Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021788.01.T01 | XP_003607319.1 | 94.02 | 301 | 18 | 0 | 1 | 301 | 29 | 329 | 0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021788.01.T01 | P23547 | 57.237 | 304 | 125 | 3 | 3 | 301 | 40 | 343 | 5.30E-120 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021788.01.T01 | G7JQL4 | 94.020 | 301 | 18 | 0 | 1 | 301 | 29 | 329 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0480021788.01 | 0.807838 | 4.156036e-50 | 2.339069e-47 |
| MsG0080048969.01 | MsG0480021788.01 | 0.813306 | 2.735678e-51 | 1.780120e-48 |
| MsG0180000017.01 | MsG0480021788.01 | 0.803967 | 2.707244e-49 | 1.379111e-46 |
| MsG0180000040.01 | MsG0480021788.01 | 0.819979 | 8.740202e-53 | 6.828378e-50 |
| MsG0180000490.01 | MsG0480021788.01 | 0.804236 | 2.380473e-49 | 1.220953e-46 |
| MsG0180000655.01 | MsG0480021788.01 | 0.833054 | 6.647612e-56 | 7.568631e-53 |
| MsG0180000976.01 | MsG0480021788.01 | 0.824179 | 9.284312e-54 | 8.163213e-51 |
| MsG0180001827.01 | MsG0480021788.01 | 0.820609 | 6.266086e-53 | 4.981241e-50 |
| MsG0180003351.01 | MsG0480021788.01 | 0.800692 | 1.279273e-48 | 5.994992e-46 |
| MsG0180004687.01 | MsG0480021788.01 | 0.800052 | 1.726980e-48 | 7.962782e-46 |
| MsG0180006239.01 | MsG0480021788.01 | 0.808184 | 3.508757e-50 | 1.992941e-47 |
| MsG0280010584.01 | MsG0480021788.01 | 0.804594 | 2.004718e-49 | 1.037782e-46 |
| MsG0280011169.01 | MsG0480021788.01 | 0.806201 | 9.230408e-50 | 4.979934e-47 |
| MsG0280011207.01 | MsG0480021788.01 | 0.805363 | 1.384140e-49 | 7.308755e-47 |
| MsG0380012583.01 | MsG0480021788.01 | 0.829917 | 3.935863e-55 | 4.085044e-52 |
| MsG0380014144.01 | MsG0480021788.01 | 0.808985 | 2.366551e-50 | 1.372701e-47 |
| MsG0480019046.01 | MsG0480021788.01 | 0.803923 | 2.764493e-49 | 1.406753e-46 |
| MsG0480019193.01 | MsG0480021788.01 | 0.801242 | 9.877783e-49 | 4.694098e-46 |
| MsG0480019195.01 | MsG0480021788.01 | 0.800263 | 1.564491e-48 | 7.252523e-46 |
| MsG0480019752.01 | MsG0480021788.01 | 0.808519 | 2.976078e-50 | 1.705285e-47 |
| MsG0480021109.01 | MsG0480021788.01 | 0.802614 | 5.159635e-49 | 2.538835e-46 |
| MsG0480021788.01 | MsG0480021789.01 | 0.955282 | 4.337174e-113 | 1.298340e-107 |
| MsG0480021788.01 | MsG0480021895.01 | 0.832341 | 9.990877e-56 | 1.113369e-52 |
| MsG0480021788.01 | MsG0480022002.01 | 0.802467 | 5.533775e-49 | 2.712738e-46 |
| MsG0480021788.01 | MsG0480022411.01 | 0.845188 | 4.745647e-59 | 7.844991e-56 |
| MsG0480021788.01 | MsG0480022458.01 | 0.831831 | 1.335749e-55 | 1.466678e-52 |
| MsG0480021788.01 | MsG0480023104.01 | 0.804623 | 1.976987e-49 | 1.024168e-46 |
| MsG0480021788.01 | MsG0480023605.01 | 0.802984 | 4.328723e-49 | 2.150000e-46 |
| MsG0480021788.01 | MsG0580024386.01 | 0.801693 | 7.981605e-49 | 3.836225e-46 |
| MsG0480021788.01 | MsG0580024442.01 | 0.811682 | 6.197668e-51 | 3.860860e-48 |
| MsG0480021788.01 | MsG0580024448.01 | 0.831631 | 1.495973e-55 | 1.632746e-52 |
| MsG0480021788.01 | MsG0580024450.01 | 0.836253 | 1.042766e-56 | 1.307079e-53 |
| MsG0480021788.01 | MsG0580024768.01 | 0.838785 | 2.338871e-57 | 3.166007e-54 |
| MsG0480021788.01 | MsG0580025259.01 | 0.819144 | 1.354892e-52 | 1.034095e-49 |
| MsG0480021788.01 | MsG0580025301.01 | 0.805153 | 1.531739e-49 | 8.044638e-47 |
| MsG0480021788.01 | MsG0580027348.01 | 0.823174 | 1.596325e-53 | 1.364300e-50 |
| MsG0480021788.01 | MsG0580028092.01 | 0.808712 | 2.706756e-50 | 1.558671e-47 |
| MsG0480021788.01 | MsG0580029394.01 | 0.804210 | 2.409392e-49 | 1.235008e-46 |
| MsG0480021788.01 | MsG0680031204.01 | 0.830743 | 2.473265e-55 | 2.629264e-52 |
| MsG0480021788.01 | MsG0680031997.01 | 0.822620 | 2.148565e-53 | 1.807885e-50 |
| MsG0480021788.01 | MsG0680032000.01 | 0.816828 | 4.521164e-52 | 3.237967e-49 |
| MsG0480021788.01 | MsG0680032003.01 | 0.807437 | 5.058209e-50 | 2.817206e-47 |
| MsG0480021788.01 | MsG0680032191.01 | 0.817731 | 2.832900e-52 | 2.079745e-49 |
| MsG0480021788.01 | MsG0680035619.01 | 0.811750 | 5.987562e-51 | 3.737035e-48 |
| MsG0480021788.01 | MsG0780036583.01 | 0.828538 | 8.503164e-55 | 8.476674e-52 |
| MsG0480021788.01 | MsG0780036584.01 | 0.802082 | 6.640920e-49 | 3.223685e-46 |
| MsG0480021788.01 | MsG0780036613.01 | 0.852967 | 3.260238e-61 | 6.932726e-58 |
