Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018736.01.T01 | RHN58888.1 | 83.206 | 262 | 44 | 0 | 64 | 325 | 197 | 458 | 5.55E-152 | 446 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018736.01.T01 | A0A396I2A5 | 83.206 | 262 | 44 | 0 | 64 | 325 | 197 | 458 | 2.65e-152 | 446 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018736.01.T01 | MTR_4g017440 | 83.206 | 262 | 44 | 0 | 64 | 325 | 223 | 484 | 6.63e-155 | 444 |
MsG0480018736.01.T01 | MTR_4g017830 | 63.197 | 269 | 92 | 3 | 63 | 325 | 216 | 483 | 3.79e-109 | 328 |
MsG0480018736.01.T01 | MTR_4g017830 | 26.446 | 242 | 147 | 6 | 100 | 327 | 2 | 226 | 1.94e-12 | 68.2 |
MsG0480018736.01.T01 | MTR_4g017470 | 57.329 | 307 | 107 | 4 | 27 | 325 | 162 | 452 | 9.81e-108 | 323 |
MsG0480018736.01.T01 | MTR_4g019340 | 61.423 | 267 | 76 | 4 | 63 | 325 | 252 | 495 | 5.89e-99 | 301 |
MsG0480018736.01.T01 | MTR_4g017550 | 58.741 | 286 | 101 | 7 | 49 | 325 | 178 | 455 | 9.18e-93 | 284 |
MsG0480018736.01.T01 | MTR_4g017410 | 57.509 | 273 | 79 | 5 | 63 | 325 | 221 | 466 | 1.41e-88 | 274 |
MsG0480018736.01.T01 | MTR_4g017410 | 27.391 | 230 | 133 | 7 | 118 | 325 | 12 | 229 | 3.32e-12 | 67.4 |
MsG0480018736.01.T01 | MTR_4g017610 | 47.157 | 299 | 122 | 6 | 27 | 325 | 199 | 461 | 2.76e-75 | 239 |
MsG0480018736.01.T01 | MTR_4g017610 | 28.384 | 229 | 130 | 6 | 118 | 327 | 16 | 229 | 1.14e-11 | 65.9 |
MsG0480018736.01.T01 | MTR_4g019310 | 38.550 | 262 | 147 | 6 | 66 | 325 | 222 | 471 | 1.92e-44 | 159 |
MsG0480018736.01.T01 | MTR_4g019310 | 29.787 | 188 | 110 | 5 | 115 | 287 | 8 | 188 | 4.10e-12 | 67.4 |
MsG0480018736.01.T01 | MTR_7g066350 | 31.179 | 263 | 133 | 5 | 63 | 320 | 207 | 426 | 1.07e-26 | 109 |
MsG0480018736.01.T01 | MTR_7g066350 | 28.829 | 222 | 132 | 7 | 115 | 325 | 9 | 215 | 2.76e-11 | 64.7 |
MsG0480018736.01.T01 | MTR_7g066400 | 33.333 | 258 | 129 | 8 | 67 | 317 | 190 | 411 | 1.27e-26 | 109 |
MsG0480018736.01.T01 | MTR_7g066680 | 33.333 | 270 | 151 | 10 | 63 | 321 | 34 | 285 | 6.36e-25 | 103 |
MsG0480018736.01.T01 | MTR_4g019350 | 55.556 | 90 | 34 | 1 | 173 | 262 | 1 | 84 | 1.05e-24 | 96.3 |
MsG0480018736.01.T01 | MTR_1g041315 | 29.316 | 307 | 161 | 7 | 21 | 320 | 187 | 444 | 3.00e-24 | 103 |
MsG0480018736.01.T01 | MTR_7g066340 | 28.383 | 303 | 158 | 6 | 21 | 320 | 184 | 430 | 3.24e-24 | 102 |
MsG0480018736.01.T01 | MTR_7g066340 | 31.019 | 216 | 119 | 8 | 115 | 317 | 12 | 210 | 5.50e-14 | 72.8 |
MsG0480018736.01.T01 | MTR_7g058710 | 30.855 | 269 | 169 | 7 | 63 | 325 | 202 | 459 | 5.14e-24 | 102 |
MsG0480018736.01.T01 | MTR_7g058710 | 26.389 | 216 | 137 | 7 | 115 | 325 | 12 | 210 | 2.05e-11 | 65.1 |
MsG0480018736.01.T01 | MTR_7g066430 | 31.429 | 280 | 167 | 8 | 60 | 325 | 199 | 467 | 7.45e-24 | 102 |
MsG0480018736.01.T01 | MTR_7g066570 | 31.538 | 260 | 161 | 6 | 64 | 317 | 206 | 454 | 1.17e-22 | 99.0 |
MsG0480018736.01.T01 | MTR_7g066580 | 31.227 | 269 | 167 | 10 | 67 | 325 | 167 | 427 | 5.20e-22 | 96.3 |
MsG0480018736.01.T01 | MTR_7g066410 | 31.618 | 272 | 163 | 6 | 67 | 325 | 233 | 494 | 2.01e-21 | 95.1 |
MsG0480018736.01.T01 | MTR_7g066260 | 32.576 | 264 | 125 | 10 | 64 | 317 | 216 | 436 | 4.29e-20 | 91.3 |
MsG0480018736.01.T01 | MTR_7g066260 | 32.000 | 225 | 127 | 11 | 113 | 325 | 13 | 223 | 3.42e-12 | 67.4 |
MsG0480018736.01.T01 | MTR_7g063900 | 28.244 | 262 | 170 | 5 | 63 | 317 | 206 | 456 | 1.74e-19 | 89.4 |
MsG0480018736.01.T01 | MTR_7g063900 | 36.190 | 105 | 58 | 3 | 115 | 211 | 10 | 113 | 7.29e-12 | 66.2 |
MsG0480018736.01.T01 | MTR_7g066310 | 30.841 | 214 | 104 | 4 | 115 | 325 | 193 | 365 | 4.48e-18 | 84.7 |
MsG0480018736.01.T01 | MTR_7g066310 | 32.484 | 157 | 89 | 5 | 115 | 257 | 7 | 160 | 1.12e-11 | 65.5 |
MsG0480018736.01.T01 | MTR_7g012680 | 30.078 | 256 | 145 | 7 | 66 | 317 | 194 | 419 | 1.34e-17 | 83.6 |
MsG0480018736.01.T01 | MTR_7g066280 | 30.222 | 225 | 135 | 5 | 118 | 325 | 153 | 372 | 1.88e-17 | 82.8 |
