAAAAAAAATTAAGCTA+AGG - Chr3:103882194-103882213 None:intergenic 10.0%
!!! ATTCATTTTAAAAAAATAAG+TGG - Chr3:103882922-103882941 None:intergenic 10.0%
!! AAAATCATAAGATAAGAATA+TGG - Chr3:103882321-103882340 None:intergenic 15.0%
!! GTTATAAGCAATAATAAAAA+AGG - Chr3:103883498-103883517 None:intergenic 15.0%
!! AAAAAAAAAGGCTGAAAATA+AGG - Chr3:103882124-103882143 None:intergenic 20.0%
!! AAGATCATGTTAGATTTAAA+AGG - Chr3:103881619-103881638 None:intergenic 20.0%
!! AATAATAAAAAAGGAAAAGG+GGG - Chr3:103883489-103883508 None:intergenic 20.0%
!! AATAATCAAATTGGTTAACT+TGG - Chr3:103882223-103882242 None:intergenic 20.0%
!! AGCAATAATAAAAAAGGAAA+AGG - Chr3:103883492-103883511 None:intergenic 20.0%
!! ATAAATAATATACGCTCAAA+TGG - Chr3:103881324-103881343 None:intergenic 20.0%
!! CAATAATAAAAAAGGAAAAG+GGG - Chr3:103883490-103883509 None:intergenic 20.0%
!! GCAATAATAAAAAAGGAAAA+GGG - Chr3:103883491-103883510 None:intergenic 20.0%
!! TACATTAGGACTTATATTTA+AGG + Chr3:103881966-103881985 MsG0380018060.01.T01:three_prime_UTR 20.0%
!! TTATGTGCCTATAATTTATA+GGG - Chr3:103879621-103879640 None:intergenic 20.0%
!! TTCTATCAAATTATGTAGAT+CGG + Chr3:103880070-103880089 MsG0380018060.01.T01:intron 20.0%
!! TTGAGCGTATATTATTTATA+CGG + Chr3:103881325-103881344 MsG0380018060.01.T01:intron 20.0%
!!! AAATGGTATTTAGATTAGTT+AGG + Chr3:103883000-103883019 MsG0380018060.01.T02:intron 20.0%
!!! AATGGTATTTAGATTAGTTA+GGG + Chr3:103883001-103883020 MsG0380018060.01.T02:intron 20.0%
!!! GTTTTGATAATTTAAATGCA+TGG + Chr3:103882026-103882045 MsG0380018060.01.T01:three_prime_UTR 20.0%
!!! TTACATTGATTGAAGTAAAA+AGG - Chr3:103879556-103879575 None:intergenic 20.0%
!!! TTACTTTTTAATCATCTTTG+TGG + Chr3:103881250-103881269 MsG0380018060.01.T01:intron 20.0%
!!! TTTTTTGTTTTTTGTGTGTT+TGG + Chr3:103880933-103880952 MsG0380018060.01.T01:intron 20.0%
! AAACACTAATGAACTGTATA+AGG - Chr3:103881096-103881115 None:intergenic 25.0%
! AAGATAGAATTAGAGTTAGT+TGG - Chr3:103879519-103879538 None:intergenic 25.0%
! ACGAAAAAATACATTATCCT+AGG + Chr3:103882620-103882639 MsG0380018060.01.T02:intron 25.0%
! AGATAGAATTAGAGTTAGTT+GGG - Chr3:103879518-103879537 None:intergenic 25.0%
! ATAATAAAAAAGGAAAAGGG+GGG - Chr3:103883488-103883507 None:intergenic 25.0%
! CAATGAATCTTCTTGAATAA+TGG - Chr3:103880212-103880231 None:intergenic 25.0%
! CACTCTTTGAATAATCAAAT+TGG - Chr3:103882232-103882251 None:intergenic 25.0%
! CGAAAAAATACATTATCCTA+GGG + Chr3:103882621-103882640 MsG0380018060.01.T02:intron 25.0%
! CTTATGTGCCTATAATTTAT+AGG - Chr3:103879622-103879641 None:intergenic 25.0%
! GAAAATAAGGACAAAATAGT+TGG - Chr3:103882111-103882130 None:intergenic 25.0%
! GAAGTTACAAAATCACAAAT+GGG - Chr3:103881867-103881886 None:intergenic 25.0%
! GAATTGCAATATCTTACATT+AGG + Chr3:103881952-103881971 MsG0380018060.01.T01:three_prime_UTR 25.0%
! TAGTCAATTAAAGAAAGAAC+TGG - Chr3:103880962-103880981 None:intergenic 25.0%
! TATAGTTTCTAAATTGCTGT+TGG + Chr3:103881284-103881303 MsG0380018060.01.T01:intron 25.0%
! TGTATCATCATCCTAAATAA+TGG + Chr3:103879576-103879595 MsG0380018060.01.T01:intron 25.0%
! TTGACTAATTACTATAAGCT+TGG + Chr3:103880975-103880994 MsG0380018060.01.T01:intron 25.0%
! TTTGGTATGCTTAAATTTGA+AGG - Chr3:103883788-103883807 None:intergenic 25.0%
!! AAAGAGTGTAGGATATAATT+AGG + Chr3:103882244-103882263 MsG0380018060.01.T02:intron 25.0%
!! AACATTGTTGTTGTTGAAAA+GGG + Chr3:103882538-103882557 MsG0380018060.01.T02:intron 25.0%
!! AAGAATATGGTTCTATTGTA+AGG - Chr3:103882308-103882327 None:intergenic 25.0%
