AlfalfaGEDB | MsG0480019510.01

M. sativa cultivar ZhongmuNo.1 / MsG0480019510.01

KEGG: K22588
GO: GO:0008168 GO:0008171 GO:0046983
PFAM: PF00891 PF08100

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019510.01.T01	XP_024636997.1	95.041	363	18	0	1	363	1	363	0	683

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019510.01.T01	O24305	74.38	363	90	2	1	363	1	360	0	562

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019510.01.T01	Q06YR0	94.766	363	19	0	1	363	1	363	0.0	682

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180001497.01	MsG0480019510.01	0.827068	1.918367e-54	1.832097e-51
MsG0180006191.01	MsG0480019510.01	0.811313	7.453221e-51	4.598117e-48
MsG0380012900.01	MsG0480019510.01	0.804601	1.997572e-49	1.034278e-46
MsG0380013415.01	MsG0480019510.01	0.802482	5.493463e-49	2.693974e-46
MsG0480019510.01	MsG0480019533.01	0.802801	4.721864e-49	2.334577e-46
MsG0480019510.01	MsG0480019545.01	0.802661	5.046447e-49	2.486017e-46
MsG0480019510.01	MsG0480020722.01	0.811450	6.958883e-51	4.309037e-48
MsG0480019510.01	MsG0480022833.01	0.807947	3.939896e-50	2.223765e-47
MsG0480019510.01	MsG0480023322.01	0.823853	1.107453e-53	9.648585e-51
MsG0480019510.01	MsG0580025023.01	0.800668	1.293606e-48	6.058709e-46
MsG0480019510.01	MsG0580025431.01	0.809888	1.514289e-50	8.997250e-48
MsG0480019510.01	MsG0580025432.01	0.800092	1.695227e-48	7.824323e-46
MsG0480019510.01	MsG0580028302.01	0.810011	1.424767e-50	8.493294e-48
MsG0480019510.01	MsG0580028565.01	0.803063	4.168517e-49	2.074597e-46
MsG0480019510.01	MsG0680031841.01	0.848477	5.979911e-60	1.098922e-56
MsG0480019510.01	MsG0780036480.01	0.806201	9.229027e-50	4.979232e-47
MsG0480019510.01	MsG0780039916.01	0.831376	1.728648e-55	1.872484e-52
MsG0480019510.01	MsG0780039917.01	0.803849	2.864009e-49	1.454576e-46
MsG0480019510.01	MsG0780040022.01	0.835079	2.067312e-56	2.500690e-53
MsG0480019510.01	MsG0780040560.01	0.803150	3.999234e-49	1.994901e-46
MsG0480019510.01	MsG0780041180.01	0.829387	5.296616e-55	5.413225e-52
MsG0480019510.01	MsG0880042635.01	0.800738	1.252096e-48	5.874580e-46
MsG0480019510.01	MsG0880047714.01	0.818112	2.323684e-52	1.723751e-49
MsG0380018004.01	MsG0480019510.01	0.849840	2.497327e-60	4.796669e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019510.01.T01	MTR_4g033015	94.766	363	19	0	1	363	1	363	0.0	681
MsG0480019510.01.T01	MTR_4g033200	94.490	363	20	0	1	363	1	363	0.0	681
MsG0480019510.01.T01	MTR_4g033150	90.634	363	34	0	1	363	1	363	0.0	659
MsG0480019510.01.T01	MTR_4g088200	72.452	363	98	1	1	363	1	361	0.0	552
MsG0480019510.01.T01	MTR_4g033170	77.135	363	77	1	1	363	1	357	0.0	548
MsG0480019510.01.T01	MTR_4g088190	74.451	364	92	1	1	363	1	364	0.0	532
MsG0480019510.01.T01	MTR_4g033085	76.860	363	78	1	1	363	1	357	0.0	525
MsG0480019510.01.T01	MTR_0794s0020	89.558	249	26	0	1	249	1	249	1.14e-166	465
MsG0480019510.01.T01	MTR_7g014570	51.676	358	162	4	6	363	6	352	1.49e-127	370