MsG0480018736.01.T01 | MTR_8g445860 | 27.500 | 240 | 121 | 7 | 111 | 325 | 9 | 220 | 8.19e-17 | 79.0 |
MsG0480018736.01.T01 | MTR_7g062300 | 26.829 | 287 | 182 | 9 | 44 | 325 | 192 | 455 | 8.77e-17 | 81.3 |
MsG0480018736.01.T01 | MTR_7g062300 | 33.854 | 192 | 95 | 8 | 110 | 288 | 7 | 179 | 8.85e-15 | 75.1 |
MsG0480018736.01.T01 | MTR_7g063660 | 29.457 | 258 | 164 | 7 | 63 | 317 | 203 | 445 | 3.61e-16 | 79.3 |
MsG0480018736.01.T01 | MTR_7g063660 | 37.963 | 108 | 60 | 2 | 115 | 215 | 9 | 116 | 1.43e-14 | 74.7 |
MsG0480018736.01.T01 | MTR_7g062280 | 27.273 | 286 | 184 | 8 | 44 | 325 | 202 | 467 | 4.65e-16 | 79.0 |
MsG0480018736.01.T01 | MTR_7g062280 | 34.483 | 174 | 94 | 6 | 128 | 288 | 23 | 189 | 4.09e-12 | 67.0 |
MsG0480018736.01.T01 | MTR_7g063890 | 29.008 | 262 | 168 | 6 | 63 | 317 | 222 | 472 | 1.21e-15 | 77.8 |
MsG0480018736.01.T01 | MTR_7g063890 | 29.944 | 177 | 98 | 7 | 118 | 285 | 30 | 189 | 2.09e-11 | 65.1 |
MsG0480018736.01.T01 | MTR_7g066290 | 38.776 | 147 | 87 | 1 | 63 | 206 | 215 | 361 | 3.80e-15 | 76.3 |
MsG0480018736.01.T01 | MTR_1g115450 | 41.176 | 85 | 48 | 1 | 111 | 193 | 3 | 87 | 5.36e-15 | 71.6 |
MsG0480018736.01.T01 | MTR_7g058700 | 39.259 | 135 | 58 | 4 | 67 | 198 | 725 | 838 | 7.85e-15 | 75.9 |
MsG0480018736.01.T01 | MTR_7g063820 | 37.719 | 114 | 63 | 3 | 116 | 223 | 11 | 122 | 1.28e-14 | 74.7 |
MsG0480018736.01.T01 | MTR_0150s0030 | 35.849 | 106 | 59 | 3 | 110 | 212 | 3 | 102 | 2.98e-14 | 70.9 |
MsG0480018736.01.T01 | MTR_7g066360 | 32.319 | 263 | 120 | 11 | 63 | 317 | 211 | 423 | 5.16e-14 | 72.8 |
MsG0480018736.01.T01 | MTR_8g445910 | 36.792 | 106 | 58 | 3 | 110 | 212 | 3 | 102 | 7.36e-14 | 70.9 |
MsG0480018736.01.T01 | MTR_3g065200 | 31.683 | 202 | 111 | 6 | 128 | 325 | 225 | 403 | 1.41e-13 | 71.6 |
MsG0480018736.01.T01 | MTR_7g063830 | 31.250 | 176 | 108 | 3 | 63 | 232 | 206 | 374 | 1.55e-13 | 71.2 |
MsG0480018736.01.T01 | MTR_1g115455 | 38.372 | 86 | 51 | 1 | 110 | 193 | 4 | 89 | 2.76e-13 | 68.9 |
MsG0480018736.01.T01 | MTR_8g044880 | 36.792 | 106 | 58 | 3 | 110 | 212 | 3 | 102 | 5.86e-13 | 68.6 |
MsG0480018736.01.T01 | MTR_7g063840 | 25.660 | 265 | 176 | 7 | 63 | 325 | 204 | 449 | 1.02e-12 | 68.9 |
MsG0480018736.01.T01 | MTR_0150s0010 | 39.535 | 86 | 50 | 1 | 110 | 193 | 5 | 90 | 2.86e-12 | 65.9 |
MsG0480018736.01.T01 | MTR_7g063920 | 26.459 | 257 | 160 | 6 | 65 | 317 | 173 | 404 | 3.63e-12 | 67.4 |
MsG0480018736.01.T01 | MTR_7g063920 | 38.182 | 110 | 59 | 3 | 110 | 211 | 6 | 114 | 1.96e-11 | 65.1 |
MsG0480018736.01.T01 | MTR_7g063880 | 35.345 | 116 | 64 | 4 | 110 | 217 | 6 | 118 | 4.74e-12 | 67.0 |
MsG0480018736.01.T01 | MTR_7g063880 | 25.940 | 266 | 167 | 7 | 63 | 325 | 206 | 444 | 1.26e-11 | 65.5 |
MsG0480018736.01.T01 | MTR_8g445920 | 40.299 | 67 | 40 | 0 | 110 | 176 | 5 | 71 | 1.93e-11 | 60.5 |
MsG0480018736.01.T01 | MTR_8g044890 | 40.299 | 67 | 40 | 0 | 110 | 176 | 5 | 71 | 1.93e-11 | 60.5 |
MsG0480018736.01.T01 | MTR_1g115470 | 36.047 | 86 | 53 | 1 | 111 | 194 | 2 | 87 | 5.14e-11 | 63.5 |
MsG0480018736.01.T01 | MTR_7g066480 | 28.571 | 231 | 127 | 10 | 108 | 325 | 13 | 218 | 9.89e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018736.01.T01 | AT5G01130 | 26.994 | 326 | 184 | 11 | 6 | 325 | 149 | 426 | 1.62e-21 | 95.1 |
MsG0480018736.01.T01 | AT5G01120 | 31.022 | 274 | 159 | 9 | 65 | 325 | 215 | 471 | 3.10e-19 | 88.6 |
MsG0480018736.01.T01 | AT5G01140 | 30.882 | 272 | 146 | 12 | 66 | 325 | 192 | 433 | 1.62e-18 | 86.3 |
MsG0480018736.01.T01 | AT3G09140 | 27.907 | 301 | 181 | 11 | 37 | 325 | 199 | 475 | 4.01e-16 | 79.3 |
MsG0480018736.01.T01 | AT3G09140 | 28.846 | 208 | 130 | 8 | 110 | 302 | 4 | 208 | 1.65e-13 | 71.6 |
MsG0480018736.01.T01 | AT3G09140 | 28.364 | 275 | 162 | 10 | 63 | 325 | 252 | 503 | 1.31e-15 | 77.8 |
MsG0480018736.01.T01 | AT3G09140 | 28.846 | 208 | 130 | 8 | 110 | 302 | 4 | 208 | 1.97e-13 | 71.2 |