!! AGAATATGGTTCTATTGTAA+GGG - Chr3:103882307-103882326 None:intergenic 25.0%
!! ATAGTTTCTAAATTGCTGTT+GGG + Chr3:103881285-103881304 MsG0380018060.01.T01:intron 25.0%
!! CATTTGTGATTTTGTAACTT+CGG + Chr3:103881866-103881885 MsG0380018060.01.T01:three_prime_UTR 25.0%
!! CTTCATATTCTAGAAACAAA+TGG + Chr3:103882843-103882862 MsG0380018060.01.T02:intron 25.0%
!! TAAATTCGGACATGAATTTT+TGG + Chr3:103883282-103883301 MsG0380018060.01.T02:CDS 25.0%
!! TGTCTAATATTTAGTGTTGA+TGG + Chr3:103880798-103880817 MsG0380018060.01.T01:intron 25.0%
!! TTTGATTATTCAAAGAGTGT+AGG + Chr3:103882233-103882252 MsG0380018060.01.T02:intron 25.0%
!!! AAGGAACAACATATTTTAGT+TGG - Chr3:103881077-103881096 None:intergenic 25.0%
!!! GAACTATTAGTTTGTATTGT+TGG + Chr3:103879655-103879674 MsG0380018060.01.T01:intron 25.0%
!!! GAATCATTTCATAGTTTTAC+TGG - Chr3:103880879-103880898 None:intergenic 25.0%
AAAGAACTACAGAAATCATC+AGG - Chr3:103880358-103880377 None:intergenic 30.0%
AAATAAAGCTTACCTGATGA+GGG - Chr3:103881530-103881549 None:intergenic 30.0%
AACCACTTATGTTATGCATA+CGG - Chr3:103882778-103882797 None:intergenic 30.0%
AAGAACTACAGAAATCATCA+GGG - Chr3:103880357-103880376 None:intergenic 30.0%
AGAAACAAACAAAATAGAGC+AGG - Chr3:103880029-103880048 None:intergenic 30.0%
ATACAGTTCATTAGTGTTTG+AGG + Chr3:103881097-103881116 MsG0380018060.01.T01:intron 30.0%
ATCCAGTATTAGCAAAAAAC+CGG - Chr3:103882818-103882837 None:intergenic 30.0%
ATCCTATGCAAACTAATTGA+AGG - Chr3:103880432-103880451 None:intergenic 30.0%
ATTAGCAAAAAACCGGTTAA+TGG - Chr3:103882811-103882830 None:intergenic 30.0%
CAAATTTCATAGCATGGAAA+AGG - Chr3:103880774-103880793 None:intergenic 30.0%
CAACAGGTAATGTTAATCAA+TGG - Chr3:103880655-103880674 None:intergenic 30.0%
CACTCATTGTTACAATTACA+AGG + Chr3:103883746-103883765 MsG0380018060.01.T02:CDS 30.0%
CAGTTAAAATACGAAAAGAC+AGG - Chr3:103880558-103880577 None:intergenic 30.0%
CGAAGTTACAAAATCACAAA+TGG - Chr3:103881868-103881887 None:intergenic 30.0%
GAAAAACCAGTTATGTATTC+TGG + Chr3:103881474-103881493 MsG0380018060.01.T01:three_prime_UTR 30.0%
GAATACCATTACCAATATGT+TGG + Chr3:103879745-103879764 MsG0380018060.01.T01:intron 30.0%
GATGATTTCTGTAGTTCTTT+AGG + Chr3:103880358-103880377 MsG0380018060.01.T01:intron 30.0%
GGAACAATTAACGAAACAAA+AGG - Chr3:103880537-103880556 None:intergenic 30.0%
GTATTCAAATGCAATATCCA+TGG - Chr3:103882567-103882586 None:intergenic 30.0%
GTTAGATTTAAAAGGCAGAA+GGG - Chr3:103881611-103881630 None:intergenic 30.0%
TAAAGCCAACATATTGGTAA+TGG - Chr3:103879753-103879772 None:intergenic 30.0%
TAAATAAAGCTTACCTGATG+AGG - Chr3:103881531-103881550 None:intergenic 30.0%
TAATGAGTCTCAAATCTCAA+GGG - Chr3:103882712-103882731 None:intergenic 30.0%
TACAAGTTCTCACAAACAAA+AGG - Chr3:103880297-103880316 None:intergenic 30.0%
TACTATCACCACATTTAAGA+AGG - Chr3:103881374-103881393 None:intergenic 30.0%
TATGTGCTACATATACTCTT+AGG + Chr3:103881397-103881416 MsG0380018060.01.T01:intron 30.0%
TCAAATACTCCATGAAATCA+TGG + Chr3:103882683-103882702 MsG0380018060.01.T02:intron 30.0%
TCAACAACAACAGATTATGA+AGG + Chr3:103883523-103883542 MsG0380018060.01.T02:intron 30.0%
TGAACTACATCAAAACACTT+TGG - Chr3:103881190-103881209 None:intergenic 30.0%
TGTTAGATTTAAAAGGCAGA+AGG - Chr3:103881612-103881631 None:intergenic 30.0%
TTAATGAGTCTCAAATCTCA+AGG - Chr3:103882713-103882732 None:intergenic 30.0%
TTGTGAGAACTTGTATATGT+TGG + Chr3:103880302-103880321 MsG0380018060.01.T01:intron 30.0%
TTTCAACAACAACAATGTTC+AGG - Chr3:103882537-103882556 None:intergenic 30.0%