MsG0480019510.01.T01	MTR_5g074680	52.260	354	161	5	11	362	12	359	5.96e-126	366
MsG0480019510.01.T01	MTR_5g074600	50.423	355	168	5	11	363	11	359	9.54e-124	360
MsG0480019510.01.T01	MTR_5g074580	50.423	355	168	5	11	363	12	360	1.98e-120	352
MsG0480019510.01.T01	MTR_4g088345	51.977	354	161	4	11	363	11	356	3.09e-120	352
MsG0480019510.01.T01	MTR_7g014510	47.486	358	182	4	6	363	6	357	2.25e-119	349
MsG0480019510.01.T01	MTR_1g076940	49.030	361	176	6	6	363	6	361	3.15e-118	347
MsG0480019510.01.T01	MTR_7g024500	48.315	356	172	4	6	361	5	348	2.47e-116	342
MsG0480019510.01.T01	MTR_5g074610	49.292	353	146	3	11	363	7	326	8.47e-116	339
MsG0480019510.01.T01	MTR_7g024520	48.596	356	171	4	6	361	5	348	1.51e-112	332
MsG0480019510.01.T01	MTR_4g079160	47.175	354	178	3	11	363	10	355	1.39e-110	327
MsG0480019510.01.T01	MTR_4g088340	50.147	341	161	4	24	363	1	333	3.77e-109	323
MsG0480019510.01.T01	MTR_5g074540	46.761	355	163	6	11	363	11	341	1.05e-108	322
MsG0480019510.01.T01	MTR_4g038440	35.890	365	220	8	3	363	14	368	1.13e-63	207
MsG0480019510.01.T01	MTR_3g083620	37.318	343	200	9	20	359	27	357	4.70e-62	203
MsG0480019510.01.T01	MTR_0017s0100	35.890	365	220	8	3	363	14	368	4.70e-62	203
MsG0480019510.01.T01	MTR_1g076930	45.082	244	123	6	24	263	1	237	1.01e-60	196
MsG0480019510.01.T01	MTR_0079s0070	36.257	342	204	8	26	363	3	334	1.30e-59	196
MsG0480019510.01.T01	MTR_7g012090	33.431	341	206	10	32	361	40	370	4.49e-48	167
MsG0480019510.01.T01	MTR_8g068870	33.815	346	213	10	18	355	19	356	2.22e-47	164
MsG0480019510.01.T01	MTR_7g012070	32.845	341	208	11	32	361	40	370	5.21e-47	164
MsG0480019510.01.T01	MTR_7g011900	32.544	338	213	9	32	362	40	369	1.14e-46	163
MsG0480019510.01.T01	MTR_1g096310	31.429	350	222	8	8	350	20	358	2.33e-46	162
MsG0480019510.01.T01	MTR_7g011990	31.487	343	207	10	32	362	40	366	2.88e-46	162
MsG0480019510.01.T01	MTR_1g036460	31.532	333	214	7	25	350	30	355	4.06e-46	161
MsG0480019510.01.T01	MTR_1g036490	31.609	348	220	10	25	362	30	369	8.79e-45	158
MsG0480019510.01.T01	MTR_7g012040	32.635	334	212	8	32	361	39	363	1.81e-44	157
MsG0480019510.01.T01	MTR_5g098170	35.224	335	194	14	31	355	33	354	6.46e-44	155
MsG0480019510.01.T01	MTR_7g012020	33.134	335	210	8	32	361	39	364	1.34e-43	155
MsG0480019510.01.T01	MTR_8g068750	32.938	337	212	9	26	355	41	370	1.16e-42	152
MsG0480019510.01.T01	MTR_0591s0010	33.538	325	203	8	26	344	41	358	1.47e-42	152
MsG0480019510.01.T01	MTR_2g055940	31.642	335	214	9	32	361	34	358	1.54e-42	152
MsG0480019510.01.T01	MTR_8g068690	33.231	325	204	8	26	344	40	357	7.57e-42	150
MsG0480019510.01.T01	MTR_7g118320	32.853	347	213	11	9	348	14	347	1.27e-41	149
MsG0480019510.01.T01	MTR_3g092900	32.768	354	204	11	9	349	17	349	2.66e-40	146
MsG0480019510.01.T01	MTR_7g118300	32.047	337	205	9	26	353	42	363	3.75e-40	145
MsG0480019510.01.T01	MTR_2g072790	32.047	337	210	8	31	360	27	351	1.35e-39	144
MsG0480019510.01.T01	MTR_1g036510	30.330	333	218	7	25	350	44	369	1.98e-39	144
