Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018735.01.T01 | AES86963.2 | 75.63 | 476 | 80 | 5 | 23 | 470 | 3 | 470 | 0 | 693 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018735.01.T01 | G7JQ87 | 75.630 | 476 | 80 | 5 | 23 | 470 | 3 | 470 | 0.0 | 693 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018735.01.T01 | MTR_4g017550 | 75.630 | 476 | 80 | 5 | 23 | 470 | 3 | 470 | 0.0 | 693 |
MsG0480018735.01.T01 | MTR_4g017410 | 66.976 | 539 | 111 | 10 | 1 | 505 | 1 | 506 | 0.0 | 656 |
MsG0480018735.01.T01 | MTR_4g017440 | 63.178 | 516 | 136 | 10 | 3 | 479 | 8 | 508 | 0.0 | 584 |
MsG0480018735.01.T01 | MTR_4g017830 | 61.122 | 517 | 152 | 10 | 3 | 482 | 6 | 510 | 0.0 | 581 |
MsG0480018735.01.T01 | MTR_4g017470 | 60.681 | 529 | 129 | 10 | 1 | 491 | 1 | 488 | 0.0 | 556 |
MsG0480018735.01.T01 | MTR_4g017610 | 59.919 | 494 | 140 | 10 | 4 | 467 | 8 | 473 | 0.0 | 545 |
MsG0480018735.01.T01 | MTR_4g019340 | 60.120 | 499 | 124 | 11 | 8 | 463 | 37 | 503 | 0.0 | 528 |
MsG0480018735.01.T01 | MTR_4g019310 | 39.354 | 526 | 247 | 17 | 1 | 481 | 1 | 499 | 7.86e-97 | 302 |
MsG0480018735.01.T01 | MTR_7g066350 | 32.258 | 496 | 234 | 13 | 1 | 457 | 1 | 433 | 1.68e-68 | 227 |
MsG0480018735.01.T01 | MTR_7g066570 | 33.270 | 529 | 277 | 19 | 3 | 490 | 8 | 501 | 9.60e-66 | 223 |
MsG0480018735.01.T01 | MTR_7g066260 | 33.528 | 513 | 234 | 17 | 3 | 470 | 9 | 459 | 2.21e-64 | 217 |
MsG0480018735.01.T01 | MTR_7g066410 | 31.776 | 535 | 263 | 16 | 10 | 474 | 11 | 513 | 8.32e-64 | 216 |
MsG0480018735.01.T01 | MTR_7g066340 | 30.056 | 539 | 268 | 13 | 2 | 499 | 5 | 475 | 1.24e-63 | 214 |
MsG0480018735.01.T01 | MTR_7g012680 | 33.401 | 494 | 262 | 18 | 3 | 479 | 8 | 451 | 1.40e-60 | 206 |
MsG0480018735.01.T01 | MTR_7g058710 | 29.002 | 531 | 277 | 15 | 1 | 479 | 1 | 483 | 1.54e-59 | 204 |
MsG0480018735.01.T01 | MTR_7g063900 | 32.948 | 519 | 267 | 16 | 1 | 474 | 1 | 483 | 6.10e-57 | 197 |
MsG0480018735.01.T01 | MTR_7g066360 | 33.457 | 538 | 250 | 23 | 3 | 499 | 8 | 478 | 1.14e-55 | 194 |
MsG0480018735.01.T01 | MTR_7g066430 | 31.549 | 523 | 279 | 16 | 10 | 485 | 5 | 495 | 1.51e-55 | 194 |
MsG0480018735.01.T01 | MTR_7g066580 | 32.353 | 476 | 250 | 16 | 15 | 461 | 1 | 433 | 5.20e-53 | 186 |
MsG0480018735.01.T01 | MTR_1g041315 | 28.343 | 501 | 252 | 17 | 5 | 457 | 10 | 451 | 7.88e-53 | 186 |
MsG0480018735.01.T01 | MTR_7g066400 | 29.472 | 492 | 244 | 16 | 10 | 469 | 13 | 433 | 1.28e-50 | 179 |
MsG0480018735.01.T01 | MTR_7g063660 | 30.368 | 517 | 282 | 16 | 1 | 479 | 1 | 477 | 5.42e-50 | 178 |
MsG0480018735.01.T01 | MTR_7g066310 | 29.297 | 512 | 230 | 16 | 8 | 499 | 6 | 405 | 7.01e-49 | 173 |
MsG0480018735.01.T01 | MTR_7g062280 | 30.075 | 532 | 275 | 13 | 2 | 479 | 3 | 491 | 8.97e-49 | 175 |
MsG0480018735.01.T01 | MTR_7g066290 | 35.598 | 368 | 178 | 13 | 3 | 326 | 9 | 361 | 6.47e-48 | 171 |
MsG0480018735.01.T01 | MTR_7g062300 | 30.118 | 508 | 270 | 14 | 3 | 469 | 6 | 469 | 8.39e-48 | 172 |
MsG0480018735.01.T01 | MTR_7g063890 | 31.226 | 522 | 282 | 15 | 1 | 480 | 19 | 505 | 2.98e-47 | 171 |
MsG0480018735.01.T01 | MTR_7g063840 | 28.988 | 514 | 282 | 13 | 4 | 479 | 5 | 473 | 1.48e-45 | 166 |
MsG0480018735.01.T01 | MTR_4g019240 | 70.874 | 103 | 29 | 1 | 4 | 106 | 8 | 109 | 7.12e-45 | 156 |
MsG0480018735.01.T01 | MTR_4g019240 | 66.667 | 51 | 17 | 0 | 432 | 482 | 113 | 163 | 7.65e-13 | 67.4 |
MsG0480018735.01.T01 | MTR_7g063920 | 28.427 | 496 | 272 | 10 | 3 | 479 | 5 | 436 | 4.24e-44 | 161 |
MsG0480018735.01.T01 | MTR_2g029400 | 29.072 | 485 | 233 | 14 | 1 | 461 | 6 | 403 | 1.33e-43 | 159 |
MsG0480018735.01.T01 | MTR_7g063880 | 29.502 | 522 | 265 | 21 | 3 | 479 | 5 | 468 | 1.40e-43 | 160 |
MsG0480018735.01.T01 | MTR_7g063820 | 30.857 | 525 | 276 | 18 | 1 | 479 | 1 | 484 | 2.54e-41 | 155 |
MsG0480018735.01.T01 | MTR_7g066480 | 35.000 | 320 | 173 | 11 | 10 | 304 | 17 | 326 | 1.78e-35 | 137 |
MsG0480018735.01.T01 | MTR_7g063830 | 29.921 | 381 | 205 | 12 | 1 | 339 | 1 | 361 | 2.64e-35 | 137 |
MsG0480018735.01.T01 | MTR_7g058700 | 30.704 | 355 | 142 | 12 | 21 | 318 | 531 | 838 | 9.46e-35 | 139 |
MsG0480018735.01.T01 | MTR_3g065200 | 27.755 | 490 | 244 | 18 | 10 | 467 | 4 | 415 | 1.21e-32 | 130 |
MsG0480018735.01.T01 | MTR_7g063670 | 27.148 | 512 | 269 | 16 | 6 | 479 | 12 | 457 | 3.39e-32 | 129 |
MsG0480018735.01.T01 | MTR_7g066490 | 31.190 | 311 | 181 | 9 | 10 | 303 | 17 | 311 | 8.80e-32 | 127 |