! AACATTCAAGTTACAGATCA+CGG + Chr3:103880153-103880172 MsG0380018060.01.T01:CDS 30.0%
! ACAAAATAGTTGGTTCATGT+AGG - Chr3:103882101-103882120 None:intergenic 30.0%
! ACATTGTTGTTGTTGAAAAG+GGG + Chr3:103882539-103882558 MsG0380018060.01.T02:intron 30.0%
! AGAAGATTCATTGCTTTAGA+AGG + Chr3:103880219-103880238 MsG0380018060.01.T01:CDS 30.0%
! CATCATCCTAAATAATGGAA+CGG + Chr3:103879581-103879600 MsG0380018060.01.T01:intron 30.0%
! CATCTTTTACTATCTTGTTC+AGG + Chr3:103883691-103883710 MsG0380018060.01.T02:CDS 30.0%
! GAACATTGTTGTTGTTGAAA+AGG + Chr3:103882537-103882556 MsG0380018060.01.T02:intron 30.0%
! GAACTTTTACATAGATCTGA+TGG - Chr3:103879853-103879872 None:intergenic 30.0%
! GATTGAGATATGCAGATTTT+AGG + Chr3:103880449-103880468 MsG0380018060.01.T01:intron 30.0%
! TGAGATTTGAAGTAGTTAGT+TGG - Chr3:103879491-103879510 None:intergenic 30.0%
! TTTTACTTGAGATACTACGT+TGG + Chr3:103883250-103883269 MsG0380018060.01.T02:CDS 30.0%
!! GATGGTATCGTTTTTGTAAT+TGG - Chr3:103883353-103883372 None:intergenic 30.0%
!! TAATAAATAAAGCATCGGAC+AGG - Chr3:103879409-103879428 None:intergenic 30.0%
!! TACCTTCAATTAGTTTGCAT+AGG + Chr3:103880427-103880446 MsG0380018060.01.T01:intron 30.0%
!!! ATATGCAGATTTTAGGACTT+AGG + Chr3:103880456-103880475 MsG0380018060.01.T01:intron 30.0%
!!! GTTTTTCTGAAATTCGAAAG+AGG - Chr3:103881461-103881480 None:intergenic 30.0%
AAAAACCGGTTAATGGTTGA+TGG - Chr3:103882804-103882823 None:intergenic 35.0%
AAACCAGTTATGTATTCTGG+TGG + Chr3:103881477-103881496 MsG0380018060.01.T01:three_prime_UTR 35.0%
AAACGATACCATCATTCGTA+AGG + Chr3:103883360-103883379 MsG0380018060.01.T02:CDS 35.0%
AACAATCCCAAAGATTCATC+TGG + Chr3:103880722-103880741 MsG0380018060.01.T01:three_prime_UTR 35.0%
AACCAGTTATGTATTCTGGT+GGG + Chr3:103881478-103881497 MsG0380018060.01.T01:three_prime_UTR 35.0%
AACCGTATGCATAACATAAG+TGG + Chr3:103882773-103882792 MsG0380018060.01.T02:intron 35.0%
AAGCTTCACATTCCACTATT+TGG + Chr3:103882439-103882458 MsG0380018060.01.T02:intron 35.0%
ACAAATGGGTAGTCAAGTAA+AGG - Chr3:103881853-103881872 None:intergenic 35.0%
ACAACAACAGATTATGAAGG+AGG + Chr3:103883526-103883545 MsG0380018060.01.T02:intron 35.0%
ACCAATCTTGGAAGTAGTAA+AGG - Chr3:103883627-103883646 None:intergenic 35.0%
ACCGTTCTATCAATAATAGG+CGG + Chr3:103879265-103879284 MsG0380018060.01.T01:CDS 35.0%
ACTGGGACCCTATAAATTAT+AGG + Chr3:103879611-103879630 MsG0380018060.01.T01:intron 35.0%
AGATACTACGTTGGTCATAA+GGG + Chr3:103883259-103883278 MsG0380018060.01.T02:CDS 35.0%
AGGAACTTGAGATTGTTATG+GGG + Chr3:103883588-103883607 MsG0380018060.01.T02:CDS 35.0%
AGTGCAGTACATACAAAACA+AGG + Chr3:103882736-103882755 MsG0380018060.01.T02:intron 35.0%
AGTTGGAGGAAAGCAAATAA+GGG - Chr3:103879474-103879493 None:intergenic 35.0%
AGTTTGTATTGTTGGATCAG+TGG + Chr3:103879663-103879682 MsG0380018060.01.T01:intron 35.0%
ATAAACCTCCTTACGAATGA+TGG - Chr3:103883371-103883390 None:intergenic 35.0%
ATAGAACGGTTCCTTTGATT+GGG - Chr3:103879255-103879274 None:intergenic 35.0%
ATCAACAAGAGAACCAATCT+TGG - Chr3:103883639-103883658 None:intergenic 35.0%
ATTGCATTATAGTGAGGAGT+GGG + Chr3:103880581-103880600 MsG0380018060.01.T01:intron 35.0%
ATTGCGATACTTACGACTTA+CGG + Chr3:103881032-103881051 MsG0380018060.01.T01:intron 35.0%
CAAATGGGTAGTCAAGTAAA+GGG - Chr3:103881852-103881871 None:intergenic 35.0%
CAACAACAATGTTCAGGTAT+TGG - Chr3:103882531-103882550 None:intergenic 35.0%
CAAGATAGTAAAAGATGCGA+AGG - Chr3:103883688-103883707 None:intergenic 35.0%
