Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040022.01.T01 | AAF00611.1 | 98.387 | 124 | 2 | 0 | 40 | 163 | 1 | 124 | 1.94E-77 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040022.01.T01 | P52914 | 75.806 | 124 | 29 | 1 | 40 | 163 | 1 | 123 | 2.97E-60 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040022.01.T01 | Q9SPM6 | 98.387 | 124 | 2 | 0 | 40 | 163 | 1 | 124 | 9.27e-78 | 248 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001497.01 | MsG0780040022.01 | 0.812152 | 4.895339e-51 | 3.088676e-48 |
| MsG0180002808.01 | MsG0780040022.01 | 0.806928 | 6.481136e-50 | 3.562381e-47 |
| MsG0180003375.01 | MsG0780040022.01 | 0.812941 | 3.291043e-51 | 2.120301e-48 |
| MsG0180005623.01 | MsG0780040022.01 | 0.802468 | 5.529628e-49 | 2.710808e-46 |
| MsG0280011238.01 | MsG0780040022.01 | 0.802263 | 6.095383e-49 | 2.972558e-46 |
| MsG0280011267.01 | MsG0780040022.01 | 0.800640 | 1.311001e-48 | 6.135742e-46 |
| MsG0380011974.01 | MsG0780040022.01 | 0.810734 | 9.946792e-51 | 6.043543e-48 |
| MsG0380013272.01 | MsG0780040022.01 | 0.802647 | 5.081001e-49 | 2.502111e-46 |
| MsG0380013415.01 | MsG0780040022.01 | 0.859539 | 3.857968e-63 | 1.022396e-59 |
| MsG0680030960.01 | MsG0780040022.01 | 0.803480 | 3.416065e-49 | 1.718560e-46 |
| MsG0680030961.01 | MsG0780040022.01 | 0.802168 | 6.375030e-49 | 3.101442e-46 |
| MsG0680031841.01 | MsG0780040022.01 | 0.820521 | 6.566138e-53 | 5.207049e-50 |
| MsG0480018563.01 | MsG0780040022.01 | 0.801333 | 9.458844e-49 | 4.505322e-46 |
| MsG0480019510.01 | MsG0780040022.01 | 0.835079 | 2.067312e-56 | 2.500690e-53 |
| MsG0480019545.01 | MsG0780040022.01 | 0.811466 | 6.904030e-51 | 4.276848e-48 |
| MsG0480020722.01 | MsG0780040022.01 | 0.824612 | 7.345261e-54 | 6.539783e-51 |
| MsG0480020814.01 | MsG0780040022.01 | 0.809782 | 1.595825e-50 | 9.456070e-48 |
| MsG0480022735.01 | MsG0780040022.01 | 0.804263 | 2.349538e-49 | 1.205950e-46 |
| MsG0480022833.01 | MsG0780040022.01 | 0.816849 | 4.472794e-52 | 3.205220e-49 |
| MsG0480023322.01 | MsG0780040022.01 | 0.834504 | 2.884480e-56 | 3.430097e-53 |
| MsG0480023364.01 | MsG0780040022.01 | 0.800672 | 1.291202e-48 | 6.048131e-46 |
| MsG0580025023.01 | MsG0780040022.01 | 0.818711 | 1.699625e-52 | 1.281819e-49 |
| MsG0580025117.01 | MsG0780040022.01 | 0.807488 | 4.933737e-50 | 2.751589e-47 |
| MsG0380018004.01 | MsG0780040022.01 | 0.836254 | 1.041991e-56 | 1.306146e-53 |
| MsG0580026162.01 | MsG0780040022.01 | 0.843767 | 1.144179e-58 | 1.808672e-55 |
| MsG0680030545.01 | MsG0780040022.01 | 0.806163 | 9.398623e-50 | 5.065881e-47 |
| MsG0280007786.01 | MsG0780040022.01 | 0.812960 | 3.259462e-51 | 2.100995e-48 |
| MsG0780036370.01 | MsG0780040022.01 | 0.825898 | 3.647228e-54 | 3.368408e-51 |