MsG0480019510.01.T01	MTR_3g021440	31.804	327	211	8	28	350	38	356	7.07e-38	139
MsG0480019510.01.T01	MTR_4g038440	33.712	264	165	5	3	263	14	270	1.24e-36	134
MsG0480019510.01.T01	MTR_3g021430	30.960	323	211	8	32	350	29	343	6.09e-36	134
MsG0480019510.01.T01	MTR_3g096050	30.747	348	219	11	23	362	24	357	2.35e-35	132
MsG0480019510.01.T01	MTR_8g024160	34.118	255	159	5	98	350	68	315	3.36e-35	131
MsG0480019510.01.T01	MTR_8g068570	32.154	311	171	9	26	330	41	317	6.99e-35	130
MsG0480019510.01.T01	MTR_3g096070	29.855	345	199	12	23	360	24	332	5.58e-33	125
MsG0480019510.01.T01	MTR_8g068730	30.178	338	188	10	26	355	41	338	2.69e-31	121
MsG0480019510.01.T01	MTR_6g078850	28.161	348	230	9	9	348	33	368	2.91e-30	121
MsG0480019510.01.T01	MTR_7g012020	31.535	241	156	6	32	267	39	275	3.96e-28	112
MsG0480019510.01.T01	MTR_1g050220	34.416	154	88	2	194	347	147	287	2.74e-22	95.9
MsG0480019510.01.T01	MTR_3g096050	31.984	247	151	9	23	263	24	259	9.79e-21	90.9
MsG0480019510.01.T01	MTR_1g036510	29.268	246	163	6	25	263	44	285	2.05e-20	90.5
MsG0480019510.01.T01	MTR_8g068690	28.862	246	166	6	26	266	40	281	2.72e-20	90.1
MsG0480019510.01.T01	MTR_7g012020	31.429	210	135	6	32	236	39	244	1.95e-19	87.0
MsG0480019510.01.T01	MTR_8g068600	28.879	232	156	6	38	264	27	254	9.85e-19	85.5
MsG0480019510.01.T01	MTR_8g068740	28.000	275	153	8	26	292	41	278	2.34e-18	84.3
MsG0480019510.01.T01	MTR_8g068620	35.965	114	71	1	153	266	2	113	2.07e-15	72.0
MsG0480019510.01.T01	MTR_4g025570	41.748	103	50	4	6	108	16	108	4.15e-14	71.2
MsG0480019510.01.T01	MTR_4g025570	41.667	96	52	3	265	359	122	214	1.60e-13	69.3
MsG0480019510.01.T01	MTR_8g068760	41.053	95	51	3	263	355	135	226	6.30e-13	68.2
MsG0480019510.01.T01	MTR_1g036510	27.397	219	148	6	25	236	44	258	1.56e-12	67.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019510.01.T01	AT4G35160	33.880	366	209	11	16	362	29	380	1.70e-48	168
MsG0480019510.01.T01	AT4G35150	31.476	359	184	10	16	362	15	323	2.62e-48	166
MsG0480019510.01.T01	AT1G77520	32.267	344	214	9	31	362	44	380	9.95e-43	153
MsG0480019510.01.T01	AT5G54160	33.535	331	193	9	31	350	34	348	1.42e-42	152
MsG0480019510.01.T01	AT1G51990	32.749	342	208	11	33	363	32	362	3.45e-42	151
MsG0480019510.01.T01	AT1G51990	32.749	342	208	11	33	363	32	362	1.39e-41	149
MsG0480019510.01.T01	AT3G53140	33.140	344	202	13	31	360	27	356	1.67e-39	144
MsG0480019510.01.T01	AT1G33030	30.120	332	213	10	31	353	21	342	5.82e-37	137
MsG0480019510.01.T01	AT5G53810	31.124	347	219	9	29	362	38	377	1.24e-36	136
MsG0480019510.01.T01	AT1G77530	32.849	344	212	9	31	362	44	380	3.24e-35	133
MsG0480019510.01.T01	AT1G63140	29.459	370	237	11	9	362	19	380	2.83e-33	127
MsG0480019510.01.T01	AT1G63140	29.459	370	237	11	9	362	39	400	3.81e-33	127
MsG0480019510.01.T01	AT1G76790	30.245	367	214	15	7	355	9	351	8.26e-28	112
MsG0480019510.01.T01	AT1G21130	28.107	338	208	13	31	350	40	360	2.14e-25	105
MsG0480019510.01.T01	AT1G21100	28.274	336	210	12	31	350	40	360	2.76e-25	105