MsG0480018735.01.T01 | MTR_3g007740 | 27.237 | 503 | 277 | 15 | 1 | 474 | 1 | 443 | 7.20e-31 | 124 |
MsG0480018735.01.T01 | MTR_7g066280 | 25.349 | 430 | 276 | 14 | 97 | 499 | 1 | 412 | 1.70e-23 | 103 |
MsG0480018735.01.T01 | MTR_7g066680 | 31.071 | 280 | 148 | 9 | 190 | 453 | 37 | 287 | 3.17e-23 | 101 |
MsG0480018735.01.T01 | MTR_1g014060 | 31.064 | 235 | 121 | 8 | 18 | 221 | 9 | 233 | 1.40e-21 | 97.1 |
MsG0480018735.01.T01 | MTR_8g445860 | 27.407 | 270 | 117 | 8 | 236 | 469 | 8 | 234 | 4.07e-20 | 89.7 |
MsG0480018735.01.T01 | MTR_8g445860 | 26.939 | 245 | 128 | 8 | 1 | 210 | 7 | 235 | 1.25e-12 | 68.2 |
MsG0480018735.01.T01 | MTR_0150s0010 | 30.645 | 248 | 146 | 8 | 237 | 472 | 6 | 239 | 1.89e-17 | 82.0 |
MsG0480018735.01.T01 | MTR_0150s0010 | 40.000 | 105 | 48 | 4 | 1 | 104 | 1 | 91 | 1.98e-11 | 64.3 |
MsG0480018735.01.T01 | MTR_1g115440 | 27.547 | 265 | 149 | 7 | 226 | 472 | 1 | 240 | 2.33e-17 | 82.0 |
MsG0480018735.01.T01 | MTR_1g115440 | 36.207 | 116 | 58 | 3 | 1 | 114 | 1 | 102 | 1.67e-11 | 64.7 |
MsG0480018735.01.T01 | MTR_8g023240 | 24.370 | 357 | 203 | 10 | 9 | 323 | 37 | 368 | 6.62e-17 | 84.0 |
MsG0480018735.01.T01 | MTR_7g062270 | 37.013 | 154 | 75 | 7 | 1 | 142 | 1 | 144 | 8.70e-17 | 82.8 |
MsG0480018735.01.T01 | MTR_1g115450 | 37.500 | 120 | 60 | 3 | 236 | 352 | 2 | 109 | 6.71e-15 | 72.0 |
MsG0480018735.01.T01 | MTR_1g115450 | 33.117 | 154 | 71 | 6 | 1 | 138 | 1 | 138 | 2.94e-12 | 64.7 |
MsG0480018735.01.T01 | MTR_7g063690 | 30.112 | 269 | 131 | 8 | 4 | 268 | 7 | 222 | 1.71e-14 | 73.6 |
MsG0480018735.01.T01 | MTR_1g115455 | 39.806 | 103 | 46 | 3 | 1 | 102 | 1 | 88 | 9.02e-14 | 71.2 |
MsG0480018735.01.T01 | MTR_1g115455 | 27.869 | 244 | 146 | 8 | 237 | 469 | 5 | 229 | 1.12e-13 | 70.9 |
MsG0480018735.01.T01 | MTR_6g006800 | 73.913 | 46 | 10 | 1 | 1 | 44 | 1 | 46 | 1.32e-13 | 66.2 |
MsG0480018735.01.T01 | MTR_0150s0030 | 38.202 | 89 | 45 | 2 | 237 | 316 | 4 | 91 | 1.47e-12 | 67.4 |
MsG0480018735.01.T01 | MTR_0150s0030 | 34.314 | 102 | 54 | 1 | 3 | 104 | 2 | 90 | 5.65e-12 | 65.5 |
MsG0480018735.01.T01 | MTR_7g100420 | 28.966 | 290 | 166 | 8 | 190 | 469 | 134 | 393 | 3.15e-12 | 68.6 |
MsG0480018735.01.T01 | MTR_7g100420 | 69.767 | 43 | 13 | 0 | 9 | 51 | 39 | 81 | 1.72e-11 | 66.6 |
MsG0480018735.01.T01 | MTR_8g445920 | 41.791 | 67 | 39 | 0 | 237 | 303 | 6 | 72 | 4.83e-12 | 63.2 |
MsG0480018735.01.T01 | MTR_8g044890 | 41.791 | 67 | 39 | 0 | 237 | 303 | 6 | 72 | 4.83e-12 | 63.2 |
MsG0480018735.01.T01 | MTR_8g445910 | 39.326 | 89 | 44 | 2 | 237 | 316 | 4 | 91 | 5.90e-12 | 66.6 |
MsG0480018735.01.T01 | MTR_8g445910 | 37.255 | 102 | 51 | 2 | 3 | 104 | 2 | 90 | 1.17e-11 | 65.9 |
MsG0480018735.01.T01 | MTR_8g044880 | 43.284 | 67 | 38 | 0 | 237 | 303 | 4 | 70 | 1.06e-11 | 65.9 |
MsG0480018735.01.T01 | MTR_8g044880 | 37.255 | 102 | 51 | 2 | 3 | 104 | 2 | 90 | 1.08e-11 | 65.9 |
MsG0480018735.01.T01 | MTR_7g063720 | 26.667 | 210 | 125 | 5 | 12 | 207 | 26 | 220 | 5.78e-11 | 63.2 |
MsG0480018735.01.T01 | MTR_7g063870 | 55.556 | 54 | 24 | 0 | 3 | 56 | 25 | 78 | 6.39e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018735.01.T01 | AT5G01130 | 30.724 | 511 | 262 | 17 | 1 | 479 | 1 | 451 | 1.86e-55 | 192 |
MsG0480018735.01.T01 | AT5G01150 | 30.608 | 526 | 285 | 17 | 1 | 483 | 1 | 489 | 1.93e-55 | 193 |
MsG0480018735.01.T01 | AT5G01120 | 28.520 | 554 | 290 | 17 | 1 | 492 | 1 | 510 | 3.68e-53 | 187 |
MsG0480018735.01.T01 | AT3G09140 | 28.172 | 536 | 281 | 17 | 1 | 474 | 1 | 494 | 4.31e-47 | 171 |
MsG0480018735.01.T01 | AT5G43240 | 29.537 | 562 | 284 | 24 | 1 | 500 | 1 | 512 | 1.93e-44 | 164 |
MsG0480018735.01.T01 | AT5G43240 | 29.537 | 562 | 284 | 24 | 1 | 500 | 1 | 512 | 1.93e-44 | 164 |
MsG0480018735.01.T01 | AT5G43240 | 29.537 | 562 | 284 | 24 | 1 | 500 | 1 | 512 | 1.93e-44 | 164 |
MsG0480018735.01.T01 | AT5G01140 | 30.337 | 534 | 277 | 19 | 1 | 500 | 1 | 473 | 1.45e-43 | 160 |
MsG0480018735.01.T01 | AT3G09140 | 26.773 | 564 | 281 | 18 | 1 | 474 | 1 | 522 | 2.07e-41 | 155 |
MsG0480018735.01.T01 | AT3G09110 | 30.631 | 333 | 187 | 9 | 1 | 303 | 1 | 319 | 2.55e-39 | 146 |
MsG0480018735.01.T01 | AT3G09120 | 32.530 | 332 | 161 | 12 | 6 | 295 | 3 | 313 | 3.32e-38 | 142 |
MsG0480018735.01.T01 | AT3G09120 | 28.862 | 246 | 146 | 8 | 237 | 469 | 2 | 231 | 4.75e-17 | 82.4 |