| MsG0480021788.01 | MsG0780036846.01 | 0.836835 | 7.411608e-57 | 9.452265e-54 |
| MsG0480021788.01 | MsG0780040154.01 | 0.805301 | 1.426333e-49 | 7.519406e-47 |
| MsG0480021788.01 | MsG0880041835.01 | 0.801194 | 1.010326e-48 | 4.795361e-46 |
| MsG0480021788.01 | MsG0880042922.01 | 0.863126 | 3.109916e-64 | 9.326463e-61 |
| MsG0480021788.01 | MsG0880044626.01 | 0.806401 | 8.374184e-50 | 4.540912e-47 |
| MsG0480021788.01 | MsG0880045377.01 | 0.845248 | 4.570770e-59 | 7.571130e-56 |
| MsG0480021788.01 | MsG0880045378.01 | 0.843069 | 1.757741e-58 | 2.718024e-55 |
| MsG0480021788.01 | MsG0880045400.01 | 0.834768 | 2.476033e-56 | 2.967222e-53 |
| MsG0480021788.01 | MsG0880045409.01 | 0.860019 | 2.764770e-63 | 7.449907e-60 |
| MsG0480021788.01 | MsG0880045411.01 | 0.816001 | 6.923125e-52 | 4.847396e-49 |
| MsG0480021788.01 | MsG0880045423.01 | 0.827415 | 1.584133e-54 | 1.528423e-51 |
| MsG0380015795.01 | MsG0480021788.01 | 0.807227 | 5.602109e-50 | 3.103251e-47 |
| MsG0380016042.01 | MsG0480021788.01 | 0.820874 | 5.444828e-53 | 4.360986e-50 |
| MsG0380016151.01 | MsG0480021788.01 | 0.804405 | 2.194326e-49 | 1.130412e-46 |
| MsG0380016746.01 | MsG0480021788.01 | 0.814444 | 1.535577e-51 | 1.030548e-48 |
| MsG0380017353.01 | MsG0480021788.01 | 0.801197 | 1.008527e-48 | 4.787216e-46 |
| MsG0380018035.01 | MsG0480021788.01 | 0.804984 | 1.661653e-49 | 8.689183e-47 |
| MsG0280007511.01 | MsG0480021788.01 | 0.824025 | 1.009201e-53 | 8.834350e-51 |
| MsG0280007653.01 | MsG0480021788.01 | 0.818451 | 1.947094e-52 | 1.458163e-49 |
| MsG0280009901.01 | MsG0480021788.01 | 0.813042 | 3.126359e-51 | 2.019775e-48 |
| MsG0280010455.01 | MsG0480021788.01 | 0.855201 | 7.394841e-62 | 1.693646e-58 |
| MsG0280010523.01 | MsG0480021788.01 | 0.833436 | 5.340363e-56 | 6.149837e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021788.01.T01 | MTR_4g076470 | 94.020 | 301 | 18 | 0 | 1 | 301 | 29 | 329 | 0.0 | 575 |
| MsG0480021788.01.T01 | MTR_4g076490 | 85.000 | 300 | 44 | 1 | 1 | 299 | 103 | 402 | 0.0 | 523 |
| MsG0480021788.01.T01 | MTR_4g076440 | 82.724 | 301 | 52 | 0 | 1 | 301 | 29 | 329 | 0.0 | 521 |
| MsG0480021788.01.T01 | MTR_4g076430 | 84.385 | 301 | 47 | 0 | 1 | 301 | 29 | 329 | 0.0 | 519 |
| MsG0480021788.01.T01 | MTR_4g076255 | 70.333 | 300 | 87 | 2 | 3 | 301 | 33 | 331 | 3.87e-151 | 426 |
| MsG0480021788.01.T01 | MTR_4g076500 | 61.111 | 306 | 113 | 5 | 2 | 301 | 85 | 390 | 8.77e-124 | 359 |
| MsG0480021788.01.T01 | MTR_4g076570 | 55.776 | 303 | 127 | 4 | 2 | 297 | 29 | 331 | 1.08e-117 | 343 |
| MsG0480021788.01.T01 | MTR_1g052430 | 55.375 | 307 | 126 | 5 | 2 | 299 | 39 | 343 | 2.40e-113 | 333 |
| MsG0480021788.01.T01 | MTR_2g034480 | 54.221 | 308 | 132 | 4 | 1 | 300 | 33 | 339 | 4.34e-107 | 316 |
| MsG0480021788.01.T01 | MTR_2g034470 | 52.922 | 308 | 136 | 4 | 1 | 300 | 1 | 307 | 1.22e-105 | 311 |
| MsG0480021788.01.T01 | MTR_2g034470 | 52.922 | 308 | 136 | 4 | 1 | 300 | 36 | 342 | 2.39e-105 | 311 |
| MsG0480021788.01.T01 | MTR_2g034440 | 52.104 | 309 | 138 | 5 | 1 | 300 | 28 | 335 | 8.05e-102 | 301 |
| MsG0480021788.01.T01 | MTR_7g081350 | 43.377 | 302 | 160 | 8 | 3 | 296 | 35 | 333 | 4.67e-77 | 238 |
| MsG0480021788.01.T01 | MTR_5g085580 | 41.935 | 310 | 164 | 8 | 2 | 296 | 32 | 340 | 8.08e-74 | 234 |
| MsG0480021788.01.T01 | MTR_7g081370 | 41.472 | 299 | 157 | 7 | 3 | 296 | 36 | 321 | 1.28e-70 | 221 |
| MsG0480021788.01.T01 | MTR_3g080410 | 40.256 | 313 | 173 | 8 | 2 | 300 | 33 | 345 | 2.27e-70 | 222 |
| MsG0480021788.01.T01 | MTR_4g052970 | 38.835 | 309 | 174 | 7 | 2 | 296 | 36 | 343 | 1.21e-69 | 221 |
| MsG0480021788.01.T01 | MTR_4g010200 | 38.658 | 313 | 178 | 6 | 2 | 300 | 40 | 352 | 9.76e-69 | 219 |
| MsG0480021788.01.T01 | MTR_2g086530 | 37.013 | 308 | 179 | 6 | 2 | 296 | 15 | 320 | 1.31e-66 | 213 |
| MsG0480021788.01.T01 | MTR_2g086530 | 37.013 | 308 | 179 | 6 | 2 | 296 | 36 | 341 | 1.66e-66 | 213 |
| MsG0480021788.01.T01 | MTR_4g084480 | 39.286 | 308 | 174 | 7 | 2 | 296 | 32 | 339 | 3.10e-66 | 212 |
| MsG0480021788.01.T01 | MTR_4g084480 | 39.286 | 308 | 174 | 7 | 2 | 296 | 39 | 346 | 3.25e-66 | 212 |
| MsG0480021788.01.T01 | MTR_4g084480 | 39.286 | 308 | 174 | 7 | 2 | 296 | 39 | 346 | 5.01e-66 | 212 |