MsG0480018736.01.T01 | AT5G43240 | 29.181 | 281 | 156 | 10 | 65 | 325 | 74 | 331 | 1.54e-14 | 73.9 |
MsG0480018736.01.T01 | AT5G43240 | 28.076 | 317 | 169 | 12 | 45 | 325 | 182 | 475 | 3.40e-14 | 73.6 |
MsG0480018736.01.T01 | AT5G43240 | 29.469 | 207 | 110 | 8 | 116 | 302 | 10 | 200 | 8.86e-12 | 66.2 |
MsG0480018736.01.T01 | AT5G43240 | 28.076 | 317 | 169 | 12 | 45 | 325 | 182 | 475 | 3.40e-14 | 73.6 |
MsG0480018736.01.T01 | AT5G43240 | 29.469 | 207 | 110 | 8 | 116 | 302 | 10 | 200 | 8.86e-12 | 66.2 |
MsG0480018736.01.T01 | AT5G43240 | 28.076 | 317 | 169 | 12 | 45 | 325 | 182 | 475 | 3.40e-14 | 73.6 |
MsG0480018736.01.T01 | AT5G43240 | 29.469 | 207 | 110 | 8 | 116 | 302 | 10 | 200 | 8.86e-12 | 66.2 |
MsG0480018736.01.T01 | AT5G01150 | 27.372 | 274 | 161 | 9 | 66 | 325 | 212 | 461 | 6.53e-13 | 69.7 |
MsG0480018736.01.T01 | AT5G37320 | 28.253 | 269 | 153 | 11 | 66 | 325 | 224 | 461 | 2.31e-11 | 65.1 |
MsG0480018736.01.T01 | AT3G09120 | 27.982 | 218 | 144 | 5 | 115 | 325 | 6 | 217 | 6.45e-11 | 62.8 |
Find 88 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGACAAGTTGGGAGATTT+TGG | 0.140906 | 4:+9124503 | None:intergenic |
CCTGGCGCAGCACCACATTT+TGG | 0.210743 | 4:-9124707 | MsG0480018736.01.T01:CDS |
ACCATCTGAAAGCTTTAAAA+TGG | 0.212595 | 4:+9124823 | None:intergenic |
GACAAAGAGACCTCGGAATT+TGG | 0.216618 | 4:-9126026 | MsG0480018736.01.T01:CDS |
CACAAGTGGCGGCACTAAAA+TGG | 0.259934 | 4:-9124951 | MsG0480018736.01.T01:CDS |
CGTAGCAAAAGTGTACAATT+TGG | 0.285675 | 4:-9126509 | MsG0480018736.01.T01:CDS |
AGGCAGGTTGCCTTTGTACT+TGG | 0.329588 | 4:+9125009 | None:intergenic |
AGCTTCCTTACCATGCCATT+AGG | 0.332201 | 4:-9124848 | MsG0480018736.01.T01:CDS |
TTCAAAATTGTATTTGTCAT+AGG | 0.339563 | 4:+9125040 | None:intergenic |
TGTCAGACGCTCCTCCAAAT+TGG | 0.345543 | 4:-9126567 | MsG0480018736.01.T01:CDS |
GCTTCCTTACCATGCCATTA+GGG | 0.353748 | 4:-9124847 | MsG0480018736.01.T01:CDS |
CTCTAACGGCTGATGAAGAT+TGG | 0.361391 | 4:+9124984 | None:intergenic |
TCAGATGGTAACTCGTTTGC+TGG | 0.365227 | 4:-9124809 | MsG0480018736.01.T01:CDS |
GTTGCGGGCGGTCGTAAATC+AGG | 0.366748 | 4:+9124659 | None:intergenic |
GAATTTGGATTCCGAGGGTC+AGG | 0.369351 | 4:-9126011 | MsG0480018736.01.T01:CDS |
CCGCCCGCAACATATTATTA+TGG | 0.379537 | 4:-9124647 | MsG0480018736.01.T01:CDS |
GGAATGTTGAGGGGCTGGTT+TGG | 0.384748 | 4:+9124680 | None:intergenic |
CTCATCGTAGCCCGATTTGA+TGG | 0.385925 | 4:+9126486 | None:intergenic |
TGTCCCATCGTGCTCCAATT+TGG | 0.391113 | 4:+9126553 | None:intergenic |
TACAATTTGGCCATCAAATC+GGG | 0.401973 | 4:-9126496 | MsG0480018736.01.T01:CDS |
AACTCGTTTGCTGGATGTAT+TGG | 0.424872 | 4:-9124800 | MsG0480018736.01.T01:CDS |
AAATTCCGAGGTCTCTTTGT+CGG | 0.432465 | 4:+9126028 | None:intergenic |
GTACAATTTGGCCATCAAAT+CGG | 0.435648 | 4:-9126497 | MsG0480018736.01.T01:CDS |
CCAAAATGTGGTGCTGCGCC+AGG | 0.440390 | 4:+9124707 | None:intergenic |
GTACCATAATAATATGTTGC+GGG | 0.440914 | 4:+9124644 | None:intergenic |
CTCCACTTCAAGATCATCAA+TGG | 0.442551 | 4:+9124364 | None:intergenic |
CGCACTGTGTTACTCAATCC+TGG | 0.461909 | 4:-9124725 | MsG0480018736.01.T01:CDS |
GATAAGCATTGGTGAATTTG+AGG | 0.462994 | 4:-9124339 | MsG0480018736.01.T01:CDS |
CGGCACTAAAATGGATGTTA+AGG | 0.464791 | 4:-9124942 | MsG0480018736.01.T01:CDS |
GTGCAGAGACTAGCATTGTA+TGG | 0.467656 | 4:-9124461 | MsG0480018736.01.T01:CDS |
CCGCCTTCCCTTGACAAGTT+GGG | 0.467668 | 4:+9124494 | None:intergenic |
AGACTAGCATTGTATGGTAT+AGG | 0.468200 | 4:-9124455 | MsG0480018736.01.T01:CDS |
GTACAAGAGTGTGGAGAACT+TGG | 0.471755 | 4:-9124771 | MsG0480018736.01.T01:CDS |
AATCAGGAATGTTGAGGGGC+TGG | 0.489501 | 4:+9124675 | None:intergenic |
AGCTTTAAAATGGACCCTAA+TGG | 0.492701 | 4:+9124833 | None:intergenic |
ACCGCCTTCCCTTGACAAGT+TGG | 0.507948 | 4:+9124493 | None:intergenic |
AGGTTAAGCTATACTTGAGT+AGG | 0.508695 | 4:+9125071 | None:intergenic |
ACCTCGGAATTTGGATTCCG+AGG | 0.510244 | 4:-9126017 | MsG0480018736.01.T01:CDS |