CACTAACCAGATGAATCTTT+GGG - Chr3:103880731-103880750 None:intergenic 35.0%
CAGGAACTTGAGATTGTTAT+GGG + Chr3:103883587-103883606 MsG0380018060.01.T02:CDS 35.0%
CAGTGACAAATTTCATAGCA+TGG - Chr3:103880780-103880799 None:intergenic 35.0%
CTGCTTATTGCATTATAGTG+AGG + Chr3:103880575-103880594 MsG0380018060.01.T01:intron 35.0%
GAGTGTAGGATATAATTAGG+AGG + Chr3:103882247-103882266 MsG0380018060.01.T02:intron 35.0%
GGAACCGTTCTATCAATAAT+AGG + Chr3:103879262-103879281 MsG0380018060.01.T01:CDS 35.0%
GTTGGTCATAAGGGTAAATT+CGG + Chr3:103883268-103883287 MsG0380018060.01.T02:CDS 35.0%
TAGTTGGAGGAAAGCAAATA+AGG - Chr3:103879475-103879494 None:intergenic 35.0%
TATCACCACATTTAAGAAGG+CGG - Chr3:103881371-103881390 None:intergenic 35.0%
TATTGCATTATAGTGAGGAG+TGG + Chr3:103880580-103880599 MsG0380018060.01.T01:intron 35.0%
TCAGGAACTTGAGATTGTTA+TGG + Chr3:103883586-103883605 MsG0380018060.01.T02:CDS 35.0%
TCCGCCTATTATTGATAGAA+CGG - Chr3:103879269-103879288 None:intergenic 35.0%
TCCTTTACTACTTCCAAGAT+TGG + Chr3:103883623-103883642 MsG0380018060.01.T02:CDS 35.0%
TCGCAGTCATATTAAACTCT+GGG + Chr3:103883146-103883165 MsG0380018060.01.T02:intron 35.0%
TTAACTCACGATAACAGTGT+TGG + Chr3:103879706-103879725 MsG0380018060.01.T01:intron 35.0%
TTATGTTATGCATACGGTTG+AGG - Chr3:103882772-103882791 None:intergenic 35.0%
TTGTACCATCAACCATTAAC+CGG + Chr3:103882796-103882815 MsG0380018060.01.T02:intron 35.0%
! CTAAATAATGGAACGGATCT+GGG + Chr3:103879588-103879607 MsG0380018060.01.T01:intron 35.0%
! GATTTGAAGTAGTTAGTTGG+AGG - Chr3:103879488-103879507 None:intergenic 35.0%
! TATCTGTGCTTAAGCAGTTT+TGG - Chr3:103883806-103883825 None:intergenic 35.0%
! TCTCTTTTTCTTGTTCGAGT+TGG - Chr3:103883102-103883121 None:intergenic 35.0%
!! CTCTTTTTCTTGTTCGAGTT+GGG - Chr3:103883101-103883120 None:intergenic 35.0%
!! GTTTTCAATCCATTGAGTTG+AGG + Chr3:103880850-103880869 MsG0380018060.01.T01:intron 35.0%
!! TGAATCTTTGGGATTGTTGT+AGG - Chr3:103880720-103880739 None:intergenic 35.0%
!! TGATCAAGGTCAGTTTGTTA+TGG - Chr3:103882493-103882512 None:intergenic 35.0%
!! TGGTAATGGTATTCAACTCA+AGG - Chr3:103879739-103879758 None:intergenic 35.0%
!! TTCTGAAATTCGAAAGAGGT+AGG - Chr3:103881457-103881476 None:intergenic 35.0%
!!! AACCGGTTTTTTGCTAATAC+TGG + Chr3:103882813-103882832 MsG0380018060.01.T02:intron 35.0%
AAGGTCAATTACTGCAACAG+TGG - Chr3:103880909-103880928 None:intergenic 40.0%
AATAGCCGCCTTCTTAAATG+TGG + Chr3:103881363-103881382 MsG0380018060.01.T01:intron 40.0%
AATAGGCGGAAATCATCATC+TGG + Chr3:103879279-103879298 MsG0380018060.01.T01:CDS 40.0%
ACCAACTATGATCCAATGGA+GGG + Chr3:103882401-103882420 MsG0380018060.01.T02:intron 40.0%
AGACAACAAAAATGAGCCCT+AGG - Chr3:103882640-103882659 None:intergenic 40.0%
AGATTTAAAAGGCAGAAGGG+AGG - Chr3:103881608-103881627 None:intergenic 40.0%
AGTAAGGGCTACAAAAGAAG+CGG + Chr3:103883061-103883080 MsG0380018060.01.T02:intron 40.0%
AGTTCTCACAAACAAAAGGC+AGG - Chr3:103880293-103880312 None:intergenic 40.0%
ATCATCAGGATCAGTAGGAT+GGG + Chr3:103883205-103883224 MsG0380018060.01.T02:intron 40.0%
ATCCATCATGTGCTGAAACT+AGG - Chr3:103881751-103881770 None:intergenic 40.0%
ATCCTAGTTTCAGCACATGA+TGG + Chr3:103881746-103881765 MsG0380018060.01.T01:three_prime_UTR 40.0%
ATGTGTGTGAGAGATGATCA+AGG - Chr3:103882507-103882526 None:intergenic 40.0%
ATTGCAATTCACACCTACAC+AGG - Chr3:103881942-103881961 None:intergenic 40.0%
ATTTAAAAGGCAGAAGGGAG+GGG - Chr3:103881606-103881625 None:intergenic 40.0%
ATTTATCTCCCATGAGACCA+TGG - Chr3:103879788-103879807 None:intergenic 40.0%