| MsG0480021788.01.T01 | MTR_1g077990 | 38.782 | 312 | 179 | 8 | 2 | 301 | 38 | 349 | 1.64e-65 | 211 |
| MsG0480021788.01.T01 | MTR_4g069940 | 37.778 | 315 | 180 | 7 | 2 | 301 | 36 | 349 | 3.02e-65 | 212 |
| MsG0480021788.01.T01 | MTR_6g088885 | 34.727 | 311 | 190 | 6 | 3 | 300 | 35 | 345 | 3.73e-63 | 207 |
| MsG0480021788.01.T01 | MTR_1g056640 | 38.188 | 309 | 177 | 7 | 2 | 296 | 45 | 353 | 8.64e-63 | 206 |
| MsG0480021788.01.T01 | MTR_3g116510 | 37.013 | 308 | 178 | 7 | 4 | 296 | 37 | 343 | 1.44e-62 | 205 |
| MsG0480021788.01.T01 | MTR_4g114850 | 34.713 | 314 | 191 | 7 | 2 | 301 | 33 | 346 | 1.96e-62 | 201 |
| MsG0480021788.01.T01 | MTR_4g114850 | 34.713 | 314 | 191 | 7 | 2 | 301 | 33 | 346 | 1.99e-62 | 202 |
| MsG0480021788.01.T01 | MTR_4g114850 | 34.713 | 314 | 191 | 7 | 2 | 301 | 33 | 346 | 2.38e-62 | 202 |
| MsG0480021788.01.T01 | MTR_1g022160 | 37.460 | 315 | 182 | 8 | 2 | 301 | 31 | 345 | 3.33e-62 | 202 |
| MsG0480021788.01.T01 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.57e-61 | 202 |
| MsG0480021788.01.T01 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.65e-61 | 202 |
| MsG0480021788.01.T01 | MTR_1g022160 | 38.065 | 310 | 177 | 8 | 2 | 296 | 31 | 340 | 1.82e-61 | 202 |
| MsG0480021788.01.T01 | MTR_1g031900 | 37.333 | 300 | 172 | 6 | 5 | 288 | 34 | 333 | 1.98e-61 | 203 |
| MsG0480021788.01.T01 | MTR_1g031900 | 37.333 | 300 | 172 | 6 | 5 | 288 | 34 | 333 | 2.93e-61 | 202 |
| MsG0480021788.01.T01 | MTR_1g007810 | 37.061 | 313 | 172 | 9 | 2 | 296 | 23 | 328 | 6.90e-61 | 197 |
| MsG0480021788.01.T01 | MTR_2g019345 | 37.987 | 308 | 177 | 7 | 2 | 296 | 31 | 337 | 5.26e-60 | 196 |
| MsG0480021788.01.T01 | MTR_3g065460 | 36.424 | 302 | 176 | 6 | 4 | 289 | 33 | 334 | 2.15e-59 | 197 |
| MsG0480021788.01.T01 | MTR_8g102340 | 38.247 | 251 | 143 | 5 | 62 | 300 | 62 | 312 | 6.57e-58 | 193 |
| MsG0480021788.01.T01 | MTR_7g053500 | 35.647 | 317 | 177 | 12 | 2 | 296 | 33 | 344 | 4.12e-57 | 191 |
| MsG0480021788.01.T01 | MTR_5g078200 | 35.667 | 300 | 177 | 6 | 6 | 289 | 1 | 300 | 1.08e-56 | 192 |
| MsG0480021788.01.T01 | MTR_5g078200 | 35.430 | 302 | 179 | 6 | 4 | 289 | 32 | 333 | 1.23e-56 | 193 |
| MsG0480021788.01.T01 | MTR_8g012400 | 34.177 | 316 | 185 | 10 | 2 | 297 | 36 | 348 | 3.47e-55 | 186 |
| MsG0480021788.01.T01 | MTR_7g026340 | 35.048 | 311 | 183 | 9 | 2 | 298 | 30 | 335 | 4.32e-55 | 185 |
| MsG0480021788.01.T01 | MTR_4g088155 | 33.123 | 317 | 189 | 9 | 1 | 296 | 29 | 343 | 1.53e-54 | 184 |
| MsG0480021788.01.T01 | MTR_7g085390 | 35.855 | 304 | 176 | 9 | 10 | 296 | 41 | 342 | 2.73e-54 | 184 |
| MsG0480021788.01.T01 | MTR_3g083580 | 33.121 | 314 | 193 | 7 | 5 | 301 | 36 | 349 | 1.81e-53 | 182 |
| MsG0480021788.01.T01 | MTR_6g032820 | 34.653 | 303 | 179 | 8 | 12 | 296 | 43 | 344 | 9.39e-52 | 176 |
| MsG0480021788.01.T01 | MTR_4g132280 | 33.442 | 308 | 189 | 6 | 5 | 296 | 55 | 362 | 1.72e-51 | 177 |
| MsG0480021788.01.T01 | MTR_8g092070 | 33.443 | 305 | 187 | 8 | 12 | 301 | 51 | 354 | 2.56e-51 | 178 |
| MsG0480021788.01.T01 | MTR_8g085720 | 31.310 | 313 | 199 | 6 | 4 | 300 | 35 | 347 | 3.48e-49 | 171 |
| MsG0480021788.01.T01 | MTR_4g112025 | 33.544 | 316 | 187 | 10 | 1 | 297 | 38 | 349 | 2.61e-48 | 169 |
| MsG0480021788.01.T01 | MTR_7g053500 | 36.905 | 252 | 135 | 10 | 65 | 296 | 20 | 267 | 4.26e-47 | 162 |
| MsG0480021788.01.T01 | MTR_4g124440 | 32.680 | 306 | 189 | 9 | 6 | 296 | 40 | 343 | 5.18e-47 | 164 |
| MsG0480021788.01.T01 | MTR_8g012400 | 35.165 | 273 | 150 | 10 | 43 | 297 | 5 | 268 | 1.33e-46 | 161 |
| MsG0480021788.01.T01 | MTR_2g027560 | 33.882 | 304 | 179 | 10 | 12 | 296 | 45 | 345 | 3.86e-46 | 162 |
| MsG0480021788.01.T01 | MTR_1g053320 | 32.278 | 316 | 192 | 10 | 1 | 297 | 37 | 349 | 4.24e-46 | 162 |
| MsG0480021788.01.T01 | MTR_3g095050 | 33.443 | 305 | 185 | 10 | 12 | 301 | 51 | 352 | 4.64e-46 | 162 |
| MsG0480021788.01.T01 | MTR_3g116510 | 39.423 | 208 | 113 | 5 | 101 | 296 | 3 | 209 | 2.54e-45 | 156 |
| MsG0480021788.01.T01 | MTR_4g083500 | 33.333 | 312 | 186 | 10 | 2 | 296 | 51 | 357 | 7.75e-44 | 157 |
| MsG0480021788.01.T01 | MTR_3g031770 | 33.443 | 305 | 179 | 12 | 11 | 297 | 43 | 341 | 1.35e-43 | 155 |
| MsG0480021788.01.T01 | MTR_1g010120 | 34.539 | 304 | 181 | 10 | 12 | 299 | 43 | 344 | 6.66e-43 | 153 |