MsG0480019510.01.T01	AT1G62900	35.417	192	119	3	173	362	16	204	2.91e-25	102
MsG0480019510.01.T01	AT1G21110	27.492	331	209	12	31	345	40	355	8.96e-25	104
MsG0480019510.01.T01	AT1G21120	27.083	336	214	12	31	350	40	360	1.63e-23	100
MsG0480019510.01.T01	AT5G37170	31.443	194	127	4	172	362	43	233	1.77e-23	97.8
MsG0480019510.01.T01	AT1G21120	27.083	336	214	12	31	350	88	408	3.09e-23	100
MsG0480019510.01.T01	AT5G37170	31.443	194	127	4	172	362	143	333	3.62e-23	99.0
MsG0480019510.01.T01	AT5G37170	34.104	173	105	5	194	360	14	183	4.56e-22	92.8
MsG0480019510.01.T01	AT1G63140	27.138	269	177	8	9	263	39	302	2.93e-15	75.9
MsG0480019510.01.T01	AT1G33030	27.917	240	158	9	31	263	21	252	3.86e-15	75.1
MsG0480019510.01.T01	AT1G33030	27.917	240	158	9	31	263	21	252	6.08e-15	74.7

Find 65 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGCAAGAGGAGAGACATTT+TGG	0.134700	4:+21470809	MsG0480019510.01.T01:CDS
GCAGTTCTCCAATATCTTTA+AGG	0.188779	4:-21471541	None:intergenic
TGAAACAAATGAGTTGAAAT+TGG	0.205587	4:+21471644	MsG0480019510.01.T01:CDS
ATGATGATGACTTTGTTAAA+TGG	0.247172	4:+21471678	MsG0480019510.01.T01:CDS
TGAATTATCCTTAAAGATAT+TGG	0.263747	4:+21471533	MsG0480019510.01.T01:CDS
TGTATATATGTTTGTATAGA+TGG	0.289789	4:-21470408	None:intergenic
TAGCCATGTGTTTGAAGGTT+TGG	0.322024	4:+21470930	MsG0480019510.01.T01:CDS
TACAGTGGATTCTGCATGAT+TGG	0.329305	4:+21471505	MsG0480019510.01.T01:intron
CTCAGTGAGCCATTTGTTAG+AGG	0.332609	4:-21470761	None:intergenic
TAAAGGACACTAACTTTAGA+AGG	0.352110	4:-21470547	None:intergenic
GCTAATTCTGTAAGAGTCAT+TGG	0.355375	4:-21470505	None:intergenic
AAGAAAGAGAAAAGAAAGAA+TGG	0.376288	4:+21471703	MsG0480019510.01.T01:CDS
GATGAAAATTTGAAATTTGT+TGG	0.393974	4:+21471072	MsG0480019510.01.T01:CDS
GTTGATGTTGGAGGTGGGAC+AGG	0.396355	4:+21470961	MsG0480019510.01.T01:CDS
TGAGGTGAGGAAAAGTTTCA+TGG	0.410589	4:-21471002	None:intergenic
GAGTATAGCCATGTGTTTGA+AGG	0.421443	4:+21470925	MsG0480019510.01.T01:CDS
AGAAAGAGAAAAGAAAGAAT+GGG	0.425852	4:+21471704	MsG0480019510.01.T01:CDS
CCACTGATGAGAAGCATTGA+AGG	0.442792	4:-21470670	None:intergenic
TCCCTGGTTGATGTTGGAGG+TGG	0.450465	4:+21470955	MsG0480019510.01.T01:CDS
CTCAAATCTGCTGTGGAACT+AGG	0.472122	4:+21470451	MsG0480019510.01.T01:CDS
GATGTTGGAGGTGGGACAGG+AGG	0.486832	4:+21470964	MsG0480019510.01.T01:CDS
GTTTGAAGGTTTGGAGTCCC+TGG	0.488507	4:+21470939	MsG0480019510.01.T01:CDS
GATCAAATACTATGCATTTG+AGG	0.496242	4:-21471020	None:intergenic
CAGGTTGTAAGTAACTTGTC+TGG	0.502887	4:+21471048	MsG0480019510.01.T01:CDS
GCAAACGCAAGAGACGATAA+AGG	0.507273	4:-21470564	None:intergenic
TTGGAGTCCCTGGTTGATGT+TGG	0.509648	4:+21470949	MsG0480019510.01.T01:CDS
CACAGCAGATTTGAGTGCCA+TGG	0.511000	4:-21470443	None:intergenic
AGTCTCTTTGAGAGCGCAAG+AGG	0.511386	4:+21470796	MsG0480019510.01.T01:CDS
TGAAGCACTCCGCTAACAAA+TGG	0.512286	4:-21470712	None:intergenic
ACACTGATGAATGGCAAAGA+AGG	0.516027	4:+21470616	MsG0480019510.01.T01:CDS
TGTGGCACTCCTCTAACAAA+TGG	0.518573	4:+21470752	MsG0480019510.01.T01:CDS
ATAGACTTGAAGCCGCATAT+AGG	0.527480	4:-21471771	None:intergenic
GAGTCCCTGGTTGATGTTGG+AGG	0.529815	4:+21470952	MsG0480019510.01.T01:CDS
GAAAATTTGAAATTTGTTGG+TGG	0.531638	4:+21471075	MsG0480019510.01.T01:CDS
TGTTTGTCACCATTTGTTAG+CGG	0.537198	4:+21470703	MsG0480019510.01.T01:CDS
ATCCATGCCGTCTGAACGTG+TGG	0.545741	4:+21470734	MsG0480019510.01.T01:CDS
CCCTGGTTGATGTTGGAGGT+GGG	0.547433	4:+21470956	MsG0480019510.01.T01:CDS
ATACAGCTTTATAAATTCCA+TGG	0.553200	4:+21470426	MsG0480019510.01.T01:CDS
TTGAGTAAAACAGCATCTGC+AGG	0.557051	4:-21471120	None:intergenic
TCCCACCTCCAACATCAACC+AGG	0.558273	4:-21470957	None:intergenic
CATAGTATTTGATCAACCAC+AGG	0.564742	4:+21471029	MsG0480019510.01.T01:CDS
GAGTATGTTTCAAGAGGCCA+TGG	0.566423	4:+21470867	MsG0480019510.01.T01:CDS
GACAAGTTACTTACAACCTG+TGG	0.570330	4:-21471045	None:intergenic
CCTTCAATGCTTCTCATCAG+TGG	0.573536	4:+21470670	MsG0480019510.01.T01:CDS
CAAATGGATTTCAAGTGCAA+TGG	0.577941	4:+21470352	None:intergenic
CAAATGGCTCACTGAGGACA+AGG	0.577988	4:+21470768	MsG0480019510.01.T01:CDS
TGCCACACGTTCAGACGGCA+TGG	0.581336	4:-21470736	None:intergenic
GATTTGAGAATCAGCTGCCA+TGG	0.584730	4:-21470884	None:intergenic
CATGGCACTCAAATCTGCTG+TGG	0.591711	4:+21470444	MsG0480019510.01.T01:CDS
AATACTATGCATTTGAGGTG+AGG	0.599469	4:-21471015	None:intergenic
TTGCGTTTGCTAACACACAA+TGG	0.605432	4:+21470577	MsG0480019510.01.T01:CDS
GGACACTAACTTTAGAAGGG+TGG	0.612811	4:-21470543	None:intergenic
AGGAGTGCCACACGTTCAGA+CGG	0.616722	4:-21470741	None:intergenic
AGTAAAACAGCATCTGCAGG+AGG	0.624714	4:-21471117	None:intergenic
AGGGTGGAGTTTCAAAGATG+AGG	0.627418	4:-21470527	None:intergenic
TGAACTGAGTATGTTTCAAG+AGG	0.628302	4:+21470861	MsG0480019510.01.T01:CDS
TATAAGATTACACCTATATG+CGG	0.630022	4:+21471759	MsG0480019510.01.T01:CDS
AAAGGACACTAACTTTAGAA+GGG	0.634971	4:-21470546	None:intergenic
GAGAAACTTATATTCGACGC+AGG	0.638948	4:+21471726	MsG0480019510.01.T01:CDS
GCAGATGCAATCCACAACCA+TGG	0.642290	4:+21470478	MsG0480019510.01.T01:CDS
ACTCCAAACCTTCAAACACA+TGG	0.661101	4:-21470933	None:intergenic
CTGATGAGAAGCATTGAAGG+AGG	0.666811	4:-21470667	None:intergenic
CCCACCTCCAACATCAACCA+GGG	0.674030	4:-21470956	None:intergenic
GTAAAACAGCATCTGCAGGA+GGG	0.681270	4:-21471116	None:intergenic
CTCTAACAAATGGCTCACTG+AGG	0.728882	4:+21470762	MsG0480019510.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GAGTAAAAGATATATATTTT+GGG	+	Chr4:21471165-21471184	MsG0480019510.01.T01:intron	15.0%
!!!	TGAGTAAAAGATATATATTT+TGG	+	Chr4:21471164-21471183	MsG0480019510.01.T01:intron	15.0%
!!	TGAATTATCCTTAAAGATAT+TGG	+	Chr4:21471533-21471552	MsG0480019510.01.T01:CDS	20.0%
!!	TGTATATATGTTTGTATAGA+TGG	-	Chr4:21470411-21470430	None:intergenic	20.0%
!!!	AGATAAAATCTTTTTTACAG+TGG	+	Chr4:21471490-21471509	MsG0480019510.01.T01:intron	20.0%
!!!	ATCTTTTACTCAATAACATT+TGG	-	Chr4:21471156-21471175	None:intergenic	20.0%
!!!	GATGAAAATTTGAAATTTGT+TGG	+	Chr4:21471072-21471091	MsG0480019510.01.T01:CDS	20.0%
!	AAGAAAGAGAAAAGAAAGAA+TGG	+	Chr4:21471703-21471722	MsG0480019510.01.T01:CDS	25.0%
!	AGAAAGAGAAAAGAAAGAAT+GGG	+	Chr4:21471704-21471723	MsG0480019510.01.T01:CDS	25.0%
!	TATAAGATTACACCTATATG+CGG	+	Chr4:21471759-21471778	MsG0480019510.01.T01:CDS	25.0%
!!	AAAAAAGCTATTTCAGGAAA+TGG	+	Chr4:21471564-21471583	MsG0480019510.01.T01:CDS	25.0%
!!	AAAAAGCTATTTCAGGAAAT+GGG	+	Chr4:21471565-21471584	MsG0480019510.01.T01:CDS	25.0%
!!	AAGAGTAATTTTCGCAATAA+AGG	+	Chr4:21471397-21471416	MsG0480019510.01.T01:intron	25.0%
!!	ATACAGCTTTATAAATTCCA+TGG	+	Chr4:21470426-21470445	MsG0480019510.01.T01:CDS	25.0%
!!	ATGATGATGACTTTGTTAAA+TGG	+	Chr4:21471678-21471697	MsG0480019510.01.T01:CDS	25.0%
!!	TCTGTTGTTTAAGAGTAAAT+TGG	-	Chr4:21471427-21471446	None:intergenic	25.0%
!!	TGAAACAAATGAGTTGAAAT+TGG	+	Chr4:21471644-21471663	MsG0480019510.01.T01:CDS	25.0%
!!!	GAAAATTTGAAATTTGTTGG+TGG	+	Chr4:21471075-21471094	MsG0480019510.01.T01:CDS	25.0%
!!!	TCAACATTTTTTAACAGTAG+TGG	+	Chr4:21471264-21471283	MsG0480019510.01.T01:intron	25.0%
	AGTTAACTACAACTGATGTA+AGG	+	Chr4:21471351-21471370	MsG0480019510.01.T01:intron	30.0%
	ATTTCAGGAAATGGGAAAAA+AGG	+	Chr4:21471573-21471592	MsG0480019510.01.T01:CDS	30.0%
	GATCAAATACTATGCATTTG+AGG	-	Chr4:21471023-21471042	None:intergenic	30.0%
	GTTAACTACAACTGATGTAA+GGG	+	Chr4:21471352-21471371	MsG0480019510.01.T01:intron	30.0%
	TAAAGGACACTAACTTTAGA+AGG	-	Chr4:21470550-21470569	None:intergenic	30.0%
!	AAAGGACACTAACTTTAGAA+GGG	-	Chr4:21470549-21470568	None:intergenic	30.0%
!	AACTGCAAAAAAGCTATTTC+AGG	+	Chr4:21471558-21471577	MsG0480019510.01.T01:CDS	30.0%
	AGGAAATGGGAAAAAAGGAA+AGG	+	Chr4:21471578-21471597	MsG0480019510.01.T01:CDS	35.0%
	AGTTAACTGCTGCTGATATA+AGG	-	Chr4:21471239-21471258	None:intergenic	35.0%
	CATAGTATTTGATCAACCAC+AGG	+	Chr4:21471029-21471048	MsG0480019510.01.T01:CDS	35.0%
	GCAAAAACAACACTGATGAA+TGG	+	Chr4:21470607-21470626	MsG0480019510.01.T01:CDS	35.0%
	GCAGTTCTCCAATATCTTTA+AGG	-	Chr4:21471544-21471563	None:intergenic	35.0%
	GCTAATTCTGTAAGAGTCAT+TGG	-	Chr4:21470508-21470527	None:intergenic	35.0%
	GTTAACTGCTGCTGATATAA+GGG	-	Chr4:21471238-21471257	None:intergenic	35.0%
	TGAACTGAGTATGTTTCAAG+AGG	+	Chr4:21470861-21470880	MsG0480019510.01.T01:CDS	35.0%
!	AATACTATGCATTTGAGGTG+AGG	-	Chr4:21471018-21471037	None:intergenic	35.0%
!	TGTTTGTCACCATTTGTTAG+CGG	+	Chr4:21470703-21470722	MsG0480019510.01.T01:CDS	35.0%
!!!	ACTTTTAAGATTGGCAGATG+TGG	+	Chr4:21471299-21471318	MsG0480019510.01.T01:intron	35.0%
!!!	TAAGAGTCATTGGTTTTCCA+TGG	-	Chr4:21470498-21470517	None:intergenic	35.0%
	ACACTGATGAATGGCAAAGA+AGG	+	Chr4:21470616-21470635	MsG0480019510.01.T01:CDS	40.0%
	ACTCCAAACCTTCAAACACA+TGG	-	Chr4:21470936-21470955	None:intergenic	40.0%
	ATAGACTTGAAGCCGCATAT+AGG	-	Chr4:21471774-21471793	None:intergenic	40.0%
	GACAAGTTACTTACAACCTG+TGG	-	Chr4:21471048-21471067	None:intergenic	40.0%
	GAGAAACTTATATTCGACGC+AGG	+	Chr4:21471726-21471745	MsG0480019510.01.T01:CDS	40.0%
	GAGTATAGCCATGTGTTTGA+AGG	+	Chr4:21470925-21470944	MsG0480019510.01.T01:CDS	40.0%
	TAGCCATGTGTTTGAAGGTT+TGG	+	Chr4:21470930-21470949	MsG0480019510.01.T01:CDS	40.0%
	TGAGGTGAGGAAAAGTTTCA+TGG	-	Chr4:21471005-21471024	None:intergenic	40.0%
	TTGAGTAAAACAGCATCTGC+AGG	-	Chr4:21471123-21471142	None:intergenic	40.0%
!	CAGGTTGTAAGTAACTTGTC+TGG	+	Chr4:21471048-21471067	MsG0480019510.01.T01:CDS	40.0%
!	TACAGTGGATTCTGCATGAT+TGG	+	Chr4:21471505-21471524	MsG0480019510.01.T01:intron	40.0%
!	TTGCGTTTGCTAACACACAA+TGG	+	Chr4:21470577-21470596	MsG0480019510.01.T01:CDS	40.0%
!!	GCCAATCTTAAAAGTGTCAG+CGG	-	Chr4:21471294-21471313	None:intergenic	40.0%
!!	TGTCGCTCGACATTTTTCAA+TGG	-	Chr4:21471332-21471351	None:intergenic	40.0%
!!!	ACCGCTGACACTTTTAAGAT+TGG	+	Chr4:21471290-21471309	MsG0480019510.01.T01:intron	40.0%
!!!	TCATTGGTTTTCCATGGTTG+TGG	-	Chr4:21470492-21470511	None:intergenic	40.0%
!!!	TGCAGATGCTGTTTTACTCA+AGG	+	Chr4:21471122-21471141	MsG0480019510.01.T01:CDS	40.0%
	AGGGTGGAGTTTCAAAGATG+AGG	-	Chr4:21470530-21470549	None:intergenic	45.0%
	AGTAAAACAGCATCTGCAGG+AGG	-	Chr4:21471120-21471139	None:intergenic	45.0%
	CCTTCAATGCTTCTCATCAG+TGG	+	Chr4:21470670-21470689	MsG0480019510.01.T01:CDS	45.0%
	CTCAAATCTGCTGTGGAACT+AGG	+	Chr4:21470451-21470470	MsG0480019510.01.T01:CDS	45.0%
	CTCTAACAAATGGCTCACTG+AGG	+	Chr4:21470762-21470781	MsG0480019510.01.T01:CDS	45.0%
	GAGTATGTTTCAAGAGGCCA+TGG	+	Chr4:21470867-21470886	MsG0480019510.01.T01:CDS	45.0%
	GATTTGAGAATCAGCTGCCA+TGG	-	Chr4:21470887-21470906	None:intergenic	45.0%
	GCAAACGCAAGAGACGATAA+AGG	-	Chr4:21470567-21470586	None:intergenic	45.0%
	GTAAAACAGCATCTGCAGGA+GGG	-	Chr4:21471119-21471138	None:intergenic	45.0%
	TGTGGCACTCCTCTAACAAA+TGG	+	Chr4:21470752-21470771	MsG0480019510.01.T01:CDS	45.0%
!	CGCAAGAGGAGAGACATTTT+GGG	+	Chr4:21470810-21470829	MsG0480019510.01.T01:CDS	45.0%
!	CTCAGTGAGCCATTTGTTAG+AGG	-	Chr4:21470764-21470783	None:intergenic	45.0%
!	GGACACTAACTTTAGAAGGG+TGG	-	Chr4:21470546-21470565	None:intergenic	45.0%
!	TGAAGCACTCCGCTAACAAA+TGG	-	Chr4:21470715-21470734	None:intergenic	45.0%
!!	CCACTGATGAGAAGCATTGA+AGG	-	Chr4:21470673-21470692	None:intergenic	45.0%
!!	CTGATGAGAAGCATTGAAGG+AGG	-	Chr4:21470670-21470689	None:intergenic	45.0%
	CAAATGGCTCACTGAGGACA+AGG	+	Chr4:21470768-21470787	MsG0480019510.01.T01:CDS	50.0%
	CACAGCAGATTTGAGTGCCA+TGG	-	Chr4:21470446-21470465	None:intergenic	50.0%
	CATGGCACTCAAATCTGCTG+TGG	+	Chr4:21470444-21470463	MsG0480019510.01.T01:CDS	50.0%
	GCAGATGCAATCCACAACCA+TGG	+	Chr4:21470478-21470497	MsG0480019510.01.T01:CDS	50.0%
!	AGTCTCTTTGAGAGCGCAAG+AGG	+	Chr4:21470796-21470815	MsG0480019510.01.T01:CDS	50.0%
!	GCGCAAGAGGAGAGACATTT+TGG	+	Chr4:21470809-21470828	MsG0480019510.01.T01:CDS	50.0%
!	GTTTGAAGGTTTGGAGTCCC+TGG	+	Chr4:21470939-21470958	MsG0480019510.01.T01:CDS	50.0%
!	TTGGAGTCCCTGGTTGATGT+TGG	+	Chr4:21470949-21470968	MsG0480019510.01.T01:CDS	50.0%
	ATCCATGCCGTCTGAACGTG+TGG	+	Chr4:21470734-21470753	MsG0480019510.01.T01:CDS	55.0%