| MsG0780037182.01 | MsG0780040022.01 | 0.814792 | 1.286483e-51 | 8.714865e-49 |
| MsG0780038307.01 | MsG0780040022.01 | 0.819599 | 1.067350e-52 | 8.250386e-50 |
| MsG0780039916.01 | MsG0780040022.01 | 0.819070 | 1.408927e-52 | 1.073183e-49 |
| MsG0780040021.01 | MsG0780040022.01 | 0.859405 | 4.231430e-63 | 1.116419e-59 |
| MsG0780040022.01 | MsG0780041180.01 | 0.819042 | 1.429108e-52 | 1.087803e-49 |
| MsG0780040022.01 | MsG0880042633.01 | 0.804377 | 2.224103e-49 | 1.144968e-46 |
| MsG0780040022.01 | MsG0880042635.01 | 0.819921 | 9.011008e-53 | 7.028689e-50 |
| MsG0780040022.01 | MsG0880042644.01 | 0.800859 | 1.182725e-48 | 5.566423e-46 |
| MsG0780040022.01 | MsG0880042810.01 | 0.812849 | 3.445860e-51 | 2.214656e-48 |
| MsG0780040022.01 | MsG0880043481.01 | 0.805336 | 1.402310e-49 | 7.399461e-47 |
| MsG0780040022.01 | MsG0880043551.01 | 0.815312 | 9.858386e-52 | 6.773378e-49 |
| MsG0780040022.01 | MsG0880043989.01 | 0.804308 | 2.298995e-49 | 1.181417e-46 |
| MsG0780040022.01 | MsG0880047714.01 | 0.834370 | 3.116760e-56 | 3.691371e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040022.01.T01 | MTR_7g085180 | 94.495 | 109 | 6 | 0 | 55 | 163 | 16 | 124 | 2.01e-69 | 217 |
| MsG0780040022.01.T01 | MTR_7g085200 | 79.032 | 124 | 25 | 1 | 40 | 163 | 1 | 123 | 7.16e-64 | 202 |
| MsG0780040022.01.T01 | MTR_7g085200 | 79.032 | 124 | 25 | 1 | 40 | 163 | 1 | 123 | 8.18e-64 | 202 |
| MsG0780040022.01.T01 | MTR_7g085120 | 80.645 | 124 | 24 | 0 | 40 | 163 | 1 | 124 | 2.20e-59 | 191 |
| MsG0780040022.01.T01 | MTR_4g036220 | 73.228 | 127 | 32 | 2 | 38 | 163 | 9 | 134 | 2.44e-58 | 187 |
| MsG0780040022.01.T01 | MTR_7g085150 | 72.441 | 127 | 33 | 2 | 38 | 163 | 20 | 145 | 4.68e-58 | 187 |
| MsG0780040022.01.T01 | MTR_7g085150 | 72.441 | 127 | 33 | 2 | 38 | 163 | 20 | 145 | 1.12e-57 | 187 |
| MsG0780040022.01.T01 | MTR_7g085090 | 54.237 | 118 | 54 | 0 | 46 | 163 | 30 | 147 | 1.81e-39 | 139 |
| MsG0780040022.01.T01 | MTR_6g033000 | 50.000 | 110 | 55 | 0 | 54 | 163 | 51 | 160 | 3.61e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040022.01.T01 | AT3G04080 | 46.789 | 109 | 58 | 0 | 55 | 163 | 41 | 149 | 1.17e-26 | 104 |
| MsG0780040022.01.T01 | AT5G18280 | 54.839 | 93 | 42 | 0 | 71 | 163 | 58 | 150 | 1.96e-26 | 103 |
| MsG0780040022.01.T01 | AT1G14240 | 31.496 | 127 | 80 | 3 | 38 | 162 | 29 | 150 | 5.29e-12 | 63.2 |
| MsG0780040022.01.T01 | AT1G14240 | 31.496 | 127 | 80 | 3 | 38 | 162 | 29 | 150 | 5.29e-12 | 63.2 |
| MsG0780040022.01.T01 | AT1G14240 | 31.496 | 127 | 80 | 3 | 38 | 162 | 29 | 150 | 5.29e-12 | 63.2 |
| MsG0780040022.01.T01 | AT1G14240 | 31.496 | 127 | 80 | 3 | 38 | 162 | 29 | 150 | 5.43e-12 | 63.2 |
| MsG0780040022.01.T01 | AT1G14250 | 43.662 | 71 | 38 | 1 | 84 | 152 | 71 | 141 | 2.87e-11 | 61.2 |
Find 41 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAAGCCTAAGGGGTGTTT+TGG | 0.190497 | 7:+72121187 | None:intergenic |
| TCCTCCACCTCTTCAATCTT+TGG | 0.221845 | 7:+72122283 | None:intergenic |
| AAAATCTCTCATTCCACTTT+TGG | 0.222729 | 7:-72121245 | MsG0780040022.01.T01:CDS |
| ATCACTTCCTCCCAATATTT+AGG | 0.236902 | 7:-72121607 | MsG0780040022.01.T01:CDS |
| GTAGGTTGTTTCCTAAATAT+TGG | 0.312837 | 7:+72121596 | None:intergenic |
| TAGGTTGTTTCCTAAATATT+GGG | 0.321694 | 7:+72121597 | None:intergenic |
| AAGTGGCAATGAGTGTAATT+AGG | 0.332469 | 7:+72121653 | None:intergenic |
| CAATTAAAACCGTTAGATCT+TGG | 0.355506 | 7:-72122328 | MsG0780040022.01.T01:CDS |
| GATCTAAGTTCTGATCAAAA+TGG | 0.383146 | 7:+72121479 | None:intergenic |
| CCAAAACACCCCTTAGGCTT+GGG | 0.389215 | 7:-72121187 | MsG0780040022.01.T01:CDS |
| AAACCAGGTTTGAGTGCATA+TGG | 0.392234 | 7:-72121289 | MsG0780040022.01.T01:CDS |
| TATGACAGCGTAAGAGGTTA+AGG | 0.393565 | 7:+72121540 | None:intergenic |
| ATCAAATATGACAGCGTAAG+AGG | 0.408728 | 7:+72121534 | None:intergenic |
| TCCATGTTCTTAATTTGTGT+TGG | 0.446135 | 7:+72121679 | None:intergenic |
| CCCAAAACACCCCTTAGGCT+TGG | 0.470228 | 7:-72121188 | MsG0780040022.01.T01:CDS |
| TATTGGGAGGAAGTGATTGC+AGG | 0.484200 | 7:+72121613 | None:intergenic |
| GAAAACTCACCCCAAGCCTA+AGG | 0.486209 | 7:+72121177 | None:intergenic |
| TACGCTGTCATATTTGATGC+TGG | 0.490658 | 7:-72121529 | MsG0780040022.01.T01:CDS |
| TCTTCTGCTTCCTCCAAAAG+TGG | 0.496021 | 7:+72121232 | None:intergenic |
| AACCAGGTTTGAGTGCATAT+GGG | 0.507093 | 7:-72121288 | MsG0780040022.01.T01:CDS |
| TCCCCATATGCACTCAAACC+TGG | 0.510774 | 7:+72121286 | None:intergenic |
| AAATCTTTCGATTAGTGAGT+AGG | 0.512314 | 7:+72121578 | None:intergenic |
| ATATTTGATGCTGGTAGCAC+TGG | 0.520451 | 7:-72121520 | MsG0780040022.01.T01:CDS |
| ACATAGTGGATTGTGAATCA+TGG | 0.525218 | 7:-72121703 | MsG0780040022.01.T01:intron |
| AAAACTCACCCCAAGCCTAA+GGG | 0.532118 | 7:+72121178 | None:intergenic |
| CTTGGCTTAAATAGAAAACA+TGG | 0.543407 | 7:-72122310 | MsG0780040022.01.T01:CDS |
| CTATTTAAGCCAAGATCTAA+CGG | 0.556224 | 7:+72122319 | None:intergenic |
| TGATATTGAGTTTGTTGACA+AGG | 0.580220 | 7:-72121440 | MsG0780040022.01.T01:intron |
| ACCAGGTTTGAGTGCATATG+GGG | 0.591814 | 7:-72121287 | MsG0780040022.01.T01:CDS |
| TTTGGAGGAAGCAGAAGATG+TGG | 0.592449 | 7:-72121227 | MsG0780040022.01.T01:CDS |
| TCTGATCAAAATGGTAAACA+TGG | 0.600597 | 7:+72121488 | None:intergenic |
| GCTTAAATAGAAAACATGGA+TGG | 0.613259 | 7:-72122306 | MsG0780040022.01.T01:CDS |
| CAAAACACCCCTTAGGCTTG+GGG | 0.614369 | 7:-72121186 | MsG0780040022.01.T01:CDS |
| AACTTAGATCTACTTCACAT+TGG | 0.619361 | 7:-72121466 | MsG0780040022.01.T01:CDS |
| AGCAGAAGATGTGGTTCCTG+AGG | 0.623737 | 7:-72121218 | MsG0780040022.01.T01:CDS |
| GTTGTTTCCTAAATATTGGG+AGG | 0.625266 | 7:+72121600 | None:intergenic |
| ACCAACACAAATTAAGAACA+TGG | 0.628977 | 7:-72121680 | MsG0780040022.01.T01:CDS |
| CTGCACCCAAAACACCCCTT+AGG | 0.632559 | 7:-72121193 | MsG0780040022.01.T01:CDS |
| AAACTCACCCCAAGCCTAAG+GGG | 0.632954 | 7:+72121179 | None:intergenic |
| TGTGTGATGTAGATCAAACC+AGG | 0.641736 | 7:-72121304 | MsG0780040022.01.T01:intron |
| TGGATGGCCAAAGATTGAAG+AGG | 0.715390 | 7:-72122290 | MsG0780040022.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTAATTTTTTTTAACAA+AGG | + | Chr7:72122141-72122160 | None:intergenic | 10.0% |
| !! | TTATTATCAACAGTAAAATT+TGG | + | Chr7:72121416-72121435 | None:intergenic | 15.0% |
| !! | AAGATAGACTCATTATAATA+TGG | + | Chr7:72121714-72121733 | None:intergenic | 20.0% |
| !! | TAAACAAGTTAAATCATTGA+GGG | + | Chr7:72121610-72121629 | None:intergenic | 20.0% |
| !! | TAAATTATGTTATAATTCGC+TGG | + | Chr7:72121739-72121758 | None:intergenic | 20.0% |
| !! | TTAAACAAGTTAAATCATTG+AGG | + | Chr7:72121611-72121630 | None:intergenic | 20.0% |
| ! | ATAATATGGACATATGGTTA+TGG | + | Chr7:72121700-72121719 | None:intergenic | 25.0% |
| ! | CATTAACAAGAGTAAAAAAG+TGG | + | Chr7:72121899-72121918 | None:intergenic | 25.0% |
| ! | CTCATTATAATATGGACATA+TGG | + | Chr7:72121706-72121725 | None:intergenic | 25.0% |
| ! | TAATATGGACATATGGTTAT+GGG | + | Chr7:72121699-72121718 | None:intergenic | 25.0% |
| !! | CAAGGTTAGATTTTCAATAT+TGG | - | Chr7:72122110-72122129 | MsG0780040022.01.T01:intron | 25.0% |
| !! | TAGGTTGTTTCCTAAATATT+GGG | + | Chr7:72121938-72121957 | None:intergenic | 25.0% |
| !!! | ACAGTAAAATTTGGTGTTTA+AGG | + | Chr7:72121407-72121426 | None:intergenic | 25.0% |
| !!! | CAGTAAAATTTGGTGTTTAA+GGG | + | Chr7:72121406-72121425 | None:intergenic | 25.0% |
| !!! | TATTTCATCTTCACTTTTTC+CGG | - | Chr7:72121802-72121821 | MsG0780040022.01.T01:intron | 25.0% |
| !!! | TTCTCGTGGTATAATTTTTT+GGG | - | Chr7:72121300-72121319 | MsG0780040022.01.T01:intron | 25.0% |
| AAATCTTTCGATTAGTGAGT+AGG | + | Chr7:72121957-72121976 | None:intergenic | 30.0% | |
| AACTTAGATCTACTTCACAT+TGG | - | Chr7:72122066-72122085 | MsG0780040022.01.T01:intron | 30.0% | |
| ACCAACACAAATTAAGAACA+TGG | - | Chr7:72121852-72121871 | MsG0780040022.01.T01:intron | 30.0% | |
| CAATTAAAACCGTTAGATCT+TGG | - | Chr7:72121204-72121223 | MsG0780040022.01.T01:CDS | 30.0% | |
| CTATTTAAGCCAAGATCTAA+CGG | + | Chr7:72121216-72121235 | None:intergenic | 30.0% | |
| CTTGGCTTAAATAGAAAACA+TGG | - | Chr7:72121222-72121241 | MsG0780040022.01.T01:CDS | 30.0% | |
| GCTTAAATAGAAAACATGGA+TGG | - | Chr7:72121226-72121245 | MsG0780040022.01.T01:CDS | 30.0% | |
| TCTGATCAAAATGGTAAACA+TGG | + | Chr7:72122047-72122066 | None:intergenic | 30.0% | |
| TTGATCAAATGAGATGTGTT+TGG | + | Chr7:72121512-72121531 | None:intergenic | 30.0% | |
| ! | AAAATCTCTCATTCCACTTT+TGG | - | Chr7:72122287-72122306 | MsG0780040022.01.T01:intron | 30.0% |
| ! | GATCTAAGTTCTGATCAAAA+TGG | + | Chr7:72122056-72122075 | None:intergenic | 30.0% |
| ! | GTAGGTTGTTTCCTAAATAT+TGG | + | Chr7:72121939-72121958 | None:intergenic | 30.0% |
| !! | TCCATGTTCTTAATTTGTGT+TGG | + | Chr7:72121856-72121875 | None:intergenic | 30.0% |
| !! | TGATATTGAGTTTGTTGACA+AGG | - | Chr7:72122092-72122111 | MsG0780040022.01.T01:intron | 30.0% |
| !!! | AGGTTAAGGTTTCTTGTTTT+TGG | + | Chr7:72121981-72122000 | None:intergenic | 30.0% |
| !!! | CTTCTCGTGGTATAATTTTT+TGG | - | Chr7:72121299-72121318 | MsG0780040022.01.T01:intron | 30.0% |
| AAGTGGCAATGAGTGTAATT+AGG | + | Chr7:72121882-72121901 | None:intergenic | 35.0% | |
| ATCAAATATGACAGCGTAAG+AGG | + | Chr7:72122001-72122020 | None:intergenic | 35.0% | |
| ATCACTTCCTCCCAATATTT+AGG | - | Chr7:72121925-72121944 | MsG0780040022.01.T01:intron | 35.0% | |
| ATGAGATGTGTTTGGTAAAC+AGG | + | Chr7:72121504-72121523 | None:intergenic | 35.0% | |
| CACAATCCACTATGTATAAC+CGG | + | Chr7:72121824-72121843 | None:intergenic | 35.0% | |
| GGGAAAACTATCGCAAATAT+TGG | - | Chr7:72121320-72121339 | MsG0780040022.01.T01:intron | 35.0% | |
| ! | CTTTTTCCGGTTATACATAG+TGG | - | Chr7:72121815-72121834 | MsG0780040022.01.T01:intron | 35.0% |
| ! | GTTGTTTCCTAAATATTGGG+AGG | + | Chr7:72121935-72121954 | None:intergenic | 35.0% |
| !! | ACATAGTGGATTGTGAATCA+TGG | - | Chr7:72121829-72121848 | MsG0780040022.01.T01:intron | 35.0% |
| AAACCAGGTTTGAGTGCATA+TGG | - | Chr7:72122243-72122262 | MsG0780040022.01.T01:intron | 40.0% | |
| AACCAGGTTTGAGTGCATAT+GGG | - | Chr7:72122244-72122263 | MsG0780040022.01.T01:intron | 40.0% | |
| ATATTTGATGCTGGTAGCAC+TGG | - | Chr7:72122012-72122031 | MsG0780040022.01.T01:intron | 40.0% | |
| TACGCTGTCATATTTGATGC+TGG | - | Chr7:72122003-72122022 | MsG0780040022.01.T01:intron | 40.0% | |
| TATGACAGCGTAAGAGGTTA+AGG | + | Chr7:72121995-72122014 | None:intergenic | 40.0% | |
| TGTGTGATGTAGATCAAACC+AGG | - | Chr7:72122228-72122247 | MsG0780040022.01.T01:intron | 40.0% | |
| TTGATCGAATCACTCTGACA+AGG | + | Chr7:72121648-72121667 | None:intergenic | 40.0% | |
| ! | TTGGTGTTTAAGGGACTAGT+CGG | + | Chr7:72121397-72121416 | None:intergenic | 40.0% |
| !! | AGAGATTTTGCTGCTTGTTC+AGG | + | Chr7:72122276-72122295 | None:intergenic | 40.0% |
| !! | ATCTCTCATTCCACTTTTGG+AGG | - | Chr7:72122290-72122309 | MsG0780040022.01.T01:intron | 40.0% |
| AAAGATTGAAGAGGTGGAGG+AGG | - | Chr7:72121251-72121270 | MsG0780040022.01.T01:CDS | 45.0% | |
| AAGATTGAAGAGGTGGAGGA+GGG | - | Chr7:72121252-72121271 | MsG0780040022.01.T01:CDS | 45.0% | |