CAAGGGTTACCATGATTTCA+TGG - Chr3:103882695-103882714 None:intergenic 40.0%
CCAAAGATTCATCTGGTTAG+TGG + Chr3:103880729-103880748 MsG0380018060.01.T01:intron 40.0%
CCACTAACCAGATGAATCTT+TGG - Chr3:103880732-103880751 None:intergenic 40.0%
CCAGATCCGTTCCATTATTT+AGG - Chr3:103879590-103879609 None:intergenic 40.0%
CGCAGTCATATTAAACTCTG+GGG + Chr3:103883147-103883166 MsG0380018060.01.T02:intron 40.0%
CTCAAGATTTCCTCAACTCT+TGG - Chr3:103882599-103882618 None:intergenic 40.0%
CTCGCAGTCATATTAAACTC+TGG + Chr3:103883145-103883164 MsG0380018060.01.T02:intron 40.0%
CTTGATCGATCAAACAGTGT+TGG + Chr3:103880093-103880112 MsG0380018060.01.T01:CDS 40.0%
GAAGACCAACTATGATCCAA+TGG + Chr3:103882397-103882416 MsG0380018060.01.T02:intron 40.0%
GAAGGCTAAAGCCAACATAT+TGG - Chr3:103879759-103879778 None:intergenic 40.0%
GAGATACTACGTTGGTCATA+AGG + Chr3:103883258-103883277 MsG0380018060.01.T02:CDS 40.0%
GAGTTAATATGTGCCTTGGT+TGG - Chr3:103879693-103879712 None:intergenic 40.0%
GATAGAACGGTTCCTTTGAT+TGG - Chr3:103879256-103879275 None:intergenic 40.0%
GATTTAAAAGGCAGAAGGGA+GGG - Chr3:103881607-103881626 None:intergenic 40.0%
GCAGTCATATTAAACTCTGG+GGG + Chr3:103883148-103883167 MsG0380018060.01.T02:intron 40.0%
GCATAATTCACAGTGAGCAA+TGG + Chr3:103879974-103879993 MsG0380018060.01.T01:intron 40.0%
GCGTATGAATCTCCAAATAG+TGG - Chr3:103882454-103882473 None:intergenic 40.0%
GGATAATGAAAATCACTGCG+AGG + Chr3:103882268-103882287 MsG0380018060.01.T02:intron 40.0%
GTTCTCACAAACAAAAGGCA+GGG - Chr3:103880292-103880311 None:intergenic 40.0%
TCATGTGCTGAAACTAGGAT+TGG - Chr3:103881746-103881765 None:intergenic 40.0%
TCGTGAGTTAATATGTGCCT+TGG - Chr3:103879697-103879716 None:intergenic 40.0%
TGAAGGAGGATGATAACAAC+TGG + Chr3:103883540-103883559 MsG0380018060.01.T02:CDS 40.0%
TGTTGATCATCAGGATCAGT+AGG + Chr3:103883200-103883219 MsG0380018060.01.T02:intron 40.0%
TTAACATTACCTGTTGCCCA+TGG + Chr3:103880659-103880678 MsG0380018060.01.T01:intron 40.0%
TTGATGTAGTTCAAGCTGAG+AGG + Chr3:103881197-103881216 MsG0380018060.01.T01:intron 40.0%
TTGCATTATAGTGAGGAGTG+GGG + Chr3:103880582-103880601 MsG0380018060.01.T01:intron 40.0%
TTGCGATACTTACGACTTAC+GGG + Chr3:103881033-103881052 MsG0380018060.01.T01:intron 40.0%
TTTCTCTTTCTGCTTCTGCT+GGG + Chr3:103879071-103879090 MsG0380018060.01.T01:five_prime_UTR 40.0%
! ATAGTGGAATGTGAAGCTTG+TGG - Chr3:103882438-103882457 None:intergenic 40.0%
! CCTAAATAATGGAACGGATC+TGG + Chr3:103879587-103879606 MsG0380018060.01.T01:intron 40.0%
! TAGTTTCAGCACATGATGGA+TGG + Chr3:103881750-103881769 MsG0380018060.01.T01:three_prime_UTR 40.0%
! TCTCTCTCTCTCTCTAAGAA+AGG + Chr3:103879109-103879128 MsG0380018060.01.T01:five_prime_UTR 40.0%
!! AAGGTCAGTTTGTTATGGCA+AGG - Chr3:103882488-103882507 None:intergenic 40.0%
!! TAGGGCTCATTTTTGTTGTC+TGG + Chr3:103882639-103882658 MsG0380018060.01.T02:intron 40.0%
!! TCAGTTTGTTATGGCAAGGA+CGG - Chr3:103882484-103882503 None:intergenic 40.0%
!! TCGTATTATTTCTGACAGCG+AGG + Chr3:103883420-103883439 MsG0380018060.01.T02:CDS 40.0%
AACGAAGCTTACCATCTGGA+CGG - Chr3:103883318-103883337 None:intergenic 45.0%
AAGAAGAGACTGAGAGTCAG+AGG + Chr3:103879132-103879151 MsG0380018060.01.T01:five_prime_UTR 45.0%
AATATGTGTGACGCCTGTGT+AGG + Chr3:103881926-103881945 MsG0380018060.01.T01:three_prime_UTR 45.0%
ACTCACGATCACTAAGAAGC+TGG - Chr3:103880266-103880285 None:intergenic 45.0%
ACTTACGACTTACGGGAGTT+TGG + Chr3:103881040-103881059 MsG0380018060.01.T01:intron 45.0%
