Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016746.01.T01 | AFK42735.1 | 94.928 | 138 | 7 | 0 | 1 | 138 | 1 | 138 | 1.32E-90 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016746.01.T01 | A7NY33 | 68.462 | 130 | 41 | 0 | 9 | 138 | 8 | 137 | 1.56E-60 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016746.01.T01 | I3SR43 | 94.928 | 138 | 7 | 0 | 1 | 138 | 1 | 138 | 6.30e-91 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280011169.01 | MsG0380016746.01 | 0.802764 | 4.805327e-49 | 2.373630e-46 |
| MsG0380014794.01 | MsG0380016746.01 | 0.842471 | 2.534430e-58 | 3.847018e-55 |
| MsG0380016746.01 | MsG0380017056.01 | 0.802487 | 5.480841e-49 | 2.688090e-46 |
| MsG0380016746.01 | MsG0480020433.01 | 0.804260 | 2.352884e-49 | 1.207565e-46 |
| MsG0380016746.01 | MsG0480021788.01 | 0.814444 | 1.535577e-51 | 1.030548e-48 |
| MsG0380016746.01 | MsG0480021789.01 | 0.813869 | 2.056835e-51 | 1.359007e-48 |
| MsG0380016746.01 | MsG0480021892.01 | 0.828613 | 8.155784e-55 | 8.148072e-52 |
| MsG0380016746.01 | MsG0480023998.01 | 0.809871 | 1.527104e-50 | 9.069616e-48 |
| MsG0380016746.01 | MsG0580024768.01 | 0.800937 | 1.140082e-48 | 5.376367e-46 |
| MsG0380016746.01 | MsG0580029399.01 | 0.811584 | 6.507276e-51 | 4.043546e-48 |
| MsG0380016746.01 | MsG0680035612.01 | 0.801100 | 1.056114e-48 | 5.001103e-46 |
| MsG0380016746.01 | MsG0780036469.01 | 0.800872 | 1.175491e-48 | 5.534116e-46 |
| MsG0380016746.01 | MsG0780036584.01 | 0.818192 | 2.228133e-52 | 1.656554e-49 |
| MsG0380016746.01 | MsG0880045409.01 | 0.817200 | 3.731333e-52 | 2.699657e-49 |
| MsG0380016746.01 | MsG0880046406.01 | 0.810095 | 1.366645e-50 | 8.164176e-48 |
| MsG0280010523.01 | MsG0380016746.01 | 0.803708 | 3.064108e-49 | 1.550443e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016746.01.T01 | MTR_3g094650 | 94.928 | 138 | 7 | 0 | 1 | 138 | 1 | 138 | 2.02e-92 | 270 |
| MsG0380016746.01.T01 | MTR_3g094630 | 87.681 | 138 | 17 | 0 | 1 | 138 | 1 | 138 | 5.17e-77 | 231 |
| MsG0380016746.01.T01 | MTR_3g094670 | 87.681 | 138 | 17 | 0 | 1 | 138 | 1 | 138 | 4.71e-76 | 229 |
| MsG0380016746.01.T01 | MTR_5g083860 | 72.441 | 127 | 34 | 1 | 12 | 138 | 16 | 141 | 7.36e-60 | 187 |
| MsG0380016746.01.T01 | MTR_3g466200 | 66.667 | 129 | 43 | 0 | 10 | 138 | 7 | 135 | 2.43e-57 | 181 |
| MsG0380016746.01.T01 | MTR_2g084020 | 66.667 | 126 | 42 | 0 | 13 | 138 | 10 | 135 | 8.04e-56 | 177 |
| MsG0380016746.01.T01 | MTR_2g084110 | 66.667 | 126 | 42 | 0 | 13 | 138 | 10 | 135 | 1.11e-55 | 177 |
| MsG0380016746.01.T01 | MTR_2g084010 | 65.873 | 126 | 43 | 0 | 13 | 138 | 10 | 135 | 8.51e-55 | 174 |
| MsG0380016746.01.T01 | MTR_2g084080 | 68.033 | 122 | 39 | 0 | 14 | 135 | 11 | 132 | 7.69e-54 | 172 |
| MsG0380016746.01.T01 | MTR_2g084090 | 65.625 | 128 | 44 | 0 | 11 | 138 | 8 | 135 | 8.42e-54 | 172 |
| MsG0380016746.01.T01 | MTR_5g074970 | 61.029 | 136 | 48 | 2 | 4 | 135 | 3 | 137 | 4.30e-52 | 167 |
| MsG0380016746.01.T01 | MTR_1g115900 | 61.417 | 127 | 48 | 1 | 11 | 136 | 9 | 135 | 1.38e-51 | 166 |
| MsG0380016746.01.T01 | MTR_7g072480 | 60.630 | 127 | 50 | 0 | 9 | 135 | 5 | 131 | 7.31e-51 | 164 |
| MsG0380016746.01.T01 | MTR_7g072510 | 64.167 | 120 | 43 | 0 | 16 | 135 | 8 | 127 | 1.21e-50 | 164 |
| MsG0380016746.01.T01 | MTR_2g084000 | 61.538 | 130 | 46 | 1 | 9 | 138 | 11 | 136 | 3.42e-50 | 162 |
| MsG0380016746.01.T01 | MTR_5g017850 | 60.800 | 125 | 46 | 1 | 11 | 135 | 13 | 134 | 2.66e-49 | 160 |
| MsG0380016746.01.T01 | MTR_3g072260 | 62.500 | 128 | 39 | 2 | 17 | 135 | 6 | 133 | 1.11e-48 | 153 |
| MsG0380016746.01.T01 | MTR_4g074980 | 58.730 | 126 | 52 | 0 | 9 | 134 | 6 | 131 | 2.23e-48 | 156 |
| MsG0380016746.01.T01 | MTR_4g125940 | 62.097 | 124 | 45 | 1 | 12 | 135 | 12 | 133 | 3.61e-48 | 158 |
| MsG0380016746.01.T01 | MTR_3g072190 | 59.398 | 133 | 48 | 1 | 9 | 135 | 1 | 133 | 4.01e-48 | 157 |
| MsG0380016746.01.T01 | MTR_4g074980 | 58.730 | 126 | 52 | 0 | 9 | 134 | 6 | 131 | 4.46e-48 | 156 |
| MsG0380016746.01.T01 | MTR_4g074990 | 59.350 | 123 | 49 | 1 | 13 | 134 | 8 | 130 | 6.23e-48 | 156 |
| MsG0380016746.01.T01 | MTR_5g074860 | 57.463 | 134 | 56 | 1 | 6 | 138 | 7 | 140 | 1.51e-47 | 155 |
| MsG0380016746.01.T01 | MTR_7g093370 | 57.246 | 138 | 51 | 2 | 8 | 137 | 42 | 179 | 2.36e-47 | 157 |
| MsG0380016746.01.T01 | MTR_5g074710 | 58.915 | 129 | 52 | 1 | 11 | 138 | 8 | 136 | 5.05e-47 | 154 |
| MsG0380016746.01.T01 | MTR_5g074860 | 57.463 | 134 | 56 | 1 | 6 | 138 | 7 | 140 | 5.91e-47 | 154 |
| MsG0380016746.01.T01 | MTR_4g074995 | 58.268 | 127 | 53 | 0 | 8 | 134 | 4 | 130 | 6.90e-47 | 154 |
| MsG0380016746.01.T01 | MTR_4g083710 | 59.200 | 125 | 50 | 1 | 11 | 134 | 9 | 133 | 1.02e-46 | 154 |
| MsG0380016746.01.T01 | MTR_5g074760 | 57.463 | 134 | 52 | 2 | 10 | 138 | 3 | 136 | 2.62e-46 | 153 |