| MsG0480021788.01.T01 | MTR_3g108600 | 32.792 | 308 | 172 | 9 | 5 | 297 | 41 | 328 | 2.18e-39 | 144 |
| MsG0480021788.01.T01 | MTR_4g036680 | 45.333 | 150 | 69 | 4 | 151 | 299 | 39 | 176 | 2.03e-33 | 122 |
| MsG0480021788.01.T01 | MTR_4g036680 | 52.632 | 57 | 27 | 0 | 2 | 58 | 29 | 85 | 3.04e-13 | 68.2 |
| MsG0480021788.01.T01 | MTR_4g036775 | 57.732 | 97 | 40 | 1 | 204 | 299 | 80 | 176 | 3.83e-33 | 121 |
| MsG0480021788.01.T01 | MTR_4g036775 | 52.632 | 57 | 27 | 0 | 2 | 58 | 29 | 85 | 1.10e-13 | 69.3 |
| MsG0480021788.01.T01 | MTR_4g134280 | 34.199 | 231 | 133 | 9 | 81 | 296 | 2 | 228 | 5.77e-33 | 125 |
| MsG0480021788.01.T01 | MTR_5g081720 | 28.866 | 291 | 187 | 11 | 21 | 296 | 63 | 348 | 3.13e-32 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021788.01.T01 | AT4G16260 | 49.837 | 307 | 145 | 5 | 1 | 300 | 1 | 305 | 1.05e-102 | 303 |
| MsG0480021788.01.T01 | AT4G16260 | 49.675 | 308 | 146 | 5 | 1 | 301 | 30 | 335 | 2.28e-102 | 303 |
| MsG0480021788.01.T01 | AT3G57260 | 52.769 | 307 | 134 | 7 | 1 | 301 | 38 | 339 | 1.23e-101 | 301 |
| MsG0480021788.01.T01 | AT3G57260 | 52.769 | 307 | 134 | 7 | 1 | 301 | 54 | 355 | 1.73e-101 | 301 |
| MsG0480021788.01.T01 | AT3G57270 | 49.180 | 305 | 148 | 4 | 3 | 300 | 35 | 339 | 1.97e-97 | 291 |
| MsG0480021788.01.T01 | AT3G57240 | 49.837 | 307 | 138 | 7 | 3 | 301 | 43 | 341 | 5.31e-96 | 287 |
| MsG0480021788.01.T01 | AT5G56590 | 37.380 | 313 | 181 | 6 | 3 | 300 | 34 | 346 | 5.99e-71 | 228 |
| MsG0480021788.01.T01 | AT5G20340 | 40.532 | 301 | 165 | 9 | 1 | 291 | 49 | 345 | 6.94e-71 | 223 |
| MsG0480021788.01.T01 | AT4G26830 | 40.064 | 312 | 174 | 7 | 2 | 300 | 36 | 347 | 9.58e-71 | 226 |
| MsG0480021788.01.T01 | AT4G26830 | 40.064 | 312 | 174 | 7 | 2 | 300 | 32 | 343 | 1.20e-70 | 226 |
| MsG0480021788.01.T01 | AT1G77790 | 39.344 | 305 | 171 | 8 | 3 | 296 | 38 | 339 | 1.32e-69 | 219 |
| MsG0480021788.01.T01 | AT2G05790 | 38.658 | 313 | 178 | 7 | 2 | 300 | 32 | 344 | 2.28e-69 | 223 |
| MsG0480021788.01.T01 | AT5G20390 | 40.333 | 300 | 165 | 9 | 1 | 290 | 39 | 334 | 7.23e-69 | 218 |
| MsG0480021788.01.T01 | AT5G55180 | 38.217 | 314 | 180 | 8 | 2 | 301 | 34 | 347 | 1.24e-67 | 218 |
| MsG0480021788.01.T01 | AT5G55180 | 38.217 | 314 | 180 | 8 | 2 | 301 | 34 | 347 | 1.72e-67 | 218 |
| MsG0480021788.01.T01 | AT4G18340 | 38.339 | 313 | 180 | 6 | 2 | 301 | 41 | 353 | 2.31e-67 | 215 |
| MsG0480021788.01.T01 | AT5G20330 | 39.667 | 300 | 167 | 9 | 1 | 290 | 40 | 335 | 3.28e-67 | 213 |
| MsG0480021788.01.T01 | AT4G18340 | 38.339 | 313 | 180 | 6 | 2 | 301 | 41 | 353 | 3.32e-67 | 215 |
| MsG0480021788.01.T01 | AT2G16230 | 39.355 | 310 | 174 | 7 | 1 | 296 | 31 | 340 | 4.32e-67 | 218 |
| MsG0480021788.01.T01 | AT2G01630 | 38.636 | 308 | 173 | 7 | 5 | 296 | 33 | 340 | 5.86e-66 | 212 |
| MsG0480021788.01.T01 | AT5G42100 | 40.514 | 311 | 169 | 7 | 2 | 296 | 34 | 344 | 6.98e-66 | 213 |
| MsG0480021788.01.T01 | AT5G42100 | 40.514 | 311 | 169 | 7 | 2 | 296 | 34 | 344 | 7.27e-66 | 213 |
| MsG0480021788.01.T01 | AT2G01630 | 38.636 | 308 | 173 | 7 | 5 | 296 | 33 | 340 | 2.30e-65 | 211 |
| MsG0480021788.01.T01 | AT1G33220 | 39.860 | 286 | 159 | 8 | 1 | 276 | 40 | 322 | 5.36e-65 | 207 |
| MsG0480021788.01.T01 | AT1G32860 | 36.624 | 314 | 184 | 7 | 2 | 300 | 36 | 349 | 5.64e-65 | 210 |
| MsG0480021788.01.T01 | AT5G42720 | 38.264 | 311 | 177 | 8 | 1 | 296 | 32 | 342 | 7.68e-65 | 210 |
| MsG0480021788.01.T01 | AT2G01630 | 39.333 | 300 | 166 | 7 | 5 | 288 | 33 | 332 | 1.02e-64 | 211 |
| MsG0480021788.01.T01 | AT2G26600 | 34.395 | 314 | 192 | 8 | 2 | 301 | 41 | 354 | 3.84e-64 | 207 |
| MsG0480021788.01.T01 | AT1G30080 | 37.662 | 308 | 179 | 7 | 2 | 296 | 43 | 350 | 4.90e-64 | 206 |
| MsG0480021788.01.T01 | AT1G30080 | 37.662 | 308 | 179 | 7 | 2 | 296 | 43 | 350 | 9.58e-64 | 206 |
| MsG0480021788.01.T01 | AT2G27500 | 35.599 | 309 | 185 | 8 | 2 | 296 | 36 | 344 | 3.18e-63 | 204 |
| MsG0480021788.01.T01 | AT2G27500 | 35.599 | 309 | 185 | 8 | 2 | 296 | 36 | 344 | 5.84e-63 | 204 |
| MsG0480021788.01.T01 | AT4G34480 | 39.482 | 309 | 173 | 7 | 2 | 296 | 33 | 341 | 6.80e-63 | 202 |
| MsG0480021788.01.T01 | AT4G34480 | 39.482 | 309 | 173 | 7 | 2 | 296 | 33 | 341 | 3.80e-61 | 202 |
| MsG0480021788.01.T01 | AT3G15800 | 35.806 | 310 | 184 | 7 | 2 | 296 | 50 | 359 | 4.22e-61 | 199 |