CCCATCGTGCTCCAATTTGG+AGG | 0.521054 | 4:+9126556 | None:intergenic |
CAAAATCTCCCAACTTGTCA+AGG | 0.521464 | 4:-9124502 | MsG0480018736.01.T01:CDS |
TTGTCAAGGGAAGGCGGTGT+GGG | 0.525762 | 4:-9124488 | MsG0480018736.01.T01:CDS |
CCTCCAAATTGGAGCACGAT+GGG | 0.526231 | 4:-9126556 | MsG0480018736.01.T01:CDS |
TACGTTTGAAGTAAAGATAG+AGG | 0.528667 | 4:-9124588 | MsG0480018736.01.T01:CDS |
GGTAATAGTACTAGTGTGGA+TGG | 0.536993 | 4:-9125989 | MsG0480018736.01.T01:CDS |
TCCACTTCAAGATCATCAAT+GGG | 0.538387 | 4:+9124365 | None:intergenic |
CTGATGAAGATTGGTTAGGC+AGG | 0.539982 | 4:+9124993 | None:intergenic |
ACGGCTGATGAAGATTGGTT+AGG | 0.542485 | 4:+9124989 | None:intergenic |
TCGTAAATCAGGAATGTTGA+GGG | 0.544479 | 4:+9124670 | None:intergenic |
ATAATTCTTTCAAATATACA+AGG | 0.564110 | 4:+9124393 | None:intergenic |
CAAATCGGGCTACGATGAGA+AGG | 0.569509 | 4:-9126482 | MsG0480018736.01.T01:CDS |
TCCCATTGATGATCTTGAAG+TGG | 0.570161 | 4:-9124366 | MsG0480018736.01.T01:CDS |
CTTGTCAAGGGAAGGCGGTG+TGG | 0.575577 | 4:-9124489 | MsG0480018736.01.T01:CDS |
AGAGTAAAACCTTGCACAAG+TGG | 0.576824 | 4:-9124965 | MsG0480018736.01.T01:CDS |
TGGACCCTAATGGCATGGTA+AGG | 0.578120 | 4:+9124843 | None:intergenic |
TCAGGGTAATAGTACTAGTG+TGG | 0.581620 | 4:-9125993 | MsG0480018736.01.T01:CDS |
ATTTGGAGGAGCGTCTGACA+TGG | 0.584953 | 4:+9126570 | None:intergenic |
TTAGTGCCGCCACTTGTGCA+AGG | 0.589354 | 4:+9124956 | None:intergenic |
TGGCAATTTGTACAAGAGTG+TGG | 0.591892 | 4:-9124780 | MsG0480018736.01.T01:CDS |
CCTCGGAATTTGGATTCCGA+GGG | 0.592288 | 4:-9126016 | MsG0480018736.01.T01:CDS |
AGTACTATTACCCTGACCCT+CGG | 0.595128 | 4:+9126000 | None:intergenic |
TAAAATGGACCCTAATGGCA+TGG | 0.595393 | 4:+9124838 | None:intergenic |
TTTGAAGTAAAGATAGAGGG+AGG | 0.598835 | 4:-9124584 | MsG0480018736.01.T01:CDS |
AAAATCTCCCAACTTGTCAA+GGG | 0.599820 | 4:-9124501 | MsG0480018736.01.T01:CDS |
TCTCCCAACTTGTCAAGGGA+AGG | 0.600220 | 4:-9124497 | MsG0480018736.01.T01:CDS |
GCATTGGTGAATTTGAGGTA+TGG | 0.605452 | 4:-9124334 | MsG0480018736.01.T01:CDS |
GTCGTAAATCAGGAATGTTG+AGG | 0.607776 | 4:+9124669 | None:intergenic |
GAAGTCAACAAAATCACCGT+TGG | 0.609986 | 4:+9124877 | None:intergenic |
CTTCAAGATCATCAATGGGA+AGG | 0.610347 | 4:+9124369 | None:intergenic |
TCCTCCAAATTGGAGCACGA+TGG | 0.615825 | 4:-9126557 | MsG0480018736.01.T01:CDS |
TTGGTGAATTTGAGGTATGG+TGG | 0.617870 | 4:-9124331 | MsG0480018736.01.T01:CDS |
CGGGCTACGATGAGAAGGAT+CGG | 0.618419 | 4:-9126477 | MsG0480018736.01.T01:CDS |
CCCAACTTGTCAAGGGAAGG+CGG | 0.621164 | 4:-9124494 | MsG0480018736.01.T01:CDS |
CCCTCGGAATCCAAATTCCG+AGG | 0.624583 | 4:+9126016 | None:intergenic |
GGAGCACGATGGGACACCAT+CGG | 0.629252 | 4:-9126546 | MsG0480018736.01.T01:CDS |
AAAAGTAGCTCCAAGTACAA+AGG | 0.632301 | 4:-9125019 | MsG0480018736.01.T01:CDS |
ACGTTTGAAGTAAAGATAGA+GGG | 0.638925 | 4:-9124587 | MsG0480018736.01.T01:CDS |
AATTTGGATTCCGAGGGTCA+GGG | 0.646453 | 4:-9126010 | MsG0480018736.01.T01:CDS |
CATTGATGATCTTGAAGTGG+AGG | 0.646684 | 4:-9124363 | MsG0480018736.01.T01:CDS |
ATTTGTCATAGGCTCGTGAG+AGG | 0.647045 | 4:+9125051 | None:intergenic |
ATCATCTTTGTAGAAGCCAA+CGG | 0.648266 | 4:-9124893 | MsG0480018736.01.T01:CDS |
GTAAAACCTTGCACAAGTGG+CGG | 0.651940 | 4:-9124962 | MsG0480018736.01.T01:CDS |
GAAAACCGACAAAGAGACCT+CGG | 0.653928 | 4:-9126033 | MsG0480018736.01.T01:CDS |
GAAGTGGAGGTGATAAGCAT+TGG | 0.663142 | 4:-9124350 | MsG0480018736.01.T01:CDS |
GTGGATGGATGCTCAAAATG+AGG | 0.666637 | 4:-9125974 | MsG0480018736.01.T01:intron |
TGTACCATAATAATATGTTG+CGG | 0.667161 | 4:+9124643 | None:intergenic |
TGGTTTGGACAACCAAAATG+TGG | 0.677088 | 4:+9124695 | None:intergenic |
CGTAAATCAGGAATGTTGAG+GGG | 0.681609 | 4:+9124671 | None:intergenic |
CCATAATAATATGTTGCGGG+CGG | 0.691477 | 4:+9124647 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATAATTTGAAGAAAA+AGG | - | Chr4:9125597-9125616 | MsG0480018736.01.T01:intron | 10.0% |