| MsG0380016746.01.T01 | MTR_5g017860 | 57.258 | 124 | 51 | 1 | 14 | 135 | 11 | 134 | 2.82e-46 | 153 |
| MsG0380016746.01.T01 | MTR_5g074740 | 60.317 | 126 | 49 | 1 | 14 | 138 | 11 | 136 | 4.95e-46 | 152 |
| MsG0380016746.01.T01 | MTR_3g466180 | 64.602 | 113 | 40 | 0 | 11 | 123 | 14 | 126 | 8.11e-46 | 151 |
| MsG0380016746.01.T01 | MTR_1g054205 | 55.725 | 131 | 56 | 2 | 10 | 138 | 5 | 135 | 3.50e-45 | 150 |
| MsG0380016746.01.T01 | MTR_7g026990 | 55.200 | 125 | 55 | 1 | 15 | 138 | 17 | 141 | 1.40e-44 | 148 |
| MsG0380016746.01.T01 | MTR_4g029200 | 56.637 | 113 | 49 | 0 | 26 | 138 | 44 | 156 | 3.07e-44 | 148 |
| MsG0380016746.01.T01 | MTR_4g122640 | 61.111 | 108 | 42 | 0 | 28 | 135 | 38 | 145 | 6.55e-43 | 144 |
| MsG0380016746.01.T01 | MTR_2g029815 | 55.000 | 120 | 54 | 0 | 12 | 131 | 13 | 132 | 4.55e-42 | 142 |
| MsG0380016746.01.T01 | MTR_4g029170 | 55.039 | 129 | 56 | 2 | 9 | 135 | 7 | 135 | 4.40e-41 | 139 |
| MsG0380016746.01.T01 | MTR_4g030890 | 55.085 | 118 | 53 | 0 | 21 | 138 | 93 | 210 | 1.34e-40 | 140 |
| MsG0380016746.01.T01 | MTR_2g040000 | 54.815 | 135 | 57 | 2 | 5 | 137 | 4 | 136 | 2.18e-40 | 137 |
| MsG0380016746.01.T01 | MTR_5g049280 | 53.448 | 116 | 54 | 0 | 23 | 138 | 28 | 143 | 2.81e-40 | 137 |
| MsG0380016746.01.T01 | MTR_2g029560 | 57.522 | 113 | 48 | 0 | 19 | 131 | 15 | 127 | 6.25e-40 | 137 |
| MsG0380016746.01.T01 | MTR_2g029820 | 50.781 | 128 | 59 | 1 | 8 | 131 | 5 | 132 | 1.02e-39 | 136 |
| MsG0380016746.01.T01 | MTR_4g029180 | 63.208 | 106 | 38 | 1 | 31 | 135 | 30 | 135 | 1.49e-39 | 135 |
| MsG0380016746.01.T01 | MTR_5g021060 | 55.856 | 111 | 49 | 0 | 28 | 138 | 30 | 140 | 1.75e-39 | 135 |
| MsG0380016746.01.T01 | MTR_0155s0040 | 45.455 | 132 | 71 | 1 | 7 | 138 | 6 | 136 | 2.18e-39 | 135 |
| MsG0380016746.01.T01 | MTR_4g031140 | 49.624 | 133 | 63 | 1 | 10 | 138 | 6 | 138 | 2.90e-39 | 135 |
| MsG0380016746.01.T01 | MTR_2g029730 | 54.867 | 113 | 51 | 0 | 19 | 131 | 16 | 128 | 9.24e-39 | 134 |
| MsG0380016746.01.T01 | MTR_2g029910 | 50.000 | 128 | 60 | 1 | 8 | 131 | 6 | 133 | 9.95e-39 | 134 |
| MsG0380016746.01.T01 | MTR_8g076820 | 52.459 | 122 | 58 | 0 | 17 | 138 | 19 | 140 | 1.40e-38 | 133 |
| MsG0380016746.01.T01 | MTR_2g029860 | 52.632 | 133 | 60 | 2 | 1 | 131 | 1 | 132 | 2.16e-38 | 133 |
| MsG0380016746.01.T01 | MTR_2g029830 | 56.250 | 112 | 49 | 0 | 23 | 134 | 23 | 134 | 2.61e-38 | 133 |
| MsG0380016746.01.T01 | MTR_2g029750 | 55.085 | 118 | 53 | 0 | 14 | 131 | 15 | 132 | 3.20e-38 | 132 |
| MsG0380016746.01.T01 | MTR_1g022970 | 55.455 | 110 | 49 | 0 | 28 | 137 | 46 | 155 | 3.96e-38 | 132 |
| MsG0380016746.01.T01 | MTR_3g467600 | 50.394 | 127 | 62 | 1 | 14 | 139 | 13 | 139 | 6.39e-38 | 131 |
| MsG0380016746.01.T01 | MTR_2g029850 | 51.181 | 127 | 58 | 1 | 9 | 131 | 6 | 132 | 6.75e-38 | 132 |
| MsG0380016746.01.T01 | MTR_4g114210 | 55.738 | 122 | 47 | 3 | 17 | 135 | 7 | 124 | 1.30e-37 | 130 |
| MsG0380016746.01.T01 | MTR_2g029740 | 53.390 | 118 | 55 | 0 | 14 | 131 | 15 | 132 | 2.47e-37 | 130 |
| MsG0380016746.01.T01 | MTR_4g046713 | 48.000 | 125 | 64 | 1 | 14 | 138 | 13 | 136 | 2.75e-37 | 129 |
| MsG0380016746.01.T01 | MTR_2g028980 | 55.556 | 117 | 52 | 0 | 15 | 131 | 16 | 132 | 3.90e-37 | 130 |
| MsG0380016746.01.T01 | MTR_2g029800 | 48.819 | 127 | 61 | 1 | 9 | 131 | 6 | 132 | 1.54e-36 | 128 |
| MsG0380016746.01.T01 | MTR_2g088770 | 50.400 | 125 | 60 | 2 | 12 | 136 | 10 | 132 | 2.04e-36 | 127 |
| MsG0380016746.01.T01 | MTR_4g029190 | 49.573 | 117 | 58 | 1 | 20 | 135 | 37 | 153 | 8.72e-36 | 126 |
| MsG0380016746.01.T01 | MTR_4g125940 | 78.481 | 79 | 15 | 1 | 57 | 135 | 2 | 78 | 1.30e-35 | 124 |
| MsG0380016746.01.T01 | MTR_6g027440 | 46.774 | 124 | 65 | 1 | 14 | 137 | 7 | 129 | 7.19e-35 | 123 |
| MsG0380016746.01.T01 | MTR_1g101830 | 47.445 | 137 | 70 | 2 | 1 | 137 | 1 | 135 | 9.24e-35 | 123 |
| MsG0380016746.01.T01 | MTR_1g077000 | 44.118 | 136 | 67 | 2 | 8 | 135 | 11 | 145 | 1.51e-34 | 122 |
| MsG0380016746.01.T01 | MTR_7g107520 | 47.541 | 122 | 63 | 1 | 13 | 134 | 10 | 130 | 1.81e-34 | 122 |
| MsG0380016746.01.T01 | MTR_1g025980 | 45.802 | 131 | 70 | 1 | 7 | 137 | 3 | 132 | 2.78e-34 | 121 |
| MsG0380016746.01.T01 | MTR_5g014100 | 52.727 | 110 | 52 | 0 | 28 | 137 | 26 | 135 | 2.79e-34 | 122 |
| MsG0380016746.01.T01 | MTR_2g067440 | 52.727 | 110 | 50 | 2 | 26 | 135 | 58 | 165 | 4.07e-33 | 120 |
| MsG0380016746.01.T01 | MTR_3g092990 | 44.531 | 128 | 70 | 1 | 14 | 141 | 13 | 139 | 1.42e-32 | 117 |
| MsG0380016746.01.T01 | MTR_2g008160 | 48.718 | 117 | 57 | 2 | 21 | 137 | 17 | 130 | 1.79e-32 | 114 |
| MsG0380016746.01.T01 | MTR_2g078280 | 49.123 | 114 | 55 | 2 | 26 | 137 | 74 | 186 | 5.53e-32 | 117 |
| MsG0380016746.01.T01 | MTR_7g086820 | 48.246 | 114 | 58 | 1 | 24 | 137 | 16 | 128 | 6.14e-32 | 115 |