MsG0480018735.01.T01 | AT5G37320 | 28.273 | 527 | 273 | 20 | 4 | 474 | 3 | 480 | 1.54e-36 | 141 |
MsG0480018735.01.T01 | AT5G43240 | 27.451 | 357 | 196 | 15 | 167 | 500 | 52 | 368 | 7.68e-17 | 82.8 |
Find 109 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAGGAACAATGAAGATTT+TGG | 0.106889 | 4:+9121009 | None:intergenic |
TTCAGTTGATACAAATATTT+TGG | 0.148832 | 4:+9119158 | None:intergenic |
GCCTTTGACAAATACAATTT+TGG | 0.171177 | 4:-9119693 | MsG0480018735.01.T01:CDS |
CATCATTTGAGTCAAGATTT+TGG | 0.186194 | 4:+9121171 | None:intergenic |
AGGTGGGTTGTCTTTGTTAT+TGG | 0.209021 | 4:+9119655 | None:intergenic |
AGGATCCATTGTAAAGCTTT+TGG | 0.229184 | 4:-9119474 | MsG0480018735.01.T01:CDS |
CTCTTACAAAGACCCCATTT+TGG | 0.250177 | 4:+9120928 | None:intergenic |
TAATAAACAGCCTAAGAATT+TGG | 0.255600 | 4:-9120976 | MsG0480018735.01.T01:CDS |
CAAGGGAATAATGCCCAAAA+TGG | 0.256693 | 4:-9120942 | MsG0480018735.01.T01:CDS |
AAAGAAGTTGATTCTGGTTT+AGG | 0.264864 | 4:+9118767 | None:intergenic |
AAAAGAGTTGATTCTGGTTT+AGG | 0.264864 | 4:+9118797 | None:intergenic |
CAGCAGTAAAATGGATATTA+AGG | 0.266548 | 4:-9119588 | MsG0480018735.01.T01:CDS |
GTTGTCTTTGTTATTGGATT+TGG | 0.286232 | 4:+9119661 | None:intergenic |
CCCCAGTAACAGCAGTAAAA+TGG | 0.289568 | 4:-9119597 | MsG0480018735.01.T01:CDS |
CCATCAGAGTCCAAATTCTT+AGG | 0.296726 | 4:+9120966 | None:intergenic |
ACTACATATTACTATGGTAT+AGG | 0.297573 | 4:-9119302 | MsG0480018735.01.T01:CDS |
TCTGATCCGTTGACAGATCT+TGG | 0.308929 | 4:+9119134 | None:intergenic |
ACTTTCAAAGAAGTTGATTC+TGG | 0.313498 | 4:+9118761 | None:intergenic |
GTGTAGGCTTTGCGCTTTCT+TGG | 0.313698 | 4:-9118878 | MsG0480018735.01.T01:intron |
CACTAACTGCTGACGCGAAT+TGG | 0.319399 | 4:+9119630 | None:intergenic |
GTGAAGAGAGCAACATTATA+TGG | 0.320276 | 4:-9119095 | MsG0480018735.01.T01:CDS |
AACGGATCAGAAGATGTTAT+TGG | 0.323448 | 4:-9119122 | MsG0480018735.01.T01:CDS |
CAATGCTTCACAGGGATTCC+TGG | 0.327327 | 4:+9121109 | None:intergenic |
ATTCTAATTGCTGTTGTTGT+TGG | 0.345070 | 4:+9121237 | None:intergenic |
ATCTTGACTCAAATGATGTT+TGG | 0.353696 | 4:-9121166 | MsG0480018735.01.T01:CDS |
GGAATATTGAGTGGCTGGTT+TGG | 0.356833 | 4:+9119344 | None:intergenic |
CTGATCCGTTGACAGATCTT+GGG | 0.368056 | 4:+9119135 | None:intergenic |
GTGTGTGATGGTAGTGCTTC+AGG | 0.372250 | 4:+9119323 | None:intergenic |
CTACATATTACTATGGTATA+GGG | 0.380267 | 4:-9119301 | MsG0480018735.01.T01:CDS |
GAAGTCAACAAAATCTTCAT+TGG | 0.384187 | 4:+9119523 | None:intergenic |
GACAATGGGATTAAAGATAG+AGG | 0.393004 | 4:-9119219 | MsG0480018735.01.T01:CDS |
TTTACTGCTGTTACTGGGGC+AGG | 0.397489 | 4:+9119601 | None:intergenic |
AGCCTCCTTATCATGCCATT+AGG | 0.400345 | 4:-9119494 | MsG0480018735.01.T01:CDS |
ATGCAGATGTTGATTGAATC+CGG | 0.403317 | 4:-9120840 | MsG0480018735.01.T01:intron |
TCACACACTACATATTACTA+TGG | 0.403604 | 4:-9119308 | MsG0480018735.01.T01:CDS |
GGATTGAGTAACACAGAAAC+CGG | 0.407217 | 4:+9119392 | None:intergenic |
AAGGGAATAATGCCCAAAAT+GGG | 0.410995 | 4:-9120941 | MsG0480018735.01.T01:CDS |
TGTTGTTGTCGGTGGCTAAA+AGG | 0.414665 | 4:+9121264 | None:intergenic |
TTGTTGGTTGTTGTTGTTGT+CGG | 0.415272 | 4:+9121253 | None:intergenic |
GATTCCCCTCAAATTGTTAG+TGG | 0.418530 | 4:-9121384 | MsG0480018735.01.T01:CDS |
AGCAGCATTTGTTTGCATAC+AGG | 0.418740 | 4:+9121137 | None:intergenic |
TCCTCTAGTTGAGTCAAGTC+TGG | 0.422333 | 4:+9120813 | None:intergenic |
ACATTCAAAAGAGTTGATTC+TGG | 0.427743 | 4:+9118791 | None:intergenic |
TTAGAATCATCTCCATTCCT+TGG | 0.428257 | 4:-9121221 | MsG0480018735.01.T01:CDS |
ATTCTTAGGCTGTTTATTAG+TGG | 0.429316 | 4:+9120980 | None:intergenic |
CTTCAGGAATATTGAGTGGC+TGG | 0.429354 | 4:+9119339 | None:intergenic |
CAAAGGCTCATGAGAGGTTA+AGG | 0.430177 | 4:+9119709 | None:intergenic |
GTTTGTCCACTAACAATTTG+AGG | 0.431321 | 4:+9121378 | None:intergenic |
TTCTTAGGCTGTTTATTAGT+GGG | 0.434937 | 4:+9120981 | None:intergenic |
AGCAAAGAATTAGAAGAAAG+TGG | 0.435467 | 4:+9119047 | None:intergenic |
CCTGGTATAGCACCACAGTT+TGG | 0.441678 | 4:-9119371 | MsG0480018735.01.T01:CDS |
CTTCATGCACAATGCTTCAC+AGG | 0.442099 | 4:+9121100 | None:intergenic |
AACAAATGCTGCTGCATCCC+AGG | 0.442581 | 4:-9121127 | MsG0480018735.01.T01:CDS |
TTTGATCGTAATGTGACAAT+GGG | 0.446693 | 4:-9119233 | MsG0480018735.01.T01:CDS |
GCCAAAATTGTATTTGTCAA+AGG | 0.452427 | 4:+9119692 | None:intergenic |
CAAAATCTTCATTGTTCCTG+TGG | 0.454041 | 4:-9121008 | MsG0480018735.01.T01:CDS |