AGAAGAGACTGAGAGTCAGA+GGG + Chr3:103879133-103879152 MsG0380018060.01.T01:five_prime_UTR 45.0%
AGCAGGAACTGACAGCAAAT+GGG - Chr3:103880012-103880031 None:intergenic 45.0%
AGGAAAAGGGGGGTGAAATT+AGG - Chr3:103883478-103883497 None:intergenic 45.0%
ATCCTGGAAACAGAAGTCCA+TGG - Chr3:103880679-103880698 None:intergenic 45.0%
ATGAGACCATGGCAGATAGA+AGG - Chr3:103879777-103879796 None:intergenic 45.0%
ATGGACTTCTGTTTCCAGGA+TGG + Chr3:103880678-103880697 MsG0380018060.01.T01:intron 45.0%
CAACATGTTGCCAAGAGTTG+AGG + Chr3:103882586-103882605 MsG0380018060.01.T02:intron 45.0%
CGATACCATCATTCGTAAGG+AGG + Chr3:103883363-103883382 MsG0380018060.01.T02:CDS 45.0%
CTCACGATCACTAAGAAGCT+GGG - Chr3:103880265-103880284 None:intergenic 45.0%
CTTGTAGCTCTTGATGCAAG+TGG + Chr3:103879892-103879911 MsG0380018060.01.T01:intron 45.0%
CTTTCTCTTTCTGCTTCTGC+TGG + Chr3:103879070-103879089 MsG0380018060.01.T01:five_prime_UTR 45.0%
GACCAACTATGATCCAATGG+AGG + Chr3:103882400-103882419 MsG0380018060.01.T02:intron 45.0%
GATCATCAGGATCAGTAGGA+TGG + Chr3:103883204-103883223 MsG0380018060.01.T02:intron 45.0%
GCATAACGAAGCTTACCATC+TGG - Chr3:103883322-103883341 None:intergenic 45.0%
GGAAAAGGGGGGTGAAATTA+GGG - Chr3:103883477-103883496 None:intergenic 45.0%
GGCGGTTATTGTTGATCATC+AGG + Chr3:103883191-103883210 MsG0380018060.01.T02:intron 45.0%
GTAAGGGCTACAAAAGAAGC+GGG + Chr3:103883062-103883081 MsG0380018060.01.T02:intron 45.0%
GTCCCACCAGAATACATAAC+TGG - Chr3:103881483-103881502 None:intergenic 45.0%
GTGTCACAGCTTGACTTTCT+GGG + Chr3:103881694-103881713 MsG0380018060.01.T01:three_prime_UTR 45.0%
GTTTGCTTAATGCCCTCCAT+TGG - Chr3:103882416-103882435 None:intergenic 45.0%
TAAAAGATGCGAAGGCCTTC+AGG - Chr3:103883680-103883699 None:intergenic 45.0%
TACTGGTGACCTCAACTCAA+TGG - Chr3:103880862-103880881 None:intergenic 45.0%
TCCTGGAAACAGAAGTCCAT+GGG - Chr3:103880678-103880697 None:intergenic 45.0%
TCTATCTGCCATGGTCTCAT+GGG + Chr3:103879777-103879796 MsG0380018060.01.T01:intron 45.0%
TCTGAACTGAGTCCAAACTG+AGG - Chr3:103881505-103881524 None:intergenic 45.0%
TGCATTATAGTGAGGAGTGG+GGG + Chr3:103880583-103880602 MsG0380018060.01.T01:intron 45.0%
TGTATTACAGCTGTCCATCC+TGG - Chr3:103880695-103880714 None:intergenic 45.0%
TGTGTCACAGCTTGACTTTC+TGG + Chr3:103881693-103881712 MsG0380018060.01.T01:three_prime_UTR 45.0%
TTCTATCTGCCATGGTCTCA+TGG + Chr3:103879776-103879795 MsG0380018060.01.T01:intron 45.0%
TTGTTATGGCAAGGACGGAA+TGG - Chr3:103882479-103882498 None:intergenic 45.0%
! CTTTAGCCTTCTATCTGCCA+TGG + Chr3:103879768-103879787 MsG0380018060.01.T01:intron 45.0%
! GTGAGCAATGGCAAAGCTTT+TGG + Chr3:103879986-103880005 MsG0380018060.01.T01:intron 45.0%
! GTTGCTGGTTGAGAATCGAT+CGG + Chr3:103883170-103883189 MsG0380018060.01.T02:intron 45.0%
! TAGGATTGGCACTGTGCATT+TGG - Chr3:103881732-103881751 None:intergenic 45.0%
! TATTAAACTCTGGGGGTTGC+TGG + Chr3:103883155-103883174 MsG0380018060.01.T02:intron 45.0%
!! AATAAAGCATCGGACAGGAC+AGG - Chr3:103879404-103879423 None:intergenic 45.0%
!! AACAAAAAAAAAAAAAAAAA+AGG - Chr3:103879928-103879947 None:intergenic 5.0%
AACAGAAGTCCATGGGCAAC+AGG - Chr3:103880671-103880690 None:intergenic 50.0%
AGGGGGGTGAAATTAGGGTT+AGG - Chr3:103883472-103883491 None:intergenic 50.0%
ATTCTGGTGGGACCTCAGTT+TGG + Chr3:103881490-103881509 MsG0380018060.01.T01:three_prime_UTR 50.0%
CAAGTTCCTGACGACCAACA+CGG - Chr3:103883577-103883596 None:intergenic 50.0%
CAGCTGGTGACATAATCTGG+GGG - Chr3:103881657-103881676 None:intergenic 50.0%
CGCAGCTGGTGACATAATCT+GGG - Chr3:103881659-103881678 None:intergenic 50.0%