| ACCAGGTTTGAGTGCATATG+GGG | - | Chr7:72122245-72122264 | MsG0780040022.01.T01:intron | 45.0% | |
| ATGGCCAAAGATTGAAGAGG+TGG | - | Chr7:72121245-72121264 | MsG0780040022.01.T01:CDS | 45.0% | |
| CTAACATCGTGATCTTCTCG+TGG | - | Chr7:72121286-72121305 | MsG0780040022.01.T01:CDS | 45.0% | |
| TATTGGGAGGAAGTGATTGC+AGG | + | Chr7:72121922-72121941 | None:intergenic | 45.0% | |
| TCCTCCACCTCTTCAATCTT+TGG | + | Chr7:72121252-72121271 | None:intergenic | 45.0% | |
| TCTTCTGCTTCCTCCAAAAG+TGG | + | Chr7:72122303-72122322 | None:intergenic | 45.0% | |
| TGGATGGCCAAAGATTGAAG+AGG | - | Chr7:72121242-72121261 | MsG0780040022.01.T01:CDS | 45.0% | |
| TTTGGAGGAAGCAGAAGATG+TGG | - | Chr7:72122305-72122324 | MsG0780040022.01.T01:CDS | 45.0% | |
| AGATTGAAGAGGTGGAGGAG+GGG | - | Chr7:72121253-72121272 | MsG0780040022.01.T01:CDS | 50.0% | |
| AGCAGAAGATGTGGTTCCTG+AGG | - | Chr7:72122314-72122333 | MsG0780040022.01.T01:CDS | 50.0% | |
| CAAAACACCCCTTAGGCTTG+GGG | - | Chr7:72122346-72122365 | MsG0780040022.01.T01:CDS | 50.0% | |
| CCAAAACACCCCTTAGGCTT+GGG | - | Chr7:72122345-72122364 | MsG0780040022.01.T01:CDS | 50.0% | |
| GCCAAAGATTGAAGAGGTGG+AGG | - | Chr7:72121248-72121267 | MsG0780040022.01.T01:CDS | 50.0% | |
| TCCCCATATGCACTCAAACC+TGG | + | Chr7:72122249-72122268 | None:intergenic | 50.0% | |
| !! | TGTTTTGGGTGCAGATCCTC+AGG | + | Chr7:72122333-72122352 | None:intergenic | 50.0% |
| !!! | CCAAGCCTAAGGGGTGTTTT+GGG | + | Chr7:72122347-72122366 | None:intergenic | 50.0% |
| CCCAAAACACCCCTTAGGCT+TGG | - | Chr7:72122344-72122363 | MsG0780040022.01.T01:CDS | 55.0% | |
| CTGCACCCAAAACACCCCTT+AGG | - | Chr7:72122339-72122358 | MsG0780040022.01.T01:CDS | 55.0% | |
| !!! | CCCAAGCCTAAGGGGTGTTT+TGG | + | Chr7:72122348-72122367 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 72121183 | 72122371 | 72121183 | ID=MsG0780040022.01;Name=MsG0780040022.01 |
| Chr7 | mRNA | 72121183 | 72122371 | 72121183 | ID=MsG0780040022.01.T01;Parent=MsG0780040022.01;Name=MsG0780040022.01.T01;_AED=0.49;_eAED=0.60;_QI=0|0|0|1|0.5|0.66|3|0|163 |
| Chr7 | exon | 72122291 | 72122371 | 72122291 | ID=MsG0780040022.01.T01:exon:34933;Parent=MsG0780040022.01.T01 |
| Chr7 | exon | 72121441 | 72121719 | 72121441 | ID=MsG0780040022.01.T01:exon:34934;Parent=MsG0780040022.01.T01 |
| Chr7 | exon | 72121183 | 72121314 | 72121183 | ID=MsG0780040022.01.T01:exon:34935;Parent=MsG0780040022.01.T01 |
| Chr7 | CDS | 72122291 | 72122371 | 72122291 | ID=MsG0780040022.01.T01:cds;Parent=MsG0780040022.01.T01 |
| Chr7 | CDS | 72121441 | 72121719 | 72121441 | ID=MsG0780040022.01.T01:cds;Parent=MsG0780040022.01.T01 |
| Chr7 | CDS | 72121183 | 72121314 | 72121183 | ID=MsG0780040022.01.T01:cds;Parent=MsG0780040022.01.T01 |
| Gene Sequence |
| Protein sequence |