| MsG0480021788.01.T01 | AT3G61810 | 34.076 | 314 | 188 | 6 | 3 | 301 | 63 | 372 | 6.05e-60 | 196 |
| MsG0480021788.01.T01 | AT5G24318 | 35.577 | 312 | 178 | 8 | 2 | 296 | 37 | 342 | 6.57e-60 | 196 |
| MsG0480021788.01.T01 | AT1G77780 | 35.644 | 303 | 182 | 9 | 3 | 296 | 32 | 330 | 4.25e-59 | 193 |
| MsG0480021788.01.T01 | AT5G24318 | 35.577 | 312 | 178 | 8 | 2 | 296 | 37 | 342 | 6.07e-59 | 195 |
| MsG0480021788.01.T01 | AT5G24318 | 35.577 | 312 | 178 | 8 | 2 | 296 | 37 | 342 | 1.18e-58 | 194 |
| MsG0480021788.01.T01 | AT1G66250 | 36.364 | 308 | 179 | 7 | 5 | 296 | 42 | 348 | 5.76e-58 | 194 |
| MsG0480021788.01.T01 | AT3G07320 | 33.227 | 313 | 190 | 8 | 2 | 296 | 32 | 343 | 4.84e-55 | 185 |
| MsG0480021788.01.T01 | AT5G20560 | 35.333 | 300 | 181 | 8 | 1 | 290 | 40 | 336 | 1.07e-54 | 181 |
| MsG0480021788.01.T01 | AT2G27500 | 37.549 | 253 | 145 | 7 | 57 | 296 | 14 | 266 | 1.10e-54 | 180 |
| MsG0480021788.01.T01 | AT2G26600 | 35.271 | 258 | 154 | 7 | 57 | 301 | 3 | 260 | 2.46e-54 | 179 |
| MsG0480021788.01.T01 | AT4G29360 | 34.727 | 311 | 190 | 6 | 3 | 300 | 35 | 345 | 2.44e-53 | 182 |
| MsG0480021788.01.T01 | AT4G29360 | 34.727 | 311 | 190 | 6 | 3 | 300 | 45 | 355 | 3.51e-53 | 182 |
| MsG0480021788.01.T01 | AT4G14080 | 33.228 | 316 | 191 | 9 | 3 | 300 | 50 | 363 | 1.05e-52 | 179 |
| MsG0480021788.01.T01 | AT1G11820 | 32.226 | 301 | 188 | 6 | 4 | 288 | 53 | 353 | 1.67e-52 | 177 |
| MsG0480021788.01.T01 | AT1G11820 | 32.226 | 301 | 188 | 6 | 4 | 288 | 53 | 353 | 1.87e-51 | 176 |
| MsG0480021788.01.T01 | AT3G13560 | 32.143 | 308 | 193 | 6 | 5 | 296 | 36 | 343 | 3.67e-51 | 176 |
| MsG0480021788.01.T01 | AT3G13560 | 32.143 | 308 | 193 | 6 | 5 | 296 | 36 | 343 | 3.67e-51 | 176 |
| MsG0480021788.01.T01 | AT3G13560 | 32.143 | 308 | 193 | 6 | 5 | 296 | 36 | 343 | 3.67e-51 | 176 |
| MsG0480021788.01.T01 | AT3G13560 | 32.143 | 308 | 193 | 6 | 5 | 296 | 36 | 343 | 3.67e-51 | 176 |
| MsG0480021788.01.T01 | AT3G13560 | 32.143 | 308 | 193 | 6 | 5 | 296 | 36 | 343 | 3.67e-51 | 176 |
| MsG0480021788.01.T01 | AT1G11820 | 32.226 | 301 | 188 | 6 | 4 | 288 | 53 | 353 | 4.26e-51 | 176 |
| MsG0480021788.01.T01 | AT3G23770 | 33.229 | 319 | 194 | 8 | 2 | 301 | 44 | 362 | 4.98e-51 | 175 |
| MsG0480021788.01.T01 | AT5G58480 | 33.987 | 306 | 186 | 9 | 11 | 301 | 42 | 346 | 3.03e-50 | 173 |
| MsG0480021788.01.T01 | AT5G58090 | 35.333 | 300 | 178 | 9 | 12 | 296 | 39 | 337 | 3.50e-50 | 173 |
| MsG0480021788.01.T01 | AT2G19440 | 34.936 | 312 | 184 | 10 | 1 | 296 | 28 | 336 | 4.64e-50 | 172 |
| MsG0480021788.01.T01 | AT2G19440 | 34.936 | 312 | 184 | 10 | 1 | 296 | 28 | 336 | 4.64e-50 | 172 |
| MsG0480021788.01.T01 | AT5G18220 | 33.119 | 311 | 189 | 9 | 1 | 296 | 37 | 343 | 1.69e-49 | 171 |
| MsG0480021788.01.T01 | AT1G64760 | 33.013 | 312 | 190 | 9 | 1 | 296 | 32 | 340 | 2.00e-47 | 166 |
| MsG0480021788.01.T01 | AT1G64760 | 33.013 | 312 | 190 | 9 | 1 | 296 | 32 | 340 | 2.00e-47 | 166 |
| MsG0480021788.01.T01 | AT4G31140 | 33.882 | 304 | 185 | 9 | 12 | 300 | 44 | 346 | 3.91e-46 | 162 |
| MsG0480021788.01.T01 | AT3G04010 | 31.646 | 316 | 197 | 9 | 1 | 300 | 40 | 352 | 4.85e-45 | 159 |
| MsG0480021788.01.T01 | AT3G46570 | 33.546 | 313 | 184 | 11 | 2 | 296 | 34 | 340 | 6.47e-45 | 156 |
| MsG0480021788.01.T01 | AT2G39640 | 33.333 | 303 | 186 | 9 | 5 | 296 | 39 | 336 | 1.16e-44 | 159 |
| MsG0480021788.01.T01 | AT3G24330 | 32.177 | 317 | 190 | 12 | 1 | 297 | 46 | 357 | 5.69e-44 | 157 |
| MsG0480021788.01.T01 | AT3G55430 | 33.007 | 306 | 187 | 11 | 5 | 296 | 38 | 339 | 7.00e-44 | 155 |
| MsG0480021788.01.T01 | AT4G34480 | 41.667 | 228 | 120 | 6 | 82 | 296 | 3 | 230 | 1.09e-43 | 154 |
| MsG0480021788.01.T01 | AT4G17180 | 31.894 | 301 | 184 | 9 | 12 | 297 | 42 | 336 | 4.17e-43 | 154 |
| MsG0480021788.01.T01 | AT5G64790 | 31.475 | 305 | 191 | 9 | 12 | 300 | 45 | 347 | 6.90e-42 | 151 |
| MsG0480021788.01.T01 | AT5G24318 | 38.756 | 209 | 108 | 6 | 102 | 296 | 1 | 203 | 2.34e-41 | 145 |
| MsG0480021788.01.T01 | AT5G20870 | 31.429 | 315 | 185 | 12 | 12 | 300 | 47 | 356 | 3.71e-40 | 146 |
| MsG0480021788.01.T01 | AT3G55780 | 28.477 | 302 | 193 | 11 | 18 | 301 | 58 | 354 | 4.03e-35 | 130 |
Find 69 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTATGTTGGAACCTTTA+AGG | 0.089668 | 4:-64273173 | None:intergenic |