GAACGGTTCCTTTGATTGGG+CGG - Chr3:103879252-103879271 None:intergenic 50.0%
GAGCAGGAACTGACAGCAAA+TGG - Chr3:103880013-103880032 None:intergenic 50.0%
GATCAGTGGATGTCCAACCA+AGG + Chr3:103879677-103879696 MsG0380018060.01.T01:intron 50.0%
GCAGCTGGTGACATAATCTG+GGG - Chr3:103881658-103881677 None:intergenic 50.0%
GCCCTCCATTGGATCATAGT+TGG - Chr3:103882405-103882424 None:intergenic 50.0%
GGGGGGTGAAATTAGGGTTA+GGG - Chr3:103883471-103883490 None:intergenic 50.0%
GTCAAGCTGTGACACAGAAG+AGG - Chr3:103881689-103881708 None:intergenic 50.0%
TCAGTTCAGACTCCCTCATC+AGG + Chr3:103881515-103881534 MsG0380018060.01.T01:three_prime_UTR 50.0%
TCGCAGCTGGTGACATAATC+TGG - Chr3:103881660-103881679 None:intergenic 50.0%
TTATGGCAAGGACGGAATGG+TGG - Chr3:103882476-103882495 None:intergenic 50.0%
! AATGGAACGGATCTGGGACT+GGG + Chr3:103879594-103879613 MsG0380018060.01.T01:intron 50.0%
! GAGTTTGAGTTCCGTCCAGA+TGG + Chr3:103883304-103883323 MsG0380018060.01.T02:CDS 50.0%
! TAATGGAACGGATCTGGGAC+TGG + Chr3:103879593-103879612 MsG0380018060.01.T01:intron 50.0%
!! CAAAGCAGTGCTGATCCTGA+AGG + Chr3:103883662-103883681 MsG0380018060.01.T02:CDS 50.0%
!! GTTGTTGAAAAGGGGCACCA+TGG + Chr3:103882547-103882566 MsG0380018060.01.T02:intron 50.0%
!! TCAGCACATGATGGATGGCA+TGG + Chr3:103881755-103881774 MsG0380018060.01.T01:three_prime_UTR 50.0%
AAAAGGCAGAAGGGAGGGGA+AGG - Chr3:103881602-103881621 None:intergenic 55.0%
ACCACCACAGGACCAGATTC+CGG - Chr3:103879213-103879232 None:intergenic 55.0%
CGACACTCACGAAGAACAGC+AGG - Chr3:103883400-103883419 None:intergenic 55.0%
GAGCTTGAGCTTGAGCGTGA+GGG - Chr3:103879173-103879192 None:intergenic 55.0%
GCCCATGGACTTCTGTTTCC+AGG + Chr3:103880674-103880693 MsG0380018060.01.T01:intron 55.0%
GCTATGCTCCGCCCAATCAA+AGG + Chr3:103879241-103879260 MsG0380018060.01.T01:CDS 55.0%
GCTGGTTGAGAATCGATCGG+CGG + Chr3:103883173-103883192 MsG0380018060.01.T02:intron 55.0%
TACAAAAGAAGCGGGCCTGG+TGG + Chr3:103883070-103883089 MsG0380018060.01.T02:intron 55.0%
TCAAGCTCAAGCTCAGCCAC+CGG + Chr3:103879191-103879210 MsG0380018060.01.T01:CDS 55.0%
TGAGCTTGAGCTTGAGCGTG+AGG - Chr3:103879174-103879193 None:intergenic 55.0%
AAGAAGCGGGCCTGGTGGAA+AGG + Chr3:103883075-103883094 MsG0380018060.01.T02:intron 60.0%
ACCACAGGACCAGATTCCGG+TGG - Chr3:103879210-103879229 None:intergenic 60.0%
ACCGGAATCTGGTCCTGTGG+TGG + Chr3:103879209-103879228 MsG0380018060.01.T01:CDS 60.0%
CAAGCTCAGCCACCGGAATC+TGG + Chr3:103879198-103879217 MsG0380018060.01.T01:CDS 60.0%
GGAATCTGGTCCTGTGGTGG+TGG + Chr3:103879212-103879231 MsG0380018060.01.T01:CDS 60.0%
GGCTACAAAAGAAGCGGGCC+TGG + Chr3:103883067-103883086 MsG0380018060.01.T02:intron 60.0%
TAGCGCTTCACCACCACCAC+AGG - Chr3:103879225-103879244 None:intergenic 60.0%
TCCTGACGACCAACACGGTC+TGG - Chr3:103883572-103883591 None:intergenic 60.0%
TGGCCTGAACCAGACCGTGT+TGG + Chr3:103883560-103883579 MsG0380018060.01.T02:CDS 60.0%
! ACCAGACCGTGTTGGTCGTC+AGG + Chr3:103883568-103883587 MsG0380018060.01.T02:CDS 60.0%
! CGACCAACACGGTCTGGTTC+AGG - Chr3:103883566-103883585 None:intergenic 60.0%
!! GAAGAGGAAGCACTCGCAGC+TGG - Chr3:103881673-103881692 None:intergenic 60.0%
!! TCGAGTTGGGCCTTTCCACC+AGG - Chr3:103883088-103883107 None:intergenic 60.0%
GCCACCGGAATCTGGTCCTG+TGG + Chr3:103879206-103879225 MsG0380018060.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 103879050 103883826 103879050 ID=MsG0380018060.01;Name=MsG0380018060.01