| MsG0380016746.01.T01 | MTR_1g086490 | 43.284 | 134 | 73 | 1 | 9 | 139 | 8 | 141 | 1.68e-31 | 115 |
| MsG0380016746.01.T01 | MTR_8g075100 | 48.673 | 113 | 57 | 1 | 23 | 135 | 21 | 132 | 2.10e-31 | 114 |
| MsG0380016746.01.T01 | MTR_2g078610 | 49.123 | 114 | 55 | 2 | 26 | 137 | 74 | 186 | 2.36e-31 | 115 |
| MsG0380016746.01.T01 | MTR_2g008160 | 47.899 | 119 | 59 | 2 | 21 | 139 | 17 | 132 | 4.09e-31 | 112 |
| MsG0380016746.01.T01 | MTR_2g077990 | 49.123 | 114 | 55 | 2 | 26 | 137 | 74 | 186 | 4.97e-31 | 114 |
| MsG0380016746.01.T01 | MTR_2g008160 | 47.899 | 119 | 59 | 2 | 21 | 139 | 17 | 132 | 6.15e-31 | 113 |
| MsG0380016746.01.T01 | MTR_1g086320 | 42.537 | 134 | 74 | 1 | 9 | 139 | 8 | 141 | 6.66e-31 | 113 |
| MsG0380016746.01.T01 | MTR_5g022870 | 43.411 | 129 | 71 | 2 | 9 | 137 | 5 | 131 | 1.45e-30 | 112 |
| MsG0380016746.01.T01 | MTR_2g008710 | 42.857 | 133 | 67 | 3 | 10 | 137 | 4 | 132 | 2.25e-29 | 108 |
| MsG0380016746.01.T01 | MTR_7g086870 | 45.536 | 112 | 60 | 1 | 26 | 137 | 20 | 130 | 4.59e-29 | 108 |
| MsG0380016746.01.T01 | MTR_2g437770 | 46.296 | 108 | 54 | 1 | 28 | 135 | 50 | 153 | 1.17e-28 | 107 |
| MsG0380016746.01.T01 | MTR_7g029030 | 41.667 | 132 | 75 | 2 | 8 | 138 | 5 | 135 | 1.18e-28 | 107 |
| MsG0380016746.01.T01 | MTR_1g090760 | 43.077 | 130 | 68 | 3 | 15 | 138 | 11 | 140 | 6.62e-27 | 102 |
| MsG0380016746.01.T01 | MTR_1g038680 | 46.667 | 105 | 55 | 1 | 32 | 135 | 33 | 137 | 1.45e-26 | 101 |
| MsG0380016746.01.T01 | MTR_4g132490 | 42.017 | 119 | 69 | 0 | 19 | 137 | 20 | 138 | 6.74e-26 | 100 |
| MsG0380016746.01.T01 | MTR_2g099175 | 45.133 | 113 | 59 | 2 | 27 | 139 | 35 | 144 | 1.20e-25 | 99.4 |
| MsG0380016746.01.T01 | MTR_3g105790 | 40.152 | 132 | 71 | 3 | 10 | 137 | 3 | 130 | 4.53e-25 | 97.8 |
| MsG0380016746.01.T01 | MTR_4g114220 | 52.747 | 91 | 33 | 2 | 45 | 135 | 20 | 100 | 9.79e-25 | 92.8 |
| MsG0380016746.01.T01 | MTR_1g089005 | 40.945 | 127 | 68 | 2 | 14 | 134 | 1 | 126 | 1.18e-24 | 92.8 |
| MsG0380016746.01.T01 | MTR_2g067450 | 47.321 | 112 | 55 | 3 | 26 | 135 | 9 | 118 | 2.09e-24 | 95.9 |
| MsG0380016746.01.T01 | MTR_3g072190 | 70.312 | 64 | 19 | 0 | 72 | 135 | 3 | 66 | 5.41e-24 | 93.6 |
| MsG0380016746.01.T01 | MTR_4g087965 | 42.982 | 114 | 62 | 2 | 27 | 137 | 41 | 154 | 6.74e-24 | 94.7 |
| MsG0380016746.01.T01 | MTR_1g066380 | 41.071 | 112 | 63 | 2 | 26 | 136 | 25 | 134 | 1.04e-23 | 94.0 |
| MsG0380016746.01.T01 | MTR_6g043460 | 38.889 | 144 | 79 | 2 | 1 | 135 | 1 | 144 | 1.04e-23 | 94.4 |
| MsG0380016746.01.T01 | MTR_4g133800 | 43.396 | 106 | 56 | 2 | 29 | 134 | 42 | 143 | 1.84e-23 | 93.6 |
| MsG0380016746.01.T01 | MTR_7g072490 | 67.742 | 62 | 20 | 0 | 74 | 135 | 2 | 63 | 1.93e-23 | 91.3 |
| MsG0380016746.01.T01 | MTR_1g066710 | 38.793 | 116 | 68 | 2 | 24 | 138 | 23 | 136 | 3.05e-23 | 92.8 |
| MsG0380016746.01.T01 | MTR_6g043280 | 44.144 | 111 | 56 | 3 | 28 | 135 | 41 | 148 | 4.33e-23 | 92.4 |
| MsG0380016746.01.T01 | MTR_5g016010 | 39.552 | 134 | 76 | 3 | 9 | 137 | 6 | 139 | 5.37e-23 | 92.4 |
| MsG0380016746.01.T01 | MTR_1g066640 | 38.938 | 113 | 68 | 1 | 26 | 138 | 25 | 136 | 8.50e-23 | 91.7 |
| MsG0380016746.01.T01 | MTR_4g132110 | 37.037 | 135 | 81 | 3 | 9 | 141 | 12 | 144 | 9.36e-23 | 91.7 |
| MsG0380016746.01.T01 | MTR_4g132110 | 38.760 | 129 | 75 | 3 | 9 | 135 | 12 | 138 | 1.91e-22 | 90.9 |
| MsG0380016746.01.T01 | MTR_3g092990 | 39.844 | 128 | 65 | 2 | 14 | 141 | 13 | 128 | 2.86e-22 | 90.1 |
| MsG0380016746.01.T01 | MTR_1g066680 | 38.462 | 117 | 70 | 2 | 24 | 140 | 23 | 137 | 3.53e-22 | 90.1 |
| MsG0380016746.01.T01 | MTR_8g062780 | 41.860 | 129 | 73 | 2 | 11 | 138 | 7 | 134 | 4.51e-22 | 89.7 |
| MsG0380016746.01.T01 | MTR_1g009750 | 39.695 | 131 | 75 | 3 | 11 | 138 | 10 | 139 | 4.99e-22 | 89.7 |
| MsG0380016746.01.T01 | MTR_4g095450 | 41.221 | 131 | 73 | 3 | 11 | 137 | 9 | 139 | 1.64e-21 | 88.2 |
| MsG0380016746.01.T01 | MTR_6g048160 | 55.405 | 74 | 29 | 2 | 67 | 140 | 22 | 91 | 2.55e-21 | 82.4 |
| MsG0380016746.01.T01 | MTR_5g033470 | 40.171 | 117 | 65 | 2 | 22 | 135 | 67 | 181 | 2.95e-21 | 88.2 |
| MsG0380016746.01.T01 | MTR_6g043240 | 35.294 | 136 | 73 | 4 | 11 | 135 | 16 | 147 | 6.41e-21 | 87.0 |
| MsG0380016746.01.T01 | MTR_0286s0010 | 40.310 | 129 | 64 | 4 | 14 | 133 | 17 | 141 | 1.02e-20 | 86.3 |
| MsG0380016746.01.T01 | MTR_6g008075 | 40.310 | 129 | 64 | 4 | 14 | 133 | 17 | 141 | 1.02e-20 | 86.3 |
| MsG0380016746.01.T01 | MTR_2g029830 | 57.377 | 61 | 26 | 0 | 74 | 134 | 6 | 66 | 2.68e-18 | 79.0 |
| MsG0380016746.01.T01 | MTR_0147s0010 | 37.168 | 113 | 58 | 2 | 25 | 137 | 74 | 173 | 5.73e-18 | 79.0 |
| MsG0380016746.01.T01 | MTR_2g029930 | 39.216 | 102 | 34 | 3 | 24 | 111 | 15 | 102 | 1.23e-17 | 73.6 |
| MsG0380016746.01.T01 | MTR_4g127670 | 39.130 | 115 | 62 | 3 | 27 | 137 | 23 | 133 | 3.82e-16 | 73.6 |