| CAAGCCCTTCAAGCCCTTAA+AGG | 0.219614 | 4:+64273159 | MsG0480021788.01.T01:CDS |
| GCTTGAAGGGCTTGTTCGTC+TGG | 0.228164 | 4:-64273150 | None:intergenic |
| CAGCGTATACTGAGTCTAAT+TGG | 0.233502 | 4:-64273671 | None:intergenic |
| GAAGCAACTGAACAACATTT+TGG | 0.249494 | 4:+64273900 | MsG0480021788.01.T01:CDS |
| TTCTTTAGGAAGTCTATTAT+TGG | 0.255166 | 4:-64273513 | None:intergenic |
| ATGCCAATCAAGCTACAAAT+TGG | 0.258407 | 4:+64273238 | MsG0480021788.01.T01:CDS |
| TCCACAACTTCTTGCCTTGA+TGG | 0.270614 | 4:-64273084 | None:intergenic |
| ATTGGGCATCAAAGAGGTTT+TGG | 0.289119 | 4:-64273653 | None:intergenic |
| GTGGCGCTCCATTGTTCTTT+AGG | 0.292675 | 4:-64273527 | None:intergenic |
| TTCTATGTTGGAACCTTTAA+GGG | 0.304709 | 4:-64273172 | None:intergenic |
| TCAATAGCTCCGGGTCTATT+AGG | 0.313953 | 4:-64273834 | None:intergenic |
| CATAGGGTGTCACATACTTT+TGG | 0.328516 | 4:-64273263 | None:intergenic |
| GACCCAATTTGTAGCTTGAT+TGG | 0.339546 | 4:-64273241 | None:intergenic |
| GCATGGCAGTGGCAATGTAC+TGG | 0.346712 | 4:-64273350 | None:intergenic |
| TACTGGGCTTCATTGTCATT+AGG | 0.366506 | 4:-64273333 | None:intergenic |
| ACGCTGCTCTTGAGAAAGTT+GGG | 0.379600 | 4:+64273688 | MsG0480021788.01.T01:CDS |
| CTTGAAGGGCTTGTTCGTCT+GGG | 0.403107 | 4:-64273149 | None:intergenic |
| GTGGATGGCCATCGGAAGGC+GGG | 0.410865 | 4:+64273742 | MsG0480021788.01.T01:CDS |
| TTGATCAATCACGTCAAGAA+TGG | 0.432895 | 4:+64273807 | MsG0480021788.01.T01:CDS |
| CAACAAGGAAACAATGAAGT+TGG | 0.438007 | 4:+64273627 | MsG0480021788.01.T01:CDS |
| TACGCTGCTCTTGAGAAAGT+TGG | 0.441895 | 4:+64273687 | MsG0480021788.01.T01:CDS |
| TGGAACCTTTAAGGGCTTGA+AGG | 0.446944 | 4:-64273164 | None:intergenic |
| TGATATTTAGATGATTTGTC+AGG | 0.458349 | 4:-64273933 | None:intergenic |
| CAAGTAAGTCTCAATAGCTC+CGG | 0.459135 | 4:-64273844 | None:intergenic |
| AATTCATATCCACCTAATGA+TGG | 0.459747 | 4:+64273456 | MsG0480021788.01.T01:CDS |
| CATGGCAGTGGCAATGTACT+GGG | 0.461472 | 4:-64273349 | None:intergenic |
| GTGGATTTATATAAGTCAAA+TGG | 0.466757 | 4:+64273102 | MsG0480021788.01.T01:CDS |
| GAGAGAAGAAAGGGTTTCCT+TGG | 0.473937 | 4:-64273211 | None:intergenic |
| TTCCGATGGCCATCCACTCT+CGG | 0.475708 | 4:-64273736 | None:intergenic |
| ATTTCATCTGCAAATTTACA+AGG | 0.482621 | 4:+64273390 | MsG0480021788.01.T01:CDS |
| AGCGTATACTGAGTCTAATT+GGG | 0.488716 | 4:-64273670 | None:intergenic |
| TCAGTGAAAACACCATCATT+AGG | 0.495646 | 4:-64273468 | None:intergenic |
| TGATCAATCACGTCAAGAAT+GGG | 0.496832 | 4:+64273808 | MsG0480021788.01.T01:CDS |
| TGCCAATCAAGCTACAAATT+GGG | 0.500599 | 4:+64273239 | MsG0480021788.01.T01:CDS |
| AACAAGGAAACAATGAAGTT+GGG | 0.501730 | 4:+64273628 | MsG0480021788.01.T01:CDS |
| GGAGTTTGCTATGGAATGCT+TGG | 0.503294 | 4:+64273051 | None:intergenic |
| AAAATCAAGTACATCAGTGT+TGG | 0.515246 | 4:+64273297 | MsG0480021788.01.T01:CDS |
| GGCATCTGTGAGAGAAGAAA+GGG | 0.523286 | 4:-64273220 | None:intergenic |
| ACCATCAAGGCAAGAAGTTG+TGG | 0.524431 | 4:+64273083 | MsG0480021788.01.T01:CDS |
| GGAACCTTTAAGGGCTTGAA+GGG | 0.527762 | 4:-64273163 | None:intergenic |
| GCACTATCCCCGCCTTCCGA+TGG | 0.531293 | 4:-64273750 | None:intergenic |
| TTATCTTTATAAGCGATGTA+CGG | 0.538117 | 4:-64273567 | None:intergenic |
| CGCTGCTCTTGAGAAAGTTG+GGG | 0.541508 | 4:+64273689 | MsG0480021788.01.T01:CDS |
| TGGCATCTGTGAGAGAAGAA+AGG | 0.541551 | 4:-64273221 | None:intergenic |
| TTGAAGGGCTTGTTCGTCTG+GGG | 0.546385 | 4:-64273148 | None:intergenic |
| ATCAAGGATCAATTCTATGT+TGG | 0.547280 | 4:-64273184 | None:intergenic |
| AAGTAAGTCTCAATAGCTCC+GGG | 0.554259 | 4:-64273843 | None:intergenic |
| ATTGATCCTTGATGTGGCCA+AGG | 0.559139 | 4:+64273194 | MsG0480021788.01.T01:CDS |
| AGTGGATGGCCATCGGAAGG+CGG | 0.559906 | 4:+64273741 | MsG0480021788.01.T01:CDS |
| GGGTTTCCTTGGCCACATCA+AGG | 0.566068 | 4:-64273200 | None:intergenic |
| AAATTTACAAGGACAAATCA+AGG | 0.572487 | 4:+64273401 | MsG0480021788.01.T01:CDS |
| GTCCGAGAGTGGATGGCCAT+CGG | 0.573233 | 4:+64273734 | MsG0480021788.01.T01:CDS |
| TTTGATGAAAATCAGAAGAA+TGG | 0.575433 | 4:+64273876 | MsG0480021788.01.T01:CDS |
| TAGTTGTGTCCGAGAGTGGA+TGG | 0.576028 | 4:+64273727 | MsG0480021788.01.T01:CDS |
| AGTCTAATTGGGCATCAAAG+AGG | 0.581605 | 4:-64273659 | None:intergenic |
| AAGATAGTTGTGTCCGAGAG+TGG | 0.586296 | 4:+64273723 | MsG0480021788.01.T01:CDS |
| TGGATGGCCATCGGAAGGCG+GGG | 0.589764 | 4:+64273743 | MsG0480021788.01.T01:CDS |
| ATAGACTTCCTAAAGAACAA+TGG | 0.595560 | 4:+64273519 | MsG0480021788.01.T01:CDS |
| GAGAGTGGATGGCCATCGGA+AGG | 0.597361 | 4:+64273738 | MsG0480021788.01.T01:CDS |
| GGATACACATTGGCAAGAAG+TGG | 0.604193 | 4:-64273546 | None:intergenic |
| TTGGCAATAATCTACCATCA+AGG | 0.619775 | 4:+64273070 | MsG0480021788.01.T01:CDS |
| CATAGAATTGATCCTTGATG+TGG | 0.622652 | 4:+64273188 | MsG0480021788.01.T01:CDS |
| TGTGGAAGCATTATCAGTTG+AGG | 0.636860 | 4:-64273772 | None:intergenic |
| AATGGGACTCCTAATAGACC+CGG | 0.649769 | 4:+64273825 | MsG0480021788.01.T01:CDS |
| GTGAAAACACCATCATTAGG+TGG | 0.653737 | 4:-64273465 | None:intergenic |
| AGCGATGTACGGATACACAT+TGG | 0.667248 | 4:-64273556 | None:intergenic |
| GCTGCTCTTGAGAAAGTTGG+GGG | 0.679213 | 4:+64273690 | MsG0480021788.01.T01:CDS |
| GGACACAACTATCTTCACAT+CGG | 0.708430 | 4:-64273715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATCAAATTTTGATAATATG+TGG | - | Chr4:64273793-64273812 | None:intergenic | 20.0% |
| ! | AAATTTACAAGGACAAATCA+AGG | + | Chr4:64273401-64273420 | MsG0480021788.01.T01:CDS | 25.0% |
| ! | ATTTCATCTGCAAATTTACA+AGG | + | Chr4:64273390-64273409 | MsG0480021788.01.T01:CDS | 25.0% |
| ! | GTGGATTTATATAAGTCAAA+TGG | + | Chr4:64273102-64273121 | MsG0480021788.01.T01:CDS | 25.0% |
| ! | TTATCTTTATAAGCGATGTA+CGG | - | Chr4:64273570-64273589 | None:intergenic | 25.0% |
| ! | TTTGATGAAAATCAGAAGAA+TGG | + | Chr4:64273876-64273895 | MsG0480021788.01.T01:CDS | 25.0% |
| !! | ATTTTTACATCTTGAGCATA+GGG | - | Chr4:64273282-64273301 | None:intergenic | 25.0% |
| !! | TATGCTCTTTTTAAACAACA+AGG | + | Chr4:64273612-64273631 | MsG0480021788.01.T01:CDS | 25.0% |
| !! | TGATATTTAGATGATTTGTC+AGG | - | Chr4:64273936-64273955 | None:intergenic | 25.0% |
| !! | TTCTTTAGGAAGTCTATTAT+TGG | - | Chr4:64273516-64273535 | None:intergenic | 25.0% |
| !!! | GTTGTAAATATTGTTTTGCT+TGG | - | Chr4:64273494-64273513 | None:intergenic | 25.0% |
| AAAATCAAGTACATCAGTGT+TGG | + | Chr4:64273297-64273316 | MsG0480021788.01.T01:CDS | 30.0% | |
| AACAAGGAAACAATGAAGTT+GGG | + | Chr4:64273628-64273647 | MsG0480021788.01.T01:CDS | 30.0% | |
| AATTCATATCCACCTAATGA+TGG | + | Chr4:64273456-64273475 | MsG0480021788.01.T01:CDS | 30.0% | |
| ATAGACTTCCTAAAGAACAA+TGG | + | Chr4:64273519-64273538 | MsG0480021788.01.T01:CDS | 30.0% | |
| ATCAAGGATCAATTCTATGT+TGG | - | Chr4:64273187-64273206 | None:intergenic | 30.0% | |
| ATTCTATGTTGGAACCTTTA+AGG | - | Chr4:64273176-64273195 | None:intergenic | 30.0% | |
| TTCTATGTTGGAACCTTTAA+GGG | - | Chr4:64273175-64273194 | None:intergenic | 30.0% | |
| ! | CTTCTGATTTTCATCAAACA+TGG | - | Chr4:64273874-64273893 | None:intergenic | 30.0% |
| ! | GATTTTTACATCTTGAGCAT+AGG | - | Chr4:64273283-64273302 | None:intergenic | 30.0% |
| ! | TGCATTTTGAATGTTTTGCA+TGG | - | Chr4:64273370-64273389 | None:intergenic | 30.0% |
| AGCGTATACTGAGTCTAATT+GGG | - | Chr4:64273673-64273692 | None:intergenic | 35.0% | |
| ATGCCAATCAAGCTACAAAT+TGG | + | Chr4:64273238-64273257 | MsG0480021788.01.T01:CDS | 35.0% | |
| CAACAAGGAAACAATGAAGT+TGG | + | Chr4:64273627-64273646 | MsG0480021788.01.T01:CDS | 35.0% | |
| CATAGAATTGATCCTTGATG+TGG | + | Chr4:64273188-64273207 | MsG0480021788.01.T01:CDS | 35.0% | |
| TCAGTGAAAACACCATCATT+AGG | - | Chr4:64273471-64273490 | None:intergenic | 35.0% | |
| TGATCAATCACGTCAAGAAT+GGG | + | Chr4:64273808-64273827 | MsG0480021788.01.T01:CDS | 35.0% | |
| TGCCAATCAAGCTACAAATT+GGG | + | Chr4:64273239-64273258 | MsG0480021788.01.T01:CDS | 35.0% | |
| TTGATCAATCACGTCAAGAA+TGG | + | Chr4:64273807-64273826 | MsG0480021788.01.T01:CDS | 35.0% | |
| TTGGCAATAATCTACCATCA+AGG | + | Chr4:64273070-64273089 | MsG0480021788.01.T01:CDS | 35.0% | |
| ! | GAAGCAACTGAACAACATTT+TGG | + | Chr4:64273900-64273919 | MsG0480021788.01.T01:CDS | 35.0% |
| AAGTAAGTCTCAATAGCTCC+GGG | - | Chr4:64273846-64273865 | None:intergenic | 40.0% | |
| AGTCTAATTGGGCATCAAAG+AGG | - | Chr4:64273662-64273681 | None:intergenic | 40.0% | |
| CAAGTAAGTCTCAATAGCTC+CGG | - | Chr4:64273847-64273866 | None:intergenic | 40.0% | |
| CAGCGTATACTGAGTCTAAT+TGG | - | Chr4:64273674-64273693 | None:intergenic | 40.0% | |
| GACCCAATTTGTAGCTTGAT+TGG | - | Chr4:64273244-64273263 | None:intergenic | 40.0% | |
| GGACACAACTATCTTCACAT+CGG | - | Chr4:64273718-64273737 | None:intergenic | 40.0% | |
| GTGAAAACACCATCATTAGG+TGG | - | Chr4:64273468-64273487 | None:intergenic | 40.0% | |
| TACTGGGCTTCATTGTCATT+AGG | - | Chr4:64273336-64273355 | None:intergenic | 40.0% | |
| ! | ATTGGGCATCAAAGAGGTTT+TGG | - | Chr4:64273656-64273675 | None:intergenic | 40.0% |
| ! | TTGAATGTTTTGCATGGCAG+TGG | - | Chr4:64273364-64273383 | None:intergenic | 40.0% |
| !! | CATAGGGTGTCACATACTTT+TGG | - | Chr4:64273266-64273285 | None:intergenic | 40.0% |
| !! | TGTGGAAGCATTATCAGTTG+AGG | - | Chr4:64273775-64273794 | None:intergenic | 40.0% |
| AAGATAGTTGTGTCCGAGAG+TGG | + | Chr4:64273723-64273742 | MsG0480021788.01.T01:CDS | 45.0% | |
| AATGGGACTCCTAATAGACC+CGG | + | Chr4:64273825-64273844 | MsG0480021788.01.T01:CDS | 45.0% | |
| ACCATCAAGGCAAGAAGTTG+TGG | + | Chr4:64273083-64273102 | MsG0480021788.01.T01:CDS | 45.0% | |
| ACGCTGCTCTTGAGAAAGTT+GGG | + | Chr4:64273688-64273707 | MsG0480021788.01.T01:CDS | 45.0% | |
| AGCGATGTACGGATACACAT+TGG | - | Chr4:64273559-64273578 | None:intergenic | 45.0% | |
| ATTGATCCTTGATGTGGCCA+AGG | + | Chr4:64273194-64273213 | MsG0480021788.01.T01:CDS | 45.0% | |
| GAGAGAAGAAAGGGTTTCCT+TGG | - | Chr4:64273214-64273233 | None:intergenic | 45.0% | |
| GGATACACATTGGCAAGAAG+TGG | - | Chr4:64273549-64273568 | None:intergenic | 45.0% | |
| GGCATCTGTGAGAGAAGAAA+GGG | - | Chr4:64273223-64273242 | None:intergenic | 45.0% | |
| TACGCTGCTCTTGAGAAAGT+TGG | + | Chr4:64273687-64273706 | MsG0480021788.01.T01:CDS | 45.0% | |
| TCAATAGCTCCGGGTCTATT+AGG | - | Chr4:64273837-64273856 | None:intergenic | 45.0% | |
| TCCACAACTTCTTGCCTTGA+TGG | - | Chr4:64273087-64273106 | None:intergenic | 45.0% | |
| TGGCATCTGTGAGAGAAGAA+AGG | - | Chr4:64273224-64273243 | None:intergenic | 45.0% | |
| ! | GGAACCTTTAAGGGCTTGAA+GGG | - | Chr4:64273166-64273185 | None:intergenic | 45.0% |
| ! | TGGAACCTTTAAGGGCTTGA+AGG | - | Chr4:64273167-64273186 | None:intergenic | 45.0% |
| CAAGCCCTTCAAGCCCTTAA+AGG | + | Chr4:64273159-64273178 | MsG0480021788.01.T01:CDS | 50.0% | |
| CATGGCAGTGGCAATGTACT+GGG | - | Chr4:64273352-64273371 | None:intergenic | 50.0% | |
| CGCTGCTCTTGAGAAAGTTG+GGG | + | Chr4:64273689-64273708 | MsG0480021788.01.T01:CDS | 50.0% | |
| GCTGCTCTTGAGAAAGTTGG+GGG | + | Chr4:64273690-64273709 | MsG0480021788.01.T01:CDS | 50.0% | |
| GTGGCGCTCCATTGTTCTTT+AGG | - | Chr4:64273530-64273549 | None:intergenic | 50.0% | |
| TAGTTGTGTCCGAGAGTGGA+TGG | + | Chr4:64273727-64273746 | MsG0480021788.01.T01:CDS | 50.0% | |
| ! | CTTGAAGGGCTTGTTCGTCT+GGG | - | Chr4:64273152-64273171 | None:intergenic | 50.0% |
| ! | TTGAAGGGCTTGTTCGTCTG+GGG | - | Chr4:64273151-64273170 | None:intergenic | 50.0% |
| GCATGGCAGTGGCAATGTAC+TGG | - | Chr4:64273353-64273372 | None:intergenic | 55.0% | |
| GGGTTTCCTTGGCCACATCA+AGG | - | Chr4:64273203-64273222 | None:intergenic | 55.0% | |
| TTCCGATGGCCATCCACTCT+CGG | - | Chr4:64273739-64273758 | None:intergenic | 55.0% | |
| ! | GCTTGAAGGGCTTGTTCGTC+TGG | - | Chr4:64273153-64273172 | None:intergenic | 55.0% |
| AGTGGATGGCCATCGGAAGG+CGG | + | Chr4:64273741-64273760 | MsG0480021788.01.T01:CDS | 60.0% | |
| GAGAGTGGATGGCCATCGGA+AGG | + | Chr4:64273738-64273757 | MsG0480021788.01.T01:CDS | 60.0% | |
| GTCCGAGAGTGGATGGCCAT+CGG | + | Chr4:64273734-64273753 | MsG0480021788.01.T01:CDS | 60.0% | |
| GCACTATCCCCGCCTTCCGA+TGG | - | Chr4:64273753-64273772 | None:intergenic | 65.0% | |
| GTGGATGGCCATCGGAAGGC+GGG | + | Chr4:64273742-64273761 | MsG0480021788.01.T01:CDS | 65.0% | |
| TGGATGGCCATCGGAAGGCG+GGG | + | Chr4:64273743-64273762 | MsG0480021788.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 64273066 | 64273971 | 64273066 | ID=MsG0480021788.01;Name=MsG0480021788.01 |
| Chr4 | mRNA | 64273066 | 64273971 | 64273066 | ID=MsG0480021788.01.T01;Parent=MsG0480021788.01;Name=MsG0480021788.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|301 |
| Chr4 | exon | 64273066 | 64273971 | 64273066 | ID=MsG0480021788.01.T01:exon:7756;Parent=MsG0480021788.01.T01 |
| Chr4 | CDS | 64273066 | 64273971 | 64273066 | ID=MsG0480021788.01.T01:cds;Parent=MsG0480021788.01.T01 |
| Gene Sequence |
| Protein sequence |