!!! | TGTTTATTTTACAAAAATAA+AGG | + | Chr4:9125248-9125267 | None:intergenic | 10.0% |
!! | ATAATTCTTTCAAATATACA+AGG | + | Chr4:9126491-9126510 | None:intergenic | 15.0% |
!! | TTAAAATATAGGGAAAAATT+CGG | + | Chr4:9125345-9125364 | None:intergenic | 15.0% |
!!! | ACATTTAATTGATATTTTGA+AGG | - | Chr4:9125388-9125407 | MsG0480018736.01.T01:intron | 15.0% |
!!! | CATTTAATTGATATTTTGAA+GGG | - | Chr4:9125389-9125408 | MsG0480018736.01.T01:intron | 15.0% |
!! | AAAAAAAAACTAGATGAAAG+AGG | + | Chr4:9125708-9125727 | None:intergenic | 20.0% |
!! | AATTAATAAAATGTGCAACA+TGG | + | Chr4:9125624-9125643 | None:intergenic | 20.0% |
!! | ATATGAAAGTAAAAGGTTAT+GGG | + | Chr4:9125154-9125173 | None:intergenic | 20.0% |
!! | TAAAATATAGGGAAAAATTC+GGG | + | Chr4:9125344-9125363 | None:intergenic | 20.0% |
!! | TAAGATCATATGAAAGTAAA+AGG | + | Chr4:9125161-9125180 | None:intergenic | 20.0% |
!! | TTCAAAATTGTATTTGTCAT+AGG | + | Chr4:9125844-9125863 | None:intergenic | 20.0% |
!!! | TATTGTCATTTGTTTACATT+GGG | + | Chr4:9125475-9125494 | None:intergenic | 20.0% |
!!! | TGTTGCACATTTTATTAATT+TGG | - | Chr4:9125624-9125643 | MsG0480018736.01.T01:intron | 20.0% |
!!! | TTATTGTCATTTGTTTACAT+TGG | + | Chr4:9125476-9125495 | None:intergenic | 20.0% |
!!! | TTATTGTCATTTGTTTGTTT+TGG | + | Chr4:9125532-9125551 | None:intergenic | 20.0% |
! | AAACATTATAGAATAAGCAG+AGG | - | Chr4:9125563-9125582 | MsG0480018736.01.T01:intron | 25.0% |
! | AAATATCAATTAAATGTCGC+TGG | + | Chr4:9125385-9125404 | None:intergenic | 25.0% |
! | ACATAACATCAAATGATGTT+TGG | - | Chr4:9124659-9124678 | MsG0480018736.01.T01:CDS | 25.0% |
! | AGAAGAATTGGAAAATTGAT+AGG | + | Chr4:9125732-9125751 | None:intergenic | 25.0% |
! | CAATATTATAATCACAACTG+TGG | + | Chr4:9125278-9125297 | None:intergenic | 25.0% |
! | CATATGAAAGTAAAAGGTTA+TGG | + | Chr4:9125155-9125174 | None:intergenic | 25.0% |
! | TATGAAAGTAAAAGGTTATG+GGG | + | Chr4:9125153-9125172 | None:intergenic | 25.0% |
! | TGTACCATAATAATATGTTG+CGG | + | Chr4:9126241-9126260 | None:intergenic | 25.0% |
!! | ACTTTTGCTACGTAAAAAAT+CGG | + | Chr4:9124364-9124383 | None:intergenic | 25.0% |
!! | CAAGAGTTTTGCATTAAAAA+TGG | + | Chr4:9126346-9126365 | None:intergenic | 25.0% |
!! | TCATCAAAATTGTTCTTTTC+TGG | - | Chr4:9124451-9124470 | MsG0480018736.01.T01:CDS | 25.0% |
!!! | AGAACAATTTTGATGATTCA+TGG | + | Chr4:9124447-9124466 | None:intergenic | 25.0% |
ACTAACTGATGTATCCTAAA+GGG | + | Chr4:9125313-9125332 | None:intergenic | 30.0% | |
ATGAAAGTAAAAGGTTATGG+GGG | + | Chr4:9125152-9125171 | None:intergenic | 30.0% | |
ATTTGATGTTATGTCTTGGA+CGG | + | Chr4:9124653-9124672 | None:intergenic | 30.0% | |
CATCATTTGATGTTATGTCT+TGG | + | Chr4:9124657-9124676 | None:intergenic | 30.0% | |
GGAAAAAACTTGAAATCCTT+GGG | - | Chr4:9125645-9125664 | MsG0480018736.01.T01:intron | 30.0% | |
GTACCATAATAATATGTTGC+GGG | + | Chr4:9126240-9126259 | None:intergenic | 30.0% | |
TAGTGAACTTGAAACAAGAA+TGG | + | Chr4:9124801-9124820 | None:intergenic | 30.0% | |
TGGAAAAAACTTGAAATCCT+TGG | - | Chr4:9125644-9125663 | MsG0480018736.01.T01:intron | 30.0% | |
TTCAGATTTGACTCAATTAG+AGG | - | Chr4:9125057-9125076 | MsG0480018736.01.T01:CDS | 30.0% | |
! | ACGTTTGAAGTAAAGATAGA+GGG | - | Chr4:9126294-9126313 | MsG0480018736.01.T01:intron | 30.0% |
! | AGAAAATGGTTCAACCTTTT+TGG | - | Chr4:9124940-9124959 | MsG0480018736.01.T01:CDS | 30.0% |
! | CAATTTTCCAATTCTTCTCT+TGG | - | Chr4:9125734-9125753 | MsG0480018736.01.T01:intron | 30.0% |
! | GAGGTATTTCTTAGAGAAAA+TGG | - | Chr4:9124926-9124945 | MsG0480018736.01.T01:CDS | 30.0% |
! | TACGTTTGAAGTAAAGATAG+AGG | - | Chr4:9126293-9126312 | MsG0480018736.01.T01:intron | 30.0% |
! | TATTTGAAGTTGTCTAGGAA+TGG | + | Chr4:9124619-9124638 | None:intergenic | 30.0% |
! | TTGGTCATTGTTATTGTTGT+TGG | + | Chr4:9124566-9124585 | None:intergenic | 30.0% |
!! | AATTGATATTTTGAAGGGCA+TGG | - | Chr4:9125394-9125413 | MsG0480018736.01.T01:intron | 30.0% |