| MsG0380016746.01.T01 | MTR_1g009750 | 38.182 | 110 | 65 | 3 | 11 | 119 | 10 | 117 | 1.36e-15 | 72.0 |
| MsG0380016746.01.T01 | MTR_2g008730 | 33.835 | 133 | 55 | 3 | 10 | 137 | 4 | 108 | 1.05e-14 | 69.3 |
| MsG0380016746.01.T01 | MTR_7g086790 | 50.794 | 63 | 30 | 1 | 75 | 137 | 17 | 78 | 1.46e-13 | 65.1 |
| MsG0380016746.01.T01 | MTR_4g012865 | 36.620 | 71 | 45 | 0 | 25 | 95 | 74 | 144 | 4.80e-12 | 60.1 |
| MsG0380016746.01.T01 | MTR_7g086810 | 30.702 | 114 | 53 | 1 | 24 | 137 | 2 | 89 | 5.28e-12 | 61.2 |
| MsG0380016746.01.T01 | MTR_3g086710 | 52.174 | 46 | 22 | 0 | 28 | 73 | 19 | 64 | 9.63e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016746.01.T01 | AT5G05340 | 80.909 | 110 | 21 | 0 | 26 | 135 | 28 | 137 | 2.49e-60 | 189 |
| MsG0380016746.01.T01 | AT5G58400 | 64.062 | 128 | 45 | 1 | 12 | 138 | 13 | 140 | 2.11e-53 | 171 |
| MsG0380016746.01.T01 | AT5G06720 | 56.296 | 135 | 58 | 1 | 5 | 138 | 8 | 142 | 1.39e-49 | 161 |
| MsG0380016746.01.T01 | AT5G06730 | 54.074 | 135 | 61 | 1 | 5 | 138 | 9 | 143 | 6.90e-48 | 158 |
| MsG0380016746.01.T01 | AT5G58390 | 59.200 | 125 | 51 | 0 | 14 | 138 | 7 | 131 | 7.26e-46 | 151 |
| MsG0380016746.01.T01 | AT1G49570 | 56.637 | 113 | 49 | 0 | 26 | 138 | 46 | 158 | 2.97e-43 | 145 |
| MsG0380016746.01.T01 | AT5G19890 | 57.364 | 129 | 49 | 2 | 9 | 137 | 14 | 136 | 5.74e-43 | 144 |
| MsG0380016746.01.T01 | AT4G08780 | 57.895 | 114 | 48 | 0 | 24 | 137 | 20 | 133 | 7.64e-42 | 142 |
| MsG0380016746.01.T01 | AT4G08770 | 58.261 | 115 | 48 | 0 | 24 | 138 | 20 | 134 | 8.87e-42 | 142 |
| MsG0380016746.01.T01 | AT2G22420 | 52.672 | 131 | 62 | 0 | 7 | 137 | 2 | 132 | 1.89e-41 | 140 |
| MsG0380016746.01.T01 | AT4G16270 | 57.273 | 110 | 47 | 0 | 28 | 137 | 50 | 159 | 4.89e-41 | 140 |
| MsG0380016746.01.T01 | AT5G19880 | 51.908 | 131 | 58 | 2 | 9 | 137 | 9 | 136 | 5.27e-41 | 139 |
| MsG0380016746.01.T01 | AT1G14550 | 51.163 | 129 | 61 | 1 | 12 | 138 | 8 | 136 | 5.30e-41 | 139 |
| MsG0380016746.01.T01 | AT3G01190 | 50.376 | 133 | 63 | 3 | 4 | 135 | 1 | 131 | 7.96e-41 | 139 |
| MsG0380016746.01.T01 | AT2G38390 | 50.758 | 132 | 65 | 0 | 4 | 135 | 7 | 138 | 1.04e-40 | 139 |
| MsG0380016746.01.T01 | AT1G44970 | 57.759 | 116 | 49 | 0 | 20 | 135 | 37 | 152 | 3.27e-40 | 137 |
| MsG0380016746.01.T01 | AT3G32980 | 53.125 | 128 | 60 | 0 | 10 | 137 | 13 | 140 | 3.81e-40 | 137 |
| MsG0380016746.01.T01 | AT1G14540 | 52.000 | 125 | 60 | 0 | 14 | 138 | 7 | 131 | 7.92e-40 | 136 |
| MsG0380016746.01.T01 | AT3G49120 | 55.357 | 112 | 50 | 0 | 26 | 137 | 30 | 141 | 6.74e-39 | 134 |
| MsG0380016746.01.T01 | AT3G50990 | 55.652 | 115 | 51 | 0 | 23 | 137 | 36 | 150 | 9.48e-39 | 134 |
| MsG0380016746.01.T01 | AT4G36430 | 52.679 | 112 | 53 | 0 | 23 | 134 | 25 | 136 | 1.38e-38 | 133 |
| MsG0380016746.01.T01 | AT3G49110 | 54.386 | 114 | 52 | 0 | 24 | 137 | 29 | 142 | 3.46e-38 | 132 |
| MsG0380016746.01.T01 | AT2G38380 | 50.758 | 132 | 65 | 0 | 4 | 135 | 7 | 138 | 4.64e-38 | 132 |
| MsG0380016746.01.T01 | AT5G66390 | 55.856 | 111 | 49 | 0 | 28 | 138 | 33 | 143 | 1.22e-37 | 130 |
| MsG0380016746.01.T01 | AT2G18150 | 43.448 | 145 | 69 | 1 | 7 | 138 | 2 | 146 | 1.44e-37 | 130 |
| MsG0380016746.01.T01 | AT2G18140 | 50.000 | 118 | 59 | 0 | 21 | 138 | 28 | 145 | 4.23e-37 | 129 |
| MsG0380016746.01.T01 | AT2G35380 | 51.724 | 116 | 56 | 0 | 20 | 135 | 22 | 137 | 2.04e-36 | 127 |
| MsG0380016746.01.T01 | AT1G68850 | 46.847 | 111 | 59 | 0 | 28 | 138 | 30 | 140 | 3.26e-36 | 127 |
| MsG0380016746.01.T01 | AT5G42180 | 46.875 | 128 | 66 | 2 | 11 | 137 | 5 | 131 | 2.33e-34 | 122 |
| MsG0380016746.01.T01 | AT3G03670 | 47.287 | 129 | 66 | 2 | 8 | 135 | 2 | 129 | 5.14e-34 | 121 |
| MsG0380016746.01.T01 | AT1G05260 | 48.000 | 125 | 62 | 3 | 12 | 135 | 9 | 131 | 8.93e-34 | 120 |
| MsG0380016746.01.T01 | AT1G77100 | 49.242 | 132 | 59 | 3 | 11 | 136 | 1 | 130 | 2.12e-33 | 119 |
| MsG0380016746.01.T01 | AT4G11290 | 45.255 | 137 | 68 | 3 | 9 | 139 | 1 | 136 | 2.58e-33 | 119 |
| MsG0380016746.01.T01 | AT5G15180 | 45.312 | 128 | 65 | 4 | 11 | 135 | 12 | 137 | 3.20e-33 | 119 |
| MsG0380016746.01.T01 | AT4G25980 | 45.600 | 125 | 65 | 2 | 13 | 137 | 56 | 177 | 4.30e-32 | 115 |
| MsG0380016746.01.T01 | AT2G41480 | 47.619 | 126 | 60 | 4 | 14 | 137 | 13 | 134 | 6.33e-32 | 115 |
| MsG0380016746.01.T01 | AT5G64120 | 54.808 | 104 | 43 | 2 | 32 | 135 | 39 | 138 | 8.42e-32 | 115 |
| MsG0380016746.01.T01 | AT5G14130 | 44.275 | 131 | 71 | 2 | 9 | 138 | 13 | 142 | 1.50e-31 | 115 |
| MsG0380016746.01.T01 | AT4G25980 | 45.600 | 125 | 65 | 2 | 13 | 137 | 11 | 132 | 2.57e-31 | 114 |
| MsG0380016746.01.T01 | AT5G14130 | 44.275 | 131 | 71 | 2 | 9 | 138 | 54 | 183 | 2.60e-31 | 115 |
| MsG0380016746.01.T01 | AT4G26010 | 46.341 | 123 | 65 | 1 | 16 | 138 | 10 | 131 | 3.09e-31 | 113 |