GCAGCATTTGTTTGCATACA+GGG | 0.462327 | 4:+9121138 | None:intergenic |
GTTTCTGTGTTACTCAATCC+TGG | 0.470852 | 4:-9119389 | MsG0480018735.01.T01:CDS |
ACTGCTGACGCGAATTGGTT+AGG | 0.479883 | 4:+9119635 | None:intergenic |
AGCTTTACAATGGATCCTAA+TGG | 0.496722 | 4:+9119479 | None:intergenic |
AGAGCAACATTATATGGTAT+AGG | 0.499621 | 4:-9119089 | MsG0480018735.01.T01:CDS |
CCAAACTGTGGTGCTATACC+AGG | 0.500141 | 4:+9119371 | None:intergenic |
AGGAGTGATTTCTATGTCAC+GGG | 0.505545 | 4:-9119195 | MsG0480018735.01.T01:CDS |
TTTGTCCACTAACAATTTGA+GGG | 0.510209 | 4:+9121379 | None:intergenic |
AATGCTTCACAGGGATTCCT+GGG | 0.511341 | 4:+9121110 | None:intergenic |
TGGATCCTAATGGCATGATA+AGG | 0.526729 | 4:+9119489 | None:intergenic |
CAAGATTTACCTTGACTAGT+GGG | 0.535241 | 4:-9118841 | MsG0480018735.01.T01:CDS |
ACACAGCCAGCAAAAGAGTT+CGG | 0.547905 | 4:+9119449 | None:intergenic |
TTACTGCTGTTACTGGGGCA+GGG | 0.548093 | 4:+9119602 | None:intergenic |
CTTCAAGATCATCAAGAGGA+AGG | 0.549012 | 4:+9119003 | None:intergenic |
AGTTTCTTATCTCTTCCACT+AGG | 0.552281 | 4:-9121299 | MsG0480018735.01.T01:CDS |
ACAATGGGATTAAAGATAGA+GGG | 0.553301 | 4:-9119218 | MsG0480018735.01.T01:CDS |
TCAAGATTTACCTTGACTAG+TGG | 0.556631 | 4:-9118842 | MsG0480018735.01.T01:CDS |
ATTTGGACTCTGATGGTCAA+GGG | 0.559948 | 4:-9120959 | MsG0480018735.01.T01:CDS |
TGCAGATGTTGATTGAATCC+GGG | 0.567832 | 4:-9120839 | MsG0480018735.01.T01:intron |
ATGGGATTAAAGATAGAGGG+AGG | 0.573935 | 4:-9119215 | MsG0480018735.01.T01:CDS |
TTGGTTGTTGTTGTTGTCGG+TGG | 0.574189 | 4:+9121256 | None:intergenic |
GCTGATAAGCATTGGTGAAG+CGG | 0.574463 | 4:-9118976 | MsG0480018735.01.T01:CDS |
TTGAGTCAAGTCTGGATACC+CGG | 0.574651 | 4:+9120821 | None:intergenic |
CCTAAGAATTTGGACTCTGA+TGG | 0.584071 | 4:-9120966 | MsG0480018735.01.T01:CDS |
TGGTGATTTGTACAAAAGTG+TGG | 0.589324 | 4:-9119426 | MsG0480018735.01.T01:CDS |
GAGGAGTGATTTCTATGTCA+CGG | 0.590457 | 4:-9119196 | MsG0480018735.01.T01:CDS |
ACTCAACATTGGCAAGAATG+AGG | 0.596978 | 4:-9120784 | MsG0480018735.01.T01:intron |
CGGTCCCAAAAGCTTTACAA+TGG | 0.598458 | 4:+9119469 | None:intergenic |
GTCTTTAAACCCACTAGTCA+AGG | 0.602166 | 4:+9118832 | None:intergenic |
AAGTGTGGAGAACTTGAACC+CGG | 0.604718 | 4:-9119411 | MsG0480018735.01.T01:CDS |
TTCATGCACAATGCTTCACA+GGG | 0.606125 | 4:+9121101 | None:intergenic |
ATCCTAATGGCATGATAAGG+AGG | 0.608383 | 4:+9119492 | None:intergenic |
AGGTTAAGGCATACTTGAGG+AGG | 0.618815 | 4:+9119723 | None:intergenic |
CTGACGCGAATTGGTTAGGT+GGG | 0.620135 | 4:+9119639 | None:intergenic |
TTCACTTCAAGATCATCAAG+AGG | 0.622399 | 4:+9118999 | None:intergenic |
GAGGAAGTCACACTCAACAT+TGG | 0.623038 | 4:-9120795 | MsG0480018735.01.T01:CDS |
GCTGACGCGAATTGGTTAGG+TGG | 0.625599 | 4:+9119638 | None:intergenic |
TTGTCCACTAACAATTTGAG+GGG | 0.626053 | 4:+9121380 | None:intergenic |
TCCAGACTTGACTCAACTAG+AGG | 0.641739 | 4:-9120814 | MsG0480018735.01.T01:CDS |
AATTTGGACTCTGATGGTCA+AGG | 0.642808 | 4:-9120960 | MsG0480018735.01.T01:CDS |
ATTTGTCAAAGGCTCATGAG+AGG | 0.647356 | 4:+9119703 | None:intergenic |
GATAAGCATTGGTGAAGCGG+AGG | 0.652499 | 4:-9118973 | MsG0480018735.01.T01:intron |
AGGGAATAATGCCCAAAATG+GGG | 0.662697 | 4:-9120940 | MsG0480018735.01.T01:CDS |
GAAGTGAAGCTGATAAGCAT+TGG | 0.664925 | 4:-9118984 | MsG0480018735.01.T01:CDS |
TAGTAATATGTAGTGTGTGA+TGG | 0.665437 | 4:+9119311 | None:intergenic |
AGGCGAACGATGGTGCCTAG+TGG | 0.669570 | 4:+9121284 | None:intergenic |
GGTGGCTAAAAGGCGAACGA+TGG | 0.673624 | 4:+9121274 | None:intergenic |
CTGAACCCAAGATCTGTCAA+CGG | 0.682568 | 4:-9119140 | MsG0480018735.01.T01:CDS |
GAGAGGTTAAGGCATACTTG+AGG | 0.684746 | 4:+9119720 | None:intergenic |
GATTGAGTAACACAGAAACC+GGG | 0.708506 | 4:+9119393 | None:intergenic |
AGTGCTTCAGGAATATTGAG+TGG | 0.733381 | 4:+9119335 | None:intergenic |
TGGTTTGGACAACCAAACTG+TGG | 0.745392 | 4:+9119359 | None:intergenic |
GGAGTGATTTCTATGTCACG+GGG | 0.766109 | 4:-9119194 | MsG0480018735.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATAATAAAAAGAAAAAA+CGG | + | Chr4:9119421-9119440 | None:intergenic | 10.0% |
!! | TGATAATAAAAAGAAAAAAC+GGG | + | Chr4:9119420-9119439 | None:intergenic | 15.0% |
!!! | ATTTTCAATTTTTTTTTCCT+AGG | - | Chr4:9120341-9120360 | MsG0480018735.01.T01:intron | 15.0% |
!!! | GTTTTTTCTTTTTATTATCA+AGG | - | Chr4:9119420-9119439 | MsG0480018735.01.T01:CDS | 15.0% |
