AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018860.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018860.01.T01 MTR_4g019340 86.600 500 31 4 11 507 37 503 0.0 835
MsG0480018860.01.T01 MTR_4g017830 73.410 519 118 5 1 517 1 501 0.0 738
MsG0480018860.01.T01 MTR_4g017440 65.631 515 150 7 4 513 6 498 0.0 636
MsG0480018860.01.T01 MTR_4g017410 64.583 528 140 11 1 521 1 488 0.0 622
MsG0480018860.01.T01 MTR_4g017470 60.152 527 151 6 1 521 1 474 0.0 574
MsG0480018860.01.T01 MTR_4g017550 64.050 484 141 11 39 517 18 473 0.0 559
MsG0480018860.01.T01 MTR_4g017550 28.846 260 137 10 6 247 242 471 4.82e-12 68.6
MsG0480018860.01.T01 MTR_4g017610 59.339 514 166 11 2 513 3 475 0.0 554
MsG0480018860.01.T01 MTR_4g019310 42.453 530 244 17 1 513 1 486 1.91e-117 356
MsG0480018860.01.T01 MTR_7g066260 34.026 529 261 15 5 518 8 463 4.28e-77 251
MsG0480018860.01.T01 MTR_7g066340 32.959 534 266 13 1 520 1 456 6.19e-77 250
MsG0480018860.01.T01 MTR_7g066570 34.840 531 279 15 5 521 7 484 1.58e-75 249
MsG0480018860.01.T01 MTR_7g066350 32.535 501 245 11 8 489 5 431 1.32e-73 241
MsG0480018860.01.T01 MTR_7g066350 28.571 245 145 8 274 510 9 231 5.12e-15 77.8
MsG0480018860.01.T01 MTR_7g066410 33.212 551 277 15 13 519 11 514 9.13e-73 240
MsG0480018860.01.T01 MTR_7g058710 31.550 542 295 12 1 524 1 484 1.47e-72 239
MsG0480018860.01.T01 MTR_7g066430 33.784 518 293 11 13 517 5 485 9.84e-70 232
MsG0480018860.01.T01 MTR_7g066400 31.970 538 250 14 1 520 1 440 9.30e-68 225
MsG0480018860.01.T01 MTR_7g012680 33.333 540 250 17 1 521 1 449 1.86e-65 219
MsG0480018860.01.T01 MTR_1g041315 32.617 512 249 16 1 484 1 444 2.35e-65 220
MsG0480018860.01.T01 MTR_7g062280 33.333 552 280 18 1 524 1 492 1.30e-63 216
MsG0480018860.01.T01 MTR_7g063900 34.004 497 277 18 1 484 1 459 7.75e-62 211
MsG0480018860.01.T01 MTR_7g066360 32.143 532 265 15 2 520 4 452 2.44e-60 206
MsG0480018860.01.T01 MTR_7g063880 31.716 536 283 18 1 522 1 467 2.18e-59 204
MsG0480018860.01.T01 MTR_7g063660 33.270 526 280 19 13 524 10 478 3.31e-59 203
MsG0480018860.01.T01 MTR_7g066290 36.220 381 200 11 3 365 6 361 5.62e-58 199
MsG0480018860.01.T01 MTR_7g066580 30.994 513 265 15 18 515 1 439 2.10e-57 198
MsG0480018860.01.T01 MTR_7g062300 32.448 527 290 16 1 516 1 472 7.08e-57 197
MsG0480018860.01.T01 MTR_7g063840 30.813 529 296 15 7 524 5 474 4.83e-55 192
MsG0480018860.01.T01 MTR_7g066310 29.287 519 216 12 13 520 8 386 3.53e-53 186
MsG0480018860.01.T01 MTR_7g066310 34.545 110 64 3 274 376 7 115 8.42e-11 64.3
MsG0480018860.01.T01 MTR_4g019240 77.419 124 23 4 1 122 1 121 6.47e-52 175
MsG0480018860.01.T01 MTR_4g019240 68.421 57 8 1 465 521 112 158 1.50e-11 63.9
MsG0480018860.01.T01 MTR_7g063890 30.478 502 272 17 6 481 22 472 1.05e-50 181
MsG0480018860.01.T01 MTR_2g029400 30.103 485 229 11 8 484 10 392 2.03e-50 178
MsG0480018860.01.T01 MTR_7g063920 30.377 530 270 17 1 524 1 437 4.65e-50 178
MsG0480018860.01.T01 MTR_7g063820 32.228 543 291 20 1 524 1 485 9.13e-50 178
MsG0480018860.01.T01 MTR_7g063830 31.929 451 248 14 1 434 1 409 2.64e-47 171
MsG0480018860.01.T01 MTR_7g063670 30.361 527 274 19 6 521 11 455 7.06e-43 159
MsG0480018860.01.T01 MTR_7g066480 35.422 367 178 12 13 357 17 346 9.08e-42 155
MsG0480018860.01.T01 MTR_3g065200 28.600 507 259 15 13 511 4 415 9.28e-42 156
MsG0480018860.01.T01 MTR_7g058700 33.994 353 167 14 24 356 531 837 3.77e-40 155
MsG0480018860.01.T01 MTR_3g007740 29.379 531 272 21 1 517 1 442 8.19e-40 150
MsG0480018860.01.T01 MTR_7g066490 32.778 360 183 10 13 357 17 332 2.81e-36 140
MsG0480018860.01.T01 MTR_7g066280 26.351 444 254 13 99 520 1 393 3.82e-33 131
MsG0480018860.01.T01 MTR_7g066680 32.110 327 166 9 220 513 31 334 1.56e-31 125
MsG0480018860.01.T01 MTR_1g014060 33.191 235 123 7 21 245 9 219 9.37e-27 112
MsG0480018860.01.T01 MTR_1g014060 35.484 217 95 7 304 517 210 384 7.21e-19 89.0
MsG0480018860.01.T01 MTR_4g019350 51.485 101 36 3 332 431 1 89 5.31e-23 93.6
MsG0480018860.01.T01 MTR_8g445860 30.705 241 149 5 10 247 11 236 3.06e-21 93.2
MsG0480018860.01.T01 MTR_8g445860 30.165 242 143 6 274 511 13 232 2.42e-19 87.8
MsG0480018860.01.T01 MTR_7g062270 35.437 206 100 7 1 198 1 181 5.74e-21 95.5
MsG0480018860.01.T01 MTR_1g115440 30.469 256 150 8 1 247 1 237 1.13e-20 91.7
MsG0480018860.01.T01 MTR_1g115440 30.620 258 124 10 274 511 11 233 2.00e-17 82.4
MsG0480018860.01.T01 MTR_7g063850 26.807 332 189 10 198 522 3 287 2.10e-20 92.0
MsG0480018860.01.T01 MTR_7g063720 29.811 265 132 7 270 527 19 236 3.01e-20 90.5
MsG0480018860.01.T01 MTR_8g023240 23.967 363 220 12 6 353 31 352 3.68e-19 91.3
MsG0480018860.01.T01 MTR_0150s0010 30.120 249 137 8 274 511 10 232 7.65e-18 83.6
MsG0480018860.01.T01 MTR_0150s0010 28.216 241 152 4 13 247 11 236 3.70e-17 81.3
MsG0480018860.01.T01 MTR_7g100420 31.724 290 166 7 226 513 134 393 3.65e-17 84.0
MsG0480018860.01.T01 MTR_1g115455 33.607 122 64 2 13 130 10 118 5.20e-13 69.3
MsG0480018860.01.T01 MTR_0150s0030 34.314 102 58 2 274 372 8 103 5.94e-13 68.6
MsG0480018860.01.T01 MTR_8g445910 35.294 102 57 2 274 372 8 103 8.03e-13 69.3