| MsG0380016746.01.T01 | AT4G33420 | 48.148 | 108 | 55 | 1 | 28 | 135 | 37 | 143 | 3.22e-31 | 114 |
| MsG0380016746.01.T01 | AT5G17820 | 47.200 | 125 | 62 | 2 | 13 | 137 | 9 | 129 | 4.26e-31 | 113 |
| MsG0380016746.01.T01 | AT4G26010 | 46.341 | 123 | 65 | 1 | 16 | 138 | 38 | 159 | 4.72e-31 | 114 |
| MsG0380016746.01.T01 | AT3G21770 | 43.966 | 116 | 63 | 2 | 20 | 135 | 21 | 134 | 5.16e-31 | 113 |
| MsG0380016746.01.T01 | AT4G33420 | 48.148 | 108 | 55 | 1 | 28 | 135 | 84 | 190 | 7.27e-31 | 114 |
| MsG0380016746.01.T01 | AT5G17820 | 47.200 | 125 | 62 | 2 | 13 | 137 | 62 | 182 | 8.82e-31 | 113 |
| MsG0380016746.01.T01 | AT5G51890 | 40.741 | 135 | 78 | 2 | 4 | 137 | 1 | 134 | 2.96e-30 | 111 |
| MsG0380016746.01.T01 | AT4G31760 | 43.939 | 132 | 68 | 2 | 4 | 135 | 7 | 132 | 3.67e-30 | 111 |
| MsG0380016746.01.T01 | AT4G33870 | 43.750 | 112 | 62 | 1 | 26 | 137 | 66 | 176 | 5.09e-30 | 112 |
| MsG0380016746.01.T01 | AT5G22410 | 46.269 | 134 | 67 | 3 | 7 | 139 | 6 | 135 | 5.54e-30 | 110 |
| MsG0380016746.01.T01 | AT1G05240 | 43.243 | 111 | 61 | 2 | 28 | 138 | 26 | 134 | 2.61e-29 | 108 |
| MsG0380016746.01.T01 | AT1G05250 | 43.243 | 111 | 61 | 2 | 28 | 138 | 26 | 134 | 2.61e-29 | 108 |
| MsG0380016746.01.T01 | AT5G64100 | 42.446 | 139 | 64 | 3 | 11 | 137 | 8 | 142 | 5.83e-29 | 108 |
| MsG0380016746.01.T01 | AT5G39580 | 44.615 | 130 | 66 | 3 | 12 | 139 | 7 | 132 | 1.62e-28 | 105 |
| MsG0380016746.01.T01 | AT1G34510 | 44.715 | 123 | 65 | 2 | 16 | 137 | 10 | 130 | 1.97e-28 | 106 |
| MsG0380016746.01.T01 | AT1G71695 | 43.243 | 111 | 62 | 1 | 28 | 137 | 44 | 154 | 5.16e-28 | 106 |
| MsG0380016746.01.T01 | AT2G24800 | 47.273 | 110 | 54 | 1 | 26 | 135 | 29 | 134 | 7.05e-28 | 103 |
| MsG0380016746.01.T01 | AT5G39580 | 44.615 | 130 | 66 | 3 | 12 | 139 | 7 | 132 | 1.18e-27 | 104 |
| MsG0380016746.01.T01 | AT2G24800 | 47.273 | 110 | 54 | 1 | 26 | 135 | 29 | 134 | 9.69e-27 | 102 |
| MsG0380016746.01.T01 | AT5G47000 | 44.275 | 131 | 70 | 2 | 11 | 139 | 16 | 145 | 1.22e-26 | 102 |
| MsG0380016746.01.T01 | AT1G30870 | 44.231 | 104 | 54 | 1 | 28 | 131 | 51 | 150 | 1.57e-26 | 102 |
| MsG0380016746.01.T01 | AT2G39040 | 43.103 | 116 | 64 | 2 | 22 | 136 | 40 | 154 | 1.76e-26 | 102 |
| MsG0380016746.01.T01 | AT3G28200 | 43.103 | 116 | 57 | 2 | 23 | 133 | 16 | 127 | 6.45e-26 | 99.8 |
| MsG0380016746.01.T01 | AT4G17690 | 43.443 | 122 | 66 | 2 | 20 | 139 | 18 | 138 | 2.38e-25 | 98.6 |
| MsG0380016746.01.T01 | AT4G21960 | 42.017 | 119 | 66 | 2 | 21 | 138 | 24 | 140 | 1.41e-24 | 96.7 |
| MsG0380016746.01.T01 | AT2G34060 | 46.154 | 117 | 58 | 4 | 25 | 137 | 39 | 154 | 1.73e-24 | 96.7 |
| MsG0380016746.01.T01 | AT5G40150 | 41.322 | 121 | 62 | 2 | 23 | 138 | 27 | 143 | 2.27e-24 | 95.9 |
| MsG0380016746.01.T01 | AT1G24110 | 42.537 | 134 | 72 | 3 | 9 | 138 | 1 | 133 | 2.80e-24 | 95.9 |
| MsG0380016746.01.T01 | AT5G67400 | 41.304 | 138 | 69 | 4 | 9 | 135 | 1 | 137 | 3.01e-24 | 95.5 |
| MsG0380016746.01.T01 | AT3G49960 | 43.066 | 137 | 68 | 4 | 9 | 135 | 1 | 137 | 9.31e-24 | 94.4 |
| MsG0380016746.01.T01 | AT2G18980 | 44.361 | 133 | 63 | 5 | 12 | 138 | 7 | 134 | 1.04e-23 | 94.0 |
| MsG0380016746.01.T01 | AT5G64110 | 41.791 | 134 | 65 | 4 | 12 | 137 | 11 | 139 | 1.49e-23 | 94.0 |
| MsG0380016746.01.T01 | AT2G37130 | 36.752 | 117 | 71 | 2 | 24 | 139 | 26 | 140 | 6.29e-23 | 92.0 |
| MsG0380016746.01.T01 | AT2G43480 | 36.641 | 131 | 77 | 3 | 9 | 137 | 16 | 142 | 5.78e-22 | 89.7 |
| MsG0380016746.01.T01 | AT4G37520 | 40.870 | 115 | 65 | 2 | 26 | 137 | 25 | 139 | 1.15e-21 | 88.6 |
| MsG0380016746.01.T01 | AT4G37530 | 40.833 | 120 | 68 | 2 | 21 | 137 | 20 | 139 | 1.72e-21 | 87.4 |
| MsG0380016746.01.T01 | AT4G37520 | 41.441 | 111 | 62 | 2 | 26 | 133 | 25 | 135 | 1.81e-21 | 88.2 |
| MsG0380016746.01.T01 | AT3G17070 | 41.045 | 134 | 68 | 4 | 14 | 138 | 17 | 148 | 2.24e-21 | 88.2 |
| MsG0380016746.01.T01 | AT2G37130 | 37.273 | 110 | 66 | 2 | 31 | 139 | 2 | 109 | 2.72e-21 | 87.4 |
| MsG0380016746.01.T01 | AT4G37530 | 40.833 | 120 | 68 | 2 | 21 | 137 | 20 | 139 | 4.22e-21 | 87.0 |
| MsG0380016746.01.T01 | AT5G24070 | 40.708 | 113 | 61 | 3 | 27 | 137 | 34 | 142 | 5.87e-21 | 87.0 |
| MsG0380016746.01.T01 | AT4G30170 | 40.171 | 117 | 61 | 4 | 26 | 138 | 25 | 136 | 1.01e-17 | 78.2 |
| MsG0380016746.01.T01 | AT2G35380 | 65.217 | 46 | 16 | 0 | 90 | 135 | 4 | 49 | 1.31e-12 | 63.2 |
Find 36 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATTTCTCCTCATAAT+AGG | 0.184669 | 3:+87348657 | MsG0380016746.01.T01:CDS |
| GTTAATCTAGAACAACTTAA+AGG | 0.237686 | 3:-87348621 | None:intergenic |
| AGTGAAACTTATTTGTTTAG+AGG | 0.259691 | 3:+87348583 | MsG0380016746.01.T01:five_prime_UTR |
| TTGGACAATGGAAGAGAGTT+TGG | 0.300332 | 3:-87348727 | None:intergenic |
| TTCTATTTCTCCTCATAATA+GGG | 0.333578 | 3:+87348658 | MsG0380016746.01.T01:CDS |