!! | AAAGATTGTTTAGATTTAAG+AGG | + | Chr4:9119599-9119618 | None:intergenic | 20.0% |
!! | AATGAAATTGCAGAAAAAAA+AGG | + | Chr4:9120315-9120334 | None:intergenic | 20.0% |
!! | ACAAAATGTTAAAACACAAA+AGG | + | Chr4:9120382-9120401 | None:intergenic | 20.0% |
!! | ACATAAAAGCAAAACTAAAA+AGG | + | Chr4:9120154-9120173 | None:intergenic | 20.0% |
!! | GAAATTAAAAACTTCTGTAA+AGG | - | Chr4:9120234-9120253 | MsG0480018735.01.T01:intron | 20.0% |
!! | TCGTAAAAAATCTATGTAAT+GGG | + | Chr4:9119996-9120015 | None:intergenic | 20.0% |
!! | TTGAATGAAAGAATGAAAAT+AGG | + | Chr4:9120282-9120301 | None:intergenic | 20.0% |
!!! | AAATATGAGACATTTAAGTT+AGG | + | Chr4:9119464-9119483 | None:intergenic | 20.0% |
!!! | AGATTAAGAAACATGATTTT+CGG | - | Chr4:9119538-9119557 | MsG0480018735.01.T01:CDS | 20.0% |
!!! | TAGATAATATTTTTCCATGT+AGG | + | Chr4:9119699-9119718 | None:intergenic | 20.0% |
!!! | TATTGATTTATTTACCTACA+TGG | - | Chr4:9119682-9119701 | MsG0480018735.01.T01:CDS | 20.0% |
!!! | TTCAGTTGATACAAATATTT+TGG | + | Chr4:9120982-9121001 | None:intergenic | 20.0% |
! | ACAATTAAAGTGAATCAAAG+AGG | + | Chr4:9121238-9121257 | None:intergenic | 25.0% |
! | ACTACATATTACTATGGTAT+AGG | - | Chr4:9120835-9120854 | MsG0480018735.01.T01:CDS | 25.0% |
! | ATTCACTTTAATTGTTGTGT+AGG | - | Chr4:9121243-9121262 | MsG0480018735.01.T01:CDS | 25.0% |
! | CGTAAAAAATCTATGTAATG+GGG | + | Chr4:9119995-9120014 | None:intergenic | 25.0% |
! | CTACATATTACTATGGTATA+GGG | - | Chr4:9120836-9120855 | MsG0480018735.01.T01:CDS | 25.0% |
! | CTCGTAAAAAATCTATGTAA+TGG | + | Chr4:9119997-9120016 | None:intergenic | 25.0% |
! | GTAAAAAATCTATGTAATGG+GGG | + | Chr4:9119994-9120013 | None:intergenic | 25.0% |
! | TAATAAACAGCCTAAGAATT+TGG | - | Chr4:9119161-9119180 | MsG0480018735.01.T01:CDS | 25.0% |
! | TCTCATATTTCTCAAAAATG+CGG | - | Chr4:9119474-9119493 | MsG0480018735.01.T01:CDS | 25.0% |
! | TTAATCTTATCGATCTCATA+AGG | + | Chr4:9119525-9119544 | None:intergenic | 25.0% |
! | TTCTGTAAAGGTGAAATATT+TGG | - | Chr4:9120246-9120265 | MsG0480018735.01.T01:intron | 25.0% |
!! | AATCTAAACAATCTTTTCGT+AGG | - | Chr4:9119603-9119622 | MsG0480018735.01.T01:CDS | 25.0% |
!!! | AGCTAGTTTTATAGCAATTA+TGG | + | Chr4:9119947-9119966 | None:intergenic | 25.0% |
ACAATGGGATTAAAGATAGA+GGG | - | Chr4:9120919-9120938 | MsG0480018735.01.T01:intron | 30.0% | |
AGAAAATGGATCATTGTTTC+TGG | - | Chr4:9119230-9119249 | MsG0480018735.01.T01:CDS | 30.0% | |
AGAGCAACATTATATGGTAT+AGG | - | Chr4:9121048-9121067 | MsG0480018735.01.T01:CDS | 30.0% | |
AGCAAAGAATTAGAAGAAAG+TGG | + | Chr4:9121093-9121112 | None:intergenic | 30.0% | |
ATAAAATGCAGACAAATGCT+AGG | - | Chr4:9120042-9120061 | MsG0480018735.01.T01:intron | 30.0% | |
ATCTTGACTCAAATGATGTT+TGG | - | Chr4:9118971-9118990 | MsG0480018735.01.T01:intron | 30.0% | |
ATGTTAATGTTCCAAGTGAA+AGG | - | Chr4:9120090-9120109 | MsG0480018735.01.T01:intron | 30.0% | |
ATTCTTAGGCTGTTTATTAG+TGG | + | Chr4:9119160-9119179 | None:intergenic | 30.0% | |
CACACAAAAACTTTACTTGT+TGG | + | Chr4:9119081-9119100 | None:intergenic | 30.0% | |
CAGCAGTAAAATGGATATTA+AGG | - | Chr4:9120549-9120568 | MsG0480018735.01.T01:intron | 30.0% | |
GAAGTCAACAAAATCTTCAT+TGG | + | Chr4:9120617-9120636 | None:intergenic | 30.0% | |
GCCAAAATTGTATTTGTCAA+AGG | + | Chr4:9120448-9120467 | None:intergenic | 30.0% | |
GCTAGTAAAATATGTATGCA+TGG | + | Chr4:9120206-9120225 | None:intergenic | 30.0% | |
GTATAGGAATAAACAAACCA+TGG | - | Chr4:9119560-9119579 | MsG0480018735.01.T01:CDS | 30.0% | |
TAGTAATATGTAGTGTGTGA+TGG | + | Chr4:9120829-9120848 | None:intergenic | 30.0% | |
TCACACACTACATATTACTA+TGG | - | Chr4:9120829-9120848 | MsG0480018735.01.T01:CDS | 30.0% | |
TTCTTAGGCTGTTTATTAGT+GGG | + | Chr4:9119159-9119178 | None:intergenic | 30.0% | |
TTTGATCGTAATGTGACAAT+GGG | - | Chr4:9120904-9120923 | MsG0480018735.01.T01:intron | 30.0% | |
TTTGTCCACTAACAATTTGA+GGG | + | Chr4:9118761-9118780 | None:intergenic | 30.0% | |
! | ACATTCAAAAGAGTTGATTC+TGG | + | Chr4:9121349-9121368 | None:intergenic | 30.0% |
! | ACATTTAAGTTAGGCAAGTA+AGG | + | Chr4:9119455-9119474 | None:intergenic | 30.0% |
! | ACTTTCAAAGAAGTTGATTC+TGG | + | Chr4:9121379-9121398 | None:intergenic | 30.0% |
! | AGAAACATGATTTTCGGTAT+AGG | - | Chr4:9119544-9119563 | MsG0480018735.01.T01:CDS | 30.0% |
! | ATTCTAATTGCTGTTGTTGT+TGG | + | Chr4:9118903-9118922 | None:intergenic | 30.0% |