MsG0480018860.01.T01 MTR_1g115450 35.043 117 63 1 10 126 5 108 1.29e-12 65.9
MsG0480018860.01.T01 MTR_1g115450 39.241 79 46 1 274 350 7 85 4.56e-12 64.3
MsG0480018860.01.T01 MTR_8g044880 35.294 102 57 2 274 372 8 103 5.07e-12 67.0
MsG0480018860.01.T01 MTR_6g006800 61.702 47 17 1 1 47 1 46 1.66e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018860.01.T01 AT3G09140 31.676 543 274 17 9 513 6 489 6.38e-59 203
MsG0480018860.01.T01 AT3G09140 27.917 240 145 10 270 491 5 234 1.02e-11 67.8
MsG0480018860.01.T01 AT5G01120 30.902 521 303 14 9 513 6 485 4.17e-58 201
MsG0480018860.01.T01 AT5G43240 31.955 532 279 18 13 513 10 489 1.04e-55 195
MsG0480018860.01.T01 AT5G43240 31.955 532 279 18 13 513 10 489 1.04e-55 195
MsG0480018860.01.T01 AT5G43240 31.955 532 279 18 13 513 10 489 1.04e-55 195
MsG0480018860.01.T01 AT5G01130 31.287 505 276 14 2 503 4 440 1.13e-55 193
MsG0480018860.01.T01 AT3G09140 30.123 571 274 18 9 513 6 517 1.34e-53 190
MsG0480018860.01.T01 AT3G09140 27.055 292 164 12 270 525 5 283 8.54e-13 71.2
MsG0480018860.01.T01 AT5G01150 30.189 530 294 17 2 513 4 475 4.18e-49 177
MsG0480018860.01.T01 AT5G01140 30.962 520 275 18 2 513 4 447 7.68e-48 173
MsG0480018860.01.T01 AT3G09110 33.828 337 189 8 9 335 6 318 3.08e-45 162
MsG0480018860.01.T01 AT5G37320 28.113 530 315 15 7 520 3 482 8.33e-43 159
MsG0480018860.01.T01 AT3G09120 32.012 328 198 6 9 328 3 313 1.69e-41 151
MsG0480018860.01.T01 AT3G09120 28.000 250 142 8 274 511 6 229 5.44e-12 67.4
MsG0480018860.01.T01 AT5G43240 30.376 372 198 13 166 513 11 345 7.97e-27 112

Find 108 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGTTGTTGATCATTGTTC+TGG 0.199914 4:+10708366 None:intergenic
TAATAAACAGCCTAAGAATT+TGG 0.203171 4:-10708084 MsG0480018860.01.T01:CDS
TGGCGGGTTGTCTTTGTTCT+TGG 0.234472 4:+10705586 None:intergenic
CCTCTTGATTTGCAATTTGC+AGG 0.240565 4:-10704440 MsG0480018860.01.T01:CDS
TTGCACCCGCGACATTAAAA+TGG 0.255172 4:-10705531 MsG0480018860.01.T01:CDS
GGTATTGCTGATGCTTTAAA+TGG 0.278450 4:-10708035 MsG0480018860.01.T01:CDS
ACCTCACTCCAAACGTTGTT+TGG 0.290443 4:-10708280 MsG0480018860.01.T01:CDS
CATGCAGATGTTGATGGAAT+TGG 0.293472 4:-10707934 MsG0480018860.01.T01:CDS
CCACTCACTACATATTATTA+TGG 0.320058 4:-10705224 MsG0480018860.01.T01:CDS
AGGGTCCATTGTAAAGGTTT+TGG 0.343635 4:-10705408 MsG0480018860.01.T01:CDS
AATGATTCACATGGATTCTT+CGG 0.347163 4:+10708227 None:intergenic
AGCTTCCTTACAATACCATT+AGG 0.351633 4:-10705428 MsG0480018860.01.T01:CDS
GAGAGTGTCAACGAAGTCTT+TGG 0.363125 4:+10708439 None:intergenic
ACTGCTGATGCAAACTGGTT+TGG 0.367245 4:+10705566 None:intergenic
GAAGATTGTGCCAAGTTCTT+TGG 0.367844 4:-10707964 MsG0480018860.01.T01:CDS
GAATTTGGATTCTGAGGGTC+AGG 0.378169 4:-10708069 MsG0480018860.01.T01:CDS
CATTGTTCTGGGTGGTTAAG+AGG 0.378910 4:+10708378 None:intergenic
GCTTCCTTACAATACCATTA+GGG 0.381396 4:-10705427 MsG0480018860.01.T01:CDS
CCCTCAGAATCCAAATTCTT+AGG 0.386443 4:+10708074 None:intergenic
CTTTGACTGCTGATGCAAAC+TGG 0.388699 4:+10705561 None:intergenic
CACACGCAACATTGGAAAAC+AGG 0.390766 4:-10707880 MsG0480018860.01.T01:CDS
AGCAAACGCCTTGACTGAAA+TGG 0.392187 4:-10705093 MsG0480018860.01.T01:CDS
GGAATGTTGAGGGGCTGGTT+TGG 0.395287 4:+10705260 None:intergenic
ATGCAGATGTTGATGGAATT+GGG 0.399870 4:-10707933 MsG0480018860.01.T01:CDS
TTCTGATTTGAGTCAATTAG+AGG 0.405222 4:-10707907 MsG0480018860.01.T01:CDS
TTGTTGTTGATCATTGTTCT+GGG 0.408161 4:+10708367 None:intergenic
GTATTGCTGATGCTTTAAAT+GGG 0.415851 4:-10708034 MsG0480018860.01.T01:CDS
ACAGGGTTCCAAACAACGTT+TGG 0.415978 4:+10708272 None:intergenic
CAGAGGCTCATGAGAGGTTA+AGG 0.420057 4:+10705634 None:intergenic
ATTCTTAGGCTGTTTATTAG+TGG 0.429316 4:+10708088 None:intergenic
TTCTTAGGCTGTTTATTAGT+GGG 0.434937 4:+10708089 None:intergenic
AACGGTAGAATTAAAGATAG+AGG 0.436841 4:-10705153 MsG0480018860.01.T01:CDS
CAGAATCTTGATTGTACTTG+TGG 0.438965 4:-10708116 MsG0480018860.01.T01:CDS
ACTAGTTTGAACACACTTTG+AGG 0.444744 4:+10704335 None:intergenic
ACCATTAGGGTCCATTGTAA+AGG 0.460196 4:-10705414 MsG0480018860.01.T01:CDS
TCTGAGGGTCAGGGGAATAG+TGG 0.460813 4:-10708059 MsG0480018860.01.T01:CDS
CGCTCCATGTTACTCAATCC+TGG 0.462371 4:-10705305 MsG0480018860.01.T01:CDS
ACCTTTACAATGGACCCTAA+TGG 0.477568 4:+10705413 None:intergenic
AACAACATTTGTTTGCAGAC+AGG 0.485916 4:+10708254 None:intergenic
CATGAGGAATGTTGAGGGGC+TGG 0.489637 4:+10705255 None:intergenic
GCTGATGCAAACTGGTTTGG+CGG 0.490283 4:+10705569 None:intergenic
GACTTCCATGCAGATGTTGA+TGG 0.493543 4:-10707940 MsG0480018860.01.T01:CDS
GCCTAAGAATTTGGATTCTG+AGG 0.494703 4:-10708075 MsG0480018860.01.T01:CDS
ACAACATTTGTTTGCAGACA+GGG 0.497506 4:+10708255 None:intergenic
ATGGAAGTCACCAAAGAACT+TGG 0.501440 4:+10707954 None:intergenic
GTACAAGAGTGTAGAGAGCT+TGG 0.505497 4:-10705351 MsG0480018860.01.T01:CDS
ACTACATATTATTATGGTAC+AGG 0.518635 4:-10705218 MsG0480018860.01.T01:CDS
TAGTTATCGTTGTTATCAAA+CGG 0.519836 4:-10705171 MsG0480018860.01.T01:CDS
TTCAAAATTGTATTTGTCAG+AGG 0.520812 4:+10705617 None:intergenic
TTAATTCTTTCAAATATGAA+AGG 0.523699 4:+10704958 None:intergenic
TGGACCCTAATGGTATTGTA+AGG 0.526033 4:+10705423 None:intergenic