!! | ACCATCTGAAAGCTTTAAAA+TGG | + | Chr4:9126061-9126080 | None:intergenic | 30.0% |
!! | AGAGTTGTTGATGTTTTTGT+TGG | + | Chr4:9124585-9124604 | None:intergenic | 30.0% |
!! | ATGTATTTCTAGTTGAGTTC+AGG | + | Chr4:9124498-9124517 | None:intergenic | 30.0% |
!! | TTACATTGGGTTGAAATACA+AGG | + | Chr4:9125462-9125481 | None:intergenic | 30.0% |
!!! | TCCATTTTAAAGCTTTCAGA+TGG | - | Chr4:9126057-9126076 | MsG0480018736.01.T01:intron | 30.0% |
AAAAGTAGCTCCAAGTACAA+AGG | - | Chr4:9125862-9125881 | MsG0480018736.01.T01:intron | 35.0% | |
AAAATCTCCCAACTTGTCAA+GGG | - | Chr4:9126380-9126399 | MsG0480018736.01.T01:intron | 35.0% | |
AATAACCCAATTCCTTCAAC+AGG | + | Chr4:9125039-9125058 | None:intergenic | 35.0% | |
AGAAAGAGTAGAAACATGCT+AGG | - | Chr4:9125495-9125514 | MsG0480018736.01.T01:intron | 35.0% | |
AGACTAGCATTGTATGGTAT+AGG | - | Chr4:9126426-9126445 | MsG0480018736.01.T01:intron | 35.0% | |
AGGTTAAGCTATACTTGAGT+AGG | + | Chr4:9125813-9125832 | None:intergenic | 35.0% | |
ATCATCTTTGTAGAAGCCAA+CGG | - | Chr4:9125988-9126007 | MsG0480018736.01.T01:CDS | 35.0% | |
CACTAACTGATGTATCCTAA+AGG | + | Chr4:9125314-9125333 | None:intergenic | 35.0% | |
GTACAATTTGGCCATCAAAT+CGG | - | Chr4:9124384-9124403 | MsG0480018736.01.T01:CDS | 35.0% | |
TACAATTTGGCCATCAAATC+GGG | - | Chr4:9124385-9124404 | MsG0480018736.01.T01:CDS | 35.0% | |
TCCACTTCAAGATCATCAAT+GGG | + | Chr4:9126519-9126538 | None:intergenic | 35.0% | |
TCGTAAATCAGGAATGTTGA+GGG | + | Chr4:9126214-9126233 | None:intergenic | 35.0% | |
TTTGAAGATTGTGCCAAGTT+CGG | - | Chr4:9124993-9125012 | MsG0480018736.01.T01:CDS | 35.0% | |
! | CGTAGCAAAAGTGTACAATT+TGG | - | Chr4:9124372-9124391 | MsG0480018736.01.T01:CDS | 35.0% |
! | GTCATTGTTATTGTTGTTGG+TGG | + | Chr4:9124563-9124582 | None:intergenic | 35.0% |
! | GTTTTCAACTAGAGCAACAA+AGG | + | Chr4:9124834-9124853 | None:intergenic | 35.0% |
! | TGTGCAAGGTTTTACTCTAA+CGG | + | Chr4:9125914-9125933 | None:intergenic | 35.0% |
! | TTTGAAGTAAAGATAGAGGG+AGG | - | Chr4:9126297-9126316 | MsG0480018736.01.T01:intron | 35.0% |
!! | AGAGGTATTTGAAGTTGTCT+AGG | + | Chr4:9124624-9124643 | None:intergenic | 35.0% |
!! | AGCTTTAAAATGGACCCTAA+TGG | + | Chr4:9126051-9126070 | None:intergenic | 35.0% |
!! | GATAAGCATTGGTGAATTTG+AGG | - | Chr4:9126542-9126561 | MsG0480018736.01.T01:CDS | 35.0% |
AAATTCCGAGGTCTCTTTGT+CGG | + | Chr4:9124856-9124875 | None:intergenic | 40.0% | |
AACAAATGTTGCTGCATCCT+AGG | - | Chr4:9124698-9124717 | MsG0480018736.01.T01:CDS | 40.0% | |
AATCTCGTCGAACACCAAAA+AGG | + | Chr4:9124957-9124976 | None:intergenic | 40.0% | |
ACTGTGCATGAAGTTGTTCT+TGG | - | Chr4:9124735-9124754 | MsG0480018736.01.T01:CDS | 40.0% | |
ACTTGAAATCCTTGGGTGAA+TGG | - | Chr4:9125652-9125671 | MsG0480018736.01.T01:intron | 40.0% | |
AGAGTAAAACCTTGCACAAG+TGG | - | Chr4:9125916-9125935 | MsG0480018736.01.T01:intron | 40.0% | |
AGCAACATTTGTTTGCAGAC+AGG | + | Chr4:9124691-9124710 | None:intergenic | 40.0% | |
AGTGATTCACATGGATTCCT+AGG | + | Chr4:9124718-9124737 | None:intergenic | 40.0% | |
ATGTTATGTCTTGGACGGTT+TGG | + | Chr4:9124648-9124667 | None:intergenic | 40.0% | |
CAAAATCTCCCAACTTGTCA+AGG | - | Chr4:9126379-9126398 | MsG0480018736.01.T01:intron | 40.0% | |
CCATAATAATATGTTGCGGG+CGG | + | Chr4:9126237-9126256 | None:intergenic | 40.0% | |
CGGCACTAAAATGGATGTTA+AGG | - | Chr4:9125939-9125958 | MsG0480018736.01.T01:intron | 40.0% | |
CGTAAATCAGGAATGTTGAG+GGG | + | Chr4:9126213-9126232 | None:intergenic | 40.0% | |
CTAGTTGAGTTCAGGTGTTT+CGG | + | Chr4:9124490-9124509 | None:intergenic | 40.0% | |
CTCCACTTCAAGATCATCAA+TGG | + | Chr4:9126520-9126539 | None:intergenic | 40.0% | |
CTTCAAGATCATCAATGGGA+AGG | + | Chr4:9126515-9126534 | None:intergenic | 40.0% | |
GAACTAGCCAAGAGAAGAAT+TGG | + | Chr4:9125744-9125763 | None:intergenic | 40.0% | |
GAAGTCAACAAAATCACCGT+TGG | + | Chr4:9126007-9126026 | None:intergenic | 40.0% | |
GAGGAAATCACACACAACAT+TGG | - | Chr4:9125076-9125095 | MsG0480018736.01.T01:CDS | 40.0% | |
GCAACATTTGTTTGCAGACA+GGG | + | Chr4:9124690-9124709 | None:intergenic | 40.0% | |
GGTAATAGTACTAGTGTGGA+TGG | - | Chr4:9124892-9124911 | MsG0480018736.01.T01:CDS | 40.0% | |
GTCGTAAATCAGGAATGTTG+AGG | + | Chr4:9126215-9126234 | None:intergenic | 40.0% | |
TAAAATGGACCCTAATGGCA+TGG | + | Chr4:9126046-9126065 | None:intergenic | 40.0% | |
TAGAAGAAACCATTCACCCA+AGG | + | Chr4:9125664-9125683 | None:intergenic | 40.0% | |
TCAGGGTAATAGTACTAGTG+TGG | - | Chr4:9124888-9124907 | MsG0480018736.01.T01:CDS | 40.0% | |
TGGCAATTTGTACAAGAGTG+TGG | - | Chr4:9126101-9126120 | MsG0480018736.01.T01:intron | 40.0% | |
TTCATGCACAGTGATTCACA+TGG | + | Chr4:9124727-9124746 | None:intergenic | 40.0% | |
! | AACTCGTTTGCTGGATGTAT+TGG | - | Chr4:9126081-9126100 | MsG0480018736.01.T01:intron | 40.0% |
! | CATTGATGATCTTGAAGTGG+AGG | - | Chr4:9126518-9126537 | MsG0480018736.01.T01:CDS | 40.0% |
! | GCATTGGTGAATTTGAGGTA+TGG | - | Chr4:9126547-9126566 | MsG0480018736.01.T01:CDS | 40.0% |
! | TCCCATTGATGATCTTGAAG+TGG | - | Chr4:9126515-9126534 | MsG0480018736.01.T01:CDS | 40.0% |
! | TGGTTTGGACAACCAAAATG+TGG | + | Chr4:9126189-9126208 | None:intergenic | 40.0% |
! | TTGGTGAATTTGAGGTATGG+TGG | - | Chr4:9126550-9126569 | MsG0480018736.01.T01:CDS | 40.0% |
!! | AACCGCAACTTTAAAGCATG+AGG | + | Chr4:9125215-9125234 | None:intergenic | 40.0% |
!! | CACCTCATGCTTTAAAGTTG+CGG | - | Chr4:9125210-9125229 | MsG0480018736.01.T01:intron | 40.0% |
!! | CTTGACAAGTTGGGAGATTT+TGG | + | Chr4:9126381-9126400 | None:intergenic | 40.0% |
!!! | TGGTGTTCGACGAGATTTTT+TGG | - | Chr4:9124960-9124979 | MsG0480018736.01.T01:CDS | 40.0% |
AATTTGGATTCCGAGGGTCA+GGG | - | Chr4:9124871-9124890 | MsG0480018736.01.T01:CDS | 45.0% | |
ACACAACATTGGCAAGCAAG+AGG | - | Chr4:9125087-9125106 | MsG0480018736.01.T01:intron | 45.0% | |
AGCTTCCTTACCATGCCATT+AGG | - | Chr4:9126033-9126052 | MsG0480018736.01.T01:CDS | 45.0% | |
AGTACTATTACCCTGACCCT+CGG | + | Chr4:9124884-9124903 | None:intergenic | 45.0% | |
ATTTGTCATAGGCTCGTGAG+AGG | + | Chr4:9125833-9125852 | None:intergenic | 45.0% | |
CCGCCCGCAACATATTATTA+TGG | - | Chr4:9126234-9126253 | MsG0480018736.01.T01:intron | 45.0% | |
CGTAAAAAATCGGACTCCGA+TGG | + | Chr4:9124354-9124373 | None:intergenic | 45.0% | |
CTCTAACGGCTGATGAAGAT+TGG | + | Chr4:9125900-9125919 | None:intergenic | 45.0% | |
GAAAACCGACAAAGAGACCT+CGG | - | Chr4:9124848-9124867 | MsG0480018736.01.T01:CDS | 45.0% | |
GAAGTGGAGGTGATAAGCAT+TGG | - | Chr4:9126531-9126550 | MsG0480018736.01.T01:CDS | 45.0% | |
GACAAAGAGACCTCGGAATT+TGG | - | Chr4:9124855-9124874 | MsG0480018736.01.T01:CDS | 45.0% | |
GCTTCCTTACCATGCCATTA+GGG | - | Chr4:9126034-9126053 | MsG0480018736.01.T01:CDS | 45.0% | |
GTAAAACCTTGCACAAGTGG+CGG | - | Chr4:9125919-9125938 | MsG0480018736.01.T01:intron | 45.0% | |
GTGCAGAGACTAGCATTGTA+TGG | - | Chr4:9126420-9126439 | MsG0480018736.01.T01:intron | 45.0% | |
GTGGATGGATGCTCAAAATG+AGG | - | Chr4:9124907-9124926 | MsG0480018736.01.T01:CDS | 45.0% | |
TACGTAGTCATAGCCGAACT+TGG | + | Chr4:9125009-9125028 | None:intergenic | 45.0% | |
TCAGATGGTAACTCGTTTGC+TGG | - | Chr4:9126072-9126091 | MsG0480018736.01.T01:intron | 45.0% | |
TGCAGTATGCTTCACCCTTT+AGG | - | Chr4:9125296-9125315 | MsG0480018736.01.T01:intron | 45.0% | |
TTGCGCCTGTTGAAGGAATT+GGG | - | Chr4:9125031-9125050 | MsG0480018736.01.T01:CDS | 45.0% | |
! | ACGGCTGATGAAGATTGGTT+AGG | + | Chr4:9125895-9125914 | None:intergenic | 45.0% |
! | CTGATGAAGATTGGTTAGGC+AGG | + | Chr4:9125891-9125910 | None:intergenic | 45.0% |
! | GTACAAGAGTGTGGAGAACT+TGG | - | Chr4:9126110-9126129 | MsG0480018736.01.T01:intron | 45.0% |
!! | GTTGGTGGATTGATGACACT+AGG | + | Chr4:9124548-9124567 | None:intergenic | 45.0% |
!!! | AAATTTGAAATTTAAAATAT+AGG | + | Chr4:9125356-9125375 | None:intergenic | 5.0% |
!!! | AATTTGAAATTTAAAATATA+GGG | + | Chr4:9125355-9125374 | None:intergenic | 5.0% |
AATCAGGAATGTTGAGGGGC+TGG | + | Chr4:9126209-9126228 | None:intergenic | 50.0% | |
ACCTCGGAATTTGGATTCCG+AGG | - | Chr4:9124864-9124883 | MsG0480018736.01.T01:CDS | 50.0% | |
AGGCAGGTTGCCTTTGTACT+TGG | + | Chr4:9125875-9125894 | None:intergenic | 50.0% | |
CAAATCGGGCTACGATGAGA+AGG | - | Chr4:9124399-9124418 | MsG0480018736.01.T01:CDS | 50.0% | |
CAATTCCTTCAACAGGCGCA+AGG | + | Chr4:9125032-9125051 | None:intergenic | 50.0% | |
CACAAGTGGCGGCACTAAAA+TGG | - | Chr4:9125930-9125949 | MsG0480018736.01.T01:intron | 50.0% | |
CCTCCAAATTGGAGCACGAT+GGG | - | Chr4:9124325-9124344 | MsG0480018736.01.T01:CDS | 50.0% | |
CCTCGGAATTTGGATTCCGA+GGG | - | Chr4:9124865-9124884 | MsG0480018736.01.T01:CDS | 50.0% | |
CTTGCGCCTGTTGAAGGAAT+TGG | - | Chr4:9125030-9125049 | MsG0480018736.01.T01:CDS | 50.0% | |
GAATTTGGATTCCGAGGGTC+AGG | - | Chr4:9124870-9124889 | MsG0480018736.01.T01:CDS | 50.0% | |
TCCTCCAAATTGGAGCACGA+TGG | - | Chr4:9124324-9124343 | MsG0480018736.01.T01:CDS | 50.0% | |
TCTCCCAACTTGTCAAGGGA+AGG | - | Chr4:9126384-9126403 | MsG0480018736.01.T01:intron | 50.0% | |
TGGACCCTAATGGCATGGTA+AGG | + | Chr4:9126041-9126060 | None:intergenic | 50.0% | |
TGTCAGACGCTCCTCCAAAT+TGG | - | Chr4:9124314-9124333 | MsG0480018736.01.T01:CDS | 50.0% | |
TGTCCCATCGTGCTCCAATT+TGG | + | Chr4:9124331-9124350 | None:intergenic | 50.0% | |
! | CGCACTGTGTTACTCAATCC+TGG | - | Chr4:9126156-9126175 | MsG0480018736.01.T01:intron | 50.0% |
! | CTCATCGTAGCCCGATTTGA+TGG | + | Chr4:9124398-9124417 | None:intergenic | 50.0% |
!! | TGTCTTGGACGGTTTGGTAG+AGG | + | Chr4:9124642-9124661 | None:intergenic | 50.0% |
ACCGCCTTCCCTTGACAAGT+TGG | + | Chr4:9126391-9126410 | None:intergenic | 55.0% | |
ACGTACCTTGCGCCTGTTGA+AGG | - | Chr4:9125024-9125043 | MsG0480018736.01.T01:CDS | 55.0% | |
CCCAACTTGTCAAGGGAAGG+CGG | - | Chr4:9126387-9126406 | MsG0480018736.01.T01:intron | 55.0% | |
CCCATCGTGCTCCAATTTGG+AGG | + | Chr4:9124328-9124347 | None:intergenic | 55.0% | |
CCCTCGGAATCCAAATTCCG+AGG | + | Chr4:9124868-9124887 | None:intergenic | 55.0% | |
CCGCCTTCCCTTGACAAGTT+GGG | + | Chr4:9126390-9126409 | None:intergenic | 55.0% | |
CGGGCTACGATGAGAAGGAT+CGG | - | Chr4:9124404-9124423 | MsG0480018736.01.T01:CDS | 55.0% | |
TTAGTGCCGCCACTTGTGCA+AGG | + | Chr4:9125928-9125947 | None:intergenic | 55.0% | |
TTGTCAAGGGAAGGCGGTGT+GGG | - | Chr4:9126393-9126412 | MsG0480018736.01.T01:intron | 55.0% | |
!! | GGAATGTTGAGGGGCTGGTT+TGG | + | Chr4:9126204-9126223 | None:intergenic | 55.0% |
CTTGTCAAGGGAAGGCGGTG+TGG | - | Chr4:9126392-9126411 | MsG0480018736.01.T01:intron | 60.0% | |
GGAGCACGATGGGACACCAT+CGG | - | Chr4:9124335-9124354 | MsG0480018736.01.T01:CDS | 60.0% | |
GTTGCGGGCGGTCGTAAATC+AGG | + | Chr4:9126225-9126244 | None:intergenic | 60.0% | |
! | CCTGGCGCAGCACCACATTT+TGG | - | Chr4:9126174-9126193 | MsG0480018736.01.T01:intron | 60.0% |
!! | CCAAAATGTGGTGCTGCGCC+AGG | + | Chr4:9126177-9126196 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 9124313 | 9126590 | 9124313 | ID=MsG0480018736.01;Name=MsG0480018736.01 |
Chr4 | mRNA | 9124313 | 9126590 | 9124313 | ID=MsG0480018736.01.T01;Parent=MsG0480018736.01;Name=MsG0480018736.01.T01;_AED=0.53;_eAED=0.57;_QI=0|0|0|0.66|1|1|3|0|328 |
Chr4 | exon | 9126476 | 9126590 | 9126476 | ID=MsG0480018736.01.T01:exon:2240;Parent=MsG0480018736.01.T01 |
Chr4 | exon | 9125975 | 9126057 | 9125975 | ID=MsG0480018736.01.T01:exon:2239;Parent=MsG0480018736.01.T01 |
Chr4 | exon | 9124313 | 9125101 | 9124313 | ID=MsG0480018736.01.T01:exon:2238;Parent=MsG0480018736.01.T01 |
Chr4 | CDS | 9126476 | 9126590 | 9126476 | ID=MsG0480018736.01.T01:cds;Parent=MsG0480018736.01.T01 |
Chr4 | CDS | 9125975 | 9126057 | 9125975 | ID=MsG0480018736.01.T01:cds;Parent=MsG0480018736.01.T01 |
Chr4 | CDS | 9124313 | 9125101 | 9124313 | ID=MsG0480018736.01.T01:cds;Parent=MsG0480018736.01.T01 |
Gene Sequence |
Protein sequence |