| TAGATTAACAATGTTCAGTT+TGG | 0.377384 | 3:+87348635 | MsG0380016746.01.T01:CDS |
| CCTCGAACAGAGTTCCTATT+CGG | 0.377487 | 3:-87351334 | None:intergenic |
| TGTTTAGAGGATTTAATCAA+TGG | 0.420902 | 3:+87348596 | MsG0380016746.01.T01:exon |
| CTCGAACAGAGTTCCTATTC+GGG | 0.444608 | 3:-87351333 | None:intergenic |
| TGGACAATGGAAGAGAGTTT+GGG | 0.453796 | 3:-87348726 | None:intergenic |
| AGAAGAACGCACTCCCGAAT+AGG | 0.461469 | 3:+87351320 | MsG0380016746.01.T01:CDS |
| TTGATATAGCGGATTGCACT+TGG | 0.468796 | 3:-87348752 | None:intergenic |
| TAGCGGATTGCACTTGGCGT+TGG | 0.477054 | 3:-87348746 | None:intergenic |
| AATTTGATGTGTCATCTAGT+AGG | 0.477448 | 3:-87351288 | None:intergenic |
| TCAGCACATGATACAACTCC+TGG | 0.479117 | 3:-87351403 | None:intergenic |
| CATTGGCACTCCCTATTATG+AGG | 0.497408 | 3:-87348668 | None:intergenic |
| AGCAATCGTGGAAGAACAAT+CGG | 0.497821 | 3:-87348803 | None:intergenic |
| TTGCAATTATAGGGGTGCGA+TGG | 0.506694 | 3:+87351259 | MsG0380016746.01.T01:intron |
| TGCAATTATAGGGGTGCGAT+GGG | 0.518318 | 3:+87351260 | MsG0380016746.01.T01:intron |
| TATATCAAAGGAGGCACGAA+TGG | 0.526328 | 3:+87348767 | MsG0380016746.01.T01:CDS |
| GTTTGTAGAGAGTTGTGCAT+TGG | 0.533430 | 3:-87348685 | None:intergenic |
| TTGCACTTGGCGTTGGACAA+TGG | 0.534086 | 3:-87348739 | None:intergenic |
| AACAGAGTCTGTGGCAGCAA+TGG | 0.535017 | 3:-87351434 | None:intergenic |
| CCGAATAGGAACTCTGTTCG+AGG | 0.537065 | 3:+87351334 | MsG0380016746.01.T01:CDS |
| GTTCTTGAGAAGAGAGGTGT+GGG | 0.540115 | 3:-87348535 | None:intergenic |
| ATATCAAAGGAGGCACGAAT+GGG | 0.545501 | 3:+87348768 | MsG0380016746.01.T01:CDS |
| TCGTGCCTCCTTTGATATAG+CGG | 0.546698 | 3:-87348763 | None:intergenic |
| TGTTCTTGAGAAGAGAGGTG+TGG | 0.548915 | 3:-87348536 | None:intergenic |
| TTCTTTGTTCTTGAGAAGAG+AGG | 0.555331 | 3:-87348541 | None:intergenic |
| GCCGTAGAGAACATATGTCC+AGG | 0.557511 | 3:+87351385 | MsG0380016746.01.T01:CDS |
| TCCTGGACATATGTTCTCTA+CGG | 0.565428 | 3:-87351386 | None:intergenic |
| AGTCTGTGGCAGCAATGGCT+AGG | 0.583680 | 3:-87351429 | None:intergenic |
| AGTGCAATCCGCTATATCAA+AGG | 0.607186 | 3:+87348755 | MsG0380016746.01.T01:CDS |
| TACAATTGCAACAGAGTCTG+TGG | 0.617557 | 3:-87351443 | None:intergenic |
| GCAATCCGCTATATCAAAGG+AGG | 0.647372 | 3:+87348758 | MsG0380016746.01.T01:CDS |
| TTACATTGACAAAGCAATCG+TGG | 0.667907 | 3:-87348815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTAATTTTTTTTT+TGG | + | Chr3:87350306-87350325 | MsG0380016746.01.T01:intron | 0.0% |
| !! | AAAAAATTAAATTAACATGT+CGG | + | Chr3:87349403-87349422 | MsG0380016746.01.T01:intron | 10.0% |
| !! | AATAAAAATATTGAGAATAA+TGG | + | Chr3:87351054-87351073 | MsG0380016746.01.T01:intron | 10.0% |
| !! | GTTGAAATAATAAAAAATAT+AGG | + | Chr3:87349066-87349085 | MsG0380016746.01.T01:intron | 10.0% |
| !! | TACTTAAATATAATTTAAAC+CGG | + | Chr3:87349348-87349367 | MsG0380016746.01.T01:intron | 10.0% |
| !!! | TAGTTCATTTAATAAATTTT+AGG | - | Chr3:87349039-87349058 | None:intergenic | 10.0% |
| !! | AACAATTATGAAAATTAACA+TGG | + | Chr3:87350264-87350283 | MsG0380016746.01.T01:intron | 15.0% |
| !! | ATCATACATAAAATATTTAG+TGG | + | Chr3:87350955-87350974 | MsG0380016746.01.T01:intron | 15.0% |
| !! | TTCTTTCAAAAAAAATTAAG+TGG | - | Chr3:87350466-87350485 | None:intergenic | 15.0% |
| !!! | AATTGCTTTGAAAAAATATA+TGG | - | Chr3:87348875-87348894 | None:intergenic | 15.0% |
| !! | AAAAAAAAACTTAATACCCA+TGG | - | Chr3:87349812-87349831 | None:intergenic | 20.0% |
| !! | AACGTTAAATGAATATATAG+CGG | + | Chr3:87350646-87350665 | MsG0380016746.01.T01:intron | 20.0% |
| !! | ACATTTCAAGATATTAACTT+CGG | - | Chr3:87350171-87350190 | None:intergenic | 20.0% |
| !! | ATATACTTACTTGCAATTAT+AGG | + | Chr3:87351249-87351268 | MsG0380016746.01.T01:intron | 20.0% |
| !! | ATGTATATGTGACTTAAAAT+TGG | + | Chr3:87350187-87350206 | MsG0380016746.01.T01:intron | 20.0% |
| !! | GTAATATTATATACATAACC+CGG | - | Chr3:87348933-87348952 | None:intergenic | 20.0% |
| !! | TAGTAATAGTAAGAGTTATA+GGG | + | Chr3:87349747-87349766 | MsG0380016746.01.T01:intron | 20.0% |
| !! | TATACTTACTTGCAATTATA+GGG | + | Chr3:87351250-87351269 | MsG0380016746.01.T01:intron | 20.0% |
| !! | TTATCTTGAACATCTTAATT+AGG | - | Chr3:87350108-87350127 | None:intergenic | 20.0% |
| !! | TTGATACTAGTATATTTGTT+CGG | + | Chr3:87348901-87348920 | MsG0380016746.01.T01:intron | 20.0% |
| !!! | TACATAAAAAAAGTGTTAGT+AGG | + | Chr3:87350004-87350023 | MsG0380016746.01.T01:intron | 20.0% |
| !!! | TACTAGCTATTTTTTTTGAA+AGG | - | Chr3:87349732-87349751 | None:intergenic | 20.0% |
| !!! | TTACTACTATTGATTTAAAG+CGG | + | Chr3:87351117-87351136 | MsG0380016746.01.T01:intron | 20.0% |
| !!! | TTTTTATCTTCATTAAACTC+CGG | - | Chr3:87349370-87349389 | None:intergenic | 20.0% |
| ! | AAGAATTTCATCTCGTATTT+AGG | - | Chr3:87351186-87351205 | None:intergenic | 25.0% |