TAGTAGCAAGTGGAAGAGAA+AGG 0.530533 4:+10708408 None:intergenic
TCAAAGTGTGGGGCGACACC+AGG 0.532172 4:+10705287 None:intergenic
AGGCAAGAATTAGCAGAAAG+TGG 0.533853 4:+10704978 None:intergenic
CCTTGTTGATCTTGAAGTGA+AGG 0.535507 4:-10704928 MsG0480018860.01.T01:CDS
TCAAAATTTACACTGACTAG+TGG 0.539589 4:-10704388 MsG0480018860.01.T01:CDS
TGAACATTGATGACACTGAA+TGG 0.541744 4:-10708187 MsG0480018860.01.T01:CDS
CTGATGCAAACTGGTTTGGC+GGG 0.543289 4:+10705570 None:intergenic
CTTCAAGATCAACAAGGGGA+AGG 0.544062 4:+10704934 None:intergenic
ATTTACACTGACTAGTGGAC+TGG 0.547720 4:-10704383 MsG0480018860.01.T01:CDS
TAGAGAGCTTGGACTCTTCG+TGG 0.547747 4:-10705340 MsG0480018860.01.T01:CDS
GGTTTGGACAATCAAAGTGT+GGG 0.554597 4:+10705276 None:intergenic
GAGGAAGTCACACGCAACAT+TGG 0.558335 4:-10707888 MsG0480018860.01.T01:CDS
TCCAAACAACGTTTGGAGTG+AGG 0.564746 4:+10708279 None:intergenic
TCTTGGGTCCATTTCAGTCA+AGG 0.565375 4:+10705085 None:intergenic
GGAGTGATTTCTAAGTCGCA+TGG 0.571812 4:-10705128 MsG0480018860.01.T01:CDS
GTAGAATTAAAGATAGAGGG+AGG 0.580072 4:-10705149 MsG0480018860.01.T01:CDS
ATTTGGATTCTGAGGGTCAG+GGG 0.580968 4:-10708067 MsG0480018860.01.T01:CDS
ACGGTAGAATTAAAGATAGA+GGG 0.581849 4:-10705152 MsG0480018860.01.T01:CDS
ACCATCCAAAACCTTTACAA+TGG 0.583435 4:+10705403 None:intergenic
CCTAAGAATTTGGATTCTGA+GGG 0.584987 4:-10708074 MsG0480018860.01.T01:CDS
TCTCCTACACTATATAATGC+CGG 0.585136 4:+10705017 None:intergenic
TCAGAATCATCATCATTCCT+CGG 0.586673 4:-10708335 MsG0480018860.01.T01:CDS
TGGTTTGGACAATCAAAGTG+TGG 0.586964 4:+10705275 None:intergenic
GAAGTCAACAAAGTTTCCAC+AGG 0.594870 4:+10705457 None:intergenic
GAGGAATGATGATGATTCTG+AGG 0.600974 4:+10708337 None:intergenic
CTGTCTATTAAGATTGTCAG+TGG 0.606472 4:+10708494 None:intergenic
CCTTCACTTCAAGATCAACA+AGG 0.610416 4:+10704928 None:intergenic
AATTTGGATTCTGAGGGTCA+GGG 0.610725 4:-10708068 MsG0480018860.01.T01:CDS
CAATTCCATCAACATCTGCA+TGG 0.613002 4:+10707935 None:intergenic
TATTGCTGATGCTTTAAATG+GGG 0.614508 4:-10708033 MsG0480018860.01.T01:CDS
AGGTTAAGGTGTACTTGAGG+AGG 0.616375 4:+10705648 None:intergenic
AGGCGAATGATAGTAGCAAG+TGG 0.618314 4:+10708398 None:intergenic
CCTGCAAATTGCAAATCAAG+AGG 0.619634 4:+10704440 None:intergenic
ATGTACATGAGGAATGTTGA+GGG 0.622021 4:+10705250 None:intergenic
TTGTTGATCATTGTTCTGGG+TGG 0.622500 4:+10708370 None:intergenic
GTGAGTGGTGGATGTACATG+AGG 0.635076 4:+10705239 None:intergenic
GATAAGCATTGGTGAAGCTG+AGG 0.638424 4:-10704904 MsG0480018860.01.T01:intron
TTCTTGCATAATGATTCACA+TGG 0.645885 4:+10708218 None:intergenic
TTGATGTCAAGGAAGCTGCA+AGG 0.648287 4:+10704407 None:intergenic
GGTGGGATTTGTGAAGAGAC+CGG 0.651602 4:-10705036 MsG0480018860.01.T01:CDS
CTTCACTTCAAGATCAACAA+GGG 0.654366 4:+10704929 None:intergenic
GAAGTGAAGGTGATAAGCAT+TGG 0.654807 4:-10704915 MsG0480018860.01.T01:CDS
TAATAATATGTAGTGAGTGG+TGG 0.656097 4:+10705227 None:intergenic
TGCAGATGTTGATGGAATTG+GGG 0.656452 4:-10707932 MsG0480018860.01.T01:CDS
AGACCGGCATTATATAGTGT+AGG 0.657855 4:-10705020 MsG0480018860.01.T01:CDS
ATAATCTGTGCAGAAGCCTG+TGG 0.660631 4:-10705473 MsG0480018860.01.T01:CDS
GAGGGTCAGGGGAATAGTGG+TGG 0.663204 4:-10708056 MsG0480018860.01.T01:CDS
GAGAGGTTAAGGTGTACTTG+AGG 0.667782 4:+10705645 None:intergenic
GTTTGGACAATCAAAGTGTG+GGG 0.669274 4:+10705277 None:intergenic
ATTTGTCAGAGGCTCATGAG+AGG 0.675408 4:+10705628 None:intergenic
TTCACTTCAAGATCAACAAG+GGG 0.676098 4:+10704930 None:intergenic
GATGTACATGAGGAATGTTG+AGG 0.679220 4:+10705249 None:intergenic
ACGCAACATTGGAAAACAGG+AGG 0.693923 4:-10707877 MsG0480018860.01.T01:intron
GACACCAGGATTGAGTAACA+TGG 0.694101 4:+10705301 None:intergenic
ATGTCAAGGAAGCTGCAAGG+AGG 0.721178 4:+10704410 None:intergenic
CCATAATAATATGTAGTGAG+TGG 0.727149 4:+10705224 None:intergenic
TGTACATGAGGAATGTTGAG+GGG 0.757600 4:+10705251 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAATAATTAATGAATAA+TGG - Chr4:10705714-10705733 MsG0480018860.01.T01:intron 10.0%
!!! ATTTTAAAAGAATGTTATAT+TGG - Chr4:10707130-10707149 MsG0480018860.01.T01:intron 10.0%
!!! CAATTTATTTTTTAAAAACT+CGG + Chr4:10705383-10705402 None:intergenic 10.0%
!!! TTTTAAAAGAATGTTATATT+GGG - Chr4:10707131-10707150 MsG0480018860.01.T01:intron 10.0%
!! AAAAAATAGAAAGAAAAGTA+AGG - Chr4:10705955-10705974 MsG0480018860.01.T01:intron 15.0%
!! TAATAAAATTATTGGACTTA+TGG + Chr4:10708176-10708195 None:intergenic 15.0%
!! TTAATTCTTTCAAATATGAA+AGG + Chr4:10707914-10707933 None:intergenic 15.0%
!! TTTAAAAGAATGTTATATTG+GGG - Chr4:10707132-10707151 MsG0480018860.01.T01:intron 15.0%
!!! ACATCTTTTTTTAATTTGTT+GGG + Chr4:10707813-10707832 None:intergenic 15.0%
!!! TTTTACTGATTGAATAAAAT+TGG - Chr4:10706262-10706281 MsG0480018860.01.T01:intron 15.0%
!! AAAAATCAACCTCAAATTAT+AGG + Chr4:10705791-10705810 None:intergenic 20.0%
!! AAATTAAAAAAAGATGTGGT+GGG - Chr4:10707816-10707835 MsG0480018860.01.T01:intron 20.0%
!! ATACAAGATATTAAACCAAA+CGG + Chr4:10707077-10707096 None:intergenic 20.0%
!! ATAGAGTACAATAGATTTAA+GGG + Chr4:10706200-10706219 None:intergenic 20.0%
!! ATTAGTTCGATAACTAAATA+AGG + Chr4:10706401-10706420 None:intergenic 20.0%
!! CAACAAATTAAAAAAAGATG+TGG - Chr4:10707812-10707831 MsG0480018860.01.T01:intron 20.0%
!! TAGTGTACCATAAATAAAAA+GGG - Chr4:10706615-10706634 MsG0480018860.01.T01:intron 20.0%
!! TAGTTGTTGTACTTAAATTA+CGG - Chr4:10706689-10706708 MsG0480018860.01.T01:intron 20.0%
!! TTAGACAACAAATAAACAAA+AGG + Chr4:10708028-10708047 None:intergenic 20.0%
!! TTAGTGTACCATAAATAAAA+AGG - Chr4:10706614-10706633 MsG0480018860.01.T01:intron 20.0%
!! TTAGTTCGATAACTAAATAA+GGG + Chr4:10706400-10706419 None:intergenic 20.0%
!! TTGATGGGATAAAAAATATT+AGG + Chr4:10706162-10706181 None:intergenic 20.0%
!!! ATCTTTTTTTAATTTGTTGG+GGG + Chr4:10707811-10707830 None:intergenic 20.0%
!!! ATGTTTTCCCTTTTTATTTA+TGG + Chr4:10706625-10706644 None:intergenic 20.0%
!!! CACATCTTTTTTTAATTTGT+TGG + Chr4:10707814-10707833 None:intergenic 20.0%
!!! CATCTTTTTTTAATTTGTTG+GGG + Chr4:10707812-10707831 None:intergenic 20.0%
!!! TAATTTGAGTTAAGAGTTAA+AGG - Chr4:10706941-10706960 MsG0480018860.01.T01:intron 20.0%
! AAATAGAAAGAAAAGTAAGG+AGG - Chr4:10705958-10705977 MsG0480018860.01.T01:intron 25.0%
! AAATTATTGGACTTATGGAA+AGG + Chr4:10708171-10708190 None:intergenic 25.0%
! AACCTTAAAGGAAATAAGTT+GGG - Chr4:10706223-10706242 MsG0480018860.01.T01:intron 25.0%
! ACTACATATTATTATGGTAC+AGG - Chr4:10707651-10707670 MsG0480018860.01.T01:intron 25.0%
! ATAGAAAGTGATAAAACTCT+AGG + Chr4:10706108-10706127 None:intergenic 25.0%
! CAAATTAAAAAAAGATGTGG+TGG - Chr4:10707815-10707834 MsG0480018860.01.T01:intron 25.0%
! CATTTGTATGTATGTTATCT+TGG - Chr4:10707156-10707175 MsG0480018860.01.T01:intron 25.0%
! CTCAAATACATGTTATGATT+GGG - Chr4:10708227-10708246 MsG0480018860.01.T01:CDS 25.0%
! GATAGAGTACAATAGATTTA+AGG + Chr4:10706201-10706220 None:intergenic 25.0%
! TAACAATGTCCTATAATTTG+AGG - Chr4:10705779-10705798 MsG0480018860.01.T01:intron 25.0%
! TAATAAACAGCCTAAGAATT+TGG - Chr4:10704785-10704804 MsG0480018860.01.T01:intron 25.0%
! TAGTTATCGTTGTTATCAAA+CGG - Chr4:10707698-10707717 MsG0480018860.01.T01:intron 25.0%
! TCTCAAATACATGTTATGAT+TGG - Chr4:10708226-10708245 MsG0480018860.01.T01:CDS 25.0%
! TCTGATACATATTGAATTTC+AGG - Chr4:10706521-10706540 MsG0480018860.01.T01:intron 25.0%
! TGTTATGATAGTTTACTTAG+TGG - Chr4:10706665-10706684 MsG0480018860.01.T01:intron 25.0%
! TTCAAAATTGTATTTGTCAG+AGG + Chr4:10707255-10707274 None:intergenic 25.0%
!! TTTAAATGGGGTTTTTGTTA+AGG - Chr4:10704848-10704867 MsG0480018860.01.T01:intron 25.0%
!!! AAATTAGTTTGTCAGTTAGA+GGG + Chr4:10706425-10706444 None:intergenic 25.0%
!!! CAGTAATATAAAGGTTTTAG+AGG + Chr4:10705552-10705571 None:intergenic 25.0%
!!! TTCATAACTTGCTGTTTTTA+GGG - Chr4:10705865-10705884 MsG0480018860.01.T01:intron 25.0%
!!! TTTTTAGGGTAGTTTGTATT+TGG - Chr4:10705879-10705898 MsG0480018860.01.T01:intron 25.0%
!!! TTTTTTAAAAACTCGGTATC+CGG + Chr4:10705376-10705395 None:intergenic 25.0%
AAATACATGTTATGATTGGG+TGG - Chr4:10708230-10708249 MsG0480018860.01.T01:CDS 30.0%
AACAGCAAGTTATGAAGTTA+AGG + Chr4:10705861-10705880 None:intergenic 30.0%
AACGGTAGAATTAAAGATAG+AGG - Chr4:10707716-10707735 MsG0480018860.01.T01:intron 30.0%
AATACATGTTATGATTGGGT+GGG - Chr4:10708231-10708250 MsG0480018860.01.T01:CDS 30.0%
AATATAGTAGGAGGGAATAA+GGG - Chr4:10706030-10706049 MsG0480018860.01.T01:intron 30.0%
AATGATTCACATGGATTCTT+CGG + Chr4:10704645-10704664 None:intergenic 30.0%
ACAGAGAAACAGAATATAGT+AGG - Chr4:10706018-10706037 MsG0480018860.01.T01:intron 30.0%
ACGGTAGAATTAAAGATAGA+GGG - Chr4:10707717-10707736 MsG0480018860.01.T01:intron 30.0%
AGAAACAGAATATAGTAGGA+GGG - Chr4:10706022-10706041 MsG0480018860.01.T01:intron 30.0%
AGAGAAAGATTTATCCTTCA+AGG - Chr4:10706295-10706314 MsG0480018860.01.T01:intron 30.0%
ATGTTTGTAGAGTAAATCCT+TGG - Chr4:10705197-10705216 MsG0480018860.01.T01:CDS 30.0%
ATTCTTAGGCTGTTTATTAG+TGG + Chr4:10704784-10704803 None:intergenic 30.0%
CAATTGCAGCAGTAATATAA+AGG + Chr4:10705561-10705580 None:intergenic 30.0%
CATGTTATGAAACACATACA+CGG + Chr4:10705180-10705199 None:intergenic 30.0%
CCACTCACTACATATTATTA+TGG - Chr4:10707645-10707664 MsG0480018860.01.T01:intron 30.0%
CCATAATAATATGTAGTGAG+TGG + Chr4:10707648-10707667 None:intergenic 30.0%
GAACCTTAAAGGAAATAAGT+TGG - Chr4:10706222-10706241 MsG0480018860.01.T01:intron 30.0%
GAAGGATAAATCTTTCTCTT+TGG + Chr4:10706294-10706313 None:intergenic 30.0%
GAGAAAGATTTATCCTTCAA+GGG - Chr4:10706296-10706315 MsG0480018860.01.T01:intron 30.0%
GGTACACTAATAACTTTATG+TGG + Chr4:10706604-10706623 None:intergenic 30.0%
TAATAATATGTAGTGAGTGG+TGG + Chr4:10707645-10707664 None:intergenic 30.0%
TACCCAACTTATTTCCTTTA+AGG + Chr4:10706228-10706247 None:intergenic 30.0%
TGATAGGAGAACATTCATTA+AGG - Chr4:10705922-10705941 MsG0480018860.01.T01:intron 30.0%
TTAATGAATGTTCTCCTATC+AGG + Chr4:10705923-10705942 None:intergenic 30.0%
TTCAATGCAATCATAAGTGT+CGG + Chr4:10705094-10705113 None:intergenic 30.0%
TTCGAATGCTATACATATCT+TGG - Chr4:10708341-10708360 MsG0480018860.01.T01:CDS 30.0%
TTCTTAGGCTGTTTATTAGT+GGG + Chr4:10704783-10704802 None:intergenic 30.0%
TTCTTGCATAATGATTCACA+TGG + Chr4:10704654-10704673 None:intergenic 30.0%
! AATAAGGGATGTAACTTGTA+AGG + Chr4:10706385-10706404 None:intergenic 30.0%
! CTCGTTTTACTACAATATCA+AGG + Chr4:10705477-10705496 None:intergenic 30.0%
! GTATTGCTGATGCTTTAAAT+GGG - Chr4:10704835-10704854 MsG0480018860.01.T01:intron 30.0%
! TATTGCTGATGCTTTAAATG+GGG - Chr4:10704836-10704855 MsG0480018860.01.T01:intron 30.0%
! TCAAAATTTACACTGACTAG+TGG - Chr4:10708481-10708500 MsG0480018860.01.T01:CDS 30.0%
! TGGAAGCATAAATAAAGATG+AGG + Chr4:10706584-10706603 None:intergenic 30.0%
! TTCTGATTTGAGTCAATTAG+AGG - Chr4:10704962-10704981 MsG0480018860.01.T01:CDS 30.0%
! TTGTTGTTGATCATTGTTCT+GGG + Chr4:10704505-10704524 None:intergenic 30.0%
!! AATTAGTTTGTCAGTTAGAG+GGG + Chr4:10706424-10706443 None:intergenic 30.0%
!! CAGTGTAAATTTTGATGTCA+AGG + Chr4:10708476-10708495 None:intergenic 30.0%
!! GAAATTAGTTTGTCAGTTAG+AGG + Chr4:10706426-10706445 None:intergenic 30.0%
!!! CTTCATAACTTGCTGTTTTT+AGG - Chr4:10705864-10705883 MsG0480018860.01.T01:intron 30.0%
AAATATTAGGATCAACCCTC+TGG + Chr4:10706149-10706168 None:intergenic 35.0%
AAATCAAGAGGTAAGAATCC+TGG + Chr4:10708420-10708439 None:intergenic 35.0%
AAATTAGTAGGTCCTTGAAC+CGG - Chr4:10705354-10705373 MsG0480018860.01.T01:CDS 35.0%
AACAACATTTGTTTGCAGAC+AGG + Chr4:10704618-10704637 None:intergenic 35.0%
AAGTTGGGTAAAAGAGAAGA+TGG - Chr4:10706238-10706257 MsG0480018860.01.T01:intron 35.0%
ACAACATTTGTTTGCAGACA+GGG + Chr4:10704617-10704636 None:intergenic 35.0%
ACACTGTTATTGTTACCGTT+TGG - Chr4:10707059-10707078 MsG0480018860.01.T01:intron 35.0%
ACCATCCAAAACCTTTACAA+TGG + Chr4:10707469-10707488 None:intergenic 35.0%
AGATGAGGTGAATGAAGATA+AGG + Chr4:10706569-10706588 None:intergenic 35.0%
AGATTTAAGGGCAATTGCAA+CGG + Chr4:10706188-10706207 None:intergenic 35.0%
AGCTTCCTTACAATACCATT+AGG - Chr4:10707441-10707460 MsG0480018860.01.T01:intron 35.0%
ATACATGTTATGATTGGGTG+GGG - Chr4:10708232-10708251 MsG0480018860.01.T01:CDS 35.0%
ATCTGTACATCAAAAGGACA+GGG + Chr4:10707195-10707214 None:intergenic 35.0%
ATGTACATGAGGAATGTTGA+GGG + Chr4:10707622-10707641 None:intergenic 35.0%
ATTGTTCACGATTGTGGTTA+CGG - Chr4:10705445-10705464 MsG0480018860.01.T01:CDS 35.0%
CAGAATAATGAGTGTGACAA+TGG + Chr4:10706505-10706524 None:intergenic 35.0%
CAGAATCTTGATTGTACTTG+TGG - Chr4:10704753-10704772 MsG0480018860.01.T01:intron 35.0%
CCTAACTGATATCATAAGCT+GGG - Chr4:10706456-10706475 MsG0480018860.01.T01:intron 35.0%
CCTAAGAATTTGGATTCTGA+GGG - Chr4:10704795-10704814 MsG0480018860.01.T01:intron 35.0%
CTGTCTATTAAGATTGTCAG+TGG + Chr4:10704378-10704397 None:intergenic 35.0%
CTTCACTTCAAGATCAACAA+GGG + Chr4:10707943-10707962 None:intergenic 35.0%
GAATATAGTAGGAGGGAATA+AGG - Chr4:10706029-10706048 MsG0480018860.01.T01:intron 35.0%
GAGAAACAGAATATAGTAGG+AGG - Chr4:10706021-10706040 MsG0480018860.01.T01:intron 35.0%
GCAATATTGGAACGGATATT+TGG + Chr4:10706749-10706768 None:intergenic 35.0%
GCATATGTTAAGAACCTGAT+AGG - Chr4:10705906-10705925 MsG0480018860.01.T01:intron 35.0%
GCTTCCTTACAATACCATTA+GGG - Chr4:10707442-10707461 MsG0480018860.01.T01:intron 35.0%
GTACTCTATCAGAACCTTAA+AGG - Chr4:10706211-10706230 MsG0480018860.01.T01:intron 35.0%
GTAGAATTAAAGATAGAGGG+AGG - Chr4:10707720-10707739 MsG0480018860.01.T01:intron 35.0%
TACGAAGAGCAATATTGGAA+CGG + Chr4:10706757-10706776 None:intergenic 35.0%
TAGTAAAACGAGTGTAATGC+AGG - Chr4:10705485-10705504 MsG0480018860.01.T01:CDS 35.0%
TATCAGATGCGTATCAGTAT+CGG + Chr4:10708138-10708157 None:intergenic 35.0%
TCAGAATCATCATCATTCCT+CGG - Chr4:10704534-10704553 MsG0480018860.01.T01:intron 35.0%
TCATATCATACTGTGTATCC+AGG - Chr4:10708399-10708418 MsG0480018860.01.T01:CDS 35.0%
TCCTAACTGATATCATAAGC+TGG - Chr4:10706455-10706474 MsG0480018860.01.T01:intron 35.0%
TCTCCTACACTATATAATGC+CGG + Chr4:10707855-10707874 None:intergenic 35.0%
TTCAACATGACACAGATATG+AGG + Chr4:10708378-10708397 None:intergenic 35.0%
TTCACTTCAAGATCAACAAG+GGG + Chr4:10707942-10707961 None:intergenic 35.0%
TTCAGCATCTGTACATCAAA+AGG + Chr4:10707201-10707220 None:intergenic 35.0%
TTGTAGAGTAAATCCTTGGA+GGG - Chr4:10705201-10705220 MsG0480018860.01.T01:CDS 35.0%
TTTGTAGAGTAAATCCTTGG+AGG - Chr4:10705200-10705219 MsG0480018860.01.T01:CDS 35.0%
! AAGTAAGGAGGTATATAGAG+CGG - Chr4:10705970-10705989 MsG0480018860.01.T01:intron 35.0%
! ATAGACTAGCCCACAAAAAT+TGG + Chr4:10705281-10705300 None:intergenic 35.0%
! ATGCAGATGTTGATGGAATT+GGG - Chr4:10704936-10704955 MsG0480018860.01.T01:CDS 35.0%
! GGGTTTTTGTTAAGGACAAT+GGG - Chr4:10704856-10704875 MsG0480018860.01.T01:intron 35.0%
! GGTATTGCTGATGCTTTAAA+TGG - Chr4:10704834-10704853 MsG0480018860.01.T01:intron 35.0%
! GTTGTTGTTGATCATTGTTC+TGG + Chr4:10704506-10704525 None:intergenic 35.0%
! TGAACATTGATGACACTGAA+TGG - Chr4:10704682-10704701 MsG0480018860.01.T01:intron 35.0%
! TTGGACTTATGGAAAGGTAT+TGG + Chr4:10708165-10708184 None:intergenic 35.0%
! TTGGATGGTAACTCTTTTGT+TGG - Chr4:10707480-10707499 MsG0480018860.01.T01:intron 35.0%
!! ATCGTTTTTGACTCTTCTTG+TGG + Chr4:10704354-10704373 None:intergenic 35.0%
!! TAACGTCCATTTTAATGTCG+CGG + Chr4:10707347-10707366 None:intergenic 35.0%
!! TGGACTTATGGAAAGGTATT+GGG + Chr4:10708164-10708183 None:intergenic 35.0%
!! TTAATTTGTTGGGGGATCTT+GGG + Chr4:10707803-10707822 None:intergenic 35.0%
!! TTTAATTTGTTGGGGGATCT+TGG + Chr4:10707804-10707823 None:intergenic 35.0%
!!! GGACAATGGGTTTTTGTTTT+TGG - Chr4:10704869-10704888 MsG0480018860.01.T01:intron 35.0%
!!! TCCATTGTAAAGGTTTTGGA+TGG - Chr4:10707465-10707484 MsG0480018860.01.T01:intron 35.0%
ACCATTAGGGTCCATTGTAA+AGG - Chr4:10707455-10707474 MsG0480018860.01.T01:intron 40.0%
ACCTTTACAATGGACCCTAA+TGG + Chr4:10707459-10707478 None:intergenic 40.0%
AGACCGGCATTATATAGTGT+AGG - Chr4:10707849-10707868 MsG0480018860.01.T01:intron 40.0%
AGGCAAGAATTAGCAGAAAG+TGG + Chr4:10707894-10707913 None:intergenic 40.0%
ATGGAAGTCACCAAAGAACT+TGG + Chr4:10704918-10704937 None:intergenic 40.0%
CAATTCCATCAACATCTGCA+TGG + Chr4:10704937-10704956 None:intergenic 40.0%
CAATTGCAACGGGAATTGAT+GGG + Chr4:10706177-10706196 None:intergenic 40.0%
CATCTGTACATCAAAAGGAC+AGG + Chr4:10707196-10707215 None:intergenic 40.0%
CATTGGAAAACAGGAGGTAA+TGG - Chr4:10704998-10705017 MsG0480018860.01.T01:CDS 40.0%
CCCAGCTTATGATATCAGTT+AGG + Chr4:10706459-10706478 None:intergenic 40.0%
CCCTCAGAATCCAAATTCTT+AGG + Chr4:10704798-10704817 None:intergenic 40.0%
CCTGCAAATTGCAAATCAAG+AGG + Chr4:10708432-10708451 None:intergenic 40.0%
CCTTCACTTCAAGATCAACA+AGG + Chr4:10707944-10707963 None:intergenic 40.0%
CCTTGTTGATCTTGAAGTGA+AGG - Chr4:10707941-10707960 MsG0480018860.01.T01:CDS 40.0%
CTATGCTTCATAGACCACAT+GGG + Chr4:10708075-10708094 None:intergenic 40.0%
CTTGCTACGAAGAGCAATAT+TGG + Chr4:10706762-10706781 None:intergenic 40.0%
GAAGATTGTGCCAAGTTCTT+TGG - Chr4:10704905-10704924 MsG0480018860.01.T01:CDS 40.0%
GAAGTCAACAAAGTTTCCAC+AGG + Chr4:10707415-10707434 None:intergenic 40.0%
GAAGTGAAGGTGATAAGCAT+TGG - Chr4:10707954-10707973 MsG0480018860.01.T01:CDS 40.0%
GATGTACATGAGGAATGTTG+AGG + Chr4:10707623-10707642 None:intergenic 40.0%
GATTTAAGGGCAATTGCAAC+GGG + Chr4:10706187-10706206 None:intergenic 40.0%
GCCTAAGAATTTGGATTCTG+AGG - Chr4:10704794-10704813 MsG0480018860.01.T01:intron 40.0%
GGTTCAAGGACCTACTAATT+TGG + Chr4:10705355-10705374 None:intergenic 40.0%
GGTTTGGACAATCAAAGTGT+GGG + Chr4:10707596-10707615 None:intergenic 40.0%
GTAACCACAATCGTGAACAA+TGG + Chr4:10705446-10705465 None:intergenic 40.0%
GTTTGGACAATCAAAGTGTG+GGG + Chr4:10707595-10707614 None:intergenic 40.0%
TACATGTTATGATTGGGTGG+GGG - Chr4:10708233-10708252 MsG0480018860.01.T01:CDS 40.0%
TAGTAGCAAGTGGAAGAGAA+AGG + Chr4:10704464-10704483 None:intergenic 40.0%
TATTGCTCTTCGTAGCAAGT+TGG - Chr4:10706763-10706782 MsG0480018860.01.T01:intron 40.0%
TCATAAGCTGGGTGATCTAT+TGG - Chr4:10706467-10706486 MsG0480018860.01.T01:intron 40.0%
TCTATGCTTCATAGACCACA+TGG + Chr4:10708076-10708095 None:intergenic 40.0%
TCTGATCCTATTGATCCAGA+GGG - Chr4:10706131-10706150 MsG0480018860.01.T01:intron 40.0%
TGAACCATTGTTCACGATTG+TGG - Chr4:10705439-10705458 MsG0480018860.01.T01:CDS 40.0%
TGGACCCTAATGGTATTGTA+AGG + Chr4:10707449-10707468 None:intergenic 40.0%
TGTACATGAGGAATGTTGAG+GGG + Chr4:10707621-10707640 None:intergenic 40.0%
TGTAGAGTAAATCCTTGGAG+GGG - Chr4:10705202-10705221 MsG0480018860.01.T01:CDS 40.0%
! AATTTGGATTCTGAGGGTCA+GGG - Chr4:10704801-10704820 MsG0480018860.01.T01:intron 40.0%
! AGGGTCCATTGTAAAGGTTT+TGG - Chr4:10707461-10707480 MsG0480018860.01.T01:intron 40.0%
! ATCATCCCTGCCAATTTTTG+TGG - Chr4:10705268-10705287 MsG0480018860.01.T01:CDS 40.0%
! ATTTACACTGACTAGTGGAC+TGG - Chr4:10708486-10708505 MsG0480018860.01.T01:CDS 40.0%
! CATGCAGATGTTGATGGAAT+TGG - Chr4:10704935-10704954 MsG0480018860.01.T01:CDS 40.0%
! GAGGAATGATGATGATTCTG+AGG + Chr4:10704535-10704554 None:intergenic 40.0%
! GGGGTTTTTGTTAAGGACAA+TGG - Chr4:10704855-10704874 MsG0480018860.01.T01:intron 40.0%
! TCATCCCTGCCAATTTTTGT+GGG - Chr4:10705269-10705288 MsG0480018860.01.T01:CDS 40.0%
! TGCAGATGTTGATGGAATTG+GGG - Chr4:10704937-10704956 MsG0480018860.01.T01:CDS 40.0%
! TGGTTTGGACAATCAAAGTG+TGG + Chr4:10707597-10707616 None:intergenic 40.0%
! TTGTTGATCATTGTTCTGGG+TGG + Chr4:10704502-10704521 None:intergenic 40.0%
!! AACGTCCATTTTAATGTCGC+GGG + Chr4:10707346-10707365 None:intergenic 40.0%
!! ACTTATGGAAAGGTATTGGG+GGG + Chr4:10708161-10708180 None:intergenic 40.0%
!! CCTCTTGATTTGCAATTTGC+AGG - Chr4:10708429-10708448 MsG0480018860.01.T01:CDS 40.0%
!! GACTTATGGAAAGGTATTGG+GGG + Chr4:10708162-10708181 None:intergenic 40.0%
!! GGACTTATGGAAAGGTATTG+GGG + Chr4:10708163-10708182 None:intergenic 40.0%
!! GGTTGGTCTTCCAAATTAGT+AGG - Chr4:10705342-10705361 MsG0480018860.01.T01:CDS 40.0%
!! GGTTTTGTACGCTTTCATAG+AGG + Chr4:10704572-10704591 None:intergenic 40.0%
!! GTGTGTGTGTGTTTTGGATA+GGG + Chr4:10707025-10707044 None:intergenic 40.0%
!! TATACAGCTCTGGCTTTAGT+TGG - Chr4:10705298-10705317 MsG0480018860.01.T01:CDS 40.0%
!! TGTGTGTGTGTGTTTTGGAT+AGG + Chr4:10707026-10707045 None:intergenic 40.0%
AAAACTCGGTATCCGGTTCA+AGG + Chr4:10705369-10705388 None:intergenic 45.0%
ACAGGGTTCCAAACAACGTT+TGG + Chr4:10704600-10704619 None:intergenic 45.0%
ACCTCACTCCAAACGTTGTT+TGG - Chr4:10704589-10704608 MsG0480018860.01.T01:intron 45.0%
ACGCAACATTGGAAAACAGG+AGG - Chr4:10704992-10705011 MsG0480018860.01.T01:CDS 45.0%
ACTAGCCCACAAAAATTGGC+AGG + Chr4:10705277-10705296 None:intergenic 45.0%
ACTGCTGATGCAAACTGGTT+TGG + Chr4:10707306-10707325 None:intergenic 45.0%
AGAGAGAGTCATGTCCAAGT+GGG + Chr4:10706324-10706343 None:intergenic 45.0%
AGCAAACGCCTTGACTGAAA+TGG - Chr4:10707776-10707795 MsG0480018860.01.T01:intron 45.0%
AGGCGAATGATAGTAGCAAG+TGG + Chr4:10704474-10704493 None:intergenic 45.0%
AGGTTAAGGTGTACTTGAGG+AGG + Chr4:10707224-10707243 None:intergenic 45.0%
ATAATCTGTGCAGAAGCCTG+TGG - Chr4:10707396-10707415 MsG0480018860.01.T01:intron 45.0%
ATCGTCGTTCGTTTCAGTCT+AGG - Chr4:10705615-10705634 MsG0480018860.01.T01:CDS 45.0%
ATTTGTCAGAGGCTCATGAG+AGG + Chr4:10707244-10707263 None:intergenic 45.0%
CACACGCAACATTGGAAAAC+AGG - Chr4:10704989-10705008 MsG0480018860.01.T01:CDS 45.0%
CTAGCCCACAAAAATTGGCA+GGG + Chr4:10705276-10705295 None:intergenic 45.0%
CTCTGATCCTATTGATCCAG+AGG - Chr4:10706130-10706149 MsG0480018860.01.T01:intron 45.0%
CTCTGGATCAATAGGATCAG+AGG + Chr4:10706132-10706151 None:intergenic 45.0%
CTTCAAGATCAACAAGGGGA+AGG + Chr4:10707938-10707957 None:intergenic 45.0%
CTTGAAGTGTGCTTCTCTCA+AGG - Chr4:10705233-10705252 MsG0480018860.01.T01:CDS 45.0%
CTTTGACTGCTGATGCAAAC+TGG + Chr4:10707311-10707330 None:intergenic 45.0%
GACACCAGGATTGAGTAACA+TGG + Chr4:10707571-10707590 None:intergenic 45.0%
GACATGAGTCAGAAGCTCTT+GGG + Chr4:10706882-10706901 None:intergenic 45.0%
GACTTCCATGCAGATGTTGA+TGG - Chr4:10704929-10704948 MsG0480018860.01.T01:CDS 45.0%
GAGACACTGATCAGACTTGT+TGG + Chr4:10706359-10706378 None:intergenic 45.0%
GAGAGGTTAAGGTGTACTTG+AGG + Chr4:10707227-10707246 None:intergenic 45.0%
GATCAACCCTCTGGATCAAT+AGG + Chr4:10706140-10706159 None:intergenic 45.0%
GCAATTGCAACGGGAATTGA+TGG + Chr4:10706178-10706197 None:intergenic 45.0%
GCTACTCTGATGAGTGGTAA+AGG + Chr4:10706906-10706925 None:intergenic 45.0%
GGAGTGATTTCTAAGTCGCA+TGG - Chr4:10707741-10707760 MsG0480018860.01.T01:intron 45.0%
TATCGCAACTGCAATTGCGT+TGG + Chr4:10705517-10705536 None:intergenic 45.0%
TCGTCGTTCGTTTCAGTCTA+GGG - Chr4:10705616-10705635 MsG0480018860.01.T01:CDS 45.0%
TCTTGGGTCCATTTCAGTCA+AGG + Chr4:10707787-10707806 None:intergenic 45.0%
TGACATGAGTCAGAAGCTCT+TGG + Chr4:10706883-10706902 None:intergenic 45.0%
TGTCAGACACTATGACGTGT+AGG + Chr4:10705071-10705090 None:intergenic 45.0%
TTCAGGTGTTCAACACAAGC+AGG - Chr4:10706538-10706557 MsG0480018860.01.T01:intron 45.0%
TTGATGTCAAGGAAGCTGCA+AGG + Chr4:10708465-10708484 None:intergenic 45.0%
TTGCACCCGCGACATTAAAA+TGG - Chr4:10707338-10707357 MsG0480018860.01.T01:intron 45.0%
TTGCCGAGCTAAGTAAGAAC+CGG - Chr4:10706055-10706074 MsG0480018860.01.T01:intron 45.0%
! AGAGGTTTTTGATGCTTCCG+AGG + Chr4:10704554-10704573 None:intergenic 45.0%
! AGTAAGAACCGGGAGAGTTT+TGG - Chr4:10706066-10706085 MsG0480018860.01.T01:intron 45.0%
! ATTTGGATTCTGAGGGTCAG+GGG - Chr4:10704802-10704821 MsG0480018860.01.T01:intron 45.0%
! CATTGTTCTGGGTGGTTAAG+AGG + Chr4:10704494-10704513 None:intergenic 45.0%
! GAATTTGGATTCTGAGGGTC+AGG - Chr4:10704800-10704819 MsG0480018860.01.T01:intron 45.0%
! GTAAGAACCGGGAGAGTTTT+GGG - Chr4:10706067-10706086 MsG0480018860.01.T01:intron 45.0%
! GTACAAGAGTGTAGAGAGCT+TGG - Chr4:10707518-10707537 MsG0480018860.01.T01:intron 45.0%
! GTGTGTGTGTGTGTGTGTTT+TGG + Chr4:10707031-10707050 None:intergenic 45.0%
! TAAGAACCGGGAGAGTTTTG+GGG - Chr4:10706068-10706087 MsG0480018860.01.T01:intron 45.0%
! TACTGCTGCAATTGCTGTTG+CGG - Chr4:10705567-10705586 MsG0480018860.01.T01:CDS 45.0%
! TCCAAACAACGTTTGGAGTG+AGG + Chr4:10704593-10704612 None:intergenic 45.0%
!! GAGAGTGTCAACGAAGTCTT+TGG + Chr4:10704433-10704452 None:intergenic 45.0%
!! GATAAGCATTGGTGAAGCTG+AGG - Chr4:10707965-10707984 MsG0480018860.01.T01:CDS 45.0%
!! TAAAGAATTAATAAAATTAT+TGG + Chr4:10708184-10708203 None:intergenic 5.0%
!!! TTATTTTCTTAAAATTTTAT+CGG - Chr4:10705119-10705138 MsG0480018860.01.T01:CDS 5.0%
AGTAAATCCTTGGAGGGGCT+TGG - Chr4:10705207-10705226 MsG0480018860.01.T01:CDS 50.0%
ATGTCAAGGAAGCTGCAAGG+AGG + Chr4:10708462-10708481 None:intergenic 50.0%
CACCAGATACGACACTGACA+TGG + Chr4:10705156-10705175 None:intergenic 50.0%
CAGAGAGAGTCATGTCCAAG+TGG + Chr4:10706325-10706344 None:intergenic 50.0%
CAGAGGCTCATGAGAGGTTA+AGG + Chr4:10707238-10707257 None:intergenic 50.0%
CGCAATGCTACTCTGATGAG+TGG + Chr4:10706912-10706931 None:intergenic 50.0%
CGCTCCATGTTACTCAATCC+TGG - Chr4:10707564-10707583 MsG0480018860.01.T01:intron 50.0%
CTCCCGGTTCTTACTTAGCT+CGG + Chr4:10706061-10706080 None:intergenic 50.0%
CTTCATAGACCACATGGGAG+GGG + Chr4:10708070-10708089 None:intergenic 50.0%
GAGGAAGTCACACGCAACAT+TGG - Chr4:10704981-10705000 MsG0480018860.01.T01:CDS 50.0%
GCAGGGATGATTCGAATGTG+AGG + Chr4:10705259-10705278 None:intergenic 50.0%
GCTTCATAGACCACATGGGA+GGG + Chr4:10708071-10708090 None:intergenic 50.0%
GGTGGGATTTGTGAAGAGAC+CGG - Chr4:10707833-10707852 MsG0480018860.01.T01:intron 50.0%
GTAAATCCTTGGAGGGGCTT+GGG - Chr4:10705208-10705227 MsG0480018860.01.T01:CDS 50.0%
GTCCATGTCAGTGTCGTATC+TGG - Chr4:10705151-10705170 MsG0480018860.01.T01:CDS 50.0%