Chr3 mRNA 103879050 103882123 103879050 ID=MsG0380018060.01.T01;Parent=MsG0380018060.01;Name=MsG0380018060.01.T01;_AED=0.49;_eAED=0.53;_QI=106|0.5|0.4|1|0.5|0.6|5|631|120
Chr3 exon 103879050 103879300 103879050 ID=MsG0380018060.01.T01:exon:20338;Parent=MsG0380018060.01.T01
Chr3 exon 103880088 103880303 103880088 ID=MsG0380018060.01.T01:exon:20339;Parent=MsG0380018060.01.T01
Chr3 exon 103880696 103880747 103880696 ID=MsG0380018060.01.T01:exon:20340;Parent=MsG0380018060.01.T01
Chr3 exon 103881419 103881536 103881419 ID=MsG0380018060.01.T01:exon:20341;Parent=MsG0380018060.01.T01
Chr3 exon 103881661 103882123 103881661 ID=MsG0380018060.01.T01:exon:20342;Parent=MsG0380018060.01.T01
Chr3 five_prime_UTR 103879050 103879155 103879050 ID=MsG0380018060.01.T01:five_prime_utr;Parent=MsG0380018060.01.T01
Chr3 CDS 103879156 103879300 103879156 ID=MsG0380018060.01.T01:cds;Parent=MsG0380018060.01.T01
Chr3 CDS 103880088 103880303 103880088 ID=MsG0380018060.01.T01:cds;Parent=MsG0380018060.01.T01
Chr3 CDS 103880696 103880697 103880696 ID=MsG0380018060.01.T01:cds;Parent=MsG0380018060.01.T01
Chr3 three_prime_UTR 103880698 103880747 103880698 ID=MsG0380018060.01.T01:three_prime_utr;Parent=MsG0380018060.01.T01
Chr3 three_prime_UTR 103881419 103881536 103881419 ID=MsG0380018060.01.T01:three_prime_utr;Parent=MsG0380018060.01.T01
Chr3 three_prime_UTR 103881661 103882123 103881661 ID=MsG0380018060.01.T01:three_prime_utr;Parent=MsG0380018060.01.T01
Chr3 mRNA 103881909 103883826 103881909 ID=MsG0380018060.01.T02;Parent=MsG0380018060.01;Name=MsG0380018060.01.T02;_AED=0.50;_eAED=0.57;_QI=0|0|0|1|0.5|0.33|3|0|184
Chr3 exon 103881909 103881943 103881909 ID=MsG0380018060.01.T02:exon:20343;Parent=MsG0380018060.01.T02
Chr3 exon 103883213 103883441 103883213 ID=MsG0380018060.01.T02:exon:20344;Parent=MsG0380018060.01.T02
Chr3 exon 103883536 103883826 103883536 ID=MsG0380018060.01.T02:exon:20345;Parent=MsG0380018060.01.T02
Chr3 CDS 103881909 103881943 103881909 ID=MsG0380018060.01.T02:cds;Parent=MsG0380018060.01.T02
Chr3 CDS 103883213 103883441 103883213 ID=MsG0380018060.01.T02:cds;Parent=MsG0380018060.01.T02
Chr3 CDS 103883536 103883826 103883536 ID=MsG0380018060.01.T02:cds;Parent=MsG0380018060.01.T02
Gene Sequence

>MsG0380018060.01.T02

ATGCAAGACAGAATCAGAATATGTGTGACGCCTGTGATCAGTAGGATGGGAAGCGAAGAAGAGAATGCAGAGTTTTACTTGAGATACTACGTTGGTCATAAGGGTAAATTCGGACATGAATTTTTGGAGTTTGAGTTCCGTCCAGATGGTAAGCTTCGTTATGCTAACAATTCCAATTACAAAAACGATACCATCATTCGTAAGGAGGTTTATCTTACTCCTGCTGTTCTTCGTGAGTGTCGTCGTATTATTTCTGACAGCGAGATTATGAAGGAGGATGATAACAACTGGCCTGAACCAGACCGTGTTGGTCGTCAGGAACTTGAGATTGTTATGGGGAATGAGCATATCTCCTTTACTACTTCCAAGATTGGTTCTCTTGTTGATGTTCAAAGCAGTGCTGATCCTGAAGGCCTTCGCATCTTTTACTATCTTGTTCAGGTCTGTCAGATTCATTCTATTTACTCACTCACTCACTCATTGTTACAATTACAAGGATCATTTCAGATTCTTCCTTCAAATTTAAGCATACCAAAACTGCTTAAGCACAGATAA

>MsG0380018060.01.T01

ATGATGCTAGAAAACCCTCACGCTCAAGCTCAAGCTCAAGCTCAAGCTCAGCCACCGGAATCTGGTCCTGTGGTGGTGGTGAAGCGCTATGCTCCGCCCAATCAAAGGAACCGTTCTATCAATAATAGGCGGAAATCATCATCTGATCGGCTTGATCGATCAAACAGTGTTGGCAGTGATATAGAAAAGAATCAAGTTGCTTCTTCAAAAAACATTCAAGTTACAGATCACGGAGATGCTAGCAGCAGTAATATTTTTAATGACAACCATTATTCAAGAAGATTCATTGCTTTAGAAGGTTGTAGTAGCAGTGCAGCTTCCCAGCTTCTTAGTGATCGTGAGTCTTCCCTGCCTTTTGTTTGA
Protein sequence

>MsG0380018060.01.T02

MQDRIRICVTPVISRMGSEEENAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQVCQIHSIYSLTHSLLQLQGSFQILPSNLSIPKLLKHR*

>MsG0380018060.01.T01

MMLENPHAQAQAQAQAQPPESGPVVVVKRYAPPNQRNRSINNRRKSSSDRLDRSNSVGSDIEKNQVASSKNIQVTDHGDASSSNIFNDNHYSRRFIALEGCSSSAASQLLSDRESSLPFV*