	CCCACCTCCAACATCAACCA+GGG	-	Chr4:21470959-21470978	None:intergenic	55.0%
	GTTGATGTTGGAGGTGGGAC+AGG	+	Chr4:21470961-21470980	MsG0480019510.01.T01:CDS	55.0%
	TCCCACCTCCAACATCAACC+AGG	-	Chr4:21470960-21470979	None:intergenic	55.0%
!	CCCTGGTTGATGTTGGAGGT+GGG	+	Chr4:21470956-21470975	MsG0480019510.01.T01:CDS	55.0%
!	GAGTCCCTGGTTGATGTTGG+AGG	+	Chr4:21470952-21470971	MsG0480019510.01.T01:CDS	55.0%
!	TCCCTGGTTGATGTTGGAGG+TGG	+	Chr4:21470955-21470974	MsG0480019510.01.T01:CDS	55.0%
!!	AGGAGTGCCACACGTTCAGA+CGG	-	Chr4:21470744-21470763	None:intergenic	55.0%
	GATGTTGGAGGTGGGACAGG+AGG	+	Chr4:21470964-21470983	MsG0480019510.01.T01:CDS	60.0%
	TGCCACACGTTCAGACGGCA+TGG	-	Chr4:21470739-21470758	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	21470355	21471812	21470355	ID=MsG0480019510.01;Name=MsG0480019510.01
Chr4	mRNA	21470355	21471812	21470355	ID=MsG0480019510.01.T01;Parent=MsG0480019510.01;Name=MsG0480019510.01.T01;_AED=0.49;_eAED=0.50;_QI=0\|0\|0\|1\|1\|1\|2\|0\|363
Chr4	exon	21470355	21471143	21470355	ID=MsG0480019510.01.T01:exon:8187;Parent=MsG0480019510.01.T01
Chr4	exon	21471510	21471812	21471510	ID=MsG0480019510.01.T01:exon:8188;Parent=MsG0480019510.01.T01
Chr4	CDS	21470355	21471143	21470355	ID=MsG0480019510.01.T01:cds;Parent=MsG0480019510.01.T01
Chr4	CDS	21471510	21471812	21471510	ID=MsG0480019510.01.T01:cds;Parent=MsG0480019510.01.T01

Gene Sequence

>MsG0480019510.01.T01

ATGGATTTCAAGTGCAATGGCAGTGAAGAAAGTCAGCTGTATCATGCTCAAATCCATCTATACAAACATATATACAGCTTTATAAATTCCATGGCACTCAAATCTGCTGTGGAACTAGGCATAGCAGATGCAATCCACAACCATGGAAAACCAATGACTCTTACAGAATTAGCCTCATCTTTGAAACTCCACCCTTCTAAAGTTAGTGTCCTTTATCGTCTCTTGCGTTTGCTAACACACAATGGTTTCTTTGCAAAAACAACACTGATGAATGGCAAAGAAGGAGAAGAAGAAACAACATATTCTCTCACTCCTCCTTCAATGCTTCTCATCAGTGGCAAATCAACATGTTTGTCACCATTTGTTAGCGGAGTGCTTCATCCATGCCGTCTGAACGTGTGGCACTCCTCTAACAAATGGCTCACTGAGGACAAGGAACTCAGTCTCTTTGAGAGCGCAAGAGGAGAGACATTTTGGGACTATCTTAACAAAGATTCTGAATCTGATGAACTGAGTATGTTTCAAGAGGCCATGGCAGCTGATTCTCAAATCTTTAACATTGCACTAAAAGAGTATAGCCATGTGTTTGAAGGTTTGGAGTCCCTGGTTGATGTTGGAGGTGGGACAGGAGGTGTCACAAAACTTATCCATGAAACTTTTCCTCACCTCAAATGCATAGTATTTGATCAACCACAGGTTGTAAGTAACTTGTCTGGAGATGAAAATTTGAAATTTGTTGGTGGAGATATGTTCGAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGATTCTGCATGATTGGAATGATGAATTATCCTTAAAGATATTGGAGAACTGCAAAAAAGCTATTTCAGGAAATGGGAAAAAAGGAAAGGTGATTATCATTGACATATCAATTGATGAAATAAGTGACAATCATGAAACAAATGAGTTGAAATTGGATTTTGACTTCATGATGATGACTTTGTTAAATGGAAAAGAAAGAGAAAAGAAAGAATGGGAGAAACTTATATTCGACGCAGGCTTCAGCAGCTATAAGATTACACCTATATGCGGCTTCAAGTCTATCATCGAAGTTTATCCTTAA

Protein sequence

>MsG0480019510.01.T01

MDFKCNGSEESQLYHAQIHLYKHIYSFINSMALKSAVELGIADAIHNHGKPMTLTELASSLKLHPSKVSVLYRLLRLLTHNGFFAKTTLMNGKEGEEETTYSLTPPSMLLISGKSTCLSPFVSGVLHPCRLNVWHSSNKWLTEDKELSLFESARGETFWDYLNKDSESDELSMFQEAMAADSQIFNIALKEYSHVFEGLESLVDVGGGTGGVTKLIHETFPHLKCIVFDQPQVVSNLSGDENLKFVGGDMFESIPPADAVLLKWILHDWNDELSLKILENCKKAISGNGKKGKVIIIDISIDEISDNHETNELKLDFDFMMMTLLNGKEREKKEWEKLIFDAGFSSYKITPICGFKSIIEVYP*