| ! | AGTGAAACTTATTTGTTTAG+AGG | + | Chr3:87348583-87348602 | MsG0380016746.01.T01:five_prime_UTR | 25.0% |
| ! | AGTTCAAAGAAGATTTACAA+AGG | + | Chr3:87349182-87349201 | MsG0380016746.01.T01:intron | 25.0% |
| ! | ATACTTACTTGCAATTATAG+GGG | + | Chr3:87351251-87351270 | MsG0380016746.01.T01:intron | 25.0% |
| ! | ATGTGATAACATCTTTGATA+TGG | - | Chr3:87349222-87349241 | None:intergenic | 25.0% |
| ! | CTAGTAATAGTAAGAGTTAT+AGG | + | Chr3:87349746-87349765 | MsG0380016746.01.T01:intron | 25.0% |
| ! | TAATAGACAATTGTCAATGA+TGG | - | Chr3:87349309-87349328 | None:intergenic | 25.0% |
| ! | TAGATTAACAATGTTCAGTT+TGG | + | Chr3:87348635-87348654 | MsG0380016746.01.T01:CDS | 25.0% |
| ! | TCAAACCCTATTAAAACATT+TGG | + | Chr3:87350143-87350162 | MsG0380016746.01.T01:intron | 25.0% |
| ! | TGTGATAACATCTTTGATAT+GGG | - | Chr3:87349221-87349240 | None:intergenic | 25.0% |
| ! | TGTTTAGAGGATTTAATCAA+TGG | + | Chr3:87348596-87348615 | MsG0380016746.01.T01:exon | 25.0% |
| !! | AAAAAAAAGCATGATATGCA+AGG | + | Chr3:87349776-87349795 | MsG0380016746.01.T01:intron | 25.0% |
| !! | AGAAATGCTACTTAATGAAA+TGG | + | Chr3:87350482-87350501 | MsG0380016746.01.T01:intron | 25.0% |
| !! | GTTAATCTAGAACAACTTAA+AGG | - | Chr3:87348624-87348643 | None:intergenic | 25.0% |
| !! | TTCTATTTCTCCTCATAATA+GGG | + | Chr3:87348658-87348677 | MsG0380016746.01.T01:CDS | 25.0% |
| AAAAAACTTAATACCCATGG+TGG | - | Chr3:87349809-87349828 | None:intergenic | 30.0% | |
| AAAAACTTAATACCCATGGT+GGG | - | Chr3:87349808-87349827 | None:intergenic | 30.0% | |
| AAATCATCATAGGGATAAAG+TGG | + | Chr3:87349838-87349857 | MsG0380016746.01.T01:intron | 30.0% | |
| AATTTCATCTCGTATTTAGG+TGG | - | Chr3:87351183-87351202 | None:intergenic | 30.0% | |
| AATTTGATGTGTCATCTAGT+AGG | - | Chr3:87351291-87351310 | None:intergenic | 30.0% | |
| ACATAACATTGTTGCATTCA+TGG | - | Chr3:87349603-87349622 | None:intergenic | 30.0% | |
| ATTGAGAATAATGGTGAAAG+TGG | + | Chr3:87351063-87351082 | MsG0380016746.01.T01:intron | 30.0% | |
| GTAGTAACACATACAAAGTA+AGG | - | Chr3:87351104-87351123 | None:intergenic | 30.0% | |
| GTTTAATCATTATGCTTCCT+AGG | - | Chr3:87351225-87351244 | None:intergenic | 30.0% | |
| TAGAAATTAATCTCTCGAAC+CGG | - | Chr3:87349663-87349682 | None:intergenic | 30.0% | |
| TCAAATCTTCTTGAAGACAA+TGG | - | Chr3:87351153-87351172 | None:intergenic | 30.0% | |
| TTTATCCCTATGATGATTTG+TGG | - | Chr3:87349837-87349856 | None:intergenic | 30.0% | |
| ! | GATGACACATCAAATTTTAC+TGG | + | Chr3:87351295-87351314 | MsG0380016746.01.T01:CDS | 30.0% |
| ! | GTTCTATTTCTCCTCATAAT+AGG | + | Chr3:87348657-87348676 | MsG0380016746.01.T01:CDS | 30.0% |
| ! | TTATCCCTATGATGATTTGT+GGG | - | Chr3:87349836-87349855 | None:intergenic | 30.0% |
| AAAACGTTGAAGTGAACTCT+GGG | + | Chr3:87349133-87349152 | MsG0380016746.01.T01:intron | 35.0% | |
| AGAAATTAATCTCTCGAACC+GGG | - | Chr3:87349662-87349681 | None:intergenic | 35.0% | |
| GAAATTAGTGACACATGTGA+AGG | - | Chr3:87348842-87348861 | None:intergenic | 35.0% | |
| GAGAACTTTGCCAAACATTA+TGG | + | Chr3:87349631-87349650 | MsG0380016746.01.T01:intron | 35.0% | |
| GAGAGATTAATTTCTACCGT+CGG | + | Chr3:87349667-87349686 | MsG0380016746.01.T01:intron | 35.0% | |
| GATAACATCTTTGATATGGG+TGG | - | Chr3:87349218-87349237 | None:intergenic | 35.0% | |
| TTACATTGACAAAGCAATCG+TGG | - | Chr3:87348818-87348837 | None:intergenic | 35.0% | |
| TTCTTTGTTCTTGAGAAGAG+AGG | - | Chr3:87348544-87348563 | None:intergenic | 35.0% | |
| TTTCCCCACAAATCATCATA+GGG | + | Chr3:87349829-87349848 | MsG0380016746.01.T01:intron | 35.0% | |
| ! | TATCCCTATGATGATTTGTG+GGG | - | Chr3:87349835-87349854 | None:intergenic | 35.0% |
| ! | TTTTCCCCACAAATCATCAT+AGG | + | Chr3:87349828-87349847 | MsG0380016746.01.T01:intron | 35.0% |
| !! | TATATTTGTTCGGTGTTGTC+CGG | + | Chr3:87348911-87348930 | MsG0380016746.01.T01:intron | 35.0% |
| !! | TGTTACTTTAGTTGATGCCT+AGG | + | Chr3:87351205-87351224 | MsG0380016746.01.T01:intron | 35.0% |
| !!! | CGGAGCCAAATGTTTTAATA+GGG | - | Chr3:87350151-87350170 | None:intergenic | 35.0% |
| !!! | TCGGAGCCAAATGTTTTAAT+AGG | - | Chr3:87350152-87350171 | None:intergenic | 35.0% |
| AGCAATCGTGGAAGAACAAT+CGG | - | Chr3:87348806-87348825 | None:intergenic | 40.0% | |
| AGTGCAATCCGCTATATCAA+AGG | + | Chr3:87348755-87348774 | MsG0380016746.01.T01:CDS | 40.0% | |
| ATCCAATAACCCATCACTTC+TGG | - | Chr3:87349568-87349587 | None:intergenic | 40.0% | |
| CAAAACGTTGAAGTGAACTC+TGG | + | Chr3:87349132-87349151 | MsG0380016746.01.T01:intron | 40.0% | |
| CAAGCTTAACCAGAAGTGAT+GGG | + | Chr3:87349556-87349575 | MsG0380016746.01.T01:intron | 40.0% | |
| CATTGTTGCATTCATGGAGT+TGG | - | Chr3:87349597-87349616 | None:intergenic | 40.0% | |
| GTTTGTAGAGAGTTGTGCAT+TGG | - | Chr3:87348688-87348707 | None:intergenic | 40.0% | |