! | ATTTGAGTCAAGATTTTGGA+CGG | + | Chr4:9118965-9118984 | None:intergenic | 30.0% |
! | CATCATTTGAGTCAAGATTT+TGG | + | Chr4:9118969-9118988 | None:intergenic | 30.0% |
! | GCCTTTGACAAATACAATTT+TGG | - | Chr4:9120444-9120463 | MsG0480018735.01.T01:intron | 30.0% |
! | TAGCATTTGTCTGCATTTTA+TGG | + | Chr4:9120043-9120062 | None:intergenic | 30.0% |
! | TCTAGTCGATTTAATAGATC+AGG | - | Chr4:9119715-9119734 | MsG0480018735.01.T01:CDS | 30.0% |
! | TTTTGATCGTAATGTGACAA+TGG | - | Chr4:9120903-9120922 | MsG0480018735.01.T01:intron | 30.0% |
! | TTTTTGATGTTTCCAAGGAA+TGG | + | Chr4:9118931-9118950 | None:intergenic | 30.0% |
!! | AAAAGAGTTGATTCTGGTTT+AGG | + | Chr4:9121343-9121362 | None:intergenic | 30.0% |
!! | AAAGAAGTTGATTCTGGTTT+AGG | + | Chr4:9121373-9121392 | None:intergenic | 30.0% |
!! | GTTGTCTTTGTTATTGGATT+TGG | + | Chr4:9120479-9120498 | None:intergenic | 30.0% |
!!! | GTCAATGTTGATTCTGTTTT+AGG | + | Chr4:9121403-9121422 | None:intergenic | 30.0% |
AAAAATGCGGTTCGATTGTT+GGG | - | Chr4:9119487-9119506 | MsG0480018735.01.T01:CDS | 35.0% | |
AAATTGGTGGAAAACATGGA+TGG | - | Chr4:9119787-9119806 | MsG0480018735.01.T01:intron | 35.0% | |
AACGGATCAGAAGATGTTAT+TGG | - | Chr4:9121015-9121034 | MsG0480018735.01.T01:CDS | 35.0% | |
AAGGGAATAATGCCCAAAAT+GGG | - | Chr4:9119196-9119215 | MsG0480018735.01.T01:CDS | 35.0% | |
ACGAAAATTGGTGGAAAACA+TGG | - | Chr4:9119783-9119802 | MsG0480018735.01.T01:intron | 35.0% | |
AGCATGATATTTGCAGAGAA+CGG | + | Chr4:9120122-9120141 | None:intergenic | 35.0% | |
AGCTTTACAATGGATCCTAA+TGG | + | Chr4:9120661-9120680 | None:intergenic | 35.0% | |
AGTTTCTTATCTCTTCCACT+AGG | - | Chr4:9118838-9118857 | MsG0480018735.01.T01:CDS | 35.0% | |
CAAAATCTTCATTGTTCCTG+TGG | - | Chr4:9119129-9119148 | MsG0480018735.01.T01:CDS | 35.0% | |
CAAGATTTACCTTGACTAGT+GGG | - | Chr4:9121296-9121315 | MsG0480018735.01.T01:CDS | 35.0% | |
GACAATGGGATTAAAGATAG+AGG | - | Chr4:9120918-9120937 | MsG0480018735.01.T01:intron | 35.0% | |
GGTAAGAAAAACATGAACCT+AGG | + | Chr4:9120361-9120380 | None:intergenic | 35.0% | |
GTGAAGAGAGCAACATTATA+TGG | - | Chr4:9121042-9121061 | MsG0480018735.01.T01:CDS | 35.0% | |
GTTTGTCCACTAACAATTTG+AGG | + | Chr4:9118762-9118781 | None:intergenic | 35.0% | |
TCAAGATTTACCTTGACTAG+TGG | - | Chr4:9121295-9121314 | MsG0480018735.01.T01:CDS | 35.0% | |
TTAGAATCATCTCCATTCCT+TGG | - | Chr4:9118916-9118935 | MsG0480018735.01.T01:intron | 35.0% | |
TTCACTTCAAGATCATCAAG+AGG | + | Chr4:9121141-9121160 | None:intergenic | 35.0% | |
TTGTCCACTAACAATTTGAG+GGG | + | Chr4:9118760-9118779 | None:intergenic | 35.0% | |
! | ACTAGCTCTCTTTCAATCTT+AGG | - | Chr4:9119960-9119979 | MsG0480018735.01.T01:intron | 35.0% |
! | AGAGGTTTTTGATGTTTCCA+AGG | + | Chr4:9118936-9118955 | None:intergenic | 35.0% |
! | AGGATCCATTGTAAAGCTTT+TGG | - | Chr4:9120663-9120682 | MsG0480018735.01.T01:intron | 35.0% |
! | ATCCATTTTACTGCTGTTAC+TGG | + | Chr4:9120545-9120564 | None:intergenic | 35.0% |
! | ATGCAGATGTTGATTGAATC+CGG | - | Chr4:9119297-9119316 | MsG0480018735.01.T01:CDS | 35.0% |
! | CACAGGAACAATGAAGATTT+TGG | + | Chr4:9119131-9119150 | None:intergenic | 35.0% |
! | GGATCCATTGTAAAGCTTTT+GGG | - | Chr4:9120664-9120683 | MsG0480018735.01.T01:intron | 35.0% |
! | TCCATTTTACTGCTGTTACT+GGG | + | Chr4:9120544-9120563 | None:intergenic | 35.0% |
! | TCTTACAAAGACCCCATTTT+GGG | + | Chr4:9119211-9119230 | None:intergenic | 35.0% |
! | TGGTGATTTGTACAAAAGTG+TGG | - | Chr4:9120711-9120730 | MsG0480018735.01.T01:intron | 35.0% |
! | TTGTTGGTTGTTGTTGTTGT+CGG | + | Chr4:9118887-9118906 | None:intergenic | 35.0% |
!!! | TTTATTAGTGGGTTTTCCAC+AGG | + | Chr4:9119148-9119167 | None:intergenic | 35.0% |
AACGGATCTATCCTTTCACT+TGG | + | Chr4:9120104-9120123 | None:intergenic | 40.0% | |
AATCAATTTGATCCCCCGAT+TGG | + | Chr4:9119642-9119661 | None:intergenic | 40.0% | |
AATTTGGACTCTGATGGTCA+AGG | - | Chr4:9119177-9119196 | MsG0480018735.01.T01:CDS | 40.0% | |
ACTCAACATTGGCAAGAATG+AGG | - | Chr4:9119353-9119372 | MsG0480018735.01.T01:CDS | 40.0% | |
AGCAGCATTTGTTTGCATAC+AGG | + | Chr4:9119003-9119022 | None:intergenic | 40.0% | |
AGGAGTGATTTCTATGTCAC+GGG | - | Chr4:9120942-9120961 | MsG0480018735.01.T01:CDS | 40.0% | |
AGGGAATAATGCCCAAAATG+GGG | - | Chr4:9119197-9119216 | MsG0480018735.01.T01:CDS | 40.0% | |