TAGAGAGCTTGGACTCTTCG+TGG - Chr4:10707529-10707548 MsG0480018860.01.T01:intron 50.0%
TGCCGAGCTAAGTAAGAACC+GGG - Chr4:10706056-10706075 MsG0480018860.01.T01:intron 50.0%
TGCTTCATAGACCACATGGG+AGG + Chr4:10708072-10708091 None:intergenic 50.0%
TTCATAGACCACATGGGAGG+GGG + Chr4:10708069-10708088 None:intergenic 50.0%
! AAAGTGCCCCAAAACTCTCC+CGG + Chr4:10706077-10706096 None:intergenic 50.0%
!! CTGATGCAAACTGGTTTGGC+GGG + Chr4:10707302-10707321 None:intergenic 50.0%
!! GCTGATGCAAACTGGTTTGG+CGG + Chr4:10707303-10707322 None:intergenic 50.0%
!! GTGAGTGGTGGATGTACATG+AGG + Chr4:10707633-10707652 None:intergenic 50.0%
!! TGGCGGGTTGTCTTTGTTCT+TGG + Chr4:10707286-10707305 None:intergenic 50.0%
!! TGGGCTAGTCTATACAGCTC+TGG - Chr4:10705288-10705307 MsG0480018860.01.T01:CDS 50.0%
ACATGGGAGGGGGATCAAAG+AGG + Chr4:10708059-10708078 None:intergenic 55.0%
ATCCTTCAAGGGCTCCCACT+TGG - Chr4:10706307-10706326 MsG0480018860.01.T01:intron 55.0%
CATGAGGAATGTTGAGGGGC+TGG + Chr4:10707617-10707636 None:intergenic 55.0%
TCTGAGGGTCAGGGGAATAG+TGG - Chr4:10704810-10704829 MsG0480018860.01.T01:intron 55.0%
TCTTTGATCCCCCTCCCATG+TGG - Chr4:10708058-10708077 MsG0480018860.01.T01:CDS 55.0%
!! GGAATGTTGAGGGGCTGGTT+TGG + Chr4:10707612-10707631 None:intergenic 55.0%
AACCGCGCTGTCTACTCGTG+GGG + Chr4:10705326-10705345 None:intergenic 60.0%
CAACCGCGCTGTCTACTCGT+GGG + Chr4:10705327-10705346 None:intergenic 60.0%
CAAGATCCCAAGCCCCTCCA+AGG + Chr4:10705217-10705236 None:intergenic 60.0%
GAGGGTCAGGGGAATAGTGG+TGG - Chr4:10704813-10704832 MsG0480018860.01.T01:intron 60.0%
GTCCAAGTGGGAGCCCTTGA+AGG + Chr4:10706312-10706331 None:intergenic 60.0%
TCAAAGTGTGGGGCGACACC+AGG + Chr4:10707585-10707604 None:intergenic 60.0%
AGCCCCACGAGTAGACAGCG+CGG - Chr4:10705321-10705340 MsG0480018860.01.T01:CDS 65.0%
CCAACCGCGCTGTCTACTCG+TGG + Chr4:10705328-10705347 None:intergenic 65.0%
CCACGAGTAGACAGCGCGGT+TGG - Chr4:10705325-10705344 MsG0480018860.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 10704336 10708555 10704336 ID=MsG0480018860.01;Name=MsG0480018860.01
Chr4 mRNA 10704336 10708555 10704336 ID=MsG0480018860.01.T01;Parent=MsG0480018860.01;Name=MsG0480018860.01.T01;_AED=0.33;_eAED=0.35;_QI=0|0|0|1|0|0.33|3|0|528
Chr4 exon 10707878 10708555 10707878 ID=MsG0480018860.01.T01:exon:3610;Parent=MsG0480018860.01.T01
Chr4 exon 10704905 10705678 10704905 ID=MsG0480018860.01.T01:exon:3609;Parent=MsG0480018860.01.T01
Chr4 exon 10704336 10704470 10704336 ID=MsG0480018860.01.T01:exon:3608;Parent=MsG0480018860.01.T01
Chr4 CDS 10707878 10708555 10707878 ID=MsG0480018860.01.T01:cds;Parent=MsG0480018860.01.T01
Chr4 CDS 10704905 10705678 10704905 ID=MsG0480018860.01.T01:cds;Parent=MsG0480018860.01.T01
Chr4 CDS 10704336 10704470 10704336 ID=MsG0480018860.01.T01:cds;Parent=MsG0480018860.01.T01
Gene Sequence

>MsG0480018860.01.T01

ATGGCTTCTGAAGAACCACAAGAAGAGTCAAAAACGATTCCACTGACAATCTTAATAGACAGAGAAAACAACAAAGTTGTCGCTGTTGAATCAACCAAAGACTTCGTTGACACTCTCTTCAGCTTCCTTTCTCTTCCACTTGCTACTATCATTCGCCTCTTAACCACCCAGAACAATGATCAACAACAACAAGAATCCTCAGAATCATCATCATTCCTCGGAAGCATCAAAAACCTCTATGAAAGCGTACAAAACCTCACTCCAAACGTTGTTTGGAACCCTGTCTGCAAACAAATGTTGTTGAATCCGAAGAATCCATGTGAATCATTATGCAAGAAGCTTTTCTTGAACATTGATGACACTGAATGGTCAAGTAAGTTTTTCGTGTGTGATGCTTGTAACAATTTTACAACTTTTCAGAATCTTGATTGTACTTGTGGAAAACCCACTAATAAACAGCCTAAGAATTTGGATTCTGAGGGTCAGGGGAATAGTGGTGGTATTGCTGATGCTTTAAATGGGGTTTTTGTTAAGGACAATGGGTTTTTGTTTTTGGTGTATGATGATTTGAAGATTGTGCCAAGTTCTTTGGTGACTTCCATGCAGATGTTGATGGAATTGGGGTATTCTGATTTGAGTCAATTAGAGGAAGTCACACGCAACATTGGAAAACAGGAGATGCTGAACCTCCTCAAGTACACCTTAACCTCTCATGAGCCTCTGACAAATACAATTTTGAAAAGCAGCTCCAAGAACAAAGACAACCCGCCAAACCAGTTTGCATCAGCAGTCAAAGTAAAAACTTGCACCCGCGACATTAAAATGGACGTTAAGCTAGTGCAAAGTAAATCTCAGAAAAAGATAATCTGTGCAGAAGCCTGTGGAAACTTTGTTGACTTCATGTTTAGCTTCCTTACAATACCATTAGGGTCCATTGTAAAGGTTTTGGATGGTAACTCTTTTGTTGGATGTGTTGATAATTTGTACAAGAGTGTAGAGAGCTTGGACTCTTCGTGGTGTACAAACTCGCGCTCCATGTTACTCAATCCTGGTGTCGCCCCACACTTTGATTGTCCAAACCAGCCCCTCAACATTCCTCATGTACATCCACCACTCACTACATATTATTATGGTACAGGAACATCAAAGCAAGAGTATAATTATAGTTATCGTTGTTATCAAACGGTAGAATTAAAGATAGAGGGAGGAGTGATTTCTAAGTCGCATGGATTGATTTATAAAGCAAACGCCTTGACTGAAATGGACCCAAGATCCCCCAACAAATTAAAAAAAGATGTGGTGGGATTTGTGAAGAGACCGGCATTATATAGTGTAGGAGATGATCTAAAAGTAAAACCACTTTCTGCTAATTCTTGCCTTTCATATTTGAAAGAATTAAACCTTCCCCTTGTTGATCTTGAAGTGAAGGTGATAAGCATTGGTGAAGCTGAGGATTCTTACCTCTTGATTTGCAATTTGCAGGCTTTGAGCCTCCTTGCAGCTTCCTTGACATCAAAATTTACACTGACTAGTGGACTGGAAGAATTTTTTAACGAGCAAAAAGACCTCAAAGTGTGTTCAAACTAG
Protein sequence

>MsG0480018860.01.T01

MASEEPQEESKTIPLTILIDRENNKVVAVESTKDFVDTLFSFLSLPLATIIRLLTTQNNDQQQQESSESSSFLGSIKNLYESVQNLTPNVVWNPVCKQMLLNPKNPCESLCKKLFLNIDDTEWSSKFFVCDACNNFTTFQNLDCTCGKPTNKQPKNLDSEGQGNSGGIADALNGVFVKDNGFLFLVYDDLKIVPSSLVTSMQMLMELGYSDLSQLEEVTRNIGKQEMLNLLKYTLTSHEPLTNTILKSSSKNKDNPPNQFASAVKVKTCTRDIKMDVKLVQSKSQKKIICAEACGNFVDFMFSFLTIPLGSIVKVLDGNSFVGCVDNLYKSVESLDSSWCTNSRSMLLNPGVAPHFDCPNQPLNIPHVHPPLTTYYYGTGTSKQEYNYSYRCYQTVELKIEGGVISKSHGLIYKANALTEMDPRSPNKLKKDVVGFVKRPALYSVGDDLKVKPLSANSCLSYLKELNLPLVDLEVKVISIGEAEDSYLLICNLQALSLLAASLTSKFTLTSGLEEFFNEQKDLKVCSN*