| TACAATTGCAACAGAGTCTG+TGG | - | Chr3:87351446-87351465 | None:intergenic | 40.0% | |
| TCAAGCTTAACCAGAAGTGA+TGG | + | Chr3:87349555-87349574 | MsG0380016746.01.T01:intron | 40.0% | |
| TCCTGGACATATGTTCTCTA+CGG | - | Chr3:87351389-87351408 | None:intergenic | 40.0% | |
| TGGACAATGGAAGAGAGTTT+GGG | - | Chr3:87348729-87348748 | None:intergenic | 40.0% | |
| TGTTATCACATCGACGACAA+CGG | + | Chr3:87349231-87349250 | MsG0380016746.01.T01:intron | 40.0% | |
| TTGGACAATGGAAGAGAGTT+TGG | - | Chr3:87348730-87348749 | None:intergenic | 40.0% | |
| ! | ATATCAAAGGAGGCACGAAT+GGG | + | Chr3:87348768-87348787 | MsG0380016746.01.T01:CDS | 40.0% |
| ! | TATATCAAAGGAGGCACGAA+TGG | + | Chr3:87348767-87348786 | MsG0380016746.01.T01:CDS | 40.0% |
| !! | AACCAGAAGTGATGGGTTAT+TGG | + | Chr3:87349563-87349582 | MsG0380016746.01.T01:intron | 40.0% |
| !! | ACTCAAAAGCACTAGGATGA+TGG | + | Chr3:87349520-87349539 | MsG0380016746.01.T01:intron | 40.0% |
| !! | ACTTGTCACTCAAAAGCACT+AGG | + | Chr3:87349513-87349532 | MsG0380016746.01.T01:intron | 40.0% |
| !! | ATATTTGTTCGGTGTTGTCC+GGG | + | Chr3:87348912-87348931 | MsG0380016746.01.T01:intron | 40.0% |
| !! | TTGATATAGCGGATTGCACT+TGG | - | Chr3:87348755-87348774 | None:intergenic | 40.0% |
| ATTAATCTCTCGAACCGGGT+AGG | - | Chr3:87349658-87349677 | None:intergenic | 45.0% | |
| ATTTCTACCGTCGGATGTAG+AGG | + | Chr3:87349676-87349695 | MsG0380016746.01.T01:intron | 45.0% | |
| CATTGGCACTCCCTATTATG+AGG | - | Chr3:87348671-87348690 | None:intergenic | 45.0% | |
| CCAAACATTATGGTCCTACC+CGG | + | Chr3:87349641-87349660 | MsG0380016746.01.T01:intron | 45.0% | |
| CCTCGAACAGAGTTCCTATT+CGG | - | Chr3:87351337-87351356 | None:intergenic | 45.0% | |
| CTCGAACAGAGTTCCTATTC+GGG | - | Chr3:87351336-87351355 | None:intergenic | 45.0% | |
| GCAAGGATAAAACCCACCAT+GGG | + | Chr3:87349793-87349812 | MsG0380016746.01.T01:intron | 45.0% | |
| GCAATCCGCTATATCAAAGG+AGG | + | Chr3:87348758-87348777 | MsG0380016746.01.T01:CDS | 45.0% | |
| TCAGCACATGATACAACTCC+TGG | - | Chr3:87351406-87351425 | None:intergenic | 45.0% | |
| TCGTGCCTCCTTTGATATAG+CGG | - | Chr3:87348766-87348785 | None:intergenic | 45.0% | |
| TGCAAGGATAAAACCCACCA+TGG | + | Chr3:87349792-87349811 | MsG0380016746.01.T01:intron | 45.0% | |
| ! | TGCAATTATAGGGGTGCGAT+GGG | + | Chr3:87351260-87351279 | MsG0380016746.01.T01:intron | 45.0% |
| ! | TTGCAATTATAGGGGTGCGA+TGG | + | Chr3:87351259-87351278 | MsG0380016746.01.T01:intron | 45.0% |
| !! | AAAATTAAACTTAAATAAAA+TGG | + | Chr3:87350769-87350788 | MsG0380016746.01.T01:intron | 5.0% |
| !! | AAATTAAACTTAAATAAAAT+GGG | + | Chr3:87350770-87350789 | MsG0380016746.01.T01:intron | 5.0% |
| !!! | AAAAGTATAAATTAAAAATA+TGG | + | Chr3:87350395-87350414 | MsG0380016746.01.T01:intron | 5.0% |
| AACAGAGTCTGTGGCAGCAA+TGG | - | Chr3:87351437-87351456 | None:intergenic | 50.0% | |
| ACTTGAAGCTTGCCCTGATC+TGG | - | Chr3:87349165-87349184 | None:intergenic | 50.0% | |
| AGAAGAACGCACTCCCGAAT+AGG | + | Chr3:87351320-87351339 | MsG0380016746.01.T01:CDS | 50.0% | |
| CCGAATAGGAACTCTGTTCG+AGG | + | Chr3:87351334-87351353 | MsG0380016746.01.T01:CDS | 50.0% | |
| CCGGGTAGGACCATAATGTT+TGG | - | Chr3:87349644-87349663 | None:intergenic | 50.0% | |
| CGAATGTCCTCTACATCCGA+CGG | - | Chr3:87349686-87349705 | None:intergenic | 50.0% | |
| GCCGTAGAGAACATATGTCC+AGG | + | Chr3:87351385-87351404 | MsG0380016746.01.T01:CDS | 50.0% | |
| ! | TTGCACTTGGCGTTGGACAA+TGG | - | Chr3:87348742-87348761 | None:intergenic | 50.0% |
| AGTCTGTGGCAGCAATGGCT+AGG | - | Chr3:87351432-87351451 | None:intergenic | 55.0% | |
| TCTGGGTGCTCACCAGATCA+GGG | + | Chr3:87349150-87349169 | MsG0380016746.01.T01:intron | 55.0% | |
| !! | TAGCGGATTGCACTTGGCGT+TGG | - | Chr3:87348749-87348768 | None:intergenic | 55.0% |
| CTCTGGGTGCTCACCAGATC+AGG | + | Chr3:87349149-87349168 | MsG0380016746.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 87348538 | 87351477 | 87348538 | ID=MsG0380016746.01;Name=MsG0380016746.01 |
| Chr3 | mRNA | 87348538 | 87351477 | 87348538 | ID=MsG0380016746.01.T01;Parent=MsG0380016746.01;Name=MsG0380016746.01.T01;_AED=0.48;_eAED=0.49;_QI=77|1|0.5|1|1|1|2|0|141 |
| Chr3 | exon | 87348538 | 87348833 | 87348538 | ID=MsG0380016746.01.T01:exon:22489;Parent=MsG0380016746.01.T01 |
| Chr3 | exon | 87351271 | 87351477 | 87351271 | ID=MsG0380016746.01.T01:exon:22490;Parent=MsG0380016746.01.T01 |
| Chr3 | five_prime_UTR | 87348538 | 87348614 | 87348538 | ID=MsG0380016746.01.T01:five_prime_utr;Parent=MsG0380016746.01.T01 |
| Chr3 | CDS | 87348615 | 87348833 | 87348615 | ID=MsG0380016746.01.T01:cds;Parent=MsG0380016746.01.T01 |
| Chr3 | CDS | 87351271 | 87351477 | 87351271 | ID=MsG0380016746.01.T01:cds;Parent=MsG0380016746.01.T01 |
| Gene Sequence |
| Protein sequence |