AGTGCTTCAGGAATATTGAG+TGG | + | Chr4:9120805-9120824 | None:intergenic | 40.0% | |
ATCCTAATGGCATGATAAGG+AGG | + | Chr4:9120648-9120667 | None:intergenic | 40.0% | |
ATGGGATTAAAGATAGAGGG+AGG | - | Chr4:9120922-9120941 | MsG0480018735.01.T01:intron | 40.0% | |
ATTTGGACTCTGATGGTCAA+GGG | - | Chr4:9119178-9119197 | MsG0480018735.01.T01:CDS | 40.0% | |
ATTTGTCAAAGGCTCATGAG+AGG | + | Chr4:9120437-9120456 | None:intergenic | 40.0% | |
CAAAAATGCGGTTCGATTGT+TGG | - | Chr4:9119486-9119505 | MsG0480018735.01.T01:CDS | 40.0% | |
CAAGGGAATAATGCCCAAAA+TGG | - | Chr4:9119195-9119214 | MsG0480018735.01.T01:CDS | 40.0% | |
CCATCAGAGTCCAAATTCTT+AGG | + | Chr4:9119174-9119193 | None:intergenic | 40.0% | |
CCTAAGAATTTGGACTCTGA+TGG | - | Chr4:9119171-9119190 | MsG0480018735.01.T01:CDS | 40.0% | |
CTTCAAGATCATCAAGAGGA+AGG | + | Chr4:9121137-9121156 | None:intergenic | 40.0% | |
GAAGTGAAGCTGATAAGCAT+TGG | - | Chr4:9121153-9121172 | MsG0480018735.01.T01:CDS | 40.0% | |
GAGGAGTGATTTCTATGTCA+CGG | - | Chr4:9120941-9120960 | MsG0480018735.01.T01:CDS | 40.0% | |
GATTCCCCTCAAATTGTTAG+TGG | - | Chr4:9118753-9118772 | MsG0480018735.01.T01:CDS | 40.0% | |
GATTGAGTAACACAGAAACC+GGG | + | Chr4:9120747-9120766 | None:intergenic | 40.0% | |
GCAGCATTTGTTTGCATACA+GGG | + | Chr4:9119002-9119021 | None:intergenic | 40.0% | |
GGATTCAATCAACATCTGCA+TGG | + | Chr4:9119298-9119317 | None:intergenic | 40.0% | |
GGATTGAGTAACACAGAAAC+CGG | + | Chr4:9120748-9120767 | None:intergenic | 40.0% | |
GGGGTCTTTGTAAGAGAAAA+TGG | - | Chr4:9119216-9119235 | MsG0480018735.01.T01:CDS | 40.0% | |
GTCTTTAAACCCACTAGTCA+AGG | + | Chr4:9121308-9121327 | None:intergenic | 40.0% | |
TAACGTTGGACGAAAATTGG+TGG | - | Chr4:9119774-9119793 | MsG0480018735.01.T01:intron | 40.0% | |
TGCTAACGTTGGACGAAAAT+TGG | - | Chr4:9119771-9119790 | MsG0480018735.01.T01:intron | 40.0% | |
TGGATCCTAATGGCATGATA+AGG | + | Chr4:9120651-9120670 | None:intergenic | 40.0% | |
TTCAATCAACATCTGCATGG+AGG | + | Chr4:9119295-9119314 | None:intergenic | 40.0% | |
TTCATGCACAATGCTTCACA+GGG | + | Chr4:9119039-9119058 | None:intergenic | 40.0% | |
! | AGTCAAGATTTTGGACGGTT+TGG | + | Chr4:9118960-9118979 | None:intergenic | 40.0% |
! | CCATTTTACTGCTGTTACTG+GGG | + | Chr4:9120543-9120562 | None:intergenic | 40.0% |
! | CTCTTACAAAGACCCCATTT+TGG | + | Chr4:9119212-9119231 | None:intergenic | 40.0% |
! | GTTTCTGTGTTACTCAATCC+TGG | - | Chr4:9120748-9120767 | MsG0480018735.01.T01:intron | 40.0% |
! | TCTATGTAATGGGGGCATAA+TGG | + | Chr4:9119986-9120005 | None:intergenic | 40.0% |
! | TGCAGATGTTGATTGAATCC+GGG | - | Chr4:9119298-9119317 | MsG0480018735.01.T01:CDS | 40.0% |
!! | AGGTGGGTTGTCTTTGTTAT+TGG | + | Chr4:9120485-9120504 | None:intergenic | 40.0% |
AAGTGTGGAGAACTTGAACC+CGG | - | Chr4:9120726-9120745 | MsG0480018735.01.T01:intron | 45.0% | |
AATGCTTCACAGGGATTCCT+GGG | + | Chr4:9119030-9119049 | None:intergenic | 45.0% | |
ACACAGCCAGCAAAAGAGTT+CGG | + | Chr4:9120691-9120710 | None:intergenic | 45.0% | |
AGCCTCCTTATCATGCCATT+AGG | - | Chr4:9120643-9120662 | MsG0480018735.01.T01:intron | 45.0% | |
AGGTTAAGGCATACTTGAGG+AGG | + | Chr4:9120417-9120436 | None:intergenic | 45.0% | |
ATTTGATCCCCCGATTGGAT+CGG | + | Chr4:9119637-9119656 | None:intergenic | 45.0% | |
CAAAGGCTCATGAGAGGTTA+AGG | + | Chr4:9120431-9120450 | None:intergenic | 45.0% | |
CACGAAATGGTTGCTAACGT+TGG | - | Chr4:9119760-9119779 | MsG0480018735.01.T01:intron | 45.0% | |
CCCCAGTAACAGCAGTAAAA+TGG | - | Chr4:9120540-9120559 | MsG0480018735.01.T01:intron | 45.0% | |
CGGTCCCAAAAGCTTTACAA+TGG | + | Chr4:9120671-9120690 | None:intergenic | 45.0% | |
CTGAACCCAAGATCTGTCAA+CGG | - | Chr4:9120997-9121016 | MsG0480018735.01.T01:CDS | 45.0% | |
CTGATCCGTTGACAGATCTT+GGG | + | Chr4:9121005-9121024 | None:intergenic | 45.0% | |
CTGCAAATATCATGCTGCAG+TGG | - | Chr4:9120126-9120145 | MsG0480018735.01.T01:intron | 45.0% | |
CTTCAGGAATATTGAGTGGC+TGG | + | Chr4:9120801-9120820 | None:intergenic | 45.0% | |
CTTCATGCACAATGCTTCAC+AGG | + | Chr4:9119040-9119059 | None:intergenic | 45.0% | |
GAGAGGTTAAGGCATACTTG+AGG | + | Chr4:9120420-9120439 | None:intergenic | 45.0% | |
GAGGAAGTCACACTCAACAT+TGG | - | Chr4:9119342-9119361 | MsG0480018735.01.T01:CDS | 45.0% | |
GGAGTGATTTCTATGTCACG+GGG | - | Chr4:9120943-9120962 | MsG0480018735.01.T01:CDS | 45.0% | |
TCCAGACTTGACTCAACTAG+AGG | - | Chr4:9119323-9119342 | MsG0480018735.01.T01:CDS | 45.0% | |
TCCTCTAGTTGAGTCAAGTC+TGG | + | Chr4:9119327-9119346 | None:intergenic | 45.0% | |
TCTGATCCGTTGACAGATCT+TGG | + | Chr4:9121006-9121025 | None:intergenic | 45.0% | |
TGCAGACAAATGCTAGGATG+TGG | - | Chr4:9120048-9120067 | MsG0480018735.01.T01:intron | 45.0% | |
TGTTGTTGTCGGTGGCTAAA+AGG | + | Chr4:9118876-9118895 | None:intergenic | 45.0% | |
TTGAGTCAAGTCTGGATACC+CGG | + | Chr4:9119319-9119338 | None:intergenic | 45.0% | |
! | GAGGCGCTTAGATTTATCCA+TGG | + | Chr4:9119580-9119599 | None:intergenic | 45.0% |
! | GGAATATTGAGTGGCTGGTT+TGG | + | Chr4:9120796-9120815 | None:intergenic | 45.0% |
! | TGGTTTGGACAACCAAACTG+TGG | + | Chr4:9120781-9120800 | None:intergenic | 45.0% |
! | TTCACGAAGCACTCACGAAA+TGG | - | Chr4:9119747-9119766 | MsG0480018735.01.T01:intron | 45.0% |
! | TTGGTTGTTGTTGTTGTCGG+TGG | + | Chr4:9118884-9118903 | None:intergenic | 45.0% |
!! | AACTCTTTTGCTGGCTGTGT+TGG | - | Chr4:9120691-9120710 | MsG0480018735.01.T01:intron | 45.0% |
!! | GCTGATAAGCATTGGTGAAG+CGG | - | Chr4:9121161-9121180 | MsG0480018735.01.T01:CDS | 45.0% |
!!! | GATTTTGGACGGTTTGGTAG+AGG | + | Chr4:9118954-9118973 | None:intergenic | 45.0% |
AACAAATGCTGCTGCATCCC+AGG | - | Chr4:9119010-9119029 | MsG0480018735.01.T01:CDS | 50.0% | |
ACTGCTGACGCGAATTGGTT+AGG | + | Chr4:9120505-9120524 | None:intergenic | 50.0% | |
AGTTTGTCCCGATCCAATCG+GGG | - | Chr4:9119626-9119645 | MsG0480018735.01.T01:CDS | 50.0% | |
CAATGCTTCACAGGGATTCC+TGG | + | Chr4:9119031-9119050 | None:intergenic | 50.0% | |
CACTAACTGCTGACGCGAAT+TGG | + | Chr4:9120510-9120529 | None:intergenic | 50.0% | |
CCTGGTATAGCACCACAGTT+TGG | - | Chr4:9120766-9120785 | MsG0480018735.01.T01:intron | 50.0% | |
CTGACGCGAATTGGTTAGGT+GGG | + | Chr4:9120501-9120520 | None:intergenic | 50.0% | |
GAGTTTGTCCCGATCCAATC+GGG | - | Chr4:9119625-9119644 | MsG0480018735.01.T01:CDS | 50.0% | |
GCGGTTCGATTGTTGGGATT+TGG | - | Chr4:9119493-9119512 | MsG0480018735.01.T01:CDS | 50.0% | |
GGAGTTTGTCCCGATCCAAT+CGG | - | Chr4:9119624-9119643 | MsG0480018735.01.T01:CDS | 50.0% | |
GTGTAGGCTTTGCGCTTTCT+TGG | - | Chr4:9121259-9121278 | MsG0480018735.01.T01:CDS | 50.0% | |
TTACTGCTGTTACTGGGGCA+GGG | + | Chr4:9120538-9120557 | None:intergenic | 50.0% | |
TTTACTGCTGTTACTGGGGC+AGG | + | Chr4:9120539-9120558 | None:intergenic | 50.0% | |
TTTGATCCCCCGATTGGATC+GGG | + | Chr4:9119636-9119655 | None:intergenic | 50.0% | |
! | GTGTGTGATGGTAGTGCTTC+AGG | + | Chr4:9120817-9120836 | None:intergenic | 50.0% |
! | TTGGGACCGAACTCTTTTGC+TGG | - | Chr4:9120682-9120701 | MsG0480018735.01.T01:intron | 50.0% |
!! | CCAAACTGTGGTGCTATACC+AGG | + | Chr4:9120769-9120788 | None:intergenic | 50.0% |
!! | GATAAGCATTGGTGAAGCGG+AGG | - | Chr4:9121164-9121183 | MsG0480018735.01.T01:CDS | 50.0% |
CATCTGCATGGAGGACAGCA+AGG | + | Chr4:9119286-9119305 | None:intergenic | 55.0% | |
GCTGACGCGAATTGGTTAGG+TGG | + | Chr4:9120502-9120521 | None:intergenic | 55.0% | |
GGTGGCTAAAAGGCGAACGA+TGG | + | Chr4:9118866-9118885 | None:intergenic | 55.0% | |
GTTTGTCCCGATCCAATCGG+GGG | - | Chr4:9119627-9119646 | MsG0480018735.01.T01:CDS | 55.0% | |
AGGCGAACGATGGTGCCTAG+TGG | + | Chr4:9118856-9118875 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 9118727 | 9121432 | 9118727 | ID=MsG0480018735.01;Name=MsG0480018735.01 |
Chr4 | mRNA | 9118727 | 9121432 | 9118727 | ID=MsG0480018735.01.T01;Parent=MsG0480018735.01;Name=MsG0480018735.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|4|0|505 |
Chr4 | exon | 9120935 | 9121432 | 9120935 | ID=MsG0480018735.01.T01:exon:2237;Parent=MsG0480018735.01.T01 |
Chr4 | exon | 9120785 | 9120856 | 9120785 | ID=MsG0480018735.01.T01:exon:2236;Parent=MsG0480018735.01.T01 |
Chr4 | exon | 9118974 | 9119753 | 9118974 | ID=MsG0480018735.01.T01:exon:2235;Parent=MsG0480018735.01.T01 |
Chr4 | exon | 9118727 | 9118894 | 9118727 | ID=MsG0480018735.01.T01:exon:2234;Parent=MsG0480018735.01.T01 |
Chr4 | CDS | 9120935 | 9121432 | 9120935 | ID=MsG0480018735.01.T01:cds;Parent=MsG0480018735.01.T01 |
Chr4 | CDS | 9120785 | 9120856 | 9120785 | ID=MsG0480018735.01.T01:cds;Parent=MsG0480018735.01.T01 |
Chr4 | CDS | 9118974 | 9119753 | 9118974 | ID=MsG0480018735.01.T01:cds;Parent=MsG0480018735.01.T01 |
Chr4 | CDS | 9118727 | 9118894 | 9118727 | ID=MsG0480018735.01.T01:cds;Parent=MsG0480018735.01.T01 |
Gene Sequence |
Protein sequence |