Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021789.01.T01 | XP_003607319.1 | 97.342 | 301 | 8 | 0 | 1 | 301 | 29 | 329 | 0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021789.01.T01 | P23547 | 57.895 | 304 | 123 | 3 | 3 | 301 | 40 | 343 | 5.41E-122 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021789.01.T01 | G7JQL4 | 97.342 | 301 | 8 | 0 | 1 | 301 | 29 | 329 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0480021789.01 | 0.819154 | 1.348024e-52 | 1.029135e-49 |
| MsG0080048909.01 | MsG0480021789.01 | 0.804052 | 2.599571e-49 | 1.327150e-46 |
| MsG0080048969.01 | MsG0480021789.01 | 0.838857 | 2.241366e-57 | 3.040692e-54 |
| MsG0180000017.01 | MsG0480021789.01 | 0.846386 | 2.243554e-59 | 3.855300e-56 |
| MsG0180000040.01 | MsG0480021789.01 | 0.825031 | 5.850928e-54 | 5.272011e-51 |
| MsG0180000490.01 | MsG0480021789.01 | 0.822915 | 1.834862e-53 | 1.556785e-50 |
| MsG0180000491.01 | MsG0480021789.01 | 0.816620 | 5.035627e-52 | 3.585963e-49 |
| MsG0180000655.01 | MsG0480021789.01 | 0.843757 | 1.151145e-58 | 1.819208e-55 |
| MsG0180000976.01 | MsG0480021789.01 | 0.837722 | 4.395560e-57 | 5.760496e-54 |
| MsG0180001367.01 | MsG0480021789.01 | 0.805242 | 1.467624e-49 | 7.725282e-47 |
| MsG0180001827.01 | MsG0480021789.01 | 0.829202 | 5.874918e-55 | 5.971974e-52 |
| MsG0180001907.01 | MsG0480021789.01 | 0.807629 | 4.604384e-50 | 2.577310e-47 |
| MsG0180002891.01 | MsG0480021789.01 | 0.811132 | 8.157857e-51 | 5.009209e-48 |
| MsG0180003451.01 | MsG0480021789.01 | 0.800065 | 1.716673e-48 | 7.917956e-46 |
| MsG0180003503.01 | MsG0480021789.01 | 0.800620 | 1.323298e-48 | 6.190099e-46 |
| MsG0180005561.01 | MsG0480021789.01 | 0.802223 | 6.210927e-49 | 3.025787e-46 |
| MsG0180005991.01 | MsG0480021789.01 | 0.831292 | 1.813668e-55 | 1.959477e-52 |
| MsG0180006177.01 | MsG0480021789.01 | 0.801914 | 7.190645e-49 | 3.475651e-46 |
| MsG0180006239.01 | MsG0480021789.01 | 0.823847 | 1.110982e-53 | 9.677622e-51 |
| MsG0280010584.01 | MsG0480021789.01 | 0.812504 | 4.101422e-51 | 2.612324e-48 |
| MsG0280010998.01 | MsG0480021789.01 | 0.810083 | 1.374971e-50 | 8.211153e-48 |
| MsG0280011169.01 | MsG0480021789.01 | 0.827546 | 1.473982e-54 | 1.427396e-51 |
| MsG0280011207.01 | MsG0480021789.01 | 0.815080 | 1.110325e-51 | 7.580241e-49 |
| MsG0280011372.01 | MsG0480021789.01 | 0.815018 | 1.145798e-51 | 7.809559e-49 |
| MsG0380011662.01 | MsG0480021789.01 | 0.827870 | 1.231870e-54 | 1.204329e-51 |
| MsG0380012251.01 | MsG0480021789.01 | 0.832874 | 7.367587e-56 | 8.342614e-53 |
| MsG0380012583.01 | MsG0480021789.01 | 0.857352 | 1.730342e-62 | 4.258639e-59 |
| MsG0380013501.01 | MsG0480021789.01 | 0.801196 | 1.009092e-48 | 4.789768e-46 |
| MsG0380014144.01 | MsG0480021789.01 | 0.844500 | 7.277040e-59 | 1.177135e-55 |
| MsG0380014183.01 | MsG0480021789.01 | 0.800239 | 1.582345e-48 | 7.330549e-46 |
| MsG0380014510.01 | MsG0480021789.01 | 0.809811 | 1.572944e-50 | 9.327289e-48 |
| MsG0380014557.01 | MsG0480021789.01 | 0.800118 | 1.674402e-48 | 7.733300e-46 |
| MsG0380014558.01 | MsG0480021789.01 | 0.809479 | 1.854051e-50 | 1.089744e-47 |
| MsG0480019193.01 | MsG0480021789.01 | 0.800885 | 1.168563e-48 | 5.503405e-46 |
| MsG0480019195.01 | MsG0480021789.01 | 0.807776 | 4.284835e-50 | 2.407648e-47 |
| MsG0480019604.01 | MsG0480021789.01 | 0.809530 | 1.807629e-50 | 1.063939e-47 |
| MsG0480019693.01 | MsG0480021789.01 | 0.827241 | 1.744596e-54 | 1.674658e-51 |
| MsG0480019752.01 | MsG0480021789.01 | 0.807985 | 3.868137e-50 | 2.185445e-47 |
| MsG0480020229.01 | MsG0480021789.01 | 0.806198 | 9.243901e-50 | 4.986802e-47 |
| MsG0480020270.01 | MsG0480021789.01 | 0.811140 | 8.125610e-51 | 4.990436e-48 |
| MsG0480021109.01 | MsG0480021789.01 | 0.810698 | 1.012961e-50 | 6.148698e-48 |
| MsG0480021111.01 | MsG0480021789.01 | 0.823004 | 1.749283e-53 | 1.487908e-50 |
| MsG0480021788.01 | MsG0480021789.01 | 0.955282 | 4.337174e-113 | 1.298340e-107 |
| MsG0480021789.01 | MsG0480021892.01 | 0.806179 | 9.326530e-50 | 5.029119e-47 |
| MsG0480021789.01 | MsG0480021895.01 | 0.830397 | 3.004699e-55 | 3.161906e-52 |
| MsG0480021789.01 | MsG0480021999.01 | 0.823188 | 1.584393e-53 | 1.354629e-50 |
| MsG0480021789.01 | MsG0480022002.01 | 0.820559 | 6.435001e-53 | 5.108663e-50 |
| MsG0480021789.01 | MsG0480022411.01 | 0.851977 | 6.241480e-61 | 1.284901e-57 |
| MsG0480021789.01 | MsG0480022412.01 | 0.802894 | 4.517173e-49 | 2.238623e-46 |
| MsG0480021789.01 | MsG0480022458.01 | 0.827669 | 1.376883e-54 | 1.338158e-51 |
| MsG0480021789.01 | MsG0480022805.01 | 0.802875 | 4.558554e-49 | 2.258023e-46 |
| MsG0480021789.01 | MsG0480023104.01 | 0.806880 | 6.634061e-50 | 3.641936e-47 |
| MsG0480021789.01 | MsG0480023148.01 | 0.814045 | 1.881495e-51 | 1.249086e-48 |
| MsG0480021789.01 | MsG0480023605.01 | 0.826650 | 2.414704e-54 | 2.278251e-51 |
| MsG0480021789.01 | MsG0480023616.01 | 0.832377 | 9.790227e-56 | 1.092276e-52 |
| MsG0480021789.01 | MsG0480023821.01 | 0.802532 | 5.366509e-49 | 2.635004e-46 |
| MsG0480021789.01 | MsG0580024201.01 | 0.814012 | 1.913681e-51 | 1.269312e-48 |
| MsG0480021789.01 | MsG0580024360.01 | 0.818744 | 1.670524e-52 | 1.261042e-49 |
| MsG0480021789.01 | MsG0580024386.01 | 0.818513 | 1.884432e-52 | 1.413520e-49 |
| MsG0480021789.01 | MsG0580024442.01 | 0.802271 | 6.071287e-49 | 2.961441e-46 |
| MsG0480021789.01 | MsG0580024448.01 | 0.836808 | 7.533015e-57 | 9.599463e-54 |
| MsG0480021789.01 | MsG0580024450.01 | 0.836803 | 7.554146e-57 | 9.624912e-54 |
| MsG0480021789.01 | MsG0580024768.01 | 0.847890 | 8.686327e-60 | 1.566271e-56 |
| MsG0480021789.01 | MsG0580025259.01 | 0.814282 | 1.668015e-51 | 1.114515e-48 |
| MsG0480021789.01 | MsG0580025301.01 | 0.834533 | 2.837391e-56 | 3.377001e-53 |
| MsG0480021789.01 | MsG0580025373.01 | 0.808950 | 2.407262e-50 | 1.395003e-47 |
| MsG0480021789.01 | MsG0580025392.01 | 0.801976 | 6.981536e-49 | 3.379735e-46 |
| MsG0480021789.01 | MsG0580027348.01 | 0.842152 | 3.079027e-58 | 4.626404e-55 |
| MsG0480021789.01 | MsG0580028092.01 | 0.833454 | 5.284306e-56 | 6.088542e-53 |
| MsG0480021789.01 | MsG0580028093.01 | 0.825946 | 3.552500e-54 | 3.285439e-51 |
| MsG0480021789.01 | MsG0580028177.01 | 0.821661 | 3.585071e-53 | 2.934993e-50 |
| MsG0480021789.01 | MsG0580029394.01 | 0.836002 | 1.207413e-56 | 1.501753e-53 |
| MsG0480021789.01 | MsG0580029433.01 | 0.826571 | 2.521353e-54 | 2.373458e-51 |
| MsG0480021789.01 | MsG0580029480.01 | 0.807528 | 4.836427e-50 | 2.700149e-47 |
| MsG0480021789.01 | MsG0580029719.01 | 0.821078 | 4.888937e-53 | 3.938071e-50 |
| MsG0480021789.01 | MsG0680031204.01 | 0.814498 | 1.494178e-51 | 1.004268e-48 |
| MsG0480021789.01 | MsG0680031996.01 | 0.801669 | 8.073505e-49 | 3.878134e-46 |
| MsG0480021789.01 | MsG0680031997.01 | 0.851245 | 1.006381e-60 | 2.024379e-57 |
| MsG0480021789.01 | MsG0680032000.01 | 0.846516 | 2.068638e-59 | 3.569749e-56 |
| MsG0480021789.01 | MsG0680032002.01 | 0.821266 | 4.423719e-53 | 3.581529e-50 |
| MsG0480021789.01 | MsG0680032003.01 | 0.839031 | 2.020121e-57 | 2.755074e-54 |
| MsG0480021789.01 | MsG0680032191.01 | 0.811956 | 5.400163e-51 | 3.388985e-48 |
| MsG0480021789.01 | MsG0680032245.01 | 0.807339 | 5.303821e-50 | 2.946602e-47 |
| MsG0480021789.01 | MsG0680032246.01 | 0.807528 | 4.836864e-50 | 2.700382e-47 |
| MsG0480021789.01 | MsG0680032275.01 | 0.808413 | 3.135620e-50 | 1.791700e-47 |
| MsG0480021789.01 | MsG0680033952.01 | 0.814881 | 1.229337e-51 | 8.347499e-49 |
| MsG0480021789.01 | MsG0680035612.01 | 0.808961 | 2.394802e-50 | 1.388216e-47 |
| MsG0480021789.01 | MsG0680035619.01 | 0.812976 | 3.232502e-51 | 2.084594e-48 |
| MsG0480021789.01 | MsG0780036127.01 | 0.800346 | 1.505092e-48 | 6.991882e-46 |
| MsG0480021789.01 | MsG0780036218.01 | 0.810845 | 9.413609e-51 | 5.736590e-48 |
| MsG0480021789.01 | MsG0780036583.01 | 0.837639 | 4.616431e-57 | 6.034528e-54 |
| MsG0480021789.01 | MsG0780036584.01 | 0.838739 | 2.403869e-57 | 3.249475e-54 |
| MsG0480021789.01 | MsG0780036613.01 | 0.861132 | 1.271743e-63 | 3.560506e-60 |
| MsG0480021789.01 | MsG0780036846.01 | 0.849450 | 3.207986e-60 | 6.083712e-57 |
| MsG0480021789.01 | MsG0780037944.01 | 0.805408 | 1.354450e-49 | 7.160281e-47 |
| MsG0480021789.01 | MsG0780038115.01 | 0.803985 | 2.683828e-49 | 1.367848e-46 |
| MsG0480021789.01 | MsG0780039805.01 | 0.816260 | 6.061920e-52 | 4.274666e-49 |
| MsG0480021789.01 | MsG0780040154.01 | 0.805756 | 1.144629e-49 | 6.105808e-47 |
| MsG0480021789.01 | MsG0780040155.01 | 0.824970 | 6.047739e-54 | 5.439759e-51 |
| MsG0480021789.01 | MsG0780040319.01 | 0.816243 | 6.114031e-52 | 4.309365e-49 |
| MsG0480021789.01 | MsG0780040701.01 | 0.807715 | 4.414901e-50 | 2.476804e-47 |
| MsG0480021789.01 | MsG0780041778.01 | 0.802590 | 5.219231e-49 | 2.566575e-46 |
| MsG0480021789.01 | MsG0880041850.01 | 0.810816 | 9.551812e-51 | 5.816060e-48 |
| MsG0480021789.01 | MsG0880042006.01 | 0.815864 | 7.428493e-52 | 5.181603e-49 |
| MsG0480021789.01 | MsG0880042043.01 | 0.810734 | 9.949328e-51 | 6.044987e-48 |
| MsG0480021789.01 | MsG0880042922.01 | 0.853369 | 2.501721e-61 | 5.393075e-58 |
| MsG0480021789.01 | MsG0880043235.01 | 0.803767 | 2.979420e-49 | 1.509936e-46 |
| MsG0480021789.01 | MsG0880044626.01 | 0.832305 | 1.019837e-55 | 1.135231e-52 |
| MsG0480021789.01 | MsG0880044636.01 | 0.828026 | 1.130192e-54 | 1.110018e-51 |
| MsG0480021789.01 | MsG0880045031.01 | 0.808792 | 2.602803e-50 | 1.501978e-47 |
| MsG0480021789.01 | MsG0880045377.01 | 0.838830 | 2.278182e-57 | 3.087974e-54 |
| MsG0480021789.01 | MsG0880045378.01 | 0.858008 | 1.105758e-62 | 2.781847e-59 |
| MsG0480021789.01 | MsG0880045400.01 | 0.826101 | 3.262764e-54 | 3.030640e-51 |
| MsG0480021789.01 | MsG0880045401.01 | 0.814405 | 1.566752e-51 | 1.050390e-48 |
| MsG0480021789.01 | MsG0880045409.01 | 0.870110 | 1.868419e-66 | 7.182496e-63 |
| MsG0480021789.01 | MsG0880045411.01 | 0.811810 | 5.811004e-51 | 3.632562e-48 |
| MsG0480021789.01 | MsG0880045423.01 | 0.854702 | 1.032087e-61 | 2.325248e-58 |
| MsG0480021789.01 | MsG0880045927.01 | 0.815958 | 7.078070e-52 | 4.949996e-49 |
| MsG0480021789.01 | MsG0880045929.01 | 0.800437 | 1.442038e-48 | 6.714437e-46 |
| MsG0480021789.01 | MsG0880046160.01 | 0.802983 | 4.330931e-49 | 2.151040e-46 |
| MsG0480021789.01 | MsG0880046406.01 | 0.817022 | 4.090159e-52 | 2.945052e-49 |
| MsG0480021789.01 | MsG0880046968.01 | 0.811247 | 7.700412e-51 | 4.742650e-48 |
| MsG0480021789.01 | MsG0880046969.01 | 0.808330 | 3.265447e-50 | 1.861937e-47 |
| MsG0480021789.01 | MsG0880047660.01 | 0.800531 | 1.379816e-48 | 6.439838e-46 |
| MsG0380015077.01 | MsG0480021789.01 | 0.803550 | 3.304726e-49 | 1.665561e-46 |
| MsG0380015103.01 | MsG0480021789.01 | 0.802797 | 4.731074e-49 | 2.338894e-46 |
| MsG0380015501.01 | MsG0480021789.01 | 0.813155 | 2.953860e-51 | 1.914042e-48 |
| MsG0380015758.01 | MsG0480021789.01 | 0.810892 | 9.194613e-51 | 5.610271e-48 |
| MsG0380015795.01 | MsG0480021789.01 | 0.802157 | 6.408415e-49 | 3.116816e-46 |
| MsG0380016033.01 | MsG0480021789.01 | 0.806520 | 7.905832e-50 | 4.300036e-47 |
| MsG0380016042.01 | MsG0480021789.01 | 0.826136 | 3.201532e-54 | 2.976762e-51 |
| MsG0380016151.01 | MsG0480021789.01 | 0.837130 | 6.233369e-57 | 8.020471e-54 |
| MsG0380016746.01 | MsG0480021789.01 | 0.813869 | 2.056835e-51 | 1.359007e-48 |
| MsG0380017353.01 | MsG0480021789.01 | 0.846188 | 2.541062e-59 | 4.338057e-56 |
| MsG0480018329.01 | MsG0480021789.01 | 0.823123 | 1.641054e-53 | 1.400549e-50 |
| MsG0480018330.01 | MsG0480021789.01 | 0.800393 | 1.472005e-48 | 6.846316e-46 |
| MsG0280006706.01 | MsG0480021789.01 | 0.810874 | 9.279255e-51 | 5.659118e-48 |
| MsG0280007047.01 | MsG0480021789.01 | 0.801263 | 9.779276e-49 | 4.649704e-46 |
| MsG0280007511.01 | MsG0480021789.01 | 0.837373 | 5.399471e-57 | 6.999293e-54 |
| MsG0280007653.01 | MsG0480021789.01 | 0.804834 | 1.785883e-49 | 9.303176e-47 |
| MsG0280008233.01 | MsG0480021789.01 | 0.800875 | 1.173749e-48 | 5.526486e-46 |
| MsG0280009101.01 | MsG0480021789.01 | 0.806863 | 6.690413e-50 | 3.671313e-47 |
| MsG0280009520.01 | MsG0480021789.01 | 0.807561 | 4.759242e-50 | 2.659221e-47 |
| MsG0280009901.01 | MsG0480021789.01 | 0.840207 | 9.994658e-58 | 1.413598e-54 |
| MsG0280010455.01 | MsG0480021789.01 | 0.845225 | 4.637862e-59 | 7.676108e-56 |
| MsG0280010523.01 | MsG0480021789.01 | 0.837150 | 6.159298e-57 | 7.930266e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021789.01.T01 | MTR_4g076470 | 97.342 | 301 | 8 | 0 | 1 | 301 | 29 | 329 | 0.0 | 595 |
| MsG0480021789.01.T01 | MTR_4g076490 | 86.667 | 300 | 39 | 1 | 1 | 299 | 103 | 402 | 0.0 | 535 |
| MsG0480021789.01.T01 | MTR_4g076440 | 84.053 | 301 | 48 | 0 | 1 | 301 | 29 | 329 | 0.0 | 529 |
| MsG0480021789.01.T01 | MTR_4g076430 | 85.382 | 301 | 44 | 0 | 1 | 301 | 29 | 329 | 0.0 | 527 |
| MsG0480021789.01.T01 | MTR_4g076255 | 70.000 | 300 | 88 | 2 | 3 | 301 | 33 | 331 | 4.09e-151 | 426 |
| MsG0480021789.01.T01 | MTR_4g076500 | 62.418 | 306 | 109 | 5 | 2 | 301 | 85 | 390 | 2.74e-129 | 373 |
| MsG0480021789.01.T01 | MTR_4g076570 | 56.436 | 303 | 125 | 4 | 2 | 297 | 29 | 331 | 2.74e-119 | 347 |
| MsG0480021789.01.T01 | MTR_1g052430 | 56.066 | 305 | 127 | 4 | 2 | 299 | 39 | 343 | 1.41e-115 | 339 |
| MsG0480021789.01.T01 | MTR_2g034480 | 55.195 | 308 | 129 | 4 | 1 | 300 | 33 | 339 | 4.67e-112 | 328 |
| MsG0480021789.01.T01 | MTR_2g034470 | 52.597 | 308 | 137 | 4 | 1 | 300 | 1 | 307 | 2.40e-105 | 310 |
| MsG0480021789.01.T01 | MTR_2g034470 | 52.597 | 308 | 137 | 4 | 1 | 300 | 36 | 342 | 4.21e-105 | 311 |
| MsG0480021789.01.T01 | MTR_2g034440 | 52.104 | 309 | 138 | 5 | 1 | 300 | 28 | 335 | 4.01e-102 | 302 |
| MsG0480021789.01.T01 | MTR_7g081350 | 45.033 | 302 | 155 | 8 | 3 | 296 | 35 | 333 | 6.15e-82 | 251 |
| MsG0480021789.01.T01 | MTR_5g085580 | 42.258 | 310 | 163 | 8 | 2 | 296 | 32 | 340 | 7.28e-76 | 239 |
| MsG0480021789.01.T01 | MTR_7g081370 | 43.813 | 299 | 150 | 8 | 3 | 296 | 36 | 321 | 5.70e-75 | 233 |
| MsG0480021789.01.T01 | MTR_3g080410 | 40.895 | 313 | 171 | 8 | 2 | 300 | 33 | 345 | 8.84e-73 | 228 |
| MsG0480021789.01.T01 | MTR_4g052970 | 38.835 | 309 | 174 | 7 | 2 | 296 | 36 | 343 | 9.28e-70 | 221 |
| MsG0480021789.01.T01 | MTR_2g086530 | 37.338 | 308 | 178 | 6 | 2 | 296 | 15 | 320 | 2.33e-68 | 217 |
| MsG0480021789.01.T01 | MTR_2g086530 | 37.338 | 308 | 178 | 6 | 2 | 296 | 36 | 341 | 3.68e-68 | 217 |
| MsG0480021789.01.T01 | MTR_4g010200 | 38.978 | 313 | 177 | 6 | 2 | 300 | 40 | 352 | 7.29e-68 | 216 |
| MsG0480021789.01.T01 | MTR_4g069940 | 39.806 | 309 | 172 | 7 | 2 | 296 | 36 | 344 | 2.16e-66 | 215 |
| MsG0480021789.01.T01 | MTR_1g056640 | 39.159 | 309 | 174 | 7 | 2 | 296 | 45 | 353 | 1.39e-65 | 213 |
| MsG0480021789.01.T01 | MTR_4g114850 | 35.669 | 314 | 188 | 7 | 2 | 301 | 33 | 346 | 1.97e-65 | 209 |
| MsG0480021789.01.T01 | MTR_4g114850 | 35.669 | 314 | 188 | 7 | 2 | 301 | 33 | 346 | 2.81e-65 | 209 |
| MsG0480021789.01.T01 | MTR_4g114850 | 35.669 | 314 | 188 | 7 | 2 | 301 | 33 | 346 | 4.20e-65 | 209 |
| MsG0480021789.01.T01 | MTR_6g088885 | 35.370 | 311 | 188 | 6 | 3 | 300 | 35 | 345 | 1.25e-64 | 211 |
| MsG0480021789.01.T01 | MTR_4g084480 | 38.312 | 308 | 177 | 7 | 2 | 296 | 39 | 346 | 2.86e-64 | 207 |
| MsG0480021789.01.T01 | MTR_4g084480 | 38.312 | 308 | 177 | 7 | 2 | 296 | 32 | 339 | 3.69e-64 | 207 |
| MsG0480021789.01.T01 | MTR_4g084480 | 38.312 | 308 | 177 | 7 | 2 | 296 | 39 | 346 | 3.90e-64 | 207 |
| MsG0480021789.01.T01 | MTR_1g077990 | 38.141 | 312 | 181 | 8 | 2 | 301 | 38 | 349 | 1.06e-63 | 206 |
| MsG0480021789.01.T01 | MTR_3g116510 | 38.111 | 307 | 176 | 7 | 4 | 296 | 37 | 343 | 1.51e-63 | 207 |
| MsG0480021789.01.T01 | MTR_1g031900 | 38.000 | 300 | 170 | 6 | 5 | 288 | 34 | 333 | 3.93e-63 | 207 |
| MsG0480021789.01.T01 | MTR_1g031900 | 38.000 | 300 | 170 | 6 | 5 | 288 | 34 | 333 | 8.13e-63 | 206 |
| MsG0480021789.01.T01 | MTR_1g022160 | 38.387 | 310 | 176 | 8 | 2 | 296 | 31 | 340 | 2.72e-62 | 203 |
| MsG0480021789.01.T01 | MTR_1g007810 | 37.299 | 311 | 174 | 9 | 2 | 296 | 23 | 328 | 5.60e-62 | 201 |
| MsG0480021789.01.T01 | MTR_1g022160 | 38.387 | 310 | 176 | 8 | 2 | 296 | 31 | 340 | 1.34e-61 | 203 |
| MsG0480021789.01.T01 | MTR_1g022160 | 38.387 | 310 | 176 | 8 | 2 | 296 | 31 | 340 | 1.53e-61 | 202 |
| MsG0480021789.01.T01 | MTR_1g022160 | 38.387 | 310 | 176 | 8 | 2 | 296 | 31 | 340 | 1.63e-61 | 202 |
| MsG0480021789.01.T01 | MTR_3g065460 | 37.209 | 301 | 173 | 6 | 5 | 289 | 34 | 334 | 2.76e-60 | 199 |
| MsG0480021789.01.T01 | MTR_8g102340 | 38.710 | 248 | 140 | 5 | 65 | 300 | 65 | 312 | 9.98e-59 | 195 |
| MsG0480021789.01.T01 | MTR_7g026340 | 36.656 | 311 | 178 | 10 | 2 | 298 | 30 | 335 | 1.33e-58 | 194 |
| MsG0480021789.01.T01 | MTR_7g053500 | 34.603 | 315 | 183 | 10 | 2 | 296 | 33 | 344 | 7.64e-58 | 192 |
| MsG0480021789.01.T01 | MTR_5g078200 | 36.000 | 300 | 176 | 6 | 6 | 289 | 1 | 300 | 1.06e-57 | 195 |
| MsG0480021789.01.T01 | MTR_5g078200 | 35.880 | 301 | 177 | 6 | 5 | 289 | 33 | 333 | 1.17e-57 | 196 |
| MsG0480021789.01.T01 | MTR_2g019345 | 37.338 | 308 | 179 | 7 | 2 | 296 | 31 | 337 | 1.29e-57 | 190 |
| MsG0480021789.01.T01 | MTR_8g012400 | 33.758 | 314 | 189 | 8 | 2 | 297 | 36 | 348 | 1.82e-57 | 191 |
| MsG0480021789.01.T01 | MTR_7g085390 | 35.974 | 303 | 177 | 8 | 10 | 296 | 41 | 342 | 2.66e-55 | 186 |
| MsG0480021789.01.T01 | MTR_3g083580 | 33.439 | 314 | 192 | 7 | 5 | 301 | 36 | 349 | 1.74e-54 | 184 |
| MsG0480021789.01.T01 | MTR_6g032820 | 35.314 | 303 | 177 | 8 | 12 | 296 | 43 | 344 | 3.42e-54 | 182 |
| MsG0480021789.01.T01 | MTR_8g092070 | 34.426 | 305 | 184 | 8 | 12 | 301 | 51 | 354 | 3.47e-53 | 183 |
| MsG0480021789.01.T01 | MTR_4g088155 | 31.962 | 316 | 194 | 8 | 1 | 296 | 29 | 343 | 1.18e-52 | 179 |
| MsG0480021789.01.T01 | MTR_4g132280 | 33.010 | 309 | 191 | 6 | 4 | 296 | 54 | 362 | 5.93e-52 | 178 |
| MsG0480021789.01.T01 | MTR_4g112025 | 34.936 | 312 | 171 | 10 | 10 | 297 | 46 | 349 | 4.52e-50 | 173 |
| MsG0480021789.01.T01 | MTR_8g012400 | 35.573 | 253 | 145 | 7 | 62 | 297 | 17 | 268 | 9.92e-49 | 167 |
| MsG0480021789.01.T01 | MTR_8g085720 | 31.090 | 312 | 199 | 6 | 5 | 300 | 36 | 347 | 1.23e-48 | 169 |
| MsG0480021789.01.T01 | MTR_7g053500 | 36.653 | 251 | 137 | 9 | 65 | 296 | 20 | 267 | 2.75e-48 | 166 |
| MsG0480021789.01.T01 | MTR_4g124440 | 32.680 | 306 | 189 | 9 | 6 | 296 | 40 | 343 | 2.73e-46 | 162 |
| MsG0480021789.01.T01 | MTR_1g053320 | 32.459 | 305 | 189 | 8 | 10 | 297 | 45 | 349 | 1.24e-45 | 161 |
| MsG0480021789.01.T01 | MTR_3g116510 | 40.097 | 207 | 113 | 5 | 101 | 296 | 3 | 209 | 3.08e-45 | 156 |
| MsG0480021789.01.T01 | MTR_3g095050 | 33.115 | 305 | 186 | 10 | 12 | 301 | 51 | 352 | 5.56e-45 | 159 |
| MsG0480021789.01.T01 | MTR_3g031770 | 33.887 | 301 | 183 | 11 | 11 | 297 | 43 | 341 | 4.89e-44 | 157 |
| MsG0480021789.01.T01 | MTR_4g083500 | 33.548 | 310 | 188 | 10 | 2 | 296 | 51 | 357 | 7.43e-44 | 157 |
| MsG0480021789.01.T01 | MTR_2g027560 | 33.224 | 304 | 181 | 10 | 12 | 296 | 45 | 345 | 3.85e-43 | 154 |
| MsG0480021789.01.T01 | MTR_1g010120 | 33.981 | 309 | 187 | 10 | 6 | 299 | 38 | 344 | 1.09e-41 | 150 |
| MsG0480021789.01.T01 | MTR_3g108600 | 32.792 | 308 | 172 | 10 | 5 | 297 | 41 | 328 | 4.10e-38 | 140 |
| MsG0480021789.01.T01 | MTR_4g036680 | 42.222 | 180 | 79 | 6 | 121 | 299 | 21 | 176 | 8.01e-34 | 123 |
| MsG0480021789.01.T01 | MTR_4g036680 | 50.877 | 57 | 28 | 0 | 2 | 58 | 29 | 85 | 4.16e-13 | 67.8 |
| MsG0480021789.01.T01 | MTR_4g036775 | 58.763 | 97 | 39 | 1 | 204 | 299 | 80 | 176 | 2.19e-33 | 122 |
| MsG0480021789.01.T01 | MTR_4g036775 | 50.877 | 57 | 28 | 0 | 2 | 58 | 29 | 85 | 1.49e-13 | 68.9 |
| MsG0480021789.01.T01 | MTR_5g081720 | 28.866 | 291 | 187 | 11 | 21 | 296 | 63 | 348 | 1.55e-31 | 121 |
| MsG0480021789.01.T01 | MTR_4g134280 | 33.766 | 231 | 134 | 9 | 81 | 296 | 2 | 228 | 3.32e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021789.01.T01 | AT4G16260 | 50.489 | 307 | 143 | 5 | 1 | 300 | 1 | 305 | 7.81e-106 | 311 |
| MsG0480021789.01.T01 | AT3G57260 | 54.072 | 307 | 130 | 7 | 1 | 301 | 38 | 339 | 9.34e-106 | 311 |
| MsG0480021789.01.T01 | AT3G57260 | 54.072 | 307 | 130 | 7 | 1 | 301 | 54 | 355 | 1.32e-105 | 312 |
| MsG0480021789.01.T01 | AT4G16260 | 50.325 | 308 | 144 | 5 | 1 | 301 | 30 | 335 | 1.66e-105 | 311 |
| MsG0480021789.01.T01 | AT3G57270 | 49.180 | 305 | 148 | 4 | 3 | 300 | 35 | 339 | 1.52e-98 | 293 |
| MsG0480021789.01.T01 | AT3G57240 | 50.163 | 307 | 137 | 7 | 3 | 301 | 43 | 341 | 1.01e-97 | 291 |
| MsG0480021789.01.T01 | AT5G20390 | 42.667 | 300 | 158 | 9 | 1 | 290 | 39 | 334 | 2.04e-74 | 232 |
| MsG0480021789.01.T01 | AT5G20340 | 42.193 | 301 | 160 | 9 | 1 | 291 | 49 | 345 | 3.28e-74 | 232 |
| MsG0480021789.01.T01 | AT4G26830 | 40.385 | 312 | 173 | 7 | 2 | 300 | 36 | 347 | 8.48e-73 | 231 |
| MsG0480021789.01.T01 | AT4G26830 | 40.385 | 312 | 173 | 7 | 2 | 300 | 32 | 343 | 8.81e-73 | 231 |
| MsG0480021789.01.T01 | AT5G56590 | 37.700 | 313 | 180 | 6 | 3 | 300 | 34 | 346 | 3.89e-72 | 231 |
| MsG0480021789.01.T01 | AT2G05790 | 39.617 | 313 | 175 | 7 | 2 | 300 | 32 | 344 | 6.68e-72 | 229 |
| MsG0480021789.01.T01 | AT5G55180 | 39.490 | 314 | 176 | 8 | 2 | 301 | 34 | 347 | 4.04e-71 | 227 |
| MsG0480021789.01.T01 | AT5G55180 | 39.490 | 314 | 176 | 8 | 2 | 301 | 34 | 347 | 4.88e-71 | 227 |
| MsG0480021789.01.T01 | AT5G20330 | 41.196 | 301 | 163 | 9 | 1 | 291 | 40 | 336 | 1.36e-70 | 222 |
| MsG0480021789.01.T01 | AT1G77790 | 39.344 | 305 | 171 | 8 | 3 | 296 | 38 | 339 | 6.37e-69 | 218 |
| MsG0480021789.01.T01 | AT1G32860 | 38.217 | 314 | 179 | 7 | 2 | 300 | 36 | 349 | 6.66e-69 | 220 |
| MsG0480021789.01.T01 | AT2G16230 | 40.000 | 310 | 172 | 7 | 1 | 296 | 31 | 340 | 2.68e-68 | 221 |
| MsG0480021789.01.T01 | AT1G33220 | 41.608 | 286 | 154 | 8 | 1 | 276 | 40 | 322 | 4.20e-68 | 215 |
| MsG0480021789.01.T01 | AT2G01630 | 38.636 | 308 | 173 | 6 | 5 | 296 | 33 | 340 | 6.69e-67 | 214 |
| MsG0480021789.01.T01 | AT5G42100 | 40.836 | 311 | 168 | 7 | 2 | 296 | 34 | 344 | 1.43e-66 | 214 |
| MsG0480021789.01.T01 | AT5G42100 | 40.836 | 311 | 168 | 7 | 2 | 296 | 34 | 344 | 1.54e-66 | 214 |
| MsG0480021789.01.T01 | AT2G01630 | 39.333 | 300 | 166 | 6 | 5 | 288 | 33 | 332 | 2.77e-66 | 214 |
| MsG0480021789.01.T01 | AT4G18340 | 37.700 | 313 | 182 | 6 | 2 | 301 | 41 | 353 | 4.21e-66 | 212 |
| MsG0480021789.01.T01 | AT4G18340 | 37.700 | 313 | 182 | 6 | 2 | 301 | 41 | 353 | 6.65e-66 | 212 |
| MsG0480021789.01.T01 | AT2G26600 | 35.032 | 314 | 190 | 8 | 2 | 301 | 41 | 354 | 7.55e-66 | 211 |
| MsG0480021789.01.T01 | AT2G01630 | 39.333 | 300 | 166 | 6 | 5 | 288 | 33 | 332 | 9.22e-66 | 214 |
| MsG0480021789.01.T01 | AT4G34480 | 40.453 | 309 | 170 | 7 | 2 | 296 | 33 | 341 | 3.45e-63 | 203 |
| MsG0480021789.01.T01 | AT5G42720 | 38.264 | 311 | 177 | 8 | 1 | 296 | 32 | 342 | 3.87e-63 | 206 |
| MsG0480021789.01.T01 | AT2G27500 | 35.275 | 309 | 186 | 8 | 2 | 296 | 36 | 344 | 1.13e-62 | 203 |
| MsG0480021789.01.T01 | AT2G27500 | 35.275 | 309 | 186 | 8 | 2 | 296 | 36 | 344 | 2.05e-62 | 202 |
| MsG0480021789.01.T01 | AT1G30080 | 37.338 | 308 | 180 | 7 | 2 | 296 | 43 | 350 | 2.23e-62 | 202 |
| MsG0480021789.01.T01 | AT1G30080 | 37.338 | 308 | 180 | 7 | 2 | 296 | 43 | 350 | 3.68e-62 | 202 |
| MsG0480021789.01.T01 | AT4G34480 | 40.453 | 309 | 170 | 7 | 2 | 296 | 33 | 341 | 1.63e-61 | 203 |
| MsG0480021789.01.T01 | AT3G15800 | 36.129 | 310 | 183 | 7 | 2 | 296 | 50 | 359 | 5.69e-61 | 199 |
| MsG0480021789.01.T01 | AT1G77780 | 35.974 | 303 | 181 | 9 | 3 | 296 | 32 | 330 | 4.19e-60 | 196 |
| MsG0480021789.01.T01 | AT5G20560 | 36.842 | 304 | 171 | 9 | 1 | 290 | 40 | 336 | 6.10e-59 | 192 |
| MsG0480021789.01.T01 | AT3G61810 | 33.758 | 314 | 189 | 6 | 3 | 301 | 63 | 372 | 1.32e-58 | 192 |
| MsG0480021789.01.T01 | AT5G24318 | 35.691 | 311 | 179 | 9 | 2 | 296 | 37 | 342 | 1.45e-58 | 192 |
| MsG0480021789.01.T01 | AT5G24318 | 35.691 | 311 | 179 | 9 | 2 | 296 | 37 | 342 | 1.21e-57 | 192 |
| MsG0480021789.01.T01 | AT5G24318 | 35.691 | 311 | 179 | 9 | 2 | 296 | 37 | 342 | 2.48e-57 | 191 |
| MsG0480021789.01.T01 | AT1G66250 | 36.039 | 308 | 180 | 7 | 5 | 296 | 42 | 348 | 2.96e-57 | 192 |
| MsG0480021789.01.T01 | AT3G07320 | 33.227 | 313 | 190 | 8 | 2 | 296 | 32 | 343 | 7.76e-56 | 187 |
| MsG0480021789.01.T01 | AT2G26600 | 35.659 | 258 | 153 | 7 | 57 | 301 | 3 | 260 | 3.41e-55 | 181 |
| MsG0480021789.01.T01 | AT2G27500 | 37.549 | 253 | 145 | 7 | 57 | 296 | 14 | 266 | 1.48e-54 | 180 |
| MsG0480021789.01.T01 | AT4G29360 | 34.727 | 311 | 190 | 6 | 3 | 300 | 45 | 355 | 3.28e-54 | 185 |
| MsG0480021789.01.T01 | AT4G29360 | 34.727 | 311 | 190 | 6 | 3 | 300 | 35 | 345 | 3.96e-54 | 184 |
| MsG0480021789.01.T01 | AT4G14080 | 32.698 | 315 | 194 | 8 | 3 | 300 | 50 | 363 | 4.52e-53 | 180 |
| MsG0480021789.01.T01 | AT1G11820 | 32.000 | 300 | 188 | 6 | 5 | 288 | 54 | 353 | 1.82e-52 | 176 |
| MsG0480021789.01.T01 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 2.65e-52 | 179 |
| MsG0480021789.01.T01 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 2.65e-52 | 179 |
| MsG0480021789.01.T01 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 2.65e-52 | 179 |
| MsG0480021789.01.T01 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 2.65e-52 | 179 |
| MsG0480021789.01.T01 | AT3G13560 | 32.468 | 308 | 192 | 6 | 5 | 296 | 36 | 343 | 2.65e-52 | 179 |
| MsG0480021789.01.T01 | AT5G18220 | 33.887 | 301 | 183 | 7 | 10 | 296 | 45 | 343 | 4.14e-52 | 178 |
| MsG0480021789.01.T01 | AT3G23770 | 33.750 | 320 | 191 | 9 | 2 | 301 | 44 | 362 | 7.06e-52 | 177 |
| MsG0480021789.01.T01 | AT1G11820 | 32.000 | 300 | 188 | 6 | 5 | 288 | 54 | 353 | 1.95e-51 | 176 |
| MsG0480021789.01.T01 | AT1G11820 | 32.000 | 300 | 188 | 6 | 5 | 288 | 54 | 353 | 3.15e-51 | 176 |
| MsG0480021789.01.T01 | AT2G19440 | 34.437 | 302 | 182 | 8 | 10 | 296 | 36 | 336 | 2.69e-50 | 173 |
| MsG0480021789.01.T01 | AT2G19440 | 34.437 | 302 | 182 | 8 | 10 | 296 | 36 | 336 | 2.69e-50 | 173 |
| MsG0480021789.01.T01 | AT5G58090 | 35.333 | 300 | 178 | 9 | 12 | 296 | 39 | 337 | 4.80e-50 | 172 |
| MsG0480021789.01.T01 | AT5G58480 | 34.405 | 311 | 187 | 10 | 6 | 301 | 38 | 346 | 2.54e-49 | 171 |
| MsG0480021789.01.T01 | AT1G64760 | 33.775 | 302 | 184 | 8 | 10 | 296 | 40 | 340 | 2.54e-48 | 168 |
| MsG0480021789.01.T01 | AT1G64760 | 33.775 | 302 | 184 | 8 | 10 | 296 | 40 | 340 | 2.54e-48 | 168 |
| MsG0480021789.01.T01 | AT3G04010 | 32.808 | 317 | 192 | 10 | 1 | 300 | 40 | 352 | 1.49e-46 | 163 |
| MsG0480021789.01.T01 | AT3G55430 | 32.899 | 307 | 186 | 10 | 5 | 296 | 38 | 339 | 8.02e-46 | 160 |
| MsG0480021789.01.T01 | AT4G31140 | 34.211 | 304 | 184 | 10 | 12 | 300 | 44 | 346 | 8.89e-46 | 161 |
| MsG0480021789.01.T01 | AT3G46570 | 34.494 | 316 | 177 | 13 | 2 | 296 | 34 | 340 | 8.98e-45 | 155 |
| MsG0480021789.01.T01 | AT3G24330 | 32.911 | 316 | 189 | 12 | 1 | 297 | 46 | 357 | 1.45e-44 | 158 |
| MsG0480021789.01.T01 | AT2G39640 | 33.663 | 303 | 185 | 9 | 5 | 296 | 39 | 336 | 4.61e-44 | 158 |
| MsG0480021789.01.T01 | AT4G34480 | 42.544 | 228 | 118 | 6 | 82 | 296 | 3 | 230 | 1.90e-43 | 153 |
| MsG0480021789.01.T01 | AT5G64790 | 31.908 | 304 | 191 | 9 | 12 | 300 | 45 | 347 | 2.75e-43 | 154 |
| MsG0480021789.01.T01 | AT4G17180 | 32.226 | 301 | 183 | 9 | 12 | 297 | 42 | 336 | 3.69e-43 | 154 |
| MsG0480021789.01.T01 | AT5G24318 | 39.423 | 208 | 108 | 7 | 102 | 296 | 1 | 203 | 1.60e-40 | 144 |
| MsG0480021789.01.T01 | AT5G20870 | 30.990 | 313 | 189 | 11 | 12 | 300 | 47 | 356 | 6.01e-40 | 146 |
| MsG0480021789.01.T01 | AT3G55780 | 27.815 | 302 | 195 | 11 | 18 | 301 | 58 | 354 | 1.38e-34 | 129 |
Find 71 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTATGTTGGAACCTTTA+AGG | 0.089668 | 4:-64288451 | None:intergenic |
| CAAGCCCTTCAAGCCCTTAA+AGG | 0.219614 | 4:+64288437 | MsG0480021789.01.T01:CDS |
| GCTTGAAGGGCTTGTTCGTC+TGG | 0.228164 | 4:-64288428 | None:intergenic |
| TTCTTTAGGAAGTCTATTAT+TGG | 0.255166 | 4:-64288791 | None:intergenic |
| GCAGCAACCGAACAACATTT+TGG | 0.258550 | 4:+64289178 | MsG0480021789.01.T01:CDS |
| TTCTATGTTGGAACCTTTAA+GGG | 0.304709 | 4:-64288450 | None:intergenic |
| CATGGCAGTGGCAATGTATT+GGG | 0.316261 | 4:-64288627 | None:intergenic |
| TCCACAACTTCTTGACTTGA+TGG | 0.320456 | 4:-64288362 | None:intergenic |
| ATGGCAATGAAGCTACAAAT+TGG | 0.321660 | 4:+64288516 | MsG0480021789.01.T01:CDS |
| CCGCATATACCGAGTCTAAC+TGG | 0.321766 | 4:-64288949 | None:intergenic |
| TCAATAGCTCCGGGTCTCTT+AGG | 0.330851 | 4:-64289112 | None:intergenic |
| TATTGGGCTTCATTGTCATT+AGG | 0.337583 | 4:-64288611 | None:intergenic |
| ACTGGGCATCAAAGAGGTTT+TGG | 0.338461 | 4:-64288931 | None:intergenic |
| GCAATTGACATGACTTTGAT+TGG | 0.342551 | 4:+64288710 | MsG0480021789.01.T01:CDS |
| GTGGTGCTCCATTGTTCTTT+AGG | 0.350917 | 4:-64288805 | None:intergenic |
| TATCCGTACTTCGCTTATAT+CGG | 0.370137 | 4:+64288842 | MsG0480021789.01.T01:CDS |
| TTGATTAATCACGTCAAGAA+TGG | 0.394189 | 4:+64289085 | MsG0480021789.01.T01:CDS |
| GCATGGCAGTGGCAATGTAT+TGG | 0.397820 | 4:-64288628 | None:intergenic |
| ATGCGGCTCTTGAGAAAGTT+GGG | 0.402933 | 4:+64288966 | MsG0480021789.01.T01:CDS |
| CTTGAAGGGCTTGTTCGTCT+GGG | 0.403107 | 4:-64288427 | None:intergenic |
| GTCAGTGAAAACACCATCAT+TGG | 0.415151 | 4:-64288747 | None:intergenic |
| TTGCTGTCGAGACCTTGATT+TGG | 0.421947 | 4:-64288691 | None:intergenic |
| AAAGAGACCAAAATGTTGTT+CGG | 0.442878 | 4:-64289185 | None:intergenic |
| TGGAACCTTTAAGGGCTTGA+AGG | 0.446944 | 4:-64288442 | None:intergenic |
| TGATATTTAGATGATTTGTC+AGG | 0.458349 | 4:-64289211 | None:intergenic |
| CAAGTAAGTCTCAATAGCTC+CGG | 0.465955 | 4:-64289122 | None:intergenic |
| GTGGATTTATATAAGTCAAA+TGG | 0.466757 | 4:+64288380 | MsG0480021789.01.T01:CDS |
| GCCATCTGTAAGAGAAGAAA+GGG | 0.468174 | 4:-64288498 | None:intergenic |
| TATGCGGCTCTTGAGAAAGT+TGG | 0.477765 | 4:+64288965 | MsG0480021789.01.T01:CDS |
| CAACAAGGAAACAATGATGT+TGG | 0.478493 | 4:+64288905 | MsG0480021789.01.T01:CDS |
| AAGAGAAGAAAGGGTTTCCT+TGG | 0.481114 | 4:-64288489 | None:intergenic |
| TGATTAATCACGTCAAGAAT+GGG | 0.486109 | 4:+64289086 | MsG0480021789.01.T01:CDS |
| AACAAGGAAACAATGATGTT+GGG | 0.493013 | 4:+64288906 | MsG0480021789.01.T01:CDS |
| TGGCAATGAAGCTACAAATT+GGG | 0.496926 | 4:+64288517 | MsG0480021789.01.T01:CDS |
| GGAGTTTGCTATGGAATGCT+TGG | 0.498177 | 4:+64288329 | None:intergenic |
| AAAATCAAGTACATCACTGT+TGG | 0.508377 | 4:+64288575 | MsG0480021789.01.T01:CDS |
| TGCCATCTGTAAGAGAAGAA+AGG | 0.516666 | 4:-64288499 | None:intergenic |
| CGCATATACCGAGTCTAACT+GGG | 0.519959 | 4:-64288948 | None:intergenic |
| GGAACCTTTAAGGGCTTGAA+GGG | 0.527762 | 4:-64288441 | None:intergenic |
| ACCCTTTCTTCTCTTACAGA+TGG | 0.527847 | 4:+64288497 | MsG0480021789.01.T01:CDS |
| ACCATCAAGTCAAGAAGTTG+TGG | 0.540439 | 4:+64288361 | MsG0480021789.01.T01:CDS |
| AATCAAATTAGTATAATATG+TGG | 0.545267 | 4:-64289068 | None:intergenic |
| TTGAAGGGCTTGTTCGTCTG+GGG | 0.546385 | 4:-64288426 | None:intergenic |
| ATCAAGGATCAATTCTATGT+TGG | 0.547280 | 4:-64288462 | None:intergenic |
| ATCAGATGGCCATCCACTCT+CGG | 0.548201 | 4:-64289014 | None:intergenic |
| AATTCATATCCACCCAATGA+TGG | 0.549574 | 4:+64288734 | MsG0480021789.01.T01:CDS |
| TCAGTGAAAACACCATCATT+GGG | 0.553202 | 4:-64288746 | None:intergenic |
| ATTGATCCTTGATGTGGCCA+AGG | 0.559139 | 4:+64288472 | MsG0480021789.01.T01:CDS |
| AAGTAAGTCTCAATAGCTCC+GGG | 0.561080 | 4:-64289121 | None:intergenic |
| GGGTTTCCTTGGCCACATCA+AGG | 0.566068 | 4:-64288478 | None:intergenic |
| CTTTGATGCCCAGTTAGACT+CGG | 0.571891 | 4:+64288940 | MsG0480021789.01.T01:CDS |
| TAGTTGTGTCCGAGAGTGGA+TGG | 0.576028 | 4:+64289005 | MsG0480021789.01.T01:CDS |
| TTTGATGAAAATCAGAAGAC+TGG | 0.578091 | 4:+64289154 | MsG0480021789.01.T01:CDS |
| TGCGGCTCTTGAGAAAGTTG+GGG | 0.586062 | 4:+64288967 | MsG0480021789.01.T01:CDS |
| AAGATAGTTGTGTCCGAGAG+TGG | 0.586296 | 4:+64289001 | MsG0480021789.01.T01:CDS |
| ATAGACTTCCTAAAGAACAA+TGG | 0.595560 | 4:+64288797 | MsG0480021789.01.T01:CDS |
| GCACTATCTCCACCATCAGA+TGG | 0.608276 | 4:-64289028 | None:intergenic |
| GGATACACATTGGCAAGAAG+TGG | 0.610222 | 4:-64288824 | None:intergenic |
| GAGAGTGGATGGCCATCTGA+TGG | 0.610447 | 4:+64289016 | MsG0480021789.01.T01:CDS |
| AAATTTACAAGACCAAATCA+AGG | 0.611288 | 4:+64288679 | MsG0480021789.01.T01:CDS |
| CATAGAATTGATCCTTGATG+TGG | 0.622652 | 4:+64288466 | MsG0480021789.01.T01:CDS |
| AGTCTAACTGGGCATCAAAG+AGG | 0.625012 | 4:-64288937 | None:intergenic |
| CCAGTTAGACTCGGTATATG+CGG | 0.629503 | 4:+64288949 | MsG0480021789.01.T01:CDS |
| TTACCGATATAAGCGAAGTA+CGG | 0.629947 | 4:-64288845 | None:intergenic |
| AATGGGACTCCTAAGAGACC+CGG | 0.649769 | 4:+64289103 | MsG0480021789.01.T01:CDS |
| TGTGGAAGCATTGTCAGTTG+AGG | 0.652637 | 4:-64289050 | None:intergenic |
| AGCGAAGTACGGATACACAT+TGG | 0.661063 | 4:-64288834 | None:intergenic |
| GTGAAAACACCATCATTGGG+TGG | 0.672842 | 4:-64288743 | None:intergenic |
| AGTGGATGGCCATCTGATGG+TGG | 0.674681 | 4:+64289019 | MsG0480021789.01.T01:CDS |
| GCGGCTCTTGAGAAAGTTGG+GGG | 0.680343 | 4:+64288968 | MsG0480021789.01.T01:CDS |
| GGACACAACTATCTTCACAT+CGG | 0.708430 | 4:-64288993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAATTAGTATAATATG+TGG | - | Chr4:64289071-64289090 | None:intergenic | 15.0% |
| ! | AAATTTACAAGACCAAATCA+AGG | + | Chr4:64288679-64288698 | MsG0480021789.01.T01:CDS | 25.0% |
| ! | GTGGATTTATATAAGTCAAA+TGG | + | Chr4:64288380-64288399 | MsG0480021789.01.T01:CDS | 25.0% |
| !! | ATTTTTACATCTTGAGCATA+GGG | - | Chr4:64288560-64288579 | None:intergenic | 25.0% |
| !! | TATGCTCTTTTTAAACAACA+AGG | + | Chr4:64288890-64288909 | MsG0480021789.01.T01:CDS | 25.0% |
| !! | TGATATTTAGATGATTTGTC+AGG | - | Chr4:64289214-64289233 | None:intergenic | 25.0% |
| !! | TTCTTTAGGAAGTCTATTAT+TGG | - | Chr4:64288794-64288813 | None:intergenic | 25.0% |
| !!! | GTTGTAAATATTGTTTTGCT+TGG | - | Chr4:64288772-64288791 | None:intergenic | 25.0% |
| AAAATCAAGTACATCACTGT+TGG | + | Chr4:64288575-64288594 | MsG0480021789.01.T01:CDS | 30.0% | |
| AAAGAGACCAAAATGTTGTT+CGG | - | Chr4:64289188-64289207 | None:intergenic | 30.0% | |
| AACAAGGAAACAATGATGTT+GGG | + | Chr4:64288906-64288925 | MsG0480021789.01.T01:CDS | 30.0% | |
| ATAGACTTCCTAAAGAACAA+TGG | + | Chr4:64288797-64288816 | MsG0480021789.01.T01:CDS | 30.0% | |
| ATCAAGGATCAATTCTATGT+TGG | - | Chr4:64288465-64288484 | None:intergenic | 30.0% | |
| ATTCTATGTTGGAACCTTTA+AGG | - | Chr4:64288454-64288473 | None:intergenic | 30.0% | |
| TGATTAATCACGTCAAGAAT+GGG | + | Chr4:64289086-64289105 | MsG0480021789.01.T01:CDS | 30.0% | |
| TTCTATGTTGGAACCTTTAA+GGG | - | Chr4:64288453-64288472 | None:intergenic | 30.0% | |
| TTGATTAATCACGTCAAGAA+TGG | + | Chr4:64289085-64289104 | MsG0480021789.01.T01:CDS | 30.0% | |
| TTTGATGAAAATCAGAAGAC+TGG | + | Chr4:64289154-64289173 | MsG0480021789.01.T01:CDS | 30.0% | |
| ! | CTTCTGATTTTCATCAAACA+TGG | - | Chr4:64289152-64289171 | None:intergenic | 30.0% |
| ! | GATTTTTACATCTTGAGCAT+AGG | - | Chr4:64288561-64288580 | None:intergenic | 30.0% |
| ! | TGCATTTTGAATGTTTTGCA+TGG | - | Chr4:64288648-64288667 | None:intergenic | 30.0% |
| AATTCATATCCACCCAATGA+TGG | + | Chr4:64288734-64288753 | MsG0480021789.01.T01:CDS | 35.0% | |
| ATGGCAATGAAGCTACAAAT+TGG | + | Chr4:64288516-64288535 | MsG0480021789.01.T01:CDS | 35.0% | |
| CAACAAGGAAACAATGATGT+TGG | + | Chr4:64288905-64288924 | MsG0480021789.01.T01:CDS | 35.0% | |
| CATAGAATTGATCCTTGATG+TGG | + | Chr4:64288466-64288485 | MsG0480021789.01.T01:CDS | 35.0% | |
| GCAATTGACATGACTTTGAT+TGG | + | Chr4:64288710-64288729 | MsG0480021789.01.T01:CDS | 35.0% | |
| TATCCGTACTTCGCTTATAT+CGG | + | Chr4:64288842-64288861 | MsG0480021789.01.T01:CDS | 35.0% | |
| TATTGGGCTTCATTGTCATT+AGG | - | Chr4:64288614-64288633 | None:intergenic | 35.0% | |
| TCAGTGAAAACACCATCATT+GGG | - | Chr4:64288749-64288768 | None:intergenic | 35.0% | |
| TGGCAATGAAGCTACAAATT+GGG | + | Chr4:64288517-64288536 | MsG0480021789.01.T01:CDS | 35.0% | |
| TTACCGATATAAGCGAAGTA+CGG | - | Chr4:64288848-64288867 | None:intergenic | 35.0% | |
| !! | CATAGGGTGTCACATATTTT+TGG | - | Chr4:64288544-64288563 | None:intergenic | 35.0% |
| AAGAGAAGAAAGGGTTTCCT+TGG | - | Chr4:64288492-64288511 | None:intergenic | 40.0% | |
| AAGTAAGTCTCAATAGCTCC+GGG | - | Chr4:64289124-64289143 | None:intergenic | 40.0% | |
| ACCATCAAGTCAAGAAGTTG+TGG | + | Chr4:64288361-64288380 | MsG0480021789.01.T01:CDS | 40.0% | |
| ACCCTTTCTTCTCTTACAGA+TGG | + | Chr4:64288497-64288516 | MsG0480021789.01.T01:CDS | 40.0% | |
| CAAGTAAGTCTCAATAGCTC+CGG | - | Chr4:64289125-64289144 | None:intergenic | 40.0% | |
| GCCATCTGTAAGAGAAGAAA+GGG | - | Chr4:64288501-64288520 | None:intergenic | 40.0% | |
| GGACACAACTATCTTCACAT+CGG | - | Chr4:64288996-64289015 | None:intergenic | 40.0% | |
| GTCAGTGAAAACACCATCAT+TGG | - | Chr4:64288750-64288769 | None:intergenic | 40.0% | |
| TGCCATCTGTAAGAGAAGAA+AGG | - | Chr4:64288502-64288521 | None:intergenic | 40.0% | |
| ! | TCCACAACTTCTTGACTTGA+TGG | - | Chr4:64288365-64288384 | None:intergenic | 40.0% |
| ! | TTGAATGTTTTGCATGGCAG+TGG | - | Chr4:64288642-64288661 | None:intergenic | 40.0% |
| AAGATAGTTGTGTCCGAGAG+TGG | + | Chr4:64289001-64289020 | MsG0480021789.01.T01:CDS | 45.0% | |
| AGCGAAGTACGGATACACAT+TGG | - | Chr4:64288837-64288856 | None:intergenic | 45.0% | |
| AGTCTAACTGGGCATCAAAG+AGG | - | Chr4:64288940-64288959 | None:intergenic | 45.0% | |
| ATGCGGCTCTTGAGAAAGTT+GGG | + | Chr4:64288966-64288985 | MsG0480021789.01.T01:CDS | 45.0% | |
| ATTGATCCTTGATGTGGCCA+AGG | + | Chr4:64288472-64288491 | MsG0480021789.01.T01:CDS | 45.0% | |
| CATGGCAGTGGCAATGTATT+GGG | - | Chr4:64288630-64288649 | None:intergenic | 45.0% | |
| CGCATATACCGAGTCTAACT+GGG | - | Chr4:64288951-64288970 | None:intergenic | 45.0% | |
| CTTTGATGCCCAGTTAGACT+CGG | + | Chr4:64288940-64288959 | MsG0480021789.01.T01:CDS | 45.0% | |
| GGATACACATTGGCAAGAAG+TGG | - | Chr4:64288827-64288846 | None:intergenic | 45.0% | |
| GTGAAAACACCATCATTGGG+TGG | - | Chr4:64288746-64288765 | None:intergenic | 45.0% | |
| GTGGTGCTCCATTGTTCTTT+AGG | - | Chr4:64288808-64288827 | None:intergenic | 45.0% | |
| TATGCGGCTCTTGAGAAAGT+TGG | + | Chr4:64288965-64288984 | MsG0480021789.01.T01:CDS | 45.0% | |
| TTGCTGTCGAGACCTTGATT+TGG | - | Chr4:64288694-64288713 | None:intergenic | 45.0% | |
| ! | ACTGGGCATCAAAGAGGTTT+TGG | - | Chr4:64288934-64288953 | None:intergenic | 45.0% |
| ! | CCAGTTAGACTCGGTATATG+CGG | + | Chr4:64288949-64288968 | MsG0480021789.01.T01:CDS | 45.0% |
| ! | GCAGCAACCGAACAACATTT+TGG | + | Chr4:64289178-64289197 | MsG0480021789.01.T01:CDS | 45.0% |
| ! | GGAACCTTTAAGGGCTTGAA+GGG | - | Chr4:64288444-64288463 | None:intergenic | 45.0% |
| ! | TGGAACCTTTAAGGGCTTGA+AGG | - | Chr4:64288445-64288464 | None:intergenic | 45.0% |
| !! | TGTGGAAGCATTGTCAGTTG+AGG | - | Chr4:64289053-64289072 | None:intergenic | 45.0% |
| AATGGGACTCCTAAGAGACC+CGG | + | Chr4:64289103-64289122 | MsG0480021789.01.T01:CDS | 50.0% | |
| ATCAGATGGCCATCCACTCT+CGG | - | Chr4:64289017-64289036 | None:intergenic | 50.0% | |
| CAAGCCCTTCAAGCCCTTAA+AGG | + | Chr4:64288437-64288456 | MsG0480021789.01.T01:CDS | 50.0% | |
| CCGCATATACCGAGTCTAAC+TGG | - | Chr4:64288952-64288971 | None:intergenic | 50.0% | |
| GCACTATCTCCACCATCAGA+TGG | - | Chr4:64289031-64289050 | None:intergenic | 50.0% | |
| GCATGGCAGTGGCAATGTAT+TGG | - | Chr4:64288631-64288650 | None:intergenic | 50.0% | |
| TAGTTGTGTCCGAGAGTGGA+TGG | + | Chr4:64289005-64289024 | MsG0480021789.01.T01:CDS | 50.0% | |
| TCAATAGCTCCGGGTCTCTT+AGG | - | Chr4:64289115-64289134 | None:intergenic | 50.0% | |
| TGCGGCTCTTGAGAAAGTTG+GGG | + | Chr4:64288967-64288986 | MsG0480021789.01.T01:CDS | 50.0% | |
| ! | CTTGAAGGGCTTGTTCGTCT+GGG | - | Chr4:64288430-64288449 | None:intergenic | 50.0% |
| ! | TTGAAGGGCTTGTTCGTCTG+GGG | - | Chr4:64288429-64288448 | None:intergenic | 50.0% |
| AGTGGATGGCCATCTGATGG+TGG | + | Chr4:64289019-64289038 | MsG0480021789.01.T01:CDS | 55.0% | |
| GAGAGTGGATGGCCATCTGA+TGG | + | Chr4:64289016-64289035 | MsG0480021789.01.T01:CDS | 55.0% | |
| GCGGCTCTTGAGAAAGTTGG+GGG | + | Chr4:64288968-64288987 | MsG0480021789.01.T01:CDS | 55.0% | |
| GGGTTTCCTTGGCCACATCA+AGG | - | Chr4:64288481-64288500 | None:intergenic | 55.0% | |
| ! | GCTTGAAGGGCTTGTTCGTC+TGG | - | Chr4:64288431-64288450 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 64288344 | 64289249 | 64288344 | ID=MsG0480021789.01;Name=MsG0480021789.01 |
| Chr4 | mRNA | 64288344 | 64289249 | 64288344 | ID=MsG0480021789.01.T01;Parent=MsG0480021789.01;Name=MsG0480021789.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|301 |
| Chr4 | exon | 64288344 | 64289249 | 64288344 | ID=MsG0480021789.01.T01:exon:7757;Parent=MsG0480021789.01.T01 |
| Chr4 | CDS | 64288344 | 64289249 | 64288344 | ID=MsG0480021789.01.T01:cds;Parent=MsG0480021789.01.T01 |
| Gene Sequence |
| Protein